CmoCh16G000090 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh16G000090
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Description60S ribosomal protein L9-like
LocationCmo_Chr16: 71235 .. 73457 (-)
RNA-Seq ExpressionCmoCh16G000090
SyntenyCmoCh16G000090
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACAATAACAAGTTTTCAGTATATAAATCTTCTCACAGAGTTCTTACGCCTTCTGCCGCCGCTTCCGTGAGTGTCTCTCCATCTTCAGAGTAAAAATGAAGACCATTCTTTCATCCGAGACCATGGATATCCCAGATGGGGTTAAAATCAAGGTGAATGCCAAGATCATCGAGGTTGAAGGACCTCGTGGTAAGCTTGTTCGTAACTTCAAGCATCTTAATCTCGACTTTCAACTCATCACTGACGAGGCCACCGGCAAGAAGAAGCTCCGGATCGAAGCATGGTTTGGGTCCAGGAAGACATCCGCCGCTATTCGTACCGCTCTCAGCCATGTTGAGAACCTCATCACAGGCGTCACCAAGGGCTATCGTTACAAGATGCGTTTCGTCTATGCTCACTTTCCCATCAATGCTAGCATCACAAACAGCAGCAAGTCGATTGAGATTCGCAACTTCCTTGGAGAAAAGAAGGTACTCTTCATTTTTAATCGTCATCTGTTTGGTGCTTCGATCTTGTTGCTTAATCAGTGTTTTGTTTGGAAATATATATTCTCAGTAACTTCAGTTTATTAAGAATGACCTTCCTTTTGTTATGTCGGGTTTCTCAAACTTACCCCACTTCCAAATATTGATTTCTATTGTTTCCATTAGTACGTACACTCATGTAAACCTGTGCTGTCACTTGCTTAATCACTTGTTATGTCACTTGTTTGTAAACGCTCTCTGTGATCTGATTTTACTTATTTTATCACTCGTAATCTGCTTAGTGCTAAGATTTTACATGACAAAGTAGGTGGAATTCTGTCTTGTCAGTTTTTTTTTCCCATTTCTTTACTTGCATCGTTTTCAATTCTAGTTCGATGTTTGAGCTTTGAATTACCATTTTTTTTTTAATTTGATACTCCCTCATCACATGATTTCGTCTTCATGTTCACATGGTTTTGGACCAATAGTTCAATTGCTTTGAACTTAGAAGTTTAGTGCGGACAACAGCCCTTCGAATCTCATCCCCAGTTCACTTAGTAATTCATATTTCGGTTCTGCGGCAAAACTAACATACAAAGAAGCCTAAGCCAACGCCAAATCTACATCATCCTTCTATTTAAAATCCAGATTAGAAATTGATTTGGACTTGATATCTGAAAGGTCATCTATCAAAGGTGGGCAAGTTTAGTTCGGATGCTCATGAATATACATAAAAAAATGGTCGTATATCATTCATATGCTGCTCTTGGTGGCAGAGTTTTGTATGGTTTAGGTAATTACGACGGTTGCTTCAATTCTTATTCTCGCCAGTTTTCTAATTACAATTGCACAGCTTGTATCTTATTGGGAGAAAATCAAGTTGGAATTGGAGTTGTTAATATTTTTTAATTCCTTTTTAGCATGGCTTTCCTTTGATTTCGTTCTTTGCTGAAATTTGACTGAGTTGCTTGAACAAGATAGGATATGGACTATATGTTTTTGTGAATGTATTATGAACCATGCCCATAATCGTTGCTTCAGGTGAGAAAGGTGGATATGCTTGATGGAGTTTCCATTACCCGATCTGAGAAAGTCAAAGATGAGTTAGTCTTGGATGGAAATGATATTGAGCTTGTTTCACGGTCTTGTGCCCTTATAAACCAGGTTTGCTTTTATGAAACTCATACGTGCAGGCGCTTTTGCTTCACATAAAAGAAAAAGAGTAAATGGTTCATTCCTCTTTCTTGGCTTCTTTTGCAGAAATGTCATGTGAAGAACAAGGATATACGGAAGTTCCTTGATGGTATCTATGTCAGCGAGAAGGGTACCATTGTTGGAGAAGAAGAGGGATGAATAGAATTGTAGGTTATATCTGCTCTTAGTTTCAAGAGTAGTTTATCTTCTTTGGGAATTGTGTTTTTCATTACTAATTGCGTAATTTTGTGATGTTTCATGGAAGCCCATTAAAACTCTGTTACAGTTTTGTTTTATGGATGTTTTCTATTTTAGGCACAAAGCTTGCTCAGTTACCCTTCTACCATCTTTTTTTTGTTTATTTATTTTTCATGGACGTTTTCGGTTGTAGACACAAAGCTTGCTCTGTTACCCTTCTAGGATCGTGTGTTTTGTTTGTTTTGTGTTTAAAACGGATACTATGTTTGTGCGGGGTTGTATTTTGTTTTCGAAATGTATGCAGACTGCAGTGTGTTGAAGACGGATATGAACATACCATTGCAAGATGGAAGTAGGAAATAGAGTAG

mRNA sequence

ACAATAACAAGTTTTCAGTATATAAATCTTCTCACAGAGTTCTTACGCCTTCTGCCGCCGCTTCCGTGAGTGTCTCTCCATCTTCAGAGTAAAAATGAAGACCATTCTTTCATCCGAGACCATGGATATCCCAGATGGGGTTAAAATCAAGGTGAATGCCAAGATCATCGAGGTTGAAGGACCTCGTGGTAAGCTTGTTCGTAACTTCAAGCATCTTAATCTCGACTTTCAACTCATCACTGACGAGGCCACCGGCAAGAAGAAGCTCCGGATCGAAGCATGGTTTGGGTCCAGGAAGACATCCGCCGCTATTCGTACCGCTCTCAGCCATGTTGAGAACCTCATCACAGGCGTCACCAAGGGCTATCGTTACAAGATGCGTTTCGTCTATGCTCACTTTCCCATCAATGCTAGCATCACAAACAGCAGCAAGTCGATTGAGATTCGCAACTTCCTTGGAGAAAAGAAGGTGAGAAAGGTGGATATGCTTGATGGAGTTTCCATTACCCGATCTGAGAAAGTCAAAGATGAGTTAGTCTTGGATGGAAATGATATTGAGCTTGTTTCACGGTCTTGTGCCCTTATAAACCAGAAATGTCATGTGAAGAACAAGGATATACGGAAGTTCCTTGATGGTATCTATGTCAGCGAGAAGGGTACCATTGTTGGAGAAGAAGAGGGATGAATAGAATTGTAGGTTATATCTGCTCTTAGTTTCAAGAGTAGTTTATCTTCTTTGGGAATTGTGTTTTTCATTACTAATTGCGTAATTTTGTGATGTTTCATGGAAGCCCATTAAAACTCTGTTACAGTTTTGTTTTATGGATGTTTTCTATTTTAGGCACAAAGCTTGCTCAGTTACCCTTCTACCATCTTTTTTTTGTTTATTTATTTTTCATGGACGTTTTCGGTTGTAGACACAAAGCTTGCTCTGTTACCCTTCTAGGATCGTGTGTTTTGTTTGTTTTGTGTTTAAAACGGATACTATGTTTGTGCGGGGTTGTATTTTGTTTTCGAAATGTATGCAGACTGCAGTGTGTTGAAGACGGATATGAACATACCATTGCAAGATGGAAGTAGGAAATAGAGTAG

Coding sequence (CDS)

ATGAAGACCATTCTTTCATCCGAGACCATGGATATCCCAGATGGGGTTAAAATCAAGGTGAATGCCAAGATCATCGAGGTTGAAGGACCTCGTGGTAAGCTTGTTCGTAACTTCAAGCATCTTAATCTCGACTTTCAACTCATCACTGACGAGGCCACCGGCAAGAAGAAGCTCCGGATCGAAGCATGGTTTGGGTCCAGGAAGACATCCGCCGCTATTCGTACCGCTCTCAGCCATGTTGAGAACCTCATCACAGGCGTCACCAAGGGCTATCGTTACAAGATGCGTTTCGTCTATGCTCACTTTCCCATCAATGCTAGCATCACAAACAGCAGCAAGTCGATTGAGATTCGCAACTTCCTTGGAGAAAAGAAGGTGAGAAAGGTGGATATGCTTGATGGAGTTTCCATTACCCGATCTGAGAAAGTCAAAGATGAGTTAGTCTTGGATGGAAATGATATTGAGCTTGTTTCACGGTCTTGTGCCCTTATAAACCAGAAATGTCATGTGAAGAACAAGGATATACGGAAGTTCCTTGATGGTATCTATGTCAGCGAGAAGGGTACCATTGTTGGAGAAGAAGAGGGATGA

Protein sequence

MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRIEAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSSKSIEIRNFLGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLDGIYVSEKGTIVGEEEG
Homology
[Close]
BLAST of CmoCh16G000090 vs. ExPASy Swiss-Prot
Match: P30707 (60S ribosomal protein L9 OS=Pisum sativum OX=3888 GN=RPL9 PE=2 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 4.3e-93
Identity = 174/194 (89.69%), Postives = 184/194 (94.85%), Query Frame = 0 

Query: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60
           MKTILSSETM+IPDGV IKVNAK+IEVEGPRGKLVR+FKHLNLDF LITDE  GKKKL+I
Sbjct: 1   MKTILSSETMNIPDGVTIKVNAKVIEVEGPRGKLVRDFKHLNLDFDLITDE-NGKKKLKI 60

Query: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSSKSIEIRNF 120
           +AWFGSRKTSAAIRTALSHVENLITGVTKG+RYKMRFVYA FPINASITN +KSIEIRNF
Sbjct: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGFRYKMRFVYADFPINASITNDNKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVD+LDGVSI RSEKVKDE+VLDGNDIELVSRSCALINQKCHVK KDIRKFLD
Sbjct: 121 LGEKKVRKVDLLDGVSIIRSEKVKDEVVLDGNDIELVSRSCALINQKCHVKKKDIRKFLD 180

Query: 181 GIYVSEKGTIVGEE 195
           GIYVSEKG +V EE
Sbjct: 181 GIYVSEKGAVVVEE 193

[Close]
BLAST of CmoCh16G000090 vs. ExPASy Swiss-Prot
Match: P49209 (60S ribosomal protein L9-1 OS=Arabidopsis thaliana OX=3702 GN=RPL9B PE=1 SV=3)

HSP 1 Score: 331.3 bits (848), Expect = 7.6e-90
Identity = 165/194 (85.05%), Postives = 180/194 (92.78%), Query Frame = 0 

Query: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60
           MKTILSSETMDIPD V IKV+AK+IEVEGPRGKLVR+FKHLNLDFQLI D  TGKKKL+I
Sbjct: 1   MKTILSSETMDIPDSVTIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLIKDPETGKKKLKI 60

Query: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSSKSIEIRNF 120
           ++WFG+RKTSA+IRTALSHV+NLI+GVT+G+RYKMRFVYAHFPINASI    KSIEIRNF
Sbjct: 61  DSWFGTRKTSASIRTALSHVDNLISGVTRGFRYKMRFVYAHFPINASIGGDGKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180
           LGEKKVRKV+MLDGV+I RSEKVKDE+VLDGNDIELVSRSCALINQKCHVK KDIRKFLD
Sbjct: 121 LGEKKVRKVEMLDGVTIVRSEKVKDEIVLDGNDIELVSRSCALINQKCHVKKKDIRKFLD 180

Query: 181 GIYVSEKGTIVGEE 195
           GIYVSEK  IV EE
Sbjct: 181 GIYVSEKSKIVEEE 194

[Close]
BLAST of CmoCh16G000090 vs. ExPASy Swiss-Prot
Match: Q9SZX9 (60S ribosomal protein L9-2 OS=Arabidopsis thaliana OX=3702 GN=RPL9D PE=2 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 5.0e-89
Identity = 161/194 (82.99%), Postives = 180/194 (92.78%), Query Frame = 0 

Query: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60
           MKTILSSETMDIPDGV IKVNAK+IEVEGPRGKL R+FKHLNLDFQLI D+ TGK++L+I
Sbjct: 1   MKTILSSETMDIPDGVAIKVNAKVIEVEGPRGKLTRDFKHLNLDFQLIKDQVTGKRQLKI 60

Query: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSSKSIEIRNF 120
           ++WFGSRKTSA+IRTALSHV+NLI GVT+G+ Y+MRFVYAHFPINASI  ++KSIEIRNF
Sbjct: 61  DSWFGSRKTSASIRTALSHVDNLIAGVTQGFLYRMRFVYAHFPINASIDGNNKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180
           LGEKKVRKV+MLDGV I RSEKVKDE++L+GNDIELVSRSCALINQKCHVK KDIRKFLD
Sbjct: 121 LGEKKVRKVEMLDGVKIVRSEKVKDEIILEGNDIELVSRSCALINQKCHVKKKDIRKFLD 180

Query: 181 GIYVSEKGTIVGEE 195
           GIYVSEKG I  EE
Sbjct: 181 GIYVSEKGKIAVEE 194

[Close]
BLAST of CmoCh16G000090 vs. ExPASy Swiss-Prot
Match: P49210 (60S ribosomal protein L9 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL9 PE=2 SV=3)

HSP 1 Score: 313.5 bits (802), Expect = 1.6e-84
Identity = 155/190 (81.58%), Postives = 176/190 (92.63%), Query Frame = 0 

Query: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60
           MKTIL+SETM+IP+GV ++V AK++ VEGPRGKL RNFKHLNLDFQL+     G +KL++
Sbjct: 1   MKTILASETMEIPEGVTVQVAAKVVTVEGPRGKLTRNFKHLNLDFQLL----EGGRKLQV 60

Query: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSSKSIEIRNF 120
           +AWFG+R+T AAIRTA+SHV+NLITGVTKGYRYKMRFVYAHFPINASITNS+ +IEIRNF
Sbjct: 61  DAWFGTRRTMAAIRTAISHVQNLITGVTKGYRYKMRFVYAHFPINASITNSNTAIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDML+GV+I RSEKVKDELVLDGNDIELVSRS ALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLEGVTILRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTI 191
           GIYVS+KGTI
Sbjct: 181 GIYVSDKGTI 186

[Close]
BLAST of CmoCh16G000090 vs. ExPASy Swiss-Prot
Match: Q90YW0 (60S ribosomal protein L9 OS=Ictalurus punctatus OX=7998 GN=rpl9 PE=2 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 4.5e-58
Identity = 114/194 (58.76%), Postives = 143/194 (73.71%), Query Frame = 0 

Query: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60
           MKTILS++T+DIPD V + +  + + V+GPRG L R F H+NL+ +L+  +   +KKLR+
Sbjct: 1   MKTILSTQTVDIPDNVDVTLKGRTVSVKGPRGVLRREFNHINLELRLLGKK---QKKLRV 60

Query: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSSKSIEIRNF 120
           + W+G+RK  A +RT  SHV+N+I GVT G+RYKMR VYAHFPIN  I  +   +EIRNF
Sbjct: 61  DKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQETGSLVEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180
           LGEK +R+V M  GV+   S   KDELVL+GNDIELVS S ALI Q   VKNKDIRKFLD
Sbjct: 121 LGEKYIRRVRMRPGVNCALSAAQKDELVLEGNDIELVSNSAALIQQATTVKNKDIRKFLD 180

Query: 181 GIYVSEKGTIVGEE 195
           GIYVSEKGT+V  E
Sbjct: 181 GIYVSEKGTVVEPE 191

[Close]
BLAST of CmoCh16G000090 vs. ExPASy TrEMBL
Match: A0A6J1J3I2 (60S ribosomal protein L9 OS=Cucurbita maxima OX=3661 GN=LOC111483062 PE=3 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 1.3e-103
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0 

Query: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60
           MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI
Sbjct: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60

Query: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSSKSIEIRNF 120
           EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSSKSIEIRNF
Sbjct: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSSKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTIVGEEEG 197
           GIYVSEKGTIVGEEEG
Sbjct: 181 GIYVSEKGTIVGEEEG 196

[Close]
BLAST of CmoCh16G000090 vs. ExPASy TrEMBL
Match: A0A6J1E4H2 (60S ribosomal protein L9-like OS=Cucurbita moschata OX=3662 GN=LOC111430709 PE=3 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 1.3e-103
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0 

Query: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60
           MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI
Sbjct: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60

Query: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSSKSIEIRNF 120
           EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSSKSIEIRNF
Sbjct: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSSKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTIVGEEEG 197
           GIYVSEKGTIVGEEEG
Sbjct: 181 GIYVSEKGTIVGEEEG 196

[Close]
BLAST of CmoCh16G000090 vs. ExPASy TrEMBL
Match: A0A6J1HZM6 (60S ribosomal protein L9-like OS=Cucurbita maxima OX=3661 GN=LOC111467681 PE=3 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 1.4e-102
Identity = 194/196 (98.98%), Postives = 196/196 (100.00%), Query Frame = 0 

Query: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60
           MKTILSSE+MDIPDGVKIKV+AKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI
Sbjct: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60

Query: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSSKSIEIRNF 120
           EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSSKSIEIRNF
Sbjct: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSSKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTIVGEEEG 197
           GIYVSEKGTIVGEEEG
Sbjct: 181 GIYVSEKGTIVGEEEG 196

[Close]
BLAST of CmoCh16G000090 vs. ExPASy TrEMBL
Match: A0A6J1G231 (60S ribosomal protein L9-like OS=Cucurbita moschata OX=3662 GN=LOC111449954 PE=3 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 4.1e-102
Identity = 193/196 (98.47%), Postives = 195/196 (99.49%), Query Frame = 0 

Query: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60
           MKTILSSE+MDIPDGVKIKV+AKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI
Sbjct: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60

Query: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSSKSIEIRNF 120
           EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITN SKSIEIRNF
Sbjct: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTIVGEEEG 197
           GIYVSEKGTIVGEEEG
Sbjct: 181 GIYVSEKGTIVGEEEG 196

[Close]
BLAST of CmoCh16G000090 vs. ExPASy TrEMBL
Match: A0A1S3CHZ9 (60S ribosomal protein L9-like OS=Cucumis melo OX=3656 GN=LOC103501171 PE=3 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 2.2e-100
Identity = 190/195 (97.44%), Postives = 193/195 (98.97%), Query Frame = 0 

Query: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60
           MKTILSSE+MDIPDGVKIKV+AKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI
Sbjct: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60

Query: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSSKSIEIRNF 120
           EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITN SKSIEIRNF
Sbjct: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTIVGEEE 196
           GIYVSEKGTIVG +E
Sbjct: 181 GIYVSEKGTIVGADE 195

[Close]
BLAST of CmoCh16G000090 vs. NCBI nr
Match: XP_022922852.1 (60S ribosomal protein L9-like [Cucurbita moschata] >XP_022984942.1 60S ribosomal protein L9 [Cucurbita maxima] >XP_023553154.1 60S ribosomal protein L9 [Cucurbita pepo subsp. pepo] >KAG6576613.1 60S ribosomal protein L9, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 385.6 bits (989), Expect = 2.6e-103
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0 

Query: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60
           MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI
Sbjct: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60

Query: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSSKSIEIRNF 120
           EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSSKSIEIRNF
Sbjct: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSSKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTIVGEEEG 197
           GIYVSEKGTIVGEEEG
Sbjct: 181 GIYVSEKGTIVGEEEG 196

[Close]
BLAST of CmoCh16G000090 vs. NCBI nr
Match: XP_022968434.1 (60S ribosomal protein L9-like [Cucurbita maxima])

HSP 1 Score: 382.1 bits (980), Expect = 2.9e-102
Identity = 194/196 (98.98%), Postives = 196/196 (100.00%), Query Frame = 0 

Query: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60
           MKTILSSE+MDIPDGVKIKV+AKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI
Sbjct: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60

Query: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSSKSIEIRNF 120
           EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSSKSIEIRNF
Sbjct: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSSKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTIVGEEEG 197
           GIYVSEKGTIVGEEEG
Sbjct: 181 GIYVSEKGTIVGEEEG 196

[Close]
BLAST of CmoCh16G000090 vs. NCBI nr
Match: XP_022945825.1 (60S ribosomal protein L9-like [Cucurbita moschata] >XP_023542544.1 60S ribosomal protein L9-like [Cucurbita pepo subsp. pepo] >KAG6574272.1 60S ribosomal protein L9, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013341.1 60S ribosomal protein L9, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 380.6 bits (976), Expect = 8.4e-102
Identity = 193/196 (98.47%), Postives = 195/196 (99.49%), Query Frame = 0 

Query: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60
           MKTILSSE+MDIPDGVKIKV+AKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI
Sbjct: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60

Query: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSSKSIEIRNF 120
           EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITN SKSIEIRNF
Sbjct: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTIVGEEEG 197
           GIYVSEKGTIVGEEEG
Sbjct: 181 GIYVSEKGTIVGEEEG 196

[Close]
BLAST of CmoCh16G000090 vs. NCBI nr
Match: XP_038897570.1 (60S ribosomal protein L9-like [Benincasa hispida])

HSP 1 Score: 374.8 bits (961), Expect = 4.6e-100
Identity = 190/195 (97.44%), Postives = 194/195 (99.49%), Query Frame = 0 

Query: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60
           MKTILSSE+MDIPDGVKIKV+AKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI
Sbjct: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60

Query: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSSKSIEIRNF 120
           EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITN+SKSIEIRNF
Sbjct: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNNSKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTIVGEEE 196
           GIYVSEKGTIVG +E
Sbjct: 181 GIYVSEKGTIVGGDE 195

[Close]
BLAST of CmoCh16G000090 vs. NCBI nr
Match: XP_008462900.1 (PREDICTED: 60S ribosomal protein L9-like [Cucumis melo] >XP_016902942.1 PREDICTED: 60S ribosomal protein L9-like [Cucumis melo] >KAA0056651.1 60S ribosomal protein L9-like [Cucumis melo var. makuwa] >TYK04612.1 60S ribosomal protein L9-like [Cucumis melo var. makuwa])

HSP 1 Score: 374.8 bits (961), Expect = 4.6e-100
Identity = 190/195 (97.44%), Postives = 193/195 (98.97%), Query Frame = 0 

Query: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60
           MKTILSSE+MDIPDGVKIKV+AKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI
Sbjct: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60

Query: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSSKSIEIRNF 120
           EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITN SKSIEIRNF
Sbjct: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTIVGEEE 196
           GIYVSEKGTIVG +E
Sbjct: 181 GIYVSEKGTIVGADE 195

[Close]
BLAST of CmoCh16G000090 vs. TAIR 10
Match: AT1G33120.1 (Ribosomal protein L6 family )

HSP 1 Score: 331.3 bits (848), Expect = 5.4e-91
Identity = 165/194 (85.05%), Postives = 180/194 (92.78%), Query Frame = 0 

Query: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60
           MKTILSSETMDIPD V IKV+AK+IEVEGPRGKLVR+FKHLNLDFQLI D  TGKKKL+I
Sbjct: 1   MKTILSSETMDIPDSVTIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLIKDPETGKKKLKI 60

Query: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSSKSIEIRNF 120
           ++WFG+RKTSA+IRTALSHV+NLI+GVT+G+RYKMRFVYAHFPINASI    KSIEIRNF
Sbjct: 61  DSWFGTRKTSASIRTALSHVDNLISGVTRGFRYKMRFVYAHFPINASIGGDGKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180
           LGEKKVRKV+MLDGV+I RSEKVKDE+VLDGNDIELVSRSCALINQKCHVK KDIRKFLD
Sbjct: 121 LGEKKVRKVEMLDGVTIVRSEKVKDEIVLDGNDIELVSRSCALINQKCHVKKKDIRKFLD 180

Query: 181 GIYVSEKGTIVGEE 195
           GIYVSEK  IV EE
Sbjct: 181 GIYVSEKSKIVEEE 194

[Close]
BLAST of CmoCh16G000090 vs. TAIR 10
Match: AT1G33140.1 (Ribosomal protein L6 family )

HSP 1 Score: 331.3 bits (848), Expect = 5.4e-91
Identity = 165/194 (85.05%), Postives = 180/194 (92.78%), Query Frame = 0 

Query: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60
           MKTILSSETMDIPD V IKV+AK+IEVEGPRGKLVR+FKHLNLDFQLI D  TGKKKL+I
Sbjct: 1   MKTILSSETMDIPDSVTIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLIKDPETGKKKLKI 60

Query: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSSKSIEIRNF 120
           ++WFG+RKTSA+IRTALSHV+NLI+GVT+G+RYKMRFVYAHFPINASI    KSIEIRNF
Sbjct: 61  DSWFGTRKTSASIRTALSHVDNLISGVTRGFRYKMRFVYAHFPINASIGGDGKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180
           LGEKKVRKV+MLDGV+I RSEKVKDE+VLDGNDIELVSRSCALINQKCHVK KDIRKFLD
Sbjct: 121 LGEKKVRKVEMLDGVTIVRSEKVKDEIVLDGNDIELVSRSCALINQKCHVKKKDIRKFLD 180

Query: 181 GIYVSEKGTIVGEE 195
           GIYVSEK  IV EE
Sbjct: 181 GIYVSEKSKIVEEE 194

[Close]
BLAST of CmoCh16G000090 vs. TAIR 10
Match: AT4G10450.1 (Ribosomal protein L6 family )

HSP 1 Score: 328.6 bits (841), Expect = 3.5e-90
Identity = 161/194 (82.99%), Postives = 180/194 (92.78%), Query Frame = 0 

Query: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60
           MKTILSSETMDIPDGV IKVNAK+IEVEGPRGKL R+FKHLNLDFQLI D+ TGK++L+I
Sbjct: 1   MKTILSSETMDIPDGVAIKVNAKVIEVEGPRGKLTRDFKHLNLDFQLIKDQVTGKRQLKI 60

Query: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSSKSIEIRNF 120
           ++WFGSRKTSA+IRTALSHV+NLI GVT+G+ Y+MRFVYAHFPINASI  ++KSIEIRNF
Sbjct: 61  DSWFGSRKTSASIRTALSHVDNLIAGVTQGFLYRMRFVYAHFPINASIDGNNKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180
           LGEKKVRKV+MLDGV I RSEKVKDE++L+GNDIELVSRSCALINQKCHVK KDIRKFLD
Sbjct: 121 LGEKKVRKVEMLDGVKIVRSEKVKDEIILEGNDIELVSRSCALINQKCHVKKKDIRKFLD 180

Query: 181 GIYVSEKGTIVGEE 195
           GIYVSEKG I  EE
Sbjct: 181 GIYVSEKGKIAVEE 194

The following BLAST results are available for this feature:
BLAST of CmoCh16G000090 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P307074.3e-9389.6960S ribosomal protein L9 OS=Pisum sativum OX=3888 GN=RPL9 PE=2 SV=1[more]
P492097.6e-9085.0560S ribosomal protein L9-1 OS=Arabidopsis thaliana OX=3702 GN=RPL9B PE=1 SV=3[more]
Q9SZX95.0e-8982.9960S ribosomal protein L9-2 OS=Arabidopsis thaliana OX=3702 GN=RPL9D PE=2 SV=1[more]
P492101.6e-8481.5860S ribosomal protein L9 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL9 PE=2 S... [more]
Q90YW04.5e-5858.7660S ribosomal protein L9 OS=Ictalurus punctatus OX=7998 GN=rpl9 PE=2 SV=1[more]
BLAST of CmoCh16G000090 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1J3I21.3e-103100.0060S ribosomal protein L9 OS=Cucurbita maxima OX=3661 GN=LOC111483062 PE=3 SV=1[more]
A0A6J1E4H21.3e-103100.0060S ribosomal protein L9-like OS=Cucurbita moschata OX=3662 GN=LOC111430709 PE=3... [more]
A0A6J1HZM61.4e-10298.9860S ribosomal protein L9-like OS=Cucurbita maxima OX=3661 GN=LOC111467681 PE=3 S... [more]
A0A6J1G2314.1e-10298.4760S ribosomal protein L9-like OS=Cucurbita moschata OX=3662 GN=LOC111449954 PE=3... [more]
A0A1S3CHZ92.2e-10097.4460S ribosomal protein L9-like OS=Cucumis melo OX=3656 GN=LOC103501171 PE=3 SV=1[more]
BLAST of CmoCh16G000090 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022922852.12.6e-103100.0060S ribosomal protein L9-like [Cucurbita moschata] >XP_022984942.1 60S ribosomal... [more]
XP_022968434.12.9e-10298.9860S ribosomal protein L9-like [Cucurbita maxima][more]
XP_022945825.18.4e-10298.4760S ribosomal protein L9-like [Cucurbita moschata] >XP_023542544.1 60S ribosomal... [more]
XP_038897570.14.6e-10097.4460S ribosomal protein L9-like [Benincasa hispida][more]
XP_008462900.14.6e-10097.44PREDICTED: 60S ribosomal protein L9-like [Cucumis melo] >XP_016902942.1 PREDICTE... [more]
BLAST of CmoCh16G000090 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G33120.15.4e-9185.05Ribosomal protein L6 family [more]
AT1G33140.15.4e-9185.05Ribosomal protein L6 family [more]
AT4G10450.13.5e-9082.99Ribosomal protein L6 family [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000702Ribosomal protein L6PIRSFPIRSF002162RPL6p_RPL6a_RPL9e_RPL9ocoord: 1..190
e-value: 2.4E-30
score: 103.3
IPR000702Ribosomal protein L6PANTHERPTHR1165560S/50S RIBOSOMAL PROTEIN L6/L9coord: 1..194
IPR020040Ribosomal protein L6, alpha-beta domainPFAMPF00347Ribosomal_L6coord: 103..181
e-value: 2.1E-12
score: 47.5
coord: 12..90
e-value: 1.1E-11
score: 45.3
IPR036789Ribosomal protein L6, alpha-beta domain superfamilyGENE3D3.90.930.12coord: 1..90
e-value: 9.7E-30
score: 104.9
IPR036789Ribosomal protein L6, alpha-beta domain superfamilyGENE3D3.90.930.12coord: 91..195
e-value: 6.5E-52
score: 175.9
IPR036789Ribosomal protein L6, alpha-beta domain superfamilySUPERFAMILY56053Ribosomal protein L6coord: 91..187
IPR036789Ribosomal protein L6, alpha-beta domain superfamilySUPERFAMILY56053Ribosomal protein L6coord: 1..90
NoneNo IPR availablePANTHERPTHR11655:SF4060S RIBOSOMAL PROTEIN L9-LIKEcoord: 1..194
IPR002359Ribosomal protein L6, conserved site-2PROSITEPS00700RIBOSOMAL_L6_2coord: 166..187

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh16G000090.1CmoCh16G000090.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0002181 cytoplasmic translation
biological_process GO:0006412 translation
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome