CmoCh15G014640 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh15G014640
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Protein of unknown function (DUF565)
Location	Cmo_Chr15: 9942949 .. 9943416 (-)
RNA-Seq Expression	CmoCh15G014640
Synteny	CmoCh15G014640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCACAATCTGCAAGTTTAGTCTCTACTGGCCTCCTAAATTATGCCTTTACTCCTCAAAAGAATGCTTCATATTGGAGATATGATGTGATAAAATCACGGCCATCCCCTCGTAGTCTTTGTATCAAAGCTGTGCAAGATACCGGAGGCCCTCGTAGGTTGGTTGATATCATTAGACTGGTGCCTGAGCTCTCGAGAAATTACTTTCGAAGTCCTTCGAGGAGGGCTCTCTTTGGAGGAATCTCTTTGTTGGGTGGGTTTTATGTGGCACAAACTATATCATTGTCGTTTGGAGCTTTGGGAGTAAATGATGTGATTGCTGCTGTGGTATGTGTTCTTCTTACTGAATATGTTACTCGCTTTTATTACAGTCGACCCAAAGTAACCTTCCCTGTTGCTCTGCTAAACAACTTCAAAATGGGATTCACTTATGGTCTTTTCATTGATGCTTTCAAACTTGCTAGTTAA

mRNA sequence

ATGGCACAATCTGCAAGTTTAGTCTCTACTGGCCTCCTAAATTATGCCTTTACTCCTCAAAAGAATGCTTCATATTGGAGATATGATGTGATAAAATCACGGCCATCCCCTCGTAGTCTTTGTATCAAAGCTGTGCAAGATACCGGAGGCCCTCGTAGGTTGGTTGATATCATTAGACTGGTGCCTGAGCTCTCGAGAAATTACTTTCGAAGTCCTTCGAGGAGGGCTCTCTTTGGAGGAATCTCTTTGTTGGGTGGGTTTTATGTGGCACAAACTATATCATTGTCGTTTGGAGCTTTGGGAGTAAATGATGTGATTGCTGCTGTGGTATGTGTTCTTCTTACTGAATATGTTACTCGCTTTTATTACAGTCGACCCAAAGTAACCTTCCCTGTTGCTCTGCTAAACAACTTCAAAATGGGATTCACTTATGGTCTTTTCATTGATGCTTTCAAACTTGCTAGTTAA

Coding sequence (CDS)

ATGGCACAATCTGCAAGTTTAGTCTCTACTGGCCTCCTAAATTATGCCTTTACTCCTCAAAAGAATGCTTCATATTGGAGATATGATGTGATAAAATCACGGCCATCCCCTCGTAGTCTTTGTATCAAAGCTGTGCAAGATACCGGAGGCCCTCGTAGGTTGGTTGATATCATTAGACTGGTGCCTGAGCTCTCGAGAAATTACTTTCGAAGTCCTTCGAGGAGGGCTCTCTTTGGAGGAATCTCTTTGTTGGGTGGGTTTTATGTGGCACAAACTATATCATTGTCGTTTGGAGCTTTGGGAGTAAATGATGTGATTGCTGCTGTGGTATGTGTTCTTCTTACTGAATATGTTACTCGCTTTTATTACAGTCGACCCAAAGTAACCTTCCCTGTTGCTCTGCTAAACAACTTCAAAATGGGATTCACTTATGGTCTTTTCATTGATGCTTTCAAACTTGCTAGTTAA

Protein sequence

MAQSASLVSTGLLNYAFTPQKNASYWRYDVIKSRPSPRSLCIKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS

Homology

[Close]

BLAST of CmoCh15G014640 vs. ExPASy Swiss-Prot
Match: Q1XDS2 (Uncharacterized protein ycf20 OS=Pyropia yezoensis OX=2788 GN=ycf20 PE=3 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 6.8e-09
Identity = 40/97 (41.24%), Postives = 55/97 (56.70%), Query Frame = 0


Query: 60  LVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVT 119
           L+  L+   + S S     G ISLL GF+++  +S   G  G   +IAA + V  TE  +
Sbjct: 13  LIKNLNNKLYYSLSELTT-GLISLLLGFFISTGLSTIPGQTGDWGIIAASLIVAATELTS 72

Query: 120 RFYYSRPK-VTFPVALLNNFKMGFTYGLFIDAFKLAS 156
           +  YS  K +   + L NNFK+G TYGLF+DAFKL S
Sbjct: 73  KIVYSSHKQLNIKINLFNNFKIGITYGLFVDAFKLGS 108

[Close]

BLAST of CmoCh15G014640 vs. ExPASy Swiss-Prot
Match: P72983 (Ycf20-like protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=sll1509 PE=3 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.0e-08
Identity = 37/105 (35.24%), Postives = 55/105 (52.38%), Query Frame = 0


Query: 53  RLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCV 112
           RL  I+ +  +    +FR+P RR     +S L GF+V   ++ + G     DV+ A   +
Sbjct: 5   RLNTIVEVRGQQLSQFFRNPWRRISLSLLSFLFGFFVGTAVATTAGQNSQWDVVCAAFIL 64

Query: 113 LLTEYVTRFYYSR--PKVTFPVALLNNFKMGFTYGLFIDAFKLAS 156
           L  E V R++Y R          +LN FKMG +Y LF++AFKL S
Sbjct: 65  LFCELVNRWFYRRGVKMGDLQAEVLNIFKMGVSYSLFLEAFKLGS 109

[Close]

BLAST of CmoCh15G014640 vs. ExPASy Swiss-Prot
Match: P51214 (Uncharacterized protein ycf20 OS=Porphyra purpurea OX=2787 GN=ycf20 PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 7.6e-08
Identity = 36/78 (46.15%), Postives = 48/78 (61.54%), Query Frame = 0


Query: 79  GGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYS-RPKVTFPVALLNN 138
           G ISLL GF+++  +S   G  G   +IAA + V   E V++  YS + K    + LLNN
Sbjct: 31  GLISLLLGFFISTGLSTIPGQTGDWGIIAASLIVAAIELVSKIVYSNKKKYGVRINLLNN 90

Query: 139 FKMGFTYGLFIDAFKLAS 156
            K+G TYGLF+DAFKL S
Sbjct: 91  LKIGITYGLFVDAFKLGS 108

[Close]

BLAST of CmoCh15G014640 vs. ExPASy Swiss-Prot
Match: Q9MUL5 (Uncharacterized protein ycf20 OS=Mesostigma viride OX=41882 GN=ycf20 PE=3 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 3.9e-04
Identity = 30/82 (36.59%), Postives = 44/82 (53.66%), Query Frame = 0


Query: 83  LLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSR----PKVTFPVALL--- 142
           LL GF++A  ++  FG  G  DV+ A + V + E +    YS+     K  F ++ L   
Sbjct: 35  LLLGFFIATVLATVFGQTGDWDVLVAGILVAMIEILGNKMYSKKYISKKQVFDISFLSLI 94

Query: 143 --NNFKMGFTYGLFIDAFKLAS 156
             N  K+G  +GLF+DAFKL S
Sbjct: 95  GINYIKIGLIFGLFVDAFKLGS 116

[Close]

BLAST of CmoCh15G014640 vs. ExPASy TrEMBL
Match: A0A6J1ESY7 (uncharacterized protein ycf20 OS=Cucurbita moschata OX=3662 GN=LOC111435716 PE=3 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 4.5e-80
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MAQSASLVSTGLLNYAFTPQKNASYWRYDVIKSRPSPRSLCIKAVQDTGGPRRLVDIIRL 60
           MAQSASLVSTGLLNYAFTPQKNASYWRYDVIKSRPSPRSLCIKAVQDTGGPRRLVDIIRL
Sbjct: 1   MAQSASLVSTGLLNYAFTPQKNASYWRYDVIKSRPSPRSLCIKAVQDTGGPRRLVDIIRL 60

Query: 61  VPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTR 120
           VPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTR
Sbjct: 61  VPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTR 120

Query: 121 FYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS 156
           FYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS
Sbjct: 121 FYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS 155

[Close]

BLAST of CmoCh15G014640 vs. ExPASy TrEMBL
Match: A0A6J1I440 (uncharacterized protein ycf20 OS=Cucurbita maxima OX=3661 GN=LOC111468994 PE=3 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.1e-78
Identity = 154/155 (99.35%), Postives = 154/155 (99.35%), Query Frame = 0


Query: 1   MAQSASLVSTGLLNYAFTPQKNASYWRYDVIKSRPSPRSLCIKAVQDTGGPRRLVDIIRL 60
           MAQSASLVSTGLLNYAFTPQKNASYWRYDVIKSRPSPRSL IKAVQDTGGPRRLVDIIRL
Sbjct: 1   MAQSASLVSTGLLNYAFTPQKNASYWRYDVIKSRPSPRSLGIKAVQDTGGPRRLVDIIRL 60

Query: 61  VPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTR 120
           VPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTR
Sbjct: 61  VPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTR 120

Query: 121 FYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS 156
           FYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS
Sbjct: 121 FYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS 155

[Close]

BLAST of CmoCh15G014640 vs. ExPASy TrEMBL
Match: A0A0A0KPS1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G172820 PE=3 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 1.2e-72
Identity = 143/156 (91.67%), Postives = 148/156 (94.87%), Query Frame = 0


Query: 1   MAQSASLVSTGLLNYAFTPQKNASYWRYDVIKSRPS-PRSLCIKAVQDTGGPRRLVDIIR 60
           MAQSASLV T LLNY FTP+ N SYWRYD++KSRPS PRS  +KAVQDTGGPRRLVDIIR
Sbjct: 1   MAQSASLVHTSLLNYGFTPKMNPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIR 60

Query: 61  LVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVT 120
           LVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVT
Sbjct: 61  LVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVT 120

Query: 121 RFYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS 156
           RFYYSRPKVTFP+ALLNNFKMGFTYGLFIDAFKLAS
Sbjct: 121 RFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS 156

[Close]

BLAST of CmoCh15G014640 vs. ExPASy TrEMBL
Match: A0A1S3CT33 (uncharacterized protein ycf20 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103504644 PE=3 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 1.7e-71
Identity = 141/156 (90.38%), Postives = 148/156 (94.87%), Query Frame = 0


Query: 1   MAQSASLVSTGLLNYAFTPQKNASYWRYDVIKSRPS-PRSLCIKAVQDTGGPRRLVDIIR 60
           MAQS SLV TGLLNY F+ + N+SYWRYD++KSRPS PRS  +KAVQDTGGPRRLVDIIR
Sbjct: 1   MAQSTSLVHTGLLNYGFSLKMNSSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIR 60

Query: 61  LVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVT 120
           LVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVT
Sbjct: 61  LVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVT 120

Query: 121 RFYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS 156
           RFYYSRPKVTFP+ALLNNFKMGFTYGLFIDAFKLAS
Sbjct: 121 RFYYSRPKVTFPIALLNNFKMGFTYGLFIDAFKLAS 156

[Close]

BLAST of CmoCh15G014640 vs. ExPASy TrEMBL
Match: A0A5D3BMH1 (Ycf20-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1728G00540 PE=3 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 7.7e-64
Identity = 127/135 (94.07%), Postives = 131/135 (97.04%), Query Frame = 0


Query: 22  NASYWRYDVIKSRPS-PRSLCIKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGG 81
           N SYWRYD++KSRPS PRS  +KAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGG
Sbjct: 2   NPSYWRYDMVKSRPSPPRSFRVKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGG 61

Query: 82  ISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPVALLNNFKM 141
           ISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFP+ALLNNFKM
Sbjct: 62  ISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTFPIALLNNFKM 121

Query: 142 GFTYGLFIDAFKLAS 156
           GFTYGLFIDAFKLAS
Sbjct: 122 GFTYGLFIDAFKLAS 136

[Close]

BLAST of CmoCh15G014640 vs. NCBI nr
Match: XP_022928979.1 (uncharacterized protein ycf20 [Cucurbita moschata] >XP_022928980.1 uncharacterized protein ycf20 [Cucurbita moschata])

HSP 1 Score: 307.0 bits (785), Expect = 9.3e-80
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MAQSASLVSTGLLNYAFTPQKNASYWRYDVIKSRPSPRSLCIKAVQDTGGPRRLVDIIRL 60
           MAQSASLVSTGLLNYAFTPQKNASYWRYDVIKSRPSPRSLCIKAVQDTGGPRRLVDIIRL
Sbjct: 1   MAQSASLVSTGLLNYAFTPQKNASYWRYDVIKSRPSPRSLCIKAVQDTGGPRRLVDIIRL 60

Query: 61  VPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTR 120
           VPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTR
Sbjct: 61  VPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTR 120

Query: 121 FYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS 156
           FYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS
Sbjct: 121 FYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS 155

[Close]

BLAST of CmoCh15G014640 vs. NCBI nr
Match: XP_023549885.1 (uncharacterized protein LOC111808248 [Cucurbita pepo subsp. pepo] >XP_023549886.1 uncharacterized protein LOC111808248 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 306.2 bits (783), Expect = 1.6e-79
Identity = 154/155 (99.35%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MAQSASLVSTGLLNYAFTPQKNASYWRYDVIKSRPSPRSLCIKAVQDTGGPRRLVDIIRL 60
           MAQSASLVSTGLLNYAFTPQKNASYWRYDVIKSRPSPRSLCIKAVQDTGGPRRLVDIIRL
Sbjct: 1   MAQSASLVSTGLLNYAFTPQKNASYWRYDVIKSRPSPRSLCIKAVQDTGGPRRLVDIIRL 60

Query: 61  VPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTR 120
           VPE+SRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTR
Sbjct: 61  VPEISRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTR 120

Query: 121 FYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS 156
           FYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS
Sbjct: 121 FYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS 155

[Close]

BLAST of CmoCh15G014640 vs. NCBI nr
Match: KAG6579671.1 (hypothetical protein SDJN03_24119, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 305.1 bits (780), Expect = 3.5e-79
Identity = 153/155 (98.71%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MAQSASLVSTGLLNYAFTPQKNASYWRYDVIKSRPSPRSLCIKAVQDTGGPRRLVDIIRL 60
           MAQSASLVSTGLLNYAFTPQKNASYWRYD+IKSRPSPRSLCIKAVQDTGGPRRLVDIIRL
Sbjct: 1   MAQSASLVSTGLLNYAFTPQKNASYWRYDMIKSRPSPRSLCIKAVQDTGGPRRLVDIIRL 60

Query: 61  VPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTR 120
           VPE+SRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTR
Sbjct: 61  VPEISRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTR 120

Query: 121 FYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS 156
           FYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS
Sbjct: 121 FYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS 155

[Close]

BLAST of CmoCh15G014640 vs. NCBI nr
Match: XP_022969949.1 (uncharacterized protein ycf20 [Cucurbita maxima] >XP_022969950.1 uncharacterized protein ycf20 [Cucurbita maxima])

HSP 1 Score: 302.4 bits (773), Expect = 2.3e-78
Identity = 154/155 (99.35%), Postives = 154/155 (99.35%), Query Frame = 0


Query: 1   MAQSASLVSTGLLNYAFTPQKNASYWRYDVIKSRPSPRSLCIKAVQDTGGPRRLVDIIRL 60
           MAQSASLVSTGLLNYAFTPQKNASYWRYDVIKSRPSPRSL IKAVQDTGGPRRLVDIIRL
Sbjct: 1   MAQSASLVSTGLLNYAFTPQKNASYWRYDVIKSRPSPRSLGIKAVQDTGGPRRLVDIIRL 60

Query: 61  VPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTR 120
           VPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTR
Sbjct: 61  VPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTR 120

Query: 121 FYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS 156
           FYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS
Sbjct: 121 FYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS 155

[Close]

BLAST of CmoCh15G014640 vs. NCBI nr
Match: KAG7017120.1 (putative NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 294.3 bits (752), Expect = 6.2e-76
Identity = 146/149 (97.99%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 7   LVSTGLLNYAFTPQKNASYWRYDVIKSRPSPRSLCIKAVQDTGGPRRLVDIIRLVPELSR 66
           +VSTGLLNYAFTPQKNASYWRYD+IKSRPSPRSLCIKAVQDTGGPRRLVDIIRLVPE+SR
Sbjct: 106 VVSTGLLNYAFTPQKNASYWRYDMIKSRPSPRSLCIKAVQDTGGPRRLVDIIRLVPEISR 165

Query: 67  NYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRP 126
           NYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRP
Sbjct: 166 NYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRP 225

Query: 127 KVTFPVALLNNFKMGFTYGLFIDAFKLAS 156
           KVTFPVALLNNFKMGFTYGLFIDAFKLAS
Sbjct: 226 KVTFPVALLNNFKMGFTYGLFIDAFKLAS 254

[Close]

BLAST of CmoCh15G014640 vs. TAIR 10
Match: AT5G43050.1 (Protein of unknown function (DUF565) )

HSP 1 Score: 201.8 bits (512), Expect = 3.9e-52
Identity = 109/158 (68.99%), Postives = 124/158 (78.48%), Query Frame = 0


Query: 1   MAQSASLVSTGLLNYAFTPQKNASYWRYDVIKSRPSPR-SLCIKAVQDTGG--PRRLVDI 60
           MA S S +ST L +      +  S+  +     +   R +  I+A+Q+T G  PRRL+DI
Sbjct: 1   MAHSLSFISTNLNSLVLNHHQCQSFGTFVSSPFKRKRRFARSIRALQETEGPTPRRLIDI 60

Query: 61  IRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEY 120
           IR VPE+SRNYF+ PSRR LFGGISLLGGFYVAQTISLSFGALGVNDVIAAV+CVLLTEY
Sbjct: 61  IRSVPEISRNYFKKPSRRTLFGGISLLGGFYVAQTISLSFGALGVNDVIAAVLCVLLTEY 120

Query: 121 VTRFYYSRPKVTFPVALLNNFKMGFTYGLFIDAFKLAS 156
           VTRFYYSR  VTFP+ALLNNFKMGFTYGLFIDAFKLAS
Sbjct: 121 VTRFYYSRTTVTFPIALLNNFKMGFTYGLFIDAFKLAS 158

[Close]

BLAST of CmoCh15G014640 vs. TAIR 10
Match: AT1G65420.1 (Protein of unknown function (DUF565) )

HSP 1 Score: 43.9 bits (102), Expect = 1.4e-04
Identity = 29/80 (36.25%), Postives = 39/80 (48.75%), Query Frame = 0


Query: 83  LLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRP-------KVTFPVALL 142
           LL GFY A  ++   G  G  DV+ A + V   E +    Y +P       K+   V  +
Sbjct: 118 LLLGFYTANALATILGQTGDWDVLVAGIVVAAIEGIGMLMYKKPSSSMFSGKLQSFVVFM 177

Query: 143 NNFKMGFTYGLFIDAFKLAS 156
           N +K G   GLF+DAFKL S
Sbjct: 178 NFWKAGVCLGLFVDAFKLGS 197

The following BLAST results are available for this feature:

BLAST of CmoCh15G014640 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1XDS2	6.8e-09	41.24	Uncharacterized protein ycf20 OS=Pyropia yezoensis OX=2788 GN=ycf20 PE=3 SV=1	[more]
P72983	2.0e-08	35.24	Ycf20-like protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN...	[more]
P51214	7.6e-08	46.15	Uncharacterized protein ycf20 OS=Porphyra purpurea OX=2787 GN=ycf20 PE=3 SV=1	[more]
Q9MUL5	3.9e-04	36.59	Uncharacterized protein ycf20 OS=Mesostigma viride OX=41882 GN=ycf20 PE=3 SV=1	[more]

BLAST of CmoCh15G014640 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ESY7	4.5e-80	100.00	uncharacterized protein ycf20 OS=Cucurbita moschata OX=3662 GN=LOC111435716 PE=3...	[more]
A0A6J1I440	1.1e-78	99.35	uncharacterized protein ycf20 OS=Cucurbita maxima OX=3661 GN=LOC111468994 PE=3 S...	[more]
A0A0A0KPS1	1.2e-72	91.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G172820 PE=3 SV=1	[more]
A0A1S3CT33	1.7e-71	90.38	uncharacterized protein ycf20 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103504644...	[more]
A0A5D3BMH1	7.7e-64	94.07	Ycf20-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]

BLAST of CmoCh15G014640 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022928979.1	9.3e-80	100.00	uncharacterized protein ycf20 [Cucurbita moschata] >XP_022928980.1 uncharacteriz...	[more]
XP_023549885.1	1.6e-79	99.35	uncharacterized protein LOC111808248 [Cucurbita pepo subsp. pepo] >XP_023549886....	[more]
KAG6579671.1	3.5e-79	98.71	hypothetical protein SDJN03_24119, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022969949.1	2.3e-78	99.35	uncharacterized protein ycf20 [Cucurbita maxima] >XP_022969950.1 uncharacterized...	[more]
KAG7017120.1	6.2e-76	97.99	putative NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12, partial ...	[more]

BLAST of CmoCh15G014640 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43050.1	3.9e-52	68.99	Protein of unknown function (DUF565)	[more]
AT1G65420.1	1.4e-04	36.25	Protein of unknown function (DUF565)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007572	Uncharacterised protein family Ycf20	PFAM	PF04483	DUF565	coord: 101..155 e-value: 1.3E-18 score: 67.1
IPR007572	Uncharacterised protein family Ycf20	PANTHER	PTHR33787	FAMILY NOT NAMED	coord: 1..155
None	No IPR available	PANTHER	PTHR33787:SF5	YCF20-LIKE PROTEIN	coord: 1..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh15G014640.1	CmoCh15G014640.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane