CmoCh15G013960 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh15G013960
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Mitochondrial import inner membrane translocase subunit TIM13
Location	Cmo_Chr15: 9493594 .. 9501567 (-)
RNA-Seq Expression	CmoCh15G013960
Synteny	CmoCh15G013960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCGCCTCCCTTGAAAGCAGAGTCCGGTCTAGGGCTCTGGCAAATACAAAAGGGCTGTGGTTTATAGGGTTTTGCAAGCACCGAGCAAATGGATTCATTTTCATCGCCCTCAAGCGGTTCTTCTTCCCAATTTTCGCCCAACGAATTCAGGGACCAGCTCAAGACTCAGCTTGCTCAGGCGTACGCCGAGGAGTTTCTTGAGGTTCAAGTTCTCTATACTTGTTTCTTTTCTTCCAAATTTGTTGGTTGAGTTATCGATATATATGTGTATCTGGACCTCTTAGAGTAGTCGGTTTAATGAATGCGTTTCGCTATTGCGTGTTATGTGACGGTTGAAATTAGAGAAATCAATTGGTAATTTCTGGTTTTGATGTTTGGGTAGCGATGCGATCTGGCTTTTAACGATGAGATGTAGGAATTAATCGATGCCAGTTTTTAGGCTGTCGATTTTGTATTTTGGATTTTGGAGTGTTATATCGCAACATCAAACGGAATCGTTTGCGTTCTGTTTTCTCAGTTCTAGTTCGAACTTGTTTTTTATATTCTCATATTTTATTTCTTCTAATTGAAGATGTAGAAATATTAAGTCCATGTGTTCTAGAATTTCTTTTTCGAGGAGCCATTCTTGGTGATTATTAGTTCACAAGAATCTTGTAGTTTTGTGCCTTAAACTTGTTTTCGATGAGTCATTCTAGCCGATTTCATGTTGAGGTTAACATAAACGGCTACAAGGGGGCTCTCTCTCTTGTTGTGATTCAGAGTTTCTTCAAGATTAACACACGAGGAAGAGTTAATGAAGGTGGAAGTGGATGATTATAAATAATTTCTCGAGGTTTTGAGAAACAGTCGTGGTTGAACCTTTCTTGCCCTCATCGAAAATTAGAGATGACCACCAGACACGGACTATAGACAAATAGGCCATTTTAGGATTTGATGGGACAATCGTAGGTCATTTATCCTTGGGAAATGCTTACAAAACAACTGGAAACTTGAATGAACGTGGTTCCATATTATGGGGGTGGATGTAAAGGTTAGTTTGGTTAGGCACATTGCACATTGATGTCATTATACACAAATCATGATCTTGAAAGGAAAAATAATTTTACTTAGTCCTGGAAAGCTAGTTATCCATGAAAAGTCACTAAAGGAAAACAAGGGGGAAAACTTTTTTTTTTTTAATTATAAAAAGGCAACTATCCTACCTTACTTTTACTGAGCCCTCTCTTTCACCTCTGGATTCCCAAGATTTCTTCTAAAATTTGAATTTCAGCTACTATTTAAGCCCAACTAGCATTGATCTACCATAGGATCTTTGGACTTCGGCATGCTAAAGATACTAGGGAAGGAAGGACATAAAGGTTCAATGTTCAGGCAATGATCCTTCCAAAACAGGGTTTTATTACCTTTGCCCTCCTTTGTCTTATACTACTTATTAAAAAAATTGAATGCACTCCGAAATATGGAACTAAGAGCCCTTAAAATGATTGTGCTTTCAATTTCTCTTGCCACTTGTTTTTGGAAGCTATCATCTCTATAGCGGATTGATTTGGAAAAAAAAAATAAAAATAAATGTAGACATTTAATCTTGTCGAAAATCACGCGATTTTTGGCGAGGTATTTATTCCCATTTAGGAGCGTACAAGTATCGTGGTTTTATTGTGTAAATCTCTTGTGGACAAACGACGACGAAATTGCACGAAGTTGGCACCGGAAATCCTGTCGGTAACGAATGGGAAAGAAACGAGGGTTTTTGACTGCACTTTCGGACGGAGAAGATGAAGAGTTGGGTCAGTCATTCAGACCCTAGCCGTTTCGATTTAGCCCACAAGTTCTAAGCCCAGGCGAACTAGCAGCCCACGTCGTTTTAGCCTTCAACCCAGTGGCCCAATAGTCGTGACCCATACCCATCGTGCGTCTAAGTTGCAAGTTTGTTTACGTTGTCCAGCCCAAAGGAGGTCTAGTCCATTCAGTTTCGGCCCAACCTGACAGCTCGTGTTTTCCTTCAACGCCGCACGTGATCAGCTCTCAACCACGACTCCTTTCAATGCATCCTTGGCTTGGCTTCAACGCATCCTTGGCTTGGCTTTATCGTTTTGCTCCTCTCAGCTTTATCGTTTTGCTCTGCTCAGTTTCTCGGCTTAGACGACTCGGTATACTATAATATATCGATTTCTAGGTTTTCGATCATTATGAATCCATTTTTGACCTTATCTAAGTCATTTGAGGTTAGTAAGATTTTTTCTTTACAAGTTTAATTAGCTTAGGAGCTTATATTGGAATTAATCATGATGTGGAGCTAAGTTAAGTTATTAGTAGGCCCTAAGCATGTTATATGAATTTTCATAGGTAGGAGTTAGGTGTTAGATTGTAGTTTCGAGACGACTACCAAATTGTTAGTGTCTTCAGCCAAGGCCAACCAAGTAAGTGACCTTACTATTGGAGTTAGCCTATTGTTTGATGTATGATTGCATGTACCATATTATATGTGTTATGCTTATGTTATGTGATGTTTATGTGATCTTTGTATTAATATGAGACGTATGTCACGTATGCATGTAAACCCATAACACTACTTCTATGAATGAATTGAAACGCTATGAAAGAAATGTTATGTTTTACATTTAAAGTTTTGTGATGGAACATGAGATGTTTGTCATGCATACTTGTATTATGTCATGAAAGAAAAGAGAAAGGAAATGAAATGTATGTTATGTCATGAATGTAAATCACAGGACCTCATGCATGTTTGTATGTCATATGCATTGGGATACTTTCCCATTATGTTATGTTAGTATGGATGCGTACGTTTGATATTTATGTATGCCATGATATCATGCGGACCTTTTCTTTTTGTGGCATCTGGTGGCGTAGACCAAGTTGAGCCCAGGGGTACGTATACGAGCCCGCTTGGGGGCCCATGTGTGCATACGTGGGCCGTGTGGGGAAAAGTAACATACATCCAACCCTGCCCAAATTTCATGTTTTGAATTGGTTAGGCAAGTCCATACCCTTATTTTAAAGATGTTTATTATGAATTTCCGCAATTATGATTTAAGATGTTTAGGTTAAGAAAATTAGGGAGTTACAGTTTGGTATCAGAGCTCTAGGTTTTAGATTTGGTAGAGCATACTTCCAGGGTTCTCCAACAAAAGTATTGTCACCGTTTGGTATGCTTTTAAAGGATAATAATTGTTTAGTTAAATGATGCATGCAATATGTTAGTTTTACTATTTTAATTGAGTAAGGTATGACACAATGTATATGTTGTAAATGTTAGCATGATTTATGATGTGGCAAGATTAAATATGTTATATGACGTGACAAGATTAAATATGTTAAGACATGTATAATATGATGGTTATGCTAATGTAAAGATTGTATGTATGTGTGACATGTATTTGTAGGATTGTTTATTGAAGCCTATTAGTTAAGTATGTGACTAATATGATGGTTATGCTAATGTAAAGATTGTATGTATGTCTGACTTGTATTTGTATGATTGTTTATTGAAGCCTATTAGTTAAGTATGTGACTTAGTAGTTACGTGTTTTGTATAGAGTATGCCACCTAGAACACGAGGTGGAGAAATTTGGGGACGACCCCCACCTAGGGGTAGAAGGAGTGTTAGAAGAGGTCGAGGTTCGAAACGGGATAATTCTGTAAACCAGCCCGATGTAACTGTGCCACTCCTACCACCAGCGATACCTCTGGCCGCACCAAACCCTACTGCTGCTCTAATAGAAGCATTGCAAGCTGTTGTGCAAATTATGATGACTACTCAACGTGCAAATGCTTCATCATCAACTAGACAAGCAAAGTGTTTGCGAGATTTCAAGAGGGTTGACCCTCAAACCTTTAATGGGTCTTCAGATGATCCAACTGAGACACAATTATGGTTGAGATCTATAGAGACCATGTTTGAGTTGATCAATTGCCCTGATGATCAGAAGGTGCGATGTGCAACATTCATGTTGCGTGATGATGCAGAGTTATGGTGGCAATCCACCAGCGAGATTATTAGTCCTGAGGGATGTGTAATCTCGTGGGCGGAATTCAAGGATGCCTTTATGGAAGAGTACTACTCTGAGGACATTCAACTTCGTATGCAGCAAAAGTTCACTCAACTGTGTCAAAGGGGGCGTTCTGTTACCACATATGCTAGGGAGTTCATCAGAATGAAACATTTTGCCCCGGAGTTGGTGAACACGGACTACAGAACAACATGGTGGTTCGTACGTGGGTTGGACAAGAGGATCCGCCATATTGTTGAGGCGATATCACCTGCTACCTATGCTGTTGCCTTGAGAGCAGCTAAGGCCATGGAGGGAGTTGAAGAATCTCCTGAACCCCCTCCACCGATAGTGAAACGAAAGCGACGTCATGACCAAGTTGACCGTCATGACCAAGTTGACCGTCATGACCAAGTTGACCGTCATGATCCATTGCCATCAAAGCCACAACGACGACCTGACAGACAGTACCGTTATACCAGGCGTGGTCAGCAAAGAAATGGAAGCCGACCAGATAATAGACCTCAGTGTAATGAATGTGGGAAAAATCACTGGGGTCGATGTTTGGCCCATACCAGAGCCTGTTTTCAATGTGGAAAGGAGGGTCACATAGCTAAAGATTGCCAAGGAGGTTGCGCGAATGATTCTGGAAACCAACAGAGGAGACTAAGCATAGCAGATCGTCCTACTCAGAACTATCCTTCGACAAGAGCTTATGCCTTTACTGGCAAGGATATTGGGAATTCTGATGCGGCGGTGACAGGTACAATATCTGTTCTTGGTTACCTTGCTTTAACACTATTTGACTCGGGATCTACACATTCATTTATATCTGTTGTTTTCGTTAGTCAAGAAAAATTTATATTAAAATGTAAAAATTTGTATCAAAACATTTGTTGCATGATTTCTCTCTTAGCACCTTGACAGGGGTGGACTTGATTGCCGCTTATAGGGTAAAAGATAGTCCTGTATTAGGAGTTAACCTAGAGGTAGATTTAATGGTAGTTCACATGATTGTATATGATGTTGTGGGAATGGATTAGTTAGTGGAAAATTATTCTAGCATAGACTTTTACCAGAAAGAAGTGATATTTACGACATCGTCCAAGACCAGTTTCAAATTCAAGGGTACGAGTTTAGGAATTATGCCTAAAGTGATATCAATGATGAAAGCGAAGAAGTTGGTTCAGCACGAAGCATGGGTCATACTAGCTAGTGTCATGGATACCAAAAAGGAAGAAACTCCCTTAGCCATAGTGTCAGTTGCAAATAAATTTCCTGATGTGTTCCTAGAGGATTTGTCAAGAATTCCTTCGTCACGAGATGTTAATTTTGGAATAGAGTTGGAACCAAGTATGAGTCCTATCTCTAAGGCCTCGTTTTGTATGGCACTAGTTGAATTGAAAGAATTCAAACACAACTATAAGACCTGTTGGATAAAGGATTTATTAGACTCGGCGTTTCTCCTTGGGGTGCGCTGGAGTTATTTGTCAAGAAAAAAGATGGTTCGATGCCCTTGTGCATTGATTACAGGGAGGTGAACAAGAGAATGGTGAAGAACAAGTATCTTCTTCCACGCACTGAGGACTTATTCGATCAACTTAGGGAAACAACAATGTTCTAAAAAATTGATGTTCAGTTAGGTTACCACTAGATCAAGATAAAAAATGAGGATATACCGAAGACAACTTTTAGAACAAGCTATAGCTATTATGAGTTCGTGTTATGTCATTTGGACTCACTAATGCCCCTGTAGTGTTCATGGAACTGATGAATTGAGTGTTTAAGAAATGTCTTGATATTTTTGTCATAGTATTCATTGACAATATCTTGGTATACTCGAAGACAGATCAAGAACATCATATGCACCTGAGAAAGACCTTGACAATTCTGAGGGAAAACAAACTGTATGTCAAGTTTTCGAAGTGTGAATTTTGGTTACCCGAAGTTTCATTTTTGGGGCATGTGGTATCTGAGAAGGGTGTGTCAAGGTGGAAGCCGTTACCAAATGGACTCGTTCAACTACTGTCGTTGAGATACCTAGTTTCTTAGGATTAGCTTGTTACTACTGACGCAAAGTAGCCGCCTCTTCTCAGGATAAATCTGGCTAAAGTTAATTTGCCACCTCCCGACAGGAATAAACTCTTCCAAAGGTCCAATTTCCTACACGCTTACACTTTCTCAACAATTGGTTCACAGAAGGACTGCTTCCGATTCCCTCCTAAAGGCATTCCCTAGTAGGAGAAAAGCTAGACGCCAGCCACATGCCCATTACTCAACCGTTGCAACCACCTCATGTTCGGAGATTTTTGAAAAAGCTAACATAGGACTCCTTGAAAGGAAAATGGAAGAATGGGATAACCTTTCAACAATAAACCAAAATCTTGATTCTGTAATCAAACTTCAGGGTTTTTCTCCACCGAGTCTGCTTTGGTAGCTCTGCAAGCGTCGGTGATGAGTGCCTTTTGTAACTATTCACTAGGTCACATTTTGCTAGATTGTAAGCCTTTTCTCTAGGGTGCACCCTTTTATAGGCTCTGTTTCTGTATTCTCTTGTATTCTTTCATTTGTTTTCTCAATGCAAGTTGGTTTTTTACTAAAAATAAAAAAACACAGATGGAAGAGCTTCCAAATCAAGTGTTTGGATGCGTGCCTATCAGAAGGACGTTGGACCTATATTGACTTTGTATAAATGGTGTCTAACACGTCAATTGCACTAATAAATGTCCAATACGTGTTCAACAAGTGTCGAAGTGTTTTTCAGACATGGATACTCTAACGAACTAAAGTGTTCATGCTTGTTAGCCTAGAATGATAAACGGACAGATGGCCTCTGCAATATTCTTCACATTTTTACCATGTTCTTGAACCTTAAAGATTAATGTGAGGAAAGTTATGATTTGGGTATCTATATTTGTGATCCGAAGGTGCCACAACCAGGTATTAGACAAGCCACTGAAGGGGCTAATCGCCCTGCTGACTTCAGTACCCCATATGCCTCTTGGAGGAAGCCATTACAAAACTCATTGGGAACCTGCTGTATTTAGAGTGGAGAGGGGACTGCCGAAGTTGAAATACACATTGGGGTTCTCCGTAGTTTGCACCTTGTGTGTTCTTTGTAATATTTTCTTGATAATAATTTTCTAGCTTAACAATAATTAGTATTAGTATGTAATCCTTTTCTTTTTTTTTCAATAAGTCAGGAGGTTCAAATTCCCATATTCACGAGCCAGTCTCTGGCTCTTGCTCTCTCAAAACTAGAGTTAGATTTTTCCCCATTCTCAATTAATTAAGAAACATACTTAGGTGTATCTTGGGCTGTACCTATCTTTTTGCAGCCCACCTAGATGTCCGACTACCGTTTGTCACGTGACGAACTCTTCTTTCTTATTCTTTTTCGAACTATTTTTGAATTTTTTGCTGAAATATGATTTGAGTGAGCTGCAAAAAGATGGGTTGAGCTTAAGATAGACCCAAGTAATGCTCTTATATTTATTATCTTCCCTCAATTTGGGCAAATTTGAGTTGCTCACTCGCACTTTCTCGCAGACCTTAAGAGTGAAGTGCTTTGACAAGTGCATTACAAAGCCAGGGTCAAGCCTAAGTGGGAGCGAGAGTAGTTGCATCTCCAGGTGCATGGAACGCTATATTGAGGCCACCGGCATCGTCAGTAGAGCCCTGTTTAAGACACCACACTGAAAAGAAAAGGTTTTGCTGAAACATTATGAGGTCCATGTTTGATAATTCCCCGTTCGATATTTGTTATTTAGTTCTTTAATCTCATGGATATTTGTTATTTAGTTCTTTAATCTCATGGGTCTTTATTACGGATCCACTTGAACACTCTAATATCTTCTAAGACACGATCAACATCGAAGTCGATCATTACTATCGTTGAAATGTTTTTGTCATTCTCCTTTCTCTTTCTCGTCTTCTTTCTAATCAGCCCCACCACTGATCAAAA

mRNA sequence

GTCGCCTCCCTTGAAAGCAGAGTCCGGTCTAGGGCTCTGGCAAATACAAAAGGGCTGTGGTTTATAGGGTTTTGCAAGCACCGAGCAAATGGATTCATTTTCATCGCCCTCAAGCGGTTCTTCTTCCCAATTTTCGCCCAACGAATTCAGGGACCAGCTCAAGACTCAGCTTGCTCAGGCGTACGCCGAGGAGTTTCTTGAGAGTATGCCACCTAGAACACGAGGTGGAGAAATTTGGGGACGACCCCCACCTAGGGGTAGAAGGAGTGTTAGAAGAGGTCGAGGTTCGAAACGGGATAATTCTGTAAACCAGCCCGATGTAACTGTGCCACTCCTACCACCAGCGATACCTCTGGCCGCACCAAACCCTACTGCTGCTCTAATAGAAGCATTGCAAGCTGTTGTGCAAATTATGATGACTACTCAACGTGCAAATGCTTCATCATCAACTAGACAAGCAAAGTGTTTGCGAGATTTCAAGAGGGTTGACCCTCAAACCTTTAATGGGTCTTCAGATGATCCAACTGAGACACAATTATGGTTGAGATCTATAGAGACCATGTTTGAGTTGATCAATTGCCCTGATGATCAGAAGGTGCGATGTGCAACATTCATGTTGCGTGATGATGCAGAGTTATGGTGGCAATCCACCAGCGAGATTATTAGTCCTGAGGGATGTGTAATCTCGTGGGCGGAATTCAAGGATGCCTTTATGGAAGAGTACTACTCTGAGGACATTCAACTTCGTATGCAGCAAAAGTTCACTCAACTGTGTCAAAGGGGGCGTTCTGTTACCACATATGCTAGGGAGTTCATCAGAATGAAACATTTTGCCCCGGAGTTGGTGAACACGGACTACAGAACAACATGGTGGTTCGTACGTGGGTTGGACAAGAGGATCCGCCATATTGTTGAGGCGATATCACCTGCTACCTATGCTGTTGCCTTGAGAGCAGCTAAGGCCATGGAGGGAGTTGAAGAATCTCCTGAACCCCCTCCACCGATAGTGAAACGAAAGCGACGTCATGACCAAGTTGACCGTCATGACCAAGTTGACCGTCATGACCAAGTTGACCGTCATGATCCATTGCCATCAAAGCCACAACGACGACCTGACAGACAGTACCGTTATACCAGGCGTGGTCAGCAAAGAAATGGAAGCCGACCAGATAATAGACCTCAGTGTAATGAATGTGGGAAAAATCACTGGGGTCGATGTTTGGCCCATACCAGAGCCTGTTTTCAATGTGGAAAGGAGGGTCACATAGCTAAAGATTGCCAAGGAGGTTGCGCGAATGATTCTGGAAACCAACAGAGGAGACTAAGCATAGCAGATCGTCCTACTCAGAACTATCCTTCGACAAGAGCTTATGCCTTTACTGGCAAGGATATTGGGAATTCTGATGCGGCGGTGACAGGGGTGGACTTGATTGCCGCTTATAGGGTAAAAGATAGTCCTGTATTAGGAGTTAACCTAGAGACCTTAAGAGTGAAGTGCTTTGACAAGTGCATTACAAAGCCAGGGTCAAGCCTAAGTGGGAGCGAGAGTAGTTGCATCTCCAGGTGCATGGAACGCTATATTGAGGCCACCGGCATCGTCAGTAGAGCCCTGTTTAAGACACCACACTGAAAAGAAAAGGTTTTGCTGAAACATTATGAGGTCCATGTTTGATAATTCCCCGTTCGATATTTGTTATTTAGTTCTTTAATCTCATGGATATTTGTTATTTAGTTCTTTAATCTCATGGGTCTTTATTACGGATCCACTTGAACACTCTAATATCTTCTAAGACACGATCAACATCGAAGTCGATCATTACTATCGTTGAAATGTTTTTGTCATTCTCCTTTCTCTTTCTCGTCTTCTTTCTAATCAGCCCCACCACTGATCAAAA

Coding sequence (CDS)

ATGGATTCATTTTCATCGCCCTCAAGCGGTTCTTCTTCCCAATTTTCGCCCAACGAATTCAGGGACCAGCTCAAGACTCAGCTTGCTCAGGCGTACGCCGAGGAGTTTCTTGAGAGTATGCCACCTAGAACACGAGGTGGAGAAATTTGGGGACGACCCCCACCTAGGGGTAGAAGGAGTGTTAGAAGAGGTCGAGGTTCGAAACGGGATAATTCTGTAAACCAGCCCGATGTAACTGTGCCACTCCTACCACCAGCGATACCTCTGGCCGCACCAAACCCTACTGCTGCTCTAATAGAAGCATTGCAAGCTGTTGTGCAAATTATGATGACTACTCAACGTGCAAATGCTTCATCATCAACTAGACAAGCAAAGTGTTTGCGAGATTTCAAGAGGGTTGACCCTCAAACCTTTAATGGGTCTTCAGATGATCCAACTGAGACACAATTATGGTTGAGATCTATAGAGACCATGTTTGAGTTGATCAATTGCCCTGATGATCAGAAGGTGCGATGTGCAACATTCATGTTGCGTGATGATGCAGAGTTATGGTGGCAATCCACCAGCGAGATTATTAGTCCTGAGGGATGTGTAATCTCGTGGGCGGAATTCAAGGATGCCTTTATGGAAGAGTACTACTCTGAGGACATTCAACTTCGTATGCAGCAAAAGTTCACTCAACTGTGTCAAAGGGGGCGTTCTGTTACCACATATGCTAGGGAGTTCATCAGAATGAAACATTTTGCCCCGGAGTTGGTGAACACGGACTACAGAACAACATGGTGGTTCGTACGTGGGTTGGACAAGAGGATCCGCCATATTGTTGAGGCGATATCACCTGCTACCTATGCTGTTGCCTTGAGAGCAGCTAAGGCCATGGAGGGAGTTGAAGAATCTCCTGAACCCCCTCCACCGATAGTGAAACGAAAGCGACGTCATGACCAAGTTGACCGTCATGACCAAGTTGACCGTCATGACCAAGTTGACCGTCATGATCCATTGCCATCAAAGCCACAACGACGACCTGACAGACAGTACCGTTATACCAGGCGTGGTCAGCAAAGAAATGGAAGCCGACCAGATAATAGACCTCAGTGTAATGAATGTGGGAAAAATCACTGGGGTCGATGTTTGGCCCATACCAGAGCCTGTTTTCAATGTGGAAAGGAGGGTCACATAGCTAAAGATTGCCAAGGAGGTTGCGCGAATGATTCTGGAAACCAACAGAGGAGACTAAGCATAGCAGATCGTCCTACTCAGAACTATCCTTCGACAAGAGCTTATGCCTTTACTGGCAAGGATATTGGGAATTCTGATGCGGCGGTGACAGGGGTGGACTTGATTGCCGCTTATAGGGTAAAAGATAGTCCTGTATTAGGAGTTAACCTAGAGACCTTAAGAGTGAAGTGCTTTGACAAGTGCATTACAAAGCCAGGGTCAAGCCTAAGTGGGAGCGAGAGTAGTTGCATCTCCAGGTGCATGGAACGCTATATTGAGGCCACCGGCATCGTCAGTAGAGCCCTGTTTAAGACACCACACTGA

Protein sequence

MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLESMPPRTRGGEIWGRPPPRGRRSVRRGRGSKRDNSVNQPDVTVPLLPPAIPLAAPNPTAALIEALQAVVQIMMTTQRANASSSTRQAKCLRDFKRVDPQTFNGSSDDPTETQLWLRSIETMFELINCPDDQKVRCATFMLRDDAELWWQSTSEIISPEGCVISWAEFKDAFMEEYYSEDIQLRMQQKFTQLCQRGRSVTTYAREFIRMKHFAPELVNTDYRTTWWFVRGLDKRIRHIVEAISPATYAVALRAAKAMEGVEESPEPPPPIVKRKRRHDQVDRHDQVDRHDQVDRHDPLPSKPQRRPDRQYRYTRRGQQRNGSRPDNRPQCNECGKNHWGRCLAHTRACFQCGKEGHIAKDCQGGCANDSGNQQRRLSIADRPTQNYPSTRAYAFTGKDIGNSDAAVTGVDLIAAYRVKDSPVLGVNLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATGIVSRALFKTPH

Homology

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BLAST of CmoCh15G013960 vs. ExPASy Swiss-Prot
Match: Q9XH48 (Mitochondrial import inner membrane translocase subunit TIM13 OS=Arabidopsis thaliana OX=3702 GN=TIM13 PE=1 SV=2)

HSP 1 Score: 87.0 bits (214), Expect = 6.6e-16
Identity = 42/82 (51.22%), Postives = 60/82 (73.17%), Query Frame = 0


Query: 429 AFTGKDIGNSDAAVTGVDLIAAYRVKDSPVLGVNL-ETLRVKCFDKCITKPGSSLSGSES 488
           +++   +G S ++V+   ++ + + + +      L ETLR KCFDKC+TKPGSSL GSES
Sbjct: 3   SYSSPPMGGSGSSVSPEVMMESVKTQLAQAYAEELIETLRTKCFDKCVTKPGSSLGGSES 62

Query: 489 SCISRCMERYIEATGIVSRALF 510
           SCISRC+ERY+EAT I+SR+LF
Sbjct: 63  SCISRCVERYMEATAIISRSLF 84

[Close]

BLAST of CmoCh15G013960 vs. ExPASy Swiss-Prot
Match: Q9XGY5 (Mitochondrial import inner membrane translocase subunit Tim13 OS=Oryza sativa subsp. japonica OX=39947 GN=TIM13 PE=3 SV=2)

HSP 1 Score: 85.1 bits (209), Expect = 2.5e-15
Identity = 40/49 (81.63%), Postives = 45/49 (91.84%), Query Frame = 0


Query: 463 LETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATGIVSRALFKT 512
           LET+  KCF KC+TKPGSSLSGSESSCISRC++RYIEATGIVSRALF +
Sbjct: 34  LETVGNKCFAKCVTKPGSSLSGSESSCISRCVDRYIEATGIVSRALFSS 82

[Close]

BLAST of CmoCh15G013960 vs. ExPASy Swiss-Prot
Match: Q8AVK1 (Mitochondrial import inner membrane translocase subunit Tim13-B OS=Xenopus laevis OX=8355 GN=timm13-b PE=3 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 4.3e-07
Identity = 25/45 (55.56%), Postives = 32/45 (71.11%), Query Frame = 0


Query: 463 LETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATGIVSRA 508
           L+ +  KCF KCI KPG SL  SE  C++ CM+RY++A  IVSRA
Sbjct: 40  LQRMTDKCFRKCIGKPGGSLDNSEQKCVAMCMDRYMDAWNIVSRA 84

[Close]

BLAST of CmoCh15G013960 vs. ExPASy Swiss-Prot
Match: Q10481 (Mitochondrial import inner membrane translocase subunit tim13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=tim13 PE=3 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 4.3e-07
Identity = 24/47 (51.06%), Postives = 33/47 (70.21%), Query Frame = 0


Query: 460 GVNLETLRVKCFDKCITKPGSSLSGSESSCISRCMERYIEATGIVSR 507
           G  +  +   CFDKCI +PGS+   +E SC+S+CMERY++A  IVSR
Sbjct: 35  GELISKINENCFDKCIPEPGSTFDPNEKSCVSKCMERYMDAWNIVSR 81

[Close]

BLAST of CmoCh15G013960 vs. ExPASy Swiss-Prot
Match: Q4PGT2 (Mitochondrial import inner membrane translocase subunit TIM13 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=TIM13 PE=3 SV=2)

HSP 1 Score: 57.8 bits (138), Expect = 4.3e-07
Identity = 24/37 (64.86%), Postives = 29/37 (78.38%), Query Frame = 0


Query: 469 KCFDKCITKPGSSLSGSESSCISRCMERYIEATGIVS 506
           KC+ KCI  PG+SLSG E +C++RCMERY EA  IVS
Sbjct: 48  KCYSKCIPAPGASLSGKEQTCLTRCMERYFEAFNIVS 84

[Close]

BLAST of CmoCh15G013960 vs. ExPASy TrEMBL
Match: A0A6J1ELN8 (uncharacterized protein LOC111435758 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435758 PE=4 SV=1)

HSP 1 Score: 893.3 bits (2307), Expect = 4.9e-256
Identity = 443/443 (100.00%), Postives = 443/443 (100.00%), Query Frame = 0


Query: 1   MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLESMPPRTRGGEIWGRPPPRGRRS 60
           MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLESMPPRTRGGEIWGRPPPRGRRS
Sbjct: 1   MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLESMPPRTRGGEIWGRPPPRGRRS 60

Query: 61  VRRGRGSKRDNSVNQPDVTVPLLPPAIPLAAPNPTAALIEALQAVVQIMMTTQRANASSS 120
           VRRGRGSKRDNSVNQPDVTVPLLPPAIPLAAPNPTAALIEALQAVVQIMMTTQRANASSS
Sbjct: 61  VRRGRGSKRDNSVNQPDVTVPLLPPAIPLAAPNPTAALIEALQAVVQIMMTTQRANASSS 120

Query: 121 TRQAKCLRDFKRVDPQTFNGSSDDPTETQLWLRSIETMFELINCPDDQKVRCATFMLRDD 180
           TRQAKCLRDFKRVDPQTFNGSSDDPTETQLWLRSIETMFELINCPDDQKVRCATFMLRDD
Sbjct: 121 TRQAKCLRDFKRVDPQTFNGSSDDPTETQLWLRSIETMFELINCPDDQKVRCATFMLRDD 180

Query: 181 AELWWQSTSEIISPEGCVISWAEFKDAFMEEYYSEDIQLRMQQKFTQLCQRGRSVTTYAR 240
           AELWWQSTSEIISPEGCVISWAEFKDAFMEEYYSEDIQLRMQQKFTQLCQRGRSVTTYAR
Sbjct: 181 AELWWQSTSEIISPEGCVISWAEFKDAFMEEYYSEDIQLRMQQKFTQLCQRGRSVTTYAR 240

Query: 241 EFIRMKHFAPELVNTDYRTTWWFVRGLDKRIRHIVEAISPATYAVALRAAKAMEGVEESP 300
           EFIRMKHFAPELVNTDYRTTWWFVRGLDKRIRHIVEAISPATYAVALRAAKAMEGVEESP
Sbjct: 241 EFIRMKHFAPELVNTDYRTTWWFVRGLDKRIRHIVEAISPATYAVALRAAKAMEGVEESP 300

Query: 301 EPPPPIVKRKRRHDQVDRHDQVDRHDQVDRHDPLPSKPQRRPDRQYRYTRRGQQRNGSRP 360
           EPPPPIVKRKRRHDQVDRHDQVDRHDQVDRHDPLPSKPQRRPDRQYRYTRRGQQRNGSRP
Sbjct: 301 EPPPPIVKRKRRHDQVDRHDQVDRHDQVDRHDPLPSKPQRRPDRQYRYTRRGQQRNGSRP 360

Query: 361 DNRPQCNECGKNHWGRCLAHTRACFQCGKEGHIAKDCQGGCANDSGNQQRRLSIADRPTQ 420
           DNRPQCNECGKNHWGRCLAHTRACFQCGKEGHIAKDCQGGCANDSGNQQRRLSIADRPTQ
Sbjct: 361 DNRPQCNECGKNHWGRCLAHTRACFQCGKEGHIAKDCQGGCANDSGNQQRRLSIADRPTQ 420

Query: 421 NYPSTRAYAFTGKDIGNSDAAVT 444
           NYPSTRAYAFTGKDIGNSDAAVT
Sbjct: 421 NYPSTRAYAFTGKDIGNSDAAVT 443

[Close]

BLAST of CmoCh15G013960 vs. ExPASy TrEMBL
Match: A0A6J1EQW7 (uncharacterized protein LOC111435758 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111435758 PE=4 SV=1)

HSP 1 Score: 860.5 bits (2222), Expect = 3.5e-246
Identity = 431/443 (97.29%), Postives = 431/443 (97.29%), Query Frame = 0


Query: 1   MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLESMPPRTRGGEIWGRPPPRGRRS 60
           MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLESMPPRTRGGEIWGRPPPRGRRS
Sbjct: 1   MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLESMPPRTRGGEIWGRPPPRGRRS 60

Query: 61  VRRGRGSKRDNSVNQPDVTVPLLPPAIPLAAPNPTAALIEALQAVVQIMMTTQRANASSS 120
           VRRGRGSKRDNSVNQPDVTVPLLPPAIPLAAPNPTAALIEALQAVVQIMMTTQRANASSS
Sbjct: 61  VRRGRGSKRDNSVNQPDVTVPLLPPAIPLAAPNPTAALIEALQAVVQIMMTTQRANASSS 120

Query: 121 TRQAKCLRDFKRVDPQTFNGSSDDPTETQLWLRSIETMFELINCPDDQKVRCATFMLRDD 180
           TRQAKCLRDFKRVDPQTFNGSSDDPTETQLWLRSIETMFELINCPDDQKVRCATFMLRDD
Sbjct: 121 TRQAKCLRDFKRVDPQTFNGSSDDPTETQLWLRSIETMFELINCPDDQKVRCATFMLRDD 180

Query: 181 AELWWQSTSEIISPEGCVISWAEFKDAFMEEYYSEDIQLRMQQKFTQLCQRGRSVTTYAR 240
           AELWWQSTSEIISPEGCVISWAEFKDAFMEEYYSEDIQLRMQQKFTQLCQRGRSVTTYAR
Sbjct: 181 AELWWQSTSEIISPEGCVISWAEFKDAFMEEYYSEDIQLRMQQKFTQLCQRGRSVTTYAR 240

Query: 241 EFIRMKHFAPELVNTDYRTTWWFVRGLDKRIRHIVEAISPATYAVALRAAKAMEGVEESP 300
           EFIRMKHFAPELVNTDYRTTWWFVRGLDKRIRHIVEAISPATYAVALRAAKAMEGVEESP
Sbjct: 241 EFIRMKHFAPELVNTDYRTTWWFVRGLDKRIRHIVEAISPATYAVALRAAKAMEGVEESP 300

Query: 301 EPPPPIVKRKRRHDQVDRHDQVDRHDQVDRHDPLPSKPQRRPDRQYRYTRRGQQRNGSRP 360
           EPPPPIVKRKR            RHDQVDRHDPLPSKPQRRPDRQYRYTRRGQQRNGSRP
Sbjct: 301 EPPPPIVKRKR------------RHDQVDRHDPLPSKPQRRPDRQYRYTRRGQQRNGSRP 360

Query: 361 DNRPQCNECGKNHWGRCLAHTRACFQCGKEGHIAKDCQGGCANDSGNQQRRLSIADRPTQ 420
           DNRPQCNECGKNHWGRCLAHTRACFQCGKEGHIAKDCQGGCANDSGNQQRRLSIADRPTQ
Sbjct: 361 DNRPQCNECGKNHWGRCLAHTRACFQCGKEGHIAKDCQGGCANDSGNQQRRLSIADRPTQ 420

Query: 421 NYPSTRAYAFTGKDIGNSDAAVT 444
           NYPSTRAYAFTGKDIGNSDAAVT
Sbjct: 421 NYPSTRAYAFTGKDIGNSDAAVT 431

[Close]

BLAST of CmoCh15G013960 vs. ExPASy TrEMBL
Match: A0A6J1EMM2 (uncharacterized protein LOC111435758 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111435758 PE=4 SV=1)

HSP 1 Score: 823.2 bits (2125), Expect = 6.2e-235
Identity = 404/404 (100.00%), Postives = 404/404 (100.00%), Query Frame = 0


Query: 40  MPPRTRGGEIWGRPPPRGRRSVRRGRGSKRDNSVNQPDVTVPLLPPAIPLAAPNPTAALI 99
           MPPRTRGGEIWGRPPPRGRRSVRRGRGSKRDNSVNQPDVTVPLLPPAIPLAAPNPTAALI
Sbjct: 1   MPPRTRGGEIWGRPPPRGRRSVRRGRGSKRDNSVNQPDVTVPLLPPAIPLAAPNPTAALI 60

Query: 100 EALQAVVQIMMTTQRANASSSTRQAKCLRDFKRVDPQTFNGSSDDPTETQLWLRSIETMF 159
           EALQAVVQIMMTTQRANASSSTRQAKCLRDFKRVDPQTFNGSSDDPTETQLWLRSIETMF
Sbjct: 61  EALQAVVQIMMTTQRANASSSTRQAKCLRDFKRVDPQTFNGSSDDPTETQLWLRSIETMF 120

Query: 160 ELINCPDDQKVRCATFMLRDDAELWWQSTSEIISPEGCVISWAEFKDAFMEEYYSEDIQL 219
           ELINCPDDQKVRCATFMLRDDAELWWQSTSEIISPEGCVISWAEFKDAFMEEYYSEDIQL
Sbjct: 121 ELINCPDDQKVRCATFMLRDDAELWWQSTSEIISPEGCVISWAEFKDAFMEEYYSEDIQL 180

Query: 220 RMQQKFTQLCQRGRSVTTYAREFIRMKHFAPELVNTDYRTTWWFVRGLDKRIRHIVEAIS 279
           RMQQKFTQLCQRGRSVTTYAREFIRMKHFAPELVNTDYRTTWWFVRGLDKRIRHIVEAIS
Sbjct: 181 RMQQKFTQLCQRGRSVTTYAREFIRMKHFAPELVNTDYRTTWWFVRGLDKRIRHIVEAIS 240

Query: 280 PATYAVALRAAKAMEGVEESPEPPPPIVKRKRRHDQVDRHDQVDRHDQVDRHDPLPSKPQ 339
           PATYAVALRAAKAMEGVEESPEPPPPIVKRKRRHDQVDRHDQVDRHDQVDRHDPLPSKPQ
Sbjct: 241 PATYAVALRAAKAMEGVEESPEPPPPIVKRKRRHDQVDRHDQVDRHDQVDRHDPLPSKPQ 300

Query: 340 RRPDRQYRYTRRGQQRNGSRPDNRPQCNECGKNHWGRCLAHTRACFQCGKEGHIAKDCQG 399
           RRPDRQYRYTRRGQQRNGSRPDNRPQCNECGKNHWGRCLAHTRACFQCGKEGHIAKDCQG
Sbjct: 301 RRPDRQYRYTRRGQQRNGSRPDNRPQCNECGKNHWGRCLAHTRACFQCGKEGHIAKDCQG 360

Query: 400 GCANDSGNQQRRLSIADRPTQNYPSTRAYAFTGKDIGNSDAAVT 444
           GCANDSGNQQRRLSIADRPTQNYPSTRAYAFTGKDIGNSDAAVT
Sbjct: 361 GCANDSGNQQRRLSIADRPTQNYPSTRAYAFTGKDIGNSDAAVT 404

[Close]

BLAST of CmoCh15G013960 vs. ExPASy TrEMBL
Match: A0A6J1ET54 (uncharacterized protein LOC111435758 isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111435758 PE=4 SV=1)

HSP 1 Score: 631.7 bits (1628), Expect = 2.6e-177
Identity = 317/317 (100.00%), Postives = 317/317 (100.00%), Query Frame = 0


Query: 1   MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLESMPPRTRGGEIWGRPPPRGRRS 60
           MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLESMPPRTRGGEIWGRPPPRGRRS
Sbjct: 1   MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLESMPPRTRGGEIWGRPPPRGRRS 60

Query: 61  VRRGRGSKRDNSVNQPDVTVPLLPPAIPLAAPNPTAALIEALQAVVQIMMTTQRANASSS 120
           VRRGRGSKRDNSVNQPDVTVPLLPPAIPLAAPNPTAALIEALQAVVQIMMTTQRANASSS
Sbjct: 61  VRRGRGSKRDNSVNQPDVTVPLLPPAIPLAAPNPTAALIEALQAVVQIMMTTQRANASSS 120

Query: 121 TRQAKCLRDFKRVDPQTFNGSSDDPTETQLWLRSIETMFELINCPDDQKVRCATFMLRDD 180
           TRQAKCLRDFKRVDPQTFNGSSDDPTETQLWLRSIETMFELINCPDDQKVRCATFMLRDD
Sbjct: 121 TRQAKCLRDFKRVDPQTFNGSSDDPTETQLWLRSIETMFELINCPDDQKVRCATFMLRDD 180

Query: 181 AELWWQSTSEIISPEGCVISWAEFKDAFMEEYYSEDIQLRMQQKFTQLCQRGRSVTTYAR 240
           AELWWQSTSEIISPEGCVISWAEFKDAFMEEYYSEDIQLRMQQKFTQLCQRGRSVTTYAR
Sbjct: 181 AELWWQSTSEIISPEGCVISWAEFKDAFMEEYYSEDIQLRMQQKFTQLCQRGRSVTTYAR 240

Query: 241 EFIRMKHFAPELVNTDYRTTWWFVRGLDKRIRHIVEAISPATYAVALRAAKAMEGVEESP 300
           EFIRMKHFAPELVNTDYRTTWWFVRGLDKRIRHIVEAISPATYAVALRAAKAMEGVEESP
Sbjct: 241 EFIRMKHFAPELVNTDYRTTWWFVRGLDKRIRHIVEAISPATYAVALRAAKAMEGVEESP 300

Query: 301 EPPPPIVKRKRRHDQVD 318
           EPPPPIVKRKRRHDQVD
Sbjct: 301 EPPPPIVKRKRRHDQVD 317

[Close]

BLAST of CmoCh15G013960 vs. ExPASy TrEMBL
Match: A0A6J1FDR9 (uncharacterized protein LOC111444463 OS=Cucurbita moschata OX=3662 GN=LOC111444463 PE=4 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 7.1e-106
Identity = 211/370 (57.03%), Postives = 251/370 (67.84%), Query Frame = 0


Query: 40  MPPRTRGGEIWGRPPPRGRRSVRRGRGSKRDNSVNQPDVTVPLLPPAIPLAAPNPTAALI 99
           MPPRTRGG + GRPP +G R   RG   +R+N V QP   VP  PPA P AAPNPTAAL+
Sbjct: 1   MPPRTRGGGLRGRPPLKG-RGRGRGHNGRRENFVEQP---VP--PPAAPQAAPNPTAALV 60

Query: 100 EALQAVVQIMMTTQRANASSSTRQAKCLRDFKRVDPQTFNGSSDDPTETQLWLRSIETMF 159
           +ALQ V+Q +   Q+ANAS+ST +AK LRDFKR DP+TF G+SDDPT  Q+WLRSIET+F
Sbjct: 61  DALQVVIQNLTANQQANASTSTMEAKYLRDFKRGDPRTFKGTSDDPTVAQMWLRSIETVF 120

Query: 160 ELINCPDDQKVRCATFMLRDDAELWWQSTSEIISPEGCVISWAEFKDAFMEEYYSEDIQL 219
            L NCP+  +V CATFMLR DAELWWQ+T +IISPEG  +SW EFK AF EEYY ED+QL
Sbjct: 121 WLTNCPEAHRVECATFMLRKDAELWWQATRDIISPEGGAVSWVEFKSAFTEEYYPEDVQL 180

Query: 220 RMQQKFTQLCQRGRSVTTYAREFIRMKHFAPELVNTDYRTTWWFVRGLDKRIRHIVEAIS 279
           R QQ+FTQL QRG SV TYAREF ++K FAPELVNTDYRT   FV GLD +IR  VEAI+
Sbjct: 181 RKQQEFTQLSQRGHSVKTYAREFSKLKRFAPELVNTDYRTARRFVLGLDTKIRKTVEAIA 240

Query: 280 PATYAVALRAAKAMEGVEESPEPPPPIVKRKRRHDQVDRHDQVDRHDQVDRHDPLPSKPQ 339
           PATYAVALRAAK+MEG++ S E     V +KRRH+                         
Sbjct: 241 PATYAVALRAAKSMEGLDSSHETLSSSVGQKRRHE------------------------- 300

Query: 340 RRPDRQYRYTRRGQQRNGSRPDNRPQCNECGKNHWGRCLAHTRACFQCGKEGHIAKDCQG 399
                           + +  D +P+CN+CGKNHW +CL H RACF+CGKE H+AKDC G
Sbjct: 301 ----------------HENELDGKPKCNKCGKNHWDKCLGHIRACFRCGKEDHMAKDCSG 323

Query: 400 GCANDSGNQQ 410
           G   DS N +
Sbjct: 361 GGTKDSKNNR 323

[Close]

BLAST of CmoCh15G013960 vs. NCBI nr
Match: XP_022929047.1 (uncharacterized protein LOC111435758 isoform X1 [Cucurbita moschata])

HSP 1 Score: 893.3 bits (2307), Expect = 1.0e-255
Identity = 443/443 (100.00%), Postives = 443/443 (100.00%), Query Frame = 0


Query: 1   MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLESMPPRTRGGEIWGRPPPRGRRS 60
           MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLESMPPRTRGGEIWGRPPPRGRRS
Sbjct: 1   MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLESMPPRTRGGEIWGRPPPRGRRS 60

Query: 61  VRRGRGSKRDNSVNQPDVTVPLLPPAIPLAAPNPTAALIEALQAVVQIMMTTQRANASSS 120
           VRRGRGSKRDNSVNQPDVTVPLLPPAIPLAAPNPTAALIEALQAVVQIMMTTQRANASSS
Sbjct: 61  VRRGRGSKRDNSVNQPDVTVPLLPPAIPLAAPNPTAALIEALQAVVQIMMTTQRANASSS 120

Query: 121 TRQAKCLRDFKRVDPQTFNGSSDDPTETQLWLRSIETMFELINCPDDQKVRCATFMLRDD 180
           TRQAKCLRDFKRVDPQTFNGSSDDPTETQLWLRSIETMFELINCPDDQKVRCATFMLRDD
Sbjct: 121 TRQAKCLRDFKRVDPQTFNGSSDDPTETQLWLRSIETMFELINCPDDQKVRCATFMLRDD 180

Query: 181 AELWWQSTSEIISPEGCVISWAEFKDAFMEEYYSEDIQLRMQQKFTQLCQRGRSVTTYAR 240
           AELWWQSTSEIISPEGCVISWAEFKDAFMEEYYSEDIQLRMQQKFTQLCQRGRSVTTYAR
Sbjct: 181 AELWWQSTSEIISPEGCVISWAEFKDAFMEEYYSEDIQLRMQQKFTQLCQRGRSVTTYAR 240

Query: 241 EFIRMKHFAPELVNTDYRTTWWFVRGLDKRIRHIVEAISPATYAVALRAAKAMEGVEESP 300
           EFIRMKHFAPELVNTDYRTTWWFVRGLDKRIRHIVEAISPATYAVALRAAKAMEGVEESP
Sbjct: 241 EFIRMKHFAPELVNTDYRTTWWFVRGLDKRIRHIVEAISPATYAVALRAAKAMEGVEESP 300

Query: 301 EPPPPIVKRKRRHDQVDRHDQVDRHDQVDRHDPLPSKPQRRPDRQYRYTRRGQQRNGSRP 360
           EPPPPIVKRKRRHDQVDRHDQVDRHDQVDRHDPLPSKPQRRPDRQYRYTRRGQQRNGSRP
Sbjct: 301 EPPPPIVKRKRRHDQVDRHDQVDRHDQVDRHDPLPSKPQRRPDRQYRYTRRGQQRNGSRP 360

Query: 361 DNRPQCNECGKNHWGRCLAHTRACFQCGKEGHIAKDCQGGCANDSGNQQRRLSIADRPTQ 420
           DNRPQCNECGKNHWGRCLAHTRACFQCGKEGHIAKDCQGGCANDSGNQQRRLSIADRPTQ
Sbjct: 361 DNRPQCNECGKNHWGRCLAHTRACFQCGKEGHIAKDCQGGCANDSGNQQRRLSIADRPTQ 420

Query: 421 NYPSTRAYAFTGKDIGNSDAAVT 444
           NYPSTRAYAFTGKDIGNSDAAVT
Sbjct: 421 NYPSTRAYAFTGKDIGNSDAAVT 443

[Close]

BLAST of CmoCh15G013960 vs. NCBI nr
Match: XP_022929048.1 (uncharacterized protein LOC111435758 isoform X2 [Cucurbita moschata])

HSP 1 Score: 860.5 bits (2222), Expect = 7.2e-246
Identity = 431/443 (97.29%), Postives = 431/443 (97.29%), Query Frame = 0


Query: 1   MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLESMPPRTRGGEIWGRPPPRGRRS 60
           MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLESMPPRTRGGEIWGRPPPRGRRS
Sbjct: 1   MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLESMPPRTRGGEIWGRPPPRGRRS 60

Query: 61  VRRGRGSKRDNSVNQPDVTVPLLPPAIPLAAPNPTAALIEALQAVVQIMMTTQRANASSS 120
           VRRGRGSKRDNSVNQPDVTVPLLPPAIPLAAPNPTAALIEALQAVVQIMMTTQRANASSS
Sbjct: 61  VRRGRGSKRDNSVNQPDVTVPLLPPAIPLAAPNPTAALIEALQAVVQIMMTTQRANASSS 120

Query: 121 TRQAKCLRDFKRVDPQTFNGSSDDPTETQLWLRSIETMFELINCPDDQKVRCATFMLRDD 180
           TRQAKCLRDFKRVDPQTFNGSSDDPTETQLWLRSIETMFELINCPDDQKVRCATFMLRDD
Sbjct: 121 TRQAKCLRDFKRVDPQTFNGSSDDPTETQLWLRSIETMFELINCPDDQKVRCATFMLRDD 180

Query: 181 AELWWQSTSEIISPEGCVISWAEFKDAFMEEYYSEDIQLRMQQKFTQLCQRGRSVTTYAR 240
           AELWWQSTSEIISPEGCVISWAEFKDAFMEEYYSEDIQLRMQQKFTQLCQRGRSVTTYAR
Sbjct: 181 AELWWQSTSEIISPEGCVISWAEFKDAFMEEYYSEDIQLRMQQKFTQLCQRGRSVTTYAR 240

Query: 241 EFIRMKHFAPELVNTDYRTTWWFVRGLDKRIRHIVEAISPATYAVALRAAKAMEGVEESP 300
           EFIRMKHFAPELVNTDYRTTWWFVRGLDKRIRHIVEAISPATYAVALRAAKAMEGVEESP
Sbjct: 241 EFIRMKHFAPELVNTDYRTTWWFVRGLDKRIRHIVEAISPATYAVALRAAKAMEGVEESP 300

Query: 301 EPPPPIVKRKRRHDQVDRHDQVDRHDQVDRHDPLPSKPQRRPDRQYRYTRRGQQRNGSRP 360
           EPPPPIVKRKR            RHDQVDRHDPLPSKPQRRPDRQYRYTRRGQQRNGSRP
Sbjct: 301 EPPPPIVKRKR------------RHDQVDRHDPLPSKPQRRPDRQYRYTRRGQQRNGSRP 360

Query: 361 DNRPQCNECGKNHWGRCLAHTRACFQCGKEGHIAKDCQGGCANDSGNQQRRLSIADRPTQ 420
           DNRPQCNECGKNHWGRCLAHTRACFQCGKEGHIAKDCQGGCANDSGNQQRRLSIADRPTQ
Sbjct: 361 DNRPQCNECGKNHWGRCLAHTRACFQCGKEGHIAKDCQGGCANDSGNQQRRLSIADRPTQ 420

Query: 421 NYPSTRAYAFTGKDIGNSDAAVT 444
           NYPSTRAYAFTGKDIGNSDAAVT
Sbjct: 421 NYPSTRAYAFTGKDIGNSDAAVT 431

[Close]

BLAST of CmoCh15G013960 vs. NCBI nr
Match: XP_022929049.1 (uncharacterized protein LOC111435758 isoform X3 [Cucurbita moschata])

HSP 1 Score: 823.2 bits (2125), Expect = 1.3e-234
Identity = 404/404 (100.00%), Postives = 404/404 (100.00%), Query Frame = 0


Query: 40  MPPRTRGGEIWGRPPPRGRRSVRRGRGSKRDNSVNQPDVTVPLLPPAIPLAAPNPTAALI 99
           MPPRTRGGEIWGRPPPRGRRSVRRGRGSKRDNSVNQPDVTVPLLPPAIPLAAPNPTAALI
Sbjct: 1   MPPRTRGGEIWGRPPPRGRRSVRRGRGSKRDNSVNQPDVTVPLLPPAIPLAAPNPTAALI 60

Query: 100 EALQAVVQIMMTTQRANASSSTRQAKCLRDFKRVDPQTFNGSSDDPTETQLWLRSIETMF 159
           EALQAVVQIMMTTQRANASSSTRQAKCLRDFKRVDPQTFNGSSDDPTETQLWLRSIETMF
Sbjct: 61  EALQAVVQIMMTTQRANASSSTRQAKCLRDFKRVDPQTFNGSSDDPTETQLWLRSIETMF 120

Query: 160 ELINCPDDQKVRCATFMLRDDAELWWQSTSEIISPEGCVISWAEFKDAFMEEYYSEDIQL 219
           ELINCPDDQKVRCATFMLRDDAELWWQSTSEIISPEGCVISWAEFKDAFMEEYYSEDIQL
Sbjct: 121 ELINCPDDQKVRCATFMLRDDAELWWQSTSEIISPEGCVISWAEFKDAFMEEYYSEDIQL 180

Query: 220 RMQQKFTQLCQRGRSVTTYAREFIRMKHFAPELVNTDYRTTWWFVRGLDKRIRHIVEAIS 279
           RMQQKFTQLCQRGRSVTTYAREFIRMKHFAPELVNTDYRTTWWFVRGLDKRIRHIVEAIS
Sbjct: 181 RMQQKFTQLCQRGRSVTTYAREFIRMKHFAPELVNTDYRTTWWFVRGLDKRIRHIVEAIS 240

Query: 280 PATYAVALRAAKAMEGVEESPEPPPPIVKRKRRHDQVDRHDQVDRHDQVDRHDPLPSKPQ 339
           PATYAVALRAAKAMEGVEESPEPPPPIVKRKRRHDQVDRHDQVDRHDQVDRHDPLPSKPQ
Sbjct: 241 PATYAVALRAAKAMEGVEESPEPPPPIVKRKRRHDQVDRHDQVDRHDQVDRHDPLPSKPQ 300

Query: 340 RRPDRQYRYTRRGQQRNGSRPDNRPQCNECGKNHWGRCLAHTRACFQCGKEGHIAKDCQG 399
           RRPDRQYRYTRRGQQRNGSRPDNRPQCNECGKNHWGRCLAHTRACFQCGKEGHIAKDCQG
Sbjct: 301 RRPDRQYRYTRRGQQRNGSRPDNRPQCNECGKNHWGRCLAHTRACFQCGKEGHIAKDCQG 360

Query: 400 GCANDSGNQQRRLSIADRPTQNYPSTRAYAFTGKDIGNSDAAVT 444
           GCANDSGNQQRRLSIADRPTQNYPSTRAYAFTGKDIGNSDAAVT
Sbjct: 361 GCANDSGNQQRRLSIADRPTQNYPSTRAYAFTGKDIGNSDAAVT 404

[Close]

BLAST of CmoCh15G013960 vs. NCBI nr
Match: XP_022929050.1 (uncharacterized protein LOC111435758 isoform X4 [Cucurbita moschata])

HSP 1 Score: 631.7 bits (1628), Expect = 5.5e-177
Identity = 317/317 (100.00%), Postives = 317/317 (100.00%), Query Frame = 0


Query: 1   MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLESMPPRTRGGEIWGRPPPRGRRS 60
           MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLESMPPRTRGGEIWGRPPPRGRRS
Sbjct: 1   MDSFSSPSSGSSSQFSPNEFRDQLKTQLAQAYAEEFLESMPPRTRGGEIWGRPPPRGRRS 60

Query: 61  VRRGRGSKRDNSVNQPDVTVPLLPPAIPLAAPNPTAALIEALQAVVQIMMTTQRANASSS 120
           VRRGRGSKRDNSVNQPDVTVPLLPPAIPLAAPNPTAALIEALQAVVQIMMTTQRANASSS
Sbjct: 61  VRRGRGSKRDNSVNQPDVTVPLLPPAIPLAAPNPTAALIEALQAVVQIMMTTQRANASSS 120

Query: 121 TRQAKCLRDFKRVDPQTFNGSSDDPTETQLWLRSIETMFELINCPDDQKVRCATFMLRDD 180
           TRQAKCLRDFKRVDPQTFNGSSDDPTETQLWLRSIETMFELINCPDDQKVRCATFMLRDD
Sbjct: 121 TRQAKCLRDFKRVDPQTFNGSSDDPTETQLWLRSIETMFELINCPDDQKVRCATFMLRDD 180

Query: 181 AELWWQSTSEIISPEGCVISWAEFKDAFMEEYYSEDIQLRMQQKFTQLCQRGRSVTTYAR 240
           AELWWQSTSEIISPEGCVISWAEFKDAFMEEYYSEDIQLRMQQKFTQLCQRGRSVTTYAR
Sbjct: 181 AELWWQSTSEIISPEGCVISWAEFKDAFMEEYYSEDIQLRMQQKFTQLCQRGRSVTTYAR 240

Query: 241 EFIRMKHFAPELVNTDYRTTWWFVRGLDKRIRHIVEAISPATYAVALRAAKAMEGVEESP 300
           EFIRMKHFAPELVNTDYRTTWWFVRGLDKRIRHIVEAISPATYAVALRAAKAMEGVEESP
Sbjct: 241 EFIRMKHFAPELVNTDYRTTWWFVRGLDKRIRHIVEAISPATYAVALRAAKAMEGVEESP 300

Query: 301 EPPPPIVKRKRRHDQVD 318
           EPPPPIVKRKRRHDQVD
Sbjct: 301 EPPPPIVKRKRRHDQVD 317

[Close]

BLAST of CmoCh15G013960 vs. NCBI nr
Match: XP_023520277.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111783585 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 402.1 bits (1032), Expect = 7.0e-108
Identity = 227/423 (53.66%), Postives = 278/423 (65.72%), Query Frame = 0


Query: 63  RGRGSKRDNSVNQPDVTVPLLPPAIPLAAPNPTAALIEALQAVVQIMMTTQRANASSSTR 122
           RGR  +R++SV Q     P+ P A P AAP+PTAAL+ ALQ V+Q +   Q+ANAS+ST 
Sbjct: 7   RGRNGRREDSVEQ-----PIPPLAAPQAAPDPTAALVNALQTVIQNLTANQQANASTSTM 66

Query: 123 QAKCLRDFKRVDPQTFNGSSDDPTETQLWLRSIETMFELINCPDDQKVRCATFMLRDDAE 182
           +A+ LRDFKR DP+TF G+S+DPT  Q+WLRSIE++F L NCP+  +V CATFMLRDDAE
Sbjct: 67  EARYLRDFKRGDPRTFKGASEDPTVAQMWLRSIESVFVLTNCPEAHRVECATFMLRDDAE 126

Query: 183 LWWQSTSEIISPEGCVISWAEFKDAFMEEYYSEDIQLRMQQKFTQLCQRGRSVTTYAREF 242
           LWWQ+T ++ISPEG  ISW EFKDAF EEYY ED+QLR QQ+FTQL QRGR+VTTYA+EF
Sbjct: 127 LWWQATRDLISPEGGAISWVEFKDAFSEEYYPEDVQLRKQQEFTQLSQRGRTVTTYAKEF 186

Query: 243 IRMKHFAPEL--------VNTDYRTTWWFVRGLDK-------RIRHIVEAISPATYAVAL 302
            ++K FA +L        ++   RT   + +   K        IR+ VEAI P TYA AL
Sbjct: 187 SKLKRFAXQLRKQQEFTQLSQRGRTVTTYAKEFSKLKRFAQELIRNTVEAIVPTTYAAAL 246

Query: 303 RAAKAMEGVEESPEPPPPIVKRKRRHDQVDRHDQVDRHDQVDRHDPLPSKPQRRPDRQYR 362
           RAAKAMEG + S EP                                PS P RR DRQ R
Sbjct: 247 RAAKAMEGPDSSREP--------------------------------PSSP-RRSDRQRR 306

Query: 363 YTRRGQQRNGSRPDNRPQCNECGKNHWGRCLAHTRACFQCGKEGHIAKDCQGGCANDSGN 422
             RR QQ + +R ++RP+C +CGKNHWG+CLA + ACF+CGKEGH+AKDC     +D GN
Sbjct: 307 DYRREQQGSENRSESRPKCKDCGKNHWGQCLARSGACFRCGKEGHLAKDCPRNHTSDVGN 366

Query: 423 QQRRLSIADRPTQNYPSTRAYAFTGKDIGNSDAAVT----GVDLIAAYRVKDSPVL--GV 465
           QQ+ L  AD P  N P  RAYA T KD GN DAAVT    GV++IAAYRVKDS VL  GV
Sbjct: 367 QQKPLRTADNPPPNRPPARAYASTSKDTGNPDAAVTGTPAGVNMIAAYRVKDSHVLVSGV 391

[Close]

BLAST of CmoCh15G013960 vs. TAIR 10
Match: AT1G61570.1 (translocase of the inner mitochondrial membrane 13 )

HSP 1 Score: 87.0 bits (214), Expect = 4.7e-17
Identity = 42/82 (51.22%), Postives = 60/82 (73.17%), Query Frame = 0


Query: 429 AFTGKDIGNSDAAVTGVDLIAAYRVKDSPVLGVNL-ETLRVKCFDKCITKPGSSLSGSES 488
           +++   +G S ++V+   ++ + + + +      L ETLR KCFDKC+TKPGSSL GSES
Sbjct: 3   SYSSPPMGGSGSSVSPEVMMESVKTQLAQAYAEELIETLRTKCFDKCVTKPGSSLGGSES 62

Query: 489 SCISRCMERYIEATGIVSRALF 510
           SCISRC+ERY+EAT I+SR+LF
Sbjct: 63  SCISRCVERYMEATAIISRSLF 84

[Close]

BLAST of CmoCh15G013960 vs. TAIR 10
Match: AT5G50810.1 (translocase inner membrane subunit 8 )

HSP 1 Score: 45.8 bits (107), Expect = 1.2e-04
Identity = 19/38 (50.00%), Postives = 28/38 (73.68%), Query Frame = 0


Query: 470 CFDKCITK-PGSSLSGSESSCISRCMERYIEATGIVSR 507
           C+DKCIT  PGS  S SESSC++ C +RY++ + I+ +
Sbjct: 35  CWDKCITSAPGSKFSSSESSCLTHCAQRYMDMSMIIMK 72

The following BLAST results are available for this feature:

BLAST of CmoCh15G013960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XH48	6.6e-16	51.22	Mitochondrial import inner membrane translocase subunit TIM13 OS=Arabidopsis tha...	[more]
Q9XGY5	2.5e-15	81.63	Mitochondrial import inner membrane translocase subunit Tim13 OS=Oryza sativa su...	[more]
Q8AVK1	4.3e-07	55.56	Mitochondrial import inner membrane translocase subunit Tim13-B OS=Xenopus laevi...	[more]
Q10481	4.3e-07	51.06	Mitochondrial import inner membrane translocase subunit tim13 OS=Schizosaccharom...	[more]
Q4PGT2	4.3e-07	64.86	Mitochondrial import inner membrane translocase subunit TIM13 OS=Ustilago maydis...	[more]

BLAST of CmoCh15G013960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ELN8	4.9e-256	100.00	uncharacterized protein LOC111435758 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1EQW7	3.5e-246	97.29	uncharacterized protein LOC111435758 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1EMM2	6.2e-235	100.00	uncharacterized protein LOC111435758 isoform X3 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1ET54	2.6e-177	100.00	uncharacterized protein LOC111435758 isoform X4 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1FDR9	7.1e-106	57.03	uncharacterized protein LOC111444463 OS=Cucurbita moschata OX=3662 GN=LOC1114444...	[more]

BLAST of CmoCh15G013960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022929047.1	1.0e-255	100.00	uncharacterized protein LOC111435758 isoform X1 [Cucurbita moschata]	[more]
XP_022929048.1	7.2e-246	97.29	uncharacterized protein LOC111435758 isoform X2 [Cucurbita moschata]	[more]
XP_022929049.1	1.3e-234	100.00	uncharacterized protein LOC111435758 isoform X3 [Cucurbita moschata]	[more]
XP_022929050.1	5.5e-177	100.00	uncharacterized protein LOC111435758 isoform X4 [Cucurbita moschata]	[more]
XP_023520277.1	7.0e-108	53.66	LOW QUALITY PROTEIN: uncharacterized protein LOC111783585 [Cucurbita pepo subsp....	[more]

BLAST of CmoCh15G013960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G61570.1	4.7e-17	51.22	translocase of the inner mitochondrial membrane 13	[more]
AT5G50810.1	1.2e-04	50.00	translocase inner membrane subunit 8	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 383..399 e-value: 4.9E-4 score: 29.4
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 382..397 e-value: 1.2E-5 score: 25.1
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 384..397 score: 10.888928
None	No IPR available	GENE3D	4.10.60.10		coord: 379..425 e-value: 3.3E-5 score: 26.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 294..366
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 303..357
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..79
None	No IPR available	PANTHER	PTHR19338:SF14	OSJNBA0064M23.16 PROTEIN	coord: 463..513
None	No IPR available	PANTHER	PTHR19338:SF14	OSJNBA0064M23.16 PROTEIN	coord: 5..40
IPR035427	Tim10-like domain superfamily	GENE3D	1.10.287.810	Mitochondrial import inner membrane translocase subunit tim13 like domains	coord: 462..512 e-value: 4.7E-16 score: 60.1
IPR035427	Tim10-like domain superfamily	SUPERFAMILY	144122	Tim10-like	coord: 465..510
IPR004217	Tim10-like	PFAM	PF02953	zf-Tim10_DDP	coord: 466..508 e-value: 2.6E-15 score: 55.8
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 172..268 e-value: 5.0E-12 score: 45.9
IPR039238	Mitochondrial import inner membrane translocase subunit Tim8/13	PANTHER	PTHR19338	TRANSLOCASE OF INNER MITOCHONDRIAL MEMBRANE 13 HOMOLOG	coord: 5..40
IPR039238	Mitochondrial import inner membrane translocase subunit Tim8/13	PANTHER	PTHR19338	TRANSLOCASE OF INNER MITOCHONDRIAL MEMBRANE 13 HOMOLOG	coord: 463..513

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh15G013960.1	CmoCh15G013960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005758	mitochondrial intermembrane space
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding