CmoCh15G014120 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh15G014120
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	8-amino-7-oxononanoate synthase isoform X2
Location	Cmo_Chr15: 9621721 .. 9624259 (-)
RNA-Seq Expression	CmoCh15G014120
Synteny	CmoCh15G014120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GCACTAAAATTAGGATCTTCCAACGTTTCTTCTTTTTCGACATCCTTTGCCGCCGCCATTTCCCGCTCCCGCTCCCGTCGCTGTTCTGGCGCCACCGGCAGGTGCCTCTAGCTTTCTCTATCGTTCGTAGACCGAGTTTTCGGCGAAGATTGTAAGACTTTCCGTAGTCTATCAATCTCGCTTCAAGTTCGTGGATTCAATAGTATTACCGAAGGAAATAACTGATGCGTTGGGTTGTTTTATGTGCTAGTAATATTTGGCTGCATTATTTAGGGACTGTTCTTGTGGCATTTCCTTTCAAAGGTTCAAACCTCAGTTCACGCAGCTATGGAAATTTGGTGAGGGCTTCATGTGTTGTTTATTTATTTGGGAGTGGCCCTTGTTCTCTTTGAAGTATCTGATGAGTTTTGATTAGTAATGCTTTGTTGTTTGAGTTTGTGGATATTTCTGATATGCTAGAATGCTGCATTGTACAACTTGAATTTTGTTTGATATTTTGTGGGCTTGTTAATGTTTTGATGTATTGGATTTTGTTTAGCTAACTCAATAGGATCCTTATGTCATAGCTGTGAATTCGACTTGGTTTAGGTTAAAATGCCTCGACCTTCAATTGTACTCTTGTAAAACAAAGGAATAGCATTTTGATGTATGTAATTTAAGCTATAATGAAAGAAATATGGTGCTTGGTACTTTTTCCCTTATTTGCTTGGCTTGTCCGGGTACGTATTTGTAACAGCCCAATCCTACCACTAGTAGATATTGTCTTATTTGGGCTTTCCCTTCTAGGCTTCCCCTCAAGGTTTTAAACGCATATGTTACGGAGAGGTTTCCACATCCTTATAAGAAATACTTTATGTAACAACCAGCTTTTTAGTTGGTATCAGAGCCAGGTATCGAGCGATGTACCAGCGAGGAGGCTGAACCCAGAAGGGGGTGGACACGAGGCGGTGTGCCAACAAGGACGTTGGGCCCTAAAGGGGGGTGGATTGGGGGGTCTCACATCGATTGAAGAAGGGAACGAGTGCCAGCGAGGGTGGATTGTGAGATCCCACATCGATTAGGGATAAGAACGAAACATTCTTTATAAGGGTGTGGTAACCTCTCCATAATAGACGCGTTTTAAAAACCTTGAGGGGAAGCCTGAAATGGAAAGCCCAAAGAAAACAATATCGGCTAACAGTGGGCTTGGGCAGTTATATACTTGGTAGTTAGTTTAGAATAGCTACTTGTTTCCATGTCATGGCCTATTTGGTTTGGTTAAGTGTTTGATTCTACATGTGAATTCATCTTTATTGAGGCTCTAGTGTAGAGCTTATTATGATGTATGTGTTTGGTGCCATTATCATAACTTAATTTTATTTTTTTCTTTATCTCATGTATTCTTGAAATTTATTTCTTTATTAGAGATTAAGAAAGAGTTGCATCTTTATGTGGAACTTGAGTTCTTGGGGTGGACAGTCTAGTTTTGATGTGTTGATTGTATGGAGTAGTTTCTAAATTGAAGTCTTAGTTAAGTCGTTATATTCATAAGTTTGAGATTAGTGTATTGGGGTTGGTGAGGGGATAGTTTCATTTAGACATATGAGATTCATCATGAGGGGTGATTCTCATTTAGGTGGGTCTTTGTGTATGTGGTTGGTATATTTGATTGAGTCGGAGCCATCCATGTTTTAGTTTGTTTGTGGGGTTCGAGTAGCTTTGTATGGGTTTCTTGGAGCATTCTTGTAATGGTCCAAGCCCACCGCTAGCAGATATTGTATTCTTTGGGCTTTCCTTTGAGGTTTTTAAAATGCGTCTGCTAGGGTGAGGTTTCCATACCCTTATAAAGAATGTTCCGTTCTCCTCCTCCACCGATGTGGGATCTCACAATTCATGTACATAAGTTAAGCATTCTTAACAATTGAATGAGTCATGAGTTTCTGCGAGATGTTCATTTTGTTCTTAGTTCTTCGTCAGGATAACCTTTGCCAATGAGCCACCCGACGAGTTATTTTCATTGGAATAACCTTTGTCGACTCCCAACACTTCCCCGAAATATTGGACTCGATATATTGACGTGATATTAAGTTTGATAACTTATCTAAAGTAAATAAGGAAAACAAATAAGTGAAAAGCATGAATAACCTTTTATTTATTGAAGTTTCTGACCGCGCTTCGTTTTGGCTGGTTGTCAGATTTGAGGCAACTGGGGATGAGCATGTGGGATGCTTATGTCGAGCAGGCGCTTGCGCAGCGAGGGTTGCTCCAATTGCTCAGGTCTTTGAGACCCATTACGCCATCACTCGAGAAACTAAATTCCGTTGACGACGAATCTCCCATGGAAGCGAAAGAAGATGGTGAATTCAAGGTGTTCGATGAAATGCAGCCATGGGATAGGAACTCTGTGGAGGTTGAAATTTCAGAATCCACTGTCCAGAAGCGGCTTCTTGATATTCCCAGTTCCGGTATGCTTCCTTGCTTTTATTATGTGGGAATGAATGCATTAGAACTTGAATGCCATTTTGCATATTTGATATTGTTGACATTGTCAGCGCAGTGA

mRNA sequence

GCACTAAAATTAGGATCTTCCAACGTTTCTTCTTTTTCGACATCCTTTGCCGCCGCCATTTCCCGCTCCCGCTCCCGTCGCTGTTCTGGCGCCACCGGCAGGTGCCTCTAGCTTTCTCTATCGTTCGTAGACCGAGTTTTCGGCGAAGATTGTAAGACTTTCCGTAGTCTATCAATCTCGCTTCAAGTTCGTGGATTCAATAGTATTACCGAAGGAAATAACTGATGCGTTGGGTTGTTTTATGTGCTAGTAATATTTGGCTGCATTATTTAGGGACTGTTCTTGTGGCATTTCCTTTCAAAGGTTCAAACCTCAGTTCACGCAGCTATGGAAATTTGATTTGAGGCAACTGGGGATGAGCATGTGGGATGCTTATGTCGAGCAGGCGCTTGCGCAGCGAGGGTTGCTCCAATTGCTCAGGTCTTTGAGACCCATTACGCCATCACTCGAGAAACTAAATTCCGTTGACGACGAATCTCCCATGGAAGCGAAAGAAGATGGTGAATTCAAGGTGTTCGATGAAATGCAGCCATGGGATAGGAACTCTGTGGAGGTTGAAATTTCAGAATCCACTGTCCAGAAGCGGCTTCTTGATATTCCCAGTTCCGGTATGCTTCCTTGCTTTTATTATGTGGGAATGAATGCATTAGAACTTGAATGCCATTTTGCATATTTGATATTGTTGACATTGTCAGCGCAGTGA

Coding sequence (CDS)

ATGAGCATGTGGGATGCTTATGTCGAGCAGGCGCTTGCGCAGCGAGGGTTGCTCCAATTGCTCAGGTCTTTGAGACCCATTACGCCATCACTCGAGAAACTAAATTCCGTTGACGACGAATCTCCCATGGAAGCGAAAGAAGATGGTGAATTCAAGGTGTTCGATGAAATGCAGCCATGGGATAGGAACTCTGTGGAGGTTGAAATTTCAGAATCCACTGTCCAGAAGCGGCTTCTTGATATTCCCAGTTCCGGTATGCTTCCTTGCTTTTATTATGTGGGAATGAATGCATTAGAACTTGAATGCCATTTTGCATATTTGATATTGTTGACATTGTCAGCGCAGTGA

Protein sequence

MSMWDAYVEQALAQRGLLQLLRSLRPITPSLEKLNSVDDESPMEAKEDGEFKVFDEMQPWDRNSVEVEISESTVQKRLLDIPSSGMLPCFYYVGMNALELECHFAYLILLTLSAQ

Homology

[Close]

BLAST of CmoCh15G014120 vs. ExPASy Swiss-Prot
Match: Q8GW43 (8-amino-7-oxononanoate synthase OS=Arabidopsis thaliana OX=3702 GN=BIOF PE=1 SV=2)

HSP 1 Score: 54.7 bits (130), Expect = 8.1e-07
Identity = 35/84 (41.67%), Postives = 51/84 (60.71%), Query Frame = 0


Query: 4  WDAYVEQALAQRGLLQLLRSLRPITPSLEKLNSVDDESPMEAKEDG--EFKVFDEMQPWD 63
          WD  VE+A+      Q+LRSLRPI  S +     ++E  ++++ +G   ++VFD +  WD
Sbjct: 6  WDKTVEEAVNVLESRQILRSLRPICMSRQ-----NEEEIVKSRANGGDGYEVFDGLCQWD 65

Query: 64 RNSVEVEISESTVQKRLLDIPSSG 86
          R SVEV +S  T QK L D PS+G
Sbjct: 66 RTSVEVSVSIPTFQKWLHDEPSNG 84

[Close]

BLAST of CmoCh15G014120 vs. ExPASy TrEMBL
Match: A0A6J1HX99 (8-amino-7-oxononanoate synthase isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111468883 PE=3 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.8e-33
Identity = 77/85 (90.59%), Postives = 80/85 (94.12%), Query Frame = 0


Query: 1  MSMWDAYVEQALAQRGLLQLLRSLRPITPSLEKLNSVDDESPMEAKEDGEFKVFDEMQPW 60
          MSMWDAYVEQALAQ G LQLLRSLRPITPSLEKLN VDDE+P+EAKEDGEFKVFDEMQPW
Sbjct: 1  MSMWDAYVEQALAQLGFLQLLRSLRPITPSLEKLNPVDDEAPIEAKEDGEFKVFDEMQPW 60

Query: 61 DRNSVEVEISESTVQKRLLDIPSSG 86
          DR SVEVEI+ESTVQK LLDIPSSG
Sbjct: 61 DRASVEVEIAESTVQKWLLDIPSSG 85

[Close]

BLAST of CmoCh15G014120 vs. ExPASy TrEMBL
Match: A0A6J1I0X3 (8-amino-7-oxononanoate synthase isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111468883 PE=3 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.8e-33
Identity = 77/85 (90.59%), Postives = 80/85 (94.12%), Query Frame = 0


Query: 1  MSMWDAYVEQALAQRGLLQLLRSLRPITPSLEKLNSVDDESPMEAKEDGEFKVFDEMQPW 60
          MSMWDAYVEQALAQ G LQLLRSLRPITPSLEKLN VDDE+P+EAKEDGEFKVFDEMQPW
Sbjct: 1  MSMWDAYVEQALAQLGFLQLLRSLRPITPSLEKLNPVDDEAPIEAKEDGEFKVFDEMQPW 60

Query: 61 DRNSVEVEISESTVQKRLLDIPSSG 86
          DR SVEVEI+ESTVQK LLDIPSSG
Sbjct: 61 DRASVEVEIAESTVQKWLLDIPSSG 85

[Close]

BLAST of CmoCh15G014120 vs. ExPASy TrEMBL
Match: A0A6J1HYR9 (8-amino-7-oxononanoate synthase isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111468883 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.8e-33
Identity = 77/85 (90.59%), Postives = 80/85 (94.12%), Query Frame = 0


Query: 1   MSMWDAYVEQALAQRGLLQLLRSLRPITPSLEKLNSVDDESPMEAKEDGEFKVFDEMQPW 60
           MSMWDAYVEQALAQ G LQLLRSLRPITPSLEKLN VDDE+P+EAKEDGEFKVFDEMQPW
Sbjct: 25  MSMWDAYVEQALAQLGFLQLLRSLRPITPSLEKLNPVDDEAPIEAKEDGEFKVFDEMQPW 84

Query: 61  DRNSVEVEISESTVQKRLLDIPSSG 86
           DR SVEVEI+ESTVQK LLDIPSSG
Sbjct: 85  DRASVEVEIAESTVQKWLLDIPSSG 109

[Close]

BLAST of CmoCh15G014120 vs. ExPASy TrEMBL
Match: A0A6J1EMB4 (8-amino-7-oxononanoate synthase isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111435700 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 6.8e-33
Identity = 77/85 (90.59%), Postives = 80/85 (94.12%), Query Frame = 0


Query: 1  MSMWDAYVEQALAQRGLLQLLRSLRPITPSLEKLNSVDDESPMEAKEDGEFKVFDEMQPW 60
          MSMWDA VEQALAQ GLLQLLRSLRPITPSLEKLN VDDE+P+EAKEDGEFKVFDEMQPW
Sbjct: 1  MSMWDACVEQALAQLGLLQLLRSLRPITPSLEKLNPVDDEAPIEAKEDGEFKVFDEMQPW 60

Query: 61 DRNSVEVEISESTVQKRLLDIPSSG 86
          DR SVEVEI+ESTVQK LLDIPSSG
Sbjct: 61 DRASVEVEIAESTVQKWLLDIPSSG 85

[Close]

BLAST of CmoCh15G014120 vs. ExPASy TrEMBL
Match: A0A6J1EQL2 (8-amino-7-oxononanoate synthase isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435700 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 6.8e-33
Identity = 77/85 (90.59%), Postives = 80/85 (94.12%), Query Frame = 0


Query: 1  MSMWDAYVEQALAQRGLLQLLRSLRPITPSLEKLNSVDDESPMEAKEDGEFKVFDEMQPW 60
          MSMWDA VEQALAQ GLLQLLRSLRPITPSLEKLN VDDE+P+EAKEDGEFKVFDEMQPW
Sbjct: 1  MSMWDACVEQALAQLGLLQLLRSLRPITPSLEKLNPVDDEAPIEAKEDGEFKVFDEMQPW 60

Query: 61 DRNSVEVEISESTVQKRLLDIPSSG 86
          DR SVEVEI+ESTVQK LLDIPSSG
Sbjct: 61 DRASVEVEIAESTVQKWLLDIPSSG 85

[Close]

BLAST of CmoCh15G014120 vs. NCBI nr
Match: XP_022969780.1 (8-amino-7-oxononanoate synthase isoform X1 [Cucurbita maxima])

HSP 1 Score: 151.8 bits (382), Expect = 3.7e-33
Identity = 77/85 (90.59%), Postives = 80/85 (94.12%), Query Frame = 0


Query: 1  MSMWDAYVEQALAQRGLLQLLRSLRPITPSLEKLNSVDDESPMEAKEDGEFKVFDEMQPW 60
          MSMWDAYVEQALAQ G LQLLRSLRPITPSLEKLN VDDE+P+EAKEDGEFKVFDEMQPW
Sbjct: 1  MSMWDAYVEQALAQLGFLQLLRSLRPITPSLEKLNPVDDEAPIEAKEDGEFKVFDEMQPW 60

Query: 61 DRNSVEVEISESTVQKRLLDIPSSG 86
          DR SVEVEI+ESTVQK LLDIPSSG
Sbjct: 61 DRASVEVEIAESTVQKWLLDIPSSG 85

[Close]

BLAST of CmoCh15G014120 vs. NCBI nr
Match: XP_022969782.1 (8-amino-7-oxononanoate synthase isoform X3 [Cucurbita maxima])

HSP 1 Score: 151.8 bits (382), Expect = 3.7e-33
Identity = 77/85 (90.59%), Postives = 80/85 (94.12%), Query Frame = 0


Query: 1  MSMWDAYVEQALAQRGLLQLLRSLRPITPSLEKLNSVDDESPMEAKEDGEFKVFDEMQPW 60
          MSMWDAYVEQALAQ G LQLLRSLRPITPSLEKLN VDDE+P+EAKEDGEFKVFDEMQPW
Sbjct: 1  MSMWDAYVEQALAQLGFLQLLRSLRPITPSLEKLNPVDDEAPIEAKEDGEFKVFDEMQPW 60

Query: 61 DRNSVEVEISESTVQKRLLDIPSSG 86
          DR SVEVEI+ESTVQK LLDIPSSG
Sbjct: 61 DRASVEVEIAESTVQKWLLDIPSSG 85

[Close]

BLAST of CmoCh15G014120 vs. NCBI nr
Match: XP_022969781.1 (8-amino-7-oxononanoate synthase isoform X2 [Cucurbita maxima])

HSP 1 Score: 151.8 bits (382), Expect = 3.7e-33
Identity = 77/85 (90.59%), Postives = 80/85 (94.12%), Query Frame = 0


Query: 1   MSMWDAYVEQALAQRGLLQLLRSLRPITPSLEKLNSVDDESPMEAKEDGEFKVFDEMQPW 60
           MSMWDAYVEQALAQ G LQLLRSLRPITPSLEKLN VDDE+P+EAKEDGEFKVFDEMQPW
Sbjct: 25  MSMWDAYVEQALAQLGFLQLLRSLRPITPSLEKLNPVDDEAPIEAKEDGEFKVFDEMQPW 84

Query: 61  DRNSVEVEISESTVQKRLLDIPSSG 86
           DR SVEVEI+ESTVQK LLDIPSSG
Sbjct: 85  DRASVEVEIAESTVQKWLLDIPSSG 109

[Close]

BLAST of CmoCh15G014120 vs. NCBI nr
Match: XP_023520511.1 (8-amino-7-oxononanoate synthase isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 151.4 bits (381), Expect = 4.8e-33
Identity = 77/85 (90.59%), Postives = 80/85 (94.12%), Query Frame = 0


Query: 1  MSMWDAYVEQALAQRGLLQLLRSLRPITPSLEKLNSVDDESPMEAKEDGEFKVFDEMQPW 60
          MSMWDAYVEQAL Q GLLQLLRSLRPITPSLEKLN VDDE+P+EAKEDGEFKVFDEMQPW
Sbjct: 1  MSMWDAYVEQALEQLGLLQLLRSLRPITPSLEKLNPVDDEAPIEAKEDGEFKVFDEMQPW 60

Query: 61 DRNSVEVEISESTVQKRLLDIPSSG 86
          DR SVEVEI+ESTVQK LLDIPSSG
Sbjct: 61 DRASVEVEIAESTVQKWLLDIPSSG 85

[Close]

BLAST of CmoCh15G014120 vs. NCBI nr
Match: XP_023520512.1 (8-amino-7-oxononanoate synthase isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 151.4 bits (381), Expect = 4.8e-33
Identity = 77/85 (90.59%), Postives = 80/85 (94.12%), Query Frame = 0


Query: 1  MSMWDAYVEQALAQRGLLQLLRSLRPITPSLEKLNSVDDESPMEAKEDGEFKVFDEMQPW 60
          MSMWDAYVEQAL Q GLLQLLRSLRPITPSLEKLN VDDE+P+EAKEDGEFKVFDEMQPW
Sbjct: 1  MSMWDAYVEQALEQLGLLQLLRSLRPITPSLEKLNPVDDEAPIEAKEDGEFKVFDEMQPW 60

Query: 61 DRNSVEVEISESTVQKRLLDIPSSG 86
          DR SVEVEI+ESTVQK LLDIPSSG
Sbjct: 61 DRASVEVEIAESTVQKWLLDIPSSG 85

[Close]

BLAST of CmoCh15G014120 vs. TAIR 10
Match: AT5G04620.2 (biotin F )

HSP 1 Score: 54.7 bits (130), Expect = 5.8e-08
Identity = 35/84 (41.67%), Postives = 51/84 (60.71%), Query Frame = 0


Query: 4  WDAYVEQALAQRGLLQLLRSLRPITPSLEKLNSVDDESPMEAKEDG--EFKVFDEMQPWD 63
          WD  VE+A+      Q+LRSLRPI  S +     ++E  ++++ +G   ++VFD +  WD
Sbjct: 6  WDKTVEEAVNVLESRQILRSLRPICMSRQ-----NEEEIVKSRANGGDGYEVFDGLCQWD 65

Query: 64 RNSVEVEISESTVQKRLLDIPSSG 86
          R SVEV +S  T QK L D PS+G
Sbjct: 66 RTSVEVSVSIPTFQKWLHDEPSNG 84

The following BLAST results are available for this feature:

BLAST of CmoCh15G014120 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GW43	8.1e-07	41.67	8-amino-7-oxononanoate synthase OS=Arabidopsis thaliana OX=3702 GN=BIOF PE=1 SV=...	[more]

BLAST of CmoCh15G014120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HX99	1.8e-33	90.59	8-amino-7-oxononanoate synthase isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1I0X3	1.8e-33	90.59	8-amino-7-oxononanoate synthase isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1HYR9	1.8e-33	90.59	8-amino-7-oxononanoate synthase isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1EMB4	6.8e-33	90.59	8-amino-7-oxononanoate synthase isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1EQL2	6.8e-33	90.59	8-amino-7-oxononanoate synthase isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]

BLAST of CmoCh15G014120 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022969780.1	3.7e-33	90.59	8-amino-7-oxononanoate synthase isoform X1 [Cucurbita maxima]	[more]
XP_022969782.1	3.7e-33	90.59	8-amino-7-oxononanoate synthase isoform X3 [Cucurbita maxima]	[more]
XP_022969781.1	3.7e-33	90.59	8-amino-7-oxononanoate synthase isoform X2 [Cucurbita maxima]	[more]
XP_023520511.1	4.8e-33	90.59	8-amino-7-oxononanoate synthase isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023520512.1	4.8e-33	90.59	8-amino-7-oxononanoate synthase isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmoCh15G014120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G04620.2	5.8e-08	41.67	biotin F	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027310	Profilin conserved site	PROSITE	PS00414	PROFILIN	coord: 1..9

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh15G014120.1	CmoCh15G014120.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009102	biotin biosynthetic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003779	actin binding
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0030170	pyridoxal phosphate binding