CmoCh15G013990 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGCTCGTGTCGGTACTAGCGGAGATTCTGGAGGAGTACACGGTGTTGCTTACGGAGGTGCTCCGGCAGCTCTTCCATTCCGCGCCATTTCCTCGCCGAGTCCGATTTCTCATCCTTCACAATCTTCCTTTCGCCAACAACTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTGCCCTAATTCACTCCAATCGACCTAGCGGCGCAGTTGCTTAG ATGATGCTCGTGTCGGTACTAGCGGAGATTCTGGAGGAGTACACGGTGTTGCTTACGGAGGTGCTCCGGCAGCTCTTCCATTCCGCGCCATTTCCTCGCCGAGTCCGATTTCTCATCCTTCACAATCTTCCTTTCGCCAACAACTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTGCCCTAATTCACTCCAATCGACCTAGCGGCGCAGTTGCTTAG ATGATGCTCGTGTCGGTACTAGCGGAGATTCTGGAGGAGTACACGGTGTTGCTTACGGAGGTGCTCCGGCAGCTCTTCCATTCCGCGCCATTTCCTCGCCGAGTCCGATTTCTCATCCTTCACAATCTTCCTTTCGCCAACAACTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTGCCCTAATTCACTCCAATCGACCTAGCGGCGCAGTTGCTTAG MMLVSVLAEILEEYTVLLTEVLRQLFHSAPFPRRVRFLILHNLPFANNSSSSSSSSSSSSALIHSNRPSGAVA Homology
BLAST of CmoCh15G013990 vs. ExPASy TrEMBL
Match: A0A6J1EQP1 (uncharacterized protein LOC111435715 OS=Cucurbita moschata OX=3662 GN=LOC111435715 PE=4 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 3.0e-26 Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0
BLAST of CmoCh15G013990 vs. ExPASy TrEMBL
Match: A0A6J1I1Z0 (uncharacterized protein LOC111469109 OS=Cucurbita maxima OX=3661 GN=LOC111469109 PE=4 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 3.4e-22 Identity = 67/73 (91.78%), Postives = 67/73 (91.78%), Query Frame = 0
BLAST of CmoCh15G013990 vs. ExPASy TrEMBL
Match: A0A6J1DZC9 (uncharacterized protein LOC111025999 OS=Momordica charantia OX=3673 GN=LOC111025999 PE=4 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 2.2e-13 Identity = 45/53 (84.91%), Postives = 50/53 (94.34%), Query Frame = 0
BLAST of CmoCh15G013990 vs. ExPASy TrEMBL
Match: A0A1S3AUP0 (uncharacterized protein LOC103482883 OS=Cucumis melo OX=3656 GN=LOC103482883 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 2.5e-12 Identity = 43/54 (79.63%), Postives = 51/54 (94.44%), Query Frame = 0
BLAST of CmoCh15G013990 vs. ExPASy TrEMBL
Match: A0A0A0KM75 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G146820 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 9.4e-12 Identity = 41/51 (80.39%), Postives = 48/51 (94.12%), Query Frame = 0
BLAST of CmoCh15G013990 vs. NCBI nr
Match: XP_022928978.1 (uncharacterized protein LOC111435715 [Cucurbita moschata]) HSP 1 Score: 127.1 bits (318), Expect = 6.2e-26 Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0
BLAST of CmoCh15G013990 vs. NCBI nr
Match: KAG7017064.1 (hypothetical protein SDJN02_22176, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 121.7 bits (304), Expect = 2.6e-24 Identity = 73/76 (96.05%), Postives = 73/76 (96.05%), Query Frame = 0
BLAST of CmoCh15G013990 vs. NCBI nr
Match: XP_023520510.1 (uncharacterized protein LOC111783933 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 114.4 bits (285), Expect = 4.2e-22 Identity = 68/73 (93.15%), Postives = 69/73 (94.52%), Query Frame = 0
BLAST of CmoCh15G013990 vs. NCBI nr
Match: XP_022970120.1 (uncharacterized protein LOC111469109 [Cucurbita maxima]) HSP 1 Score: 113.6 bits (283), Expect = 7.1e-22 Identity = 67/73 (91.78%), Postives = 67/73 (91.78%), Query Frame = 0
BLAST of CmoCh15G013990 vs. NCBI nr
Match: XP_022159655.1 (uncharacterized protein LOC111025999 [Momordica charantia]) HSP 1 Score: 84.3 bits (207), Expect = 4.6e-13 Identity = 45/53 (84.91%), Postives = 50/53 (94.34%), Query Frame = 0
BLAST of CmoCh15G013990 vs. TAIR 10
Match: AT1G33055.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: anaerobic respiration; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; Has 20 Blast hits to 20 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 53.9 bits (128), Expect = 6.2e-08 Identity = 26/51 (50.98%), Postives = 42/51 (82.35%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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