CmoCh16G000870 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh16G000870
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionDUF3143 domain-containing protein
LocationCmo_Chr16: 403770 .. 405968 (-)
RNA-Seq ExpressionCmoCh16G000870
SyntenyCmoCh16G000870
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCCGAGTCCTACCTTGAAAGTGGGAGGACCCTCTCTGTGTGCTTCCATTTCTATCAGGAGTTTGCAAATAAATTAGCGATTTTGATAAGTATACGTATAGATATAGATTGATAGGATAATGTCCATCACTTTTGCTTTTCAGTCTCTCTGTACCAATGTTTTCCCTTCTCCCGTTTCAAATCATCCCGAAATTTCATCGATTTGGCGTCCCATTTCCACTAAACTCCCACAATTACGCAACCCCATCTCTCAATCCTTCAGGAAAAGCTTGAGCATTGTCTCTTCCAAGTCATCCGAGGCAGAGGAGCTCTCTGCTCCAGAGGACGAGTGGCTGAACAAGCTTCCGGAAAAGAAGAAGCCCTTGTACTCTCACAGTTTGCCTTGCATCGAGGCTTGGTTAAAGAACTTGGGATTTTACCAGAGTAACGAGGACCGAGCCGTGTGGCTAATCGAGAAGCCTGAATGGCACGCTCAGCTCTCCCTGGATGTCACCGACCTTTATATAAGGTTCGCAATAGGTCTCCTTTTTGTGATTTTATGACATGGATTTGTGTTTTTCAATCTTGATTTTGGTTCTTTGCCGTTTAATTGCGTTTTCTGATTAGGGTTATTTCGTGAATTGAATTGAGGATGAATCATTCAGTGTTGCCCTACATGTTACTTTCTTATCAGGAAACAAACGTTAGTTTGAGAATTTTGTTGGAGTCCTTTTCCCATGATTTTTCTTTAGGTTGTTTAACTTGTGTAAGATATCGATGGCATTTTGATTCTGGGGTTGTGTTCATTCAGGCATCCATATGACAACTGCTTCGTTTAGGTTGCTTTAAGTGATATGCTTGTTTTATGTATTAAATCTCCGCAGAGAATAGAAAACTGATGCTTTGCAGTTGTCATTATTGAAACTATGGTCAAGATTGAGCTGGGAGAATGGGCAATTCTCTATTATTTGGCCTCTGGATTGGTTATAATAGAGAGGGGGTTTTGTAAATGTTTAAGTAGGATATTGAGCGTGTAAAATTTTGAGGTATTGAGCGGTCAACCATCCACTCTCGAGATTCATGTGGATCAATCGACCTCGAATGCAATTAATTGTCCAGAAAGTGGGTTTGTAAACTTCAAAGGTTGCTTACAACTTCAAATGGAAACGGGATCTGTTCCGTTTTGAAGTGTGAACATTTTGCAGATGCAAAAGAACATTAGTCATTCCTGCAAATGGAGGACCTTAGTTTAGGCTCCTCTGTTACATCCAGTTCAATTTATCCTTGTAATATAGATTTAGTTGCACAGCCTAGCTCAGTCTCTTTTCCACATGCCAGTAACTTTCCCAACAGATGACCAGGGAGAATTGTTATAGCCTGGCTGTTACCGTTGTTTTGAAACTTGATCGGGTTTTAAATTCTCTTGGTTGCTCGTAAACGTCTTGCAGTGCACCAAAATGTTTAAATCACGAATGAAACTTCCCCAACTTTTTGGTTGTGAGAGTAGAGAGAGGCTAGCTGGTGCATTTCAATTCTGGCTTTTGAGTCTGATAATTTGTTATCAATTGTTCTGTAAGAATACTTTCTTTCTTACGATTCGATTGTCAAACACAACTATTACAATATAAGAAAACGATGATAACCTTCCAGCAATCTCGAGAGTGCCAGAAATTGAACCGTTGTTCCATCCAAAATACAAAGCATAGTGATAACAAAGAGACTACTTACTAATACACTACTGCTAGCCTAACAAACCTCCCTAAACGAATTATCCTCAAGTCAATTCCCATGTTACCTCTTCTAGTGAATACACGATTGAATTTGATAGTTACACAATGCACATGTTGGTTTTGCAGGTATCTAAAGAGTGGACCAGGAAATCTTGAGAAAGACGTGGAGAGGAGATTTAGCTATGCACTAAGCAGAGAAGATATTGAGAATGCTGTACTCGGAGGACCATGAACACAGTGTATCATTACTCCATGTATTGCAATCATTCATTCCTTTCTGTCAATATATATATAACATAATTTCTTGATCTATTTTCTTCCCATTCCACAATTGGTAGCAATGAAATCCACTTTTTGTTCACTACACTCTACCTTTCAATGCTGTACTGCTTTGATGAACAGGGGAATAAAATTGATAGAACACATATTCTTCTCCCCACAAAATTTACTGGTACTGATGAACATTAATGCAGTTTGAGAATGGAATTTG

mRNA sequence

CTCCGAGTCCTACCTTGAAAGTGGGAGGACCCTCTCTGTGTGCTTCCATTTCTATCAGGAGTTTGCAAATAAATTAGCGATTTTGATAAGTATACGTATAGATATAGATTGATAGGATAATGTCCATCACTTTTGCTTTTCAGTCTCTCTGTACCAATGTTTTCCCTTCTCCCGTTTCAAATCATCCCGAAATTTCATCGATTTGGCGTCCCATTTCCACTAAACTCCCACAATTACGCAACCCCATCTCTCAATCCTTCAGGAAAAGCTTGAGCATTGTCTCTTCCAAGTCATCCGAGGCAGAGGAGCTCTCTGCTCCAGAGGACGAGTGGCTGAACAAGCTTCCGGAAAAGAAGAAGCCCTTGTACTCTCACAGTTTGCCTTGCATCGAGGCTTGGTTAAAGAACTTGGGATTTTACCAGAGTAACGAGGACCGAGCCGTGTGGCTAATCGAGAAGCCTGAATGGCACGCTCAGCTCTCCCTGGATGTCACCGACCTTTATATAAGGTATCTAAAGAGTGGACCAGGAAATCTTGAGAAAGACGTGGAGAGGAGATTTAGCTATGCACTAAGCAGAGAAGATATTGAGAATGCTGTACTCGGAGGACCATGAACACAGTGTATCATTACTCCATGTATTGCAATCATTCATTCCTTTCTGTCAATATATATATAACATAATTTCTTGATCTATTTTCTTCCCATTCCACAATTGGTAGCAATGAAATCCACTTTTTGTTCACTACACTCTACCTTTCAATGCTGTACTGCTTTGATGAACAGGGGAATAAAATTGATAGAACACATATTCTTCTCCCCACAAAATTTACTGGTACTGATGAACATTAATGCAGTTTGAGAATGGAATTTG

Coding sequence (CDS)

ATGTCCATCACTTTTGCTTTTCAGTCTCTCTGTACCAATGTTTTCCCTTCTCCCGTTTCAAATCATCCCGAAATTTCATCGATTTGGCGTCCCATTTCCACTAAACTCCCACAATTACGCAACCCCATCTCTCAATCCTTCAGGAAAAGCTTGAGCATTGTCTCTTCCAAGTCATCCGAGGCAGAGGAGCTCTCTGCTCCAGAGGACGAGTGGCTGAACAAGCTTCCGGAAAAGAAGAAGCCCTTGTACTCTCACAGTTTGCCTTGCATCGAGGCTTGGTTAAAGAACTTGGGATTTTACCAGAGTAACGAGGACCGAGCCGTGTGGCTAATCGAGAAGCCTGAATGGCACGCTCAGCTCTCCCTGGATGTCACCGACCTTTATATAAGGTATCTAAAGAGTGGACCAGGAAATCTTGAGAAAGACGTGGAGAGGAGATTTAGCTATGCACTAAGCAGAGAAGATATTGAGAATGCTGTACTCGGAGGACCATGA

Protein sequence

MSITFAFQSLCTNVFPSPVSNHPEISSIWRPISTKLPQLRNPISQSFRKSLSIVSSKSSEAEELSAPEDEWLNKLPEKKKPLYSHSLPCIEAWLKNLGFYQSNEDRAVWLIEKPEWHAQLSLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP
Homology
[Close]
BLAST of CmoCh16G000870 vs. ExPASy TrEMBL
Match: A0A6J1E806 (uncharacterized protein LOC111430721 OS=Cucurbita moschata OX=3662 GN=LOC111430721 PE=4 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 5.6e-89
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0 

Query: 1   MSITFAFQSLCTNVFPSPVSNHPEISSIWRPISTKLPQLRNPISQSFRKSLSIVSSKSSE 60
           MSITFAFQSLCTNVFPSPVSNHPEISSIWRPISTKLPQLRNPISQSFRKSLSIVSSKSSE
Sbjct: 1   MSITFAFQSLCTNVFPSPVSNHPEISSIWRPISTKLPQLRNPISQSFRKSLSIVSSKSSE 60

Query: 61  AEELSAPEDEWLNKLPEKKKPLYSHSLPCIEAWLKNLGFYQSNEDRAVWLIEKPEWHAQL 120
           AEELSAPEDEWLNKLPEKKKPLYSHSLPCIEAWLKNLGFYQSNEDRAVWLIEKPEWHAQL
Sbjct: 61  AEELSAPEDEWLNKLPEKKKPLYSHSLPCIEAWLKNLGFYQSNEDRAVWLIEKPEWHAQL 120

Query: 121 SLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP 165
           SLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP
Sbjct: 121 SLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP 164

[Close]
BLAST of CmoCh16G000870 vs. ExPASy TrEMBL
Match: A0A6J1J9Q7 (uncharacterized protein LOC111482568 OS=Cucurbita maxima OX=3661 GN=LOC111482568 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 4.8e-88
Identity = 163/164 (99.39%), Postives = 163/164 (99.39%), Query Frame = 0 

Query: 1   MSITFAFQSLCTNVFPSPVSNHPEISSIWRPISTKLPQLRNPISQSFRKSLSIVSSKSSE 60
           MSITFAFQSLCTNVFPSPVSNHPEISSIWRPISTKLPQLRNPISQSFRKSLSIVSSKSSE
Sbjct: 1   MSITFAFQSLCTNVFPSPVSNHPEISSIWRPISTKLPQLRNPISQSFRKSLSIVSSKSSE 60

Query: 61  AEELSAPEDEWLNKLPEKKKPLYSHSLPCIEAWLKNLGFYQSNEDRAVWLIEKPEWHAQL 120
           AEELSA EDEWLNKLPEKKKPLYSHSLPCIEAWLKNLGFYQSNEDRAVWLIEKPEWHAQL
Sbjct: 61  AEELSASEDEWLNKLPEKKKPLYSHSLPCIEAWLKNLGFYQSNEDRAVWLIEKPEWHAQL 120

Query: 121 SLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP 165
           SLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP
Sbjct: 121 SLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP 164

[Close]
BLAST of CmoCh16G000870 vs. ExPASy TrEMBL
Match: A0A5D3DHV1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold386G001400 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 1.5e-81
Identity = 150/164 (91.46%), Postives = 155/164 (94.51%), Query Frame = 0 

Query: 1   MSITFAFQSLCTNVFPSPVSNHPEISSIWRPISTKLPQLRNPISQSFRKSLSIVSSKSSE 60
           MSITFAF SLC NVFPSP SNH EISSIWRPISTKLPQL NPISQ  RK+ +IVSSKSSE
Sbjct: 1   MSITFAFHSLCNNVFPSPTSNHLEISSIWRPISTKLPQLSNPISQPLRKTFTIVSSKSSE 60

Query: 61  AEELSAPEDEWLNKLPEKKKPLYSHSLPCIEAWLKNLGFYQSNEDRAVWLIEKPEWHAQL 120
           AEELS+PEDEWLNKLPEKKKPLYSHSLPC+EAWLKNLGFYQS EDRA+WLIEKPEWHAQL
Sbjct: 61  AEELSSPEDEWLNKLPEKKKPLYSHSLPCVEAWLKNLGFYQSKEDRAMWLIEKPEWHAQL 120

Query: 121 SLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP 165
           SLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP
Sbjct: 121 SLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP 164

[Close]
BLAST of CmoCh16G000870 vs. ExPASy TrEMBL
Match: A0A1S3AY50 (uncharacterized protein LOC103484146 OS=Cucumis melo OX=3656 GN=LOC103484146 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 1.5e-81
Identity = 150/164 (91.46%), Postives = 155/164 (94.51%), Query Frame = 0 

Query: 1   MSITFAFQSLCTNVFPSPVSNHPEISSIWRPISTKLPQLRNPISQSFRKSLSIVSSKSSE 60
           MSITFAF SLC NVFPSP SNH EISSIWRPISTKLPQL NPISQ  RK+ +IVSSKSSE
Sbjct: 1   MSITFAFHSLCNNVFPSPTSNHLEISSIWRPISTKLPQLSNPISQPLRKTFTIVSSKSSE 60

Query: 61  AEELSAPEDEWLNKLPEKKKPLYSHSLPCIEAWLKNLGFYQSNEDRAVWLIEKPEWHAQL 120
           AEELS+PEDEWLNKLPEKKKPLYSHSLPC+EAWLKNLGFYQS EDRA+WLIEKPEWHAQL
Sbjct: 61  AEELSSPEDEWLNKLPEKKKPLYSHSLPCVEAWLKNLGFYQSKEDRAMWLIEKPEWHAQL 120

Query: 121 SLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP 165
           SLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP
Sbjct: 121 SLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP 164

[Close]
BLAST of CmoCh16G000870 vs. ExPASy TrEMBL
Match: A0A6J1CHI2 (uncharacterized protein LOC111011693 OS=Momordica charantia OX=3673 GN=LOC111011693 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 7.1e-76
Identity = 142/164 (86.59%), Postives = 150/164 (91.46%), Query Frame = 0 

Query: 1   MSITFAFQSLCTNVFPSPVSNHPEISSIWRPISTKLPQLRNPISQSFRKSLSIVSSKSSE 60
           MSI FAF SLC NVFPS  SN+PEIS IWR IS KL Q +NPIS S RKS ++VSS+SSE
Sbjct: 1   MSIAFAFGSLCNNVFPSSASNYPEISPIWRSISPKLRQFQNPISHSLRKSFTLVSSRSSE 60

Query: 61  AEELSAPEDEWLNKLPEKKKPLYSHSLPCIEAWLKNLGFYQSNEDRAVWLIEKPEWHAQL 120
           AEELSAPEDEWL+KLPEKKKPLYSHSLPCIEAWLK+LGFYQS EDRA+WLIEKPEWHAQL
Sbjct: 61  AEELSAPEDEWLSKLPEKKKPLYSHSLPCIEAWLKSLGFYQSKEDRALWLIEKPEWHAQL 120

Query: 121 SLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP 165
           SLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP
Sbjct: 121 SLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP 164

[Close]
BLAST of CmoCh16G000870 vs. NCBI nr
Match: XP_022922878.1 (uncharacterized protein LOC111430721 [Cucurbita moschata] >XP_023552331.1 uncharacterized protein LOC111810028 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 336.7 bits (862), Expect = 1.2e-88
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0 

Query: 1   MSITFAFQSLCTNVFPSPVSNHPEISSIWRPISTKLPQLRNPISQSFRKSLSIVSSKSSE 60
           MSITFAFQSLCTNVFPSPVSNHPEISSIWRPISTKLPQLRNPISQSFRKSLSIVSSKSSE
Sbjct: 1   MSITFAFQSLCTNVFPSPVSNHPEISSIWRPISTKLPQLRNPISQSFRKSLSIVSSKSSE 60

Query: 61  AEELSAPEDEWLNKLPEKKKPLYSHSLPCIEAWLKNLGFYQSNEDRAVWLIEKPEWHAQL 120
           AEELSAPEDEWLNKLPEKKKPLYSHSLPCIEAWLKNLGFYQSNEDRAVWLIEKPEWHAQL
Sbjct: 61  AEELSAPEDEWLNKLPEKKKPLYSHSLPCIEAWLKNLGFYQSNEDRAVWLIEKPEWHAQL 120

Query: 121 SLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP 165
           SLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP
Sbjct: 121 SLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP 164

[Close]
BLAST of CmoCh16G000870 vs. NCBI nr
Match: KAG6576682.1 (hypothetical protein SDJN03_24256, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014732.1 hypothetical protein SDJN02_22361 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 334.3 bits (856), Expect = 5.8e-88
Identity = 163/164 (99.39%), Postives = 163/164 (99.39%), Query Frame = 0 

Query: 1   MSITFAFQSLCTNVFPSPVSNHPEISSIWRPISTKLPQLRNPISQSFRKSLSIVSSKSSE 60
           MSITFAFQSLCTNVFPSPVSNHPEISSIWRPISTKLPQLRNPISQS RKSLSIVSSKSSE
Sbjct: 1   MSITFAFQSLCTNVFPSPVSNHPEISSIWRPISTKLPQLRNPISQSLRKSLSIVSSKSSE 60

Query: 61  AEELSAPEDEWLNKLPEKKKPLYSHSLPCIEAWLKNLGFYQSNEDRAVWLIEKPEWHAQL 120
           AEELSAPEDEWLNKLPEKKKPLYSHSLPCIEAWLKNLGFYQSNEDRAVWLIEKPEWHAQL
Sbjct: 61  AEELSAPEDEWLNKLPEKKKPLYSHSLPCIEAWLKNLGFYQSNEDRAVWLIEKPEWHAQL 120

Query: 121 SLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP 165
           SLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP
Sbjct: 121 SLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP 164

[Close]
BLAST of CmoCh16G000870 vs. NCBI nr
Match: XP_022984153.1 (uncharacterized protein LOC111482568 [Cucurbita maxima])

HSP 1 Score: 333.6 bits (854), Expect = 9.8e-88
Identity = 163/164 (99.39%), Postives = 163/164 (99.39%), Query Frame = 0 

Query: 1   MSITFAFQSLCTNVFPSPVSNHPEISSIWRPISTKLPQLRNPISQSFRKSLSIVSSKSSE 60
           MSITFAFQSLCTNVFPSPVSNHPEISSIWRPISTKLPQLRNPISQSFRKSLSIVSSKSSE
Sbjct: 1   MSITFAFQSLCTNVFPSPVSNHPEISSIWRPISTKLPQLRNPISQSFRKSLSIVSSKSSE 60

Query: 61  AEELSAPEDEWLNKLPEKKKPLYSHSLPCIEAWLKNLGFYQSNEDRAVWLIEKPEWHAQL 120
           AEELSA EDEWLNKLPEKKKPLYSHSLPCIEAWLKNLGFYQSNEDRAVWLIEKPEWHAQL
Sbjct: 61  AEELSASEDEWLNKLPEKKKPLYSHSLPCIEAWLKNLGFYQSNEDRAVWLIEKPEWHAQL 120

Query: 121 SLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP 165
           SLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP
Sbjct: 121 SLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP 164

[Close]
BLAST of CmoCh16G000870 vs. NCBI nr
Match: XP_038880287.1 (uncharacterized protein LOC120071904 [Benincasa hispida])

HSP 1 Score: 319.7 bits (818), Expect = 1.5e-83
Identity = 154/164 (93.90%), Postives = 157/164 (95.73%), Query Frame = 0 

Query: 1   MSITFAFQSLCTNVFPSPVSNHPEISSIWRPISTKLPQLRNPISQSFRKSLSIVSSKSSE 60
           MSITFAFQSLC NVFPSP SNH EISSIWRPISTKLPQL NPISQSFRK+ +IVSSKSSE
Sbjct: 2   MSITFAFQSLCNNVFPSPTSNHSEISSIWRPISTKLPQLSNPISQSFRKTFTIVSSKSSE 61

Query: 61  AEELSAPEDEWLNKLPEKKKPLYSHSLPCIEAWLKNLGFYQSNEDRAVWLIEKPEWHAQL 120
           AEELS PEDEWLNKLPEKKKPLYSHSLPC+EAWLKNLGFYQS EDRAVWLIEKPEWHAQL
Sbjct: 62  AEELSTPEDEWLNKLPEKKKPLYSHSLPCVEAWLKNLGFYQSKEDRAVWLIEKPEWHAQL 121

Query: 121 SLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP 165
           SLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP
Sbjct: 122 SLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP 165

[Close]
BLAST of CmoCh16G000870 vs. NCBI nr
Match: XP_008439322.1 (PREDICTED: uncharacterized protein LOC103484146 [Cucumis melo] >KAA0033736.1 hypothetical protein E6C27_scaffold239G002110 [Cucumis melo var. makuwa] >TYK23028.1 hypothetical protein E5676_scaffold386G001400 [Cucumis melo var. makuwa])

HSP 1 Score: 312.0 bits (798), Expect = 3.1e-81
Identity = 150/164 (91.46%), Postives = 155/164 (94.51%), Query Frame = 0 

Query: 1   MSITFAFQSLCTNVFPSPVSNHPEISSIWRPISTKLPQLRNPISQSFRKSLSIVSSKSSE 60
           MSITFAF SLC NVFPSP SNH EISSIWRPISTKLPQL NPISQ  RK+ +IVSSKSSE
Sbjct: 1   MSITFAFHSLCNNVFPSPTSNHLEISSIWRPISTKLPQLSNPISQPLRKTFTIVSSKSSE 60

Query: 61  AEELSAPEDEWLNKLPEKKKPLYSHSLPCIEAWLKNLGFYQSNEDRAVWLIEKPEWHAQL 120
           AEELS+PEDEWLNKLPEKKKPLYSHSLPC+EAWLKNLGFYQS EDRA+WLIEKPEWHAQL
Sbjct: 61  AEELSSPEDEWLNKLPEKKKPLYSHSLPCVEAWLKNLGFYQSKEDRAMWLIEKPEWHAQL 120

Query: 121 SLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP 165
           SLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP
Sbjct: 121 SLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP 164

[Close]
BLAST of CmoCh16G000870 vs. TAIR 10
Match: AT5G52960.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3143 (InterPro:IPR021489); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 208.8 bits (530), Expect = 3.4e-54
Identity = 96/117 (82.05%), Postives = 108/117 (92.31%), Query Frame = 0 

Query: 48  RKSLSIVSSKSSEAEELSAPEDEWLNKLPEKKKPLYSHSLPCIEAWLKNLGFYQSNEDRA 107
           RK L++VSSKSS+AEE+S  EDEWL KLPEK KPLYSHSLPCIEAWL+ LGFYQS +DRA
Sbjct: 54  RKPLTLVSSKSSDAEEVSDTEDEWLKKLPEKNKPLYSHSLPCIEAWLRKLGFYQSKDDRA 113

Query: 108 VWLIEKPEWHAQLSLDVTDLYIRYLKSGPGNLEKDVERRFSYALSREDIENAVLGGP 165
           VWLI+KP+WHAQLSLDVTDL IRY+KSGPGNLE+D+ERRFSYALSRED ENA+LGGP
Sbjct: 114 VWLIQKPDWHAQLSLDVTDLCIRYMKSGPGNLERDMERRFSYALSREDTENAILGGP 170

The following BLAST results are available for this feature:
BLAST of CmoCh16G000870 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh16G000870 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1E8065.6e-89100.00uncharacterized protein LOC111430721 OS=Cucurbita moschata OX=3662 GN=LOC1114307... [more]
A0A6J1J9Q74.8e-8899.39uncharacterized protein LOC111482568 OS=Cucurbita maxima OX=3661 GN=LOC111482568... [more]
A0A5D3DHV11.5e-8191.46Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3AY501.5e-8191.46uncharacterized protein LOC103484146 OS=Cucumis melo OX=3656 GN=LOC103484146 PE=... [more]
A0A6J1CHI27.1e-7686.59uncharacterized protein LOC111011693 OS=Momordica charantia OX=3673 GN=LOC111011... [more]
BLAST of CmoCh16G000870 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022922878.11.2e-88100.00uncharacterized protein LOC111430721 [Cucurbita moschata] >XP_023552331.1 unchar... [more]
KAG6576682.15.8e-8899.39hypothetical protein SDJN03_24256, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022984153.19.8e-8899.39uncharacterized protein LOC111482568 [Cucurbita maxima][more]
XP_038880287.11.5e-8393.90uncharacterized protein LOC120071904 [Benincasa hispida][more]
XP_008439322.13.1e-8191.46PREDICTED: uncharacterized protein LOC103484146 [Cucumis melo] >KAA0033736.1 hyp... [more]
BLAST of CmoCh16G000870 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G52960.13.4e-5482.05unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021489Protein of unknown function DUF3143PFAMPF11341DUF3143coord: 97..163
e-value: 5.2E-23
score: 81.2
IPR021489Protein of unknown function DUF3143PANTHERPTHR35765OS05G0569200 PROTEINcoord: 43..164

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh16G000870.1CmoCh16G000870.1mRNA