CmoCh15G013220 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh15G013220
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	LEA_2 domain-containing protein
Location	Cmo_Chr15: 9082841 .. 9083479 (+)
RNA-Seq Expression	CmoCh15G013220
Synteny	CmoCh15G013220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGACGACAGCCAGAGCTTCCCAATAGCGCACTACCAAGCTCACCACAAATCCGACGAAGAACAACACCGACACCTCACAACATTCAAAGCCCTAAAAAAGGAACGCTCCAACAAATGCTTCATCTACGTCTTCTCCGCCTTCGTCTTCCTCTCCGTCGCCGTTTTAATCTTCGCTCTCATCGTCCTCCGCGTCAATTCCCCTGCTCTCCACTTCTCCTCTCTCTCCGTCGCCAAATTCTCCCTCTCCAACACCAATTCCTCTTCCCCCTCCCTTAACCTCACCGTCACCGCCCAACTCGCCGTCGACAATTCCAACTTCGGCCCCTTCAATTTCGACCACGCCTCTGTCGGTTTCATCTACGCCGGTGCCATCGTCGGCCAGAGCACTACCGGCGCCGGCAGAGCCAAGGCCAAAGGCACCAAAACCATGAATGTCACCGTCCATGCTTCCGCCAAGAACATCAGCGCCGATTACAACAATTCCCGGCTGTTGAATCTCAGTAGCTTTGCGAATTTGAGAGGCAGAGTCCGATTGATTCATATTTTCCGGCGGAGGGCCTCGTCGGAGATTAGGTGTTCCATGATCCTGGATTTGAATACTCATCAAATTCAGCATAATTGGGTTTGCGAGTAG

mRNA sequence

ATGGCGGACGACAGCCAGAGCTTCCCAATAGCGCACTACCAAGCTCACCACAAATCCGACGAAGAACAACACCGACACCTCACAACATTCAAAGCCCTAAAAAAGGAACGCTCCAACAAATGCTTCATCTACGTCTTCTCCGCCTTCGTCTTCCTCTCCGTCGCCGTTTTAATCTTCGCTCTCATCGTCCTCCGCGTCAATTCCCCTGCTCTCCACTTCTCCTCTCTCTCCGTCGCCAAATTCTCCCTCTCCAACACCAATTCCTCTTCCCCCTCCCTTAACCTCACCGTCACCGCCCAACTCGCCGTCGACAATTCCAACTTCGGCCCCTTCAATTTCGACCACGCCTCTGTCGGTTTCATCTACGCCGGTGCCATCGTCGGCCAGAGCACTACCGGCGCCGGCAGAGCCAAGGCCAAAGGCACCAAAACCATGAATGTCACCGTCCATGCTTCCGCCAAGAACATCAGCGCCGATTACAACAATTCCCGGCTGTTGAATCTCAGTAGCTTTGCGAATTTGAGAGGCAGAGTCCGATTGATTCATATTTTCCGGCGGAGGGCCTCGTCGGAGATTAGGTGTTCCATGATCCTGGATTTGAATACTCATCAAATTCAGCATAATTGGGTTTGCGAGTAG

Coding sequence (CDS)

ATGGCGGACGACAGCCAGAGCTTCCCAATAGCGCACTACCAAGCTCACCACAAATCCGACGAAGAACAACACCGACACCTCACAACATTCAAAGCCCTAAAAAAGGAACGCTCCAACAAATGCTTCATCTACGTCTTCTCCGCCTTCGTCTTCCTCTCCGTCGCCGTTTTAATCTTCGCTCTCATCGTCCTCCGCGTCAATTCCCCTGCTCTCCACTTCTCCTCTCTCTCCGTCGCCAAATTCTCCCTCTCCAACACCAATTCCTCTTCCCCCTCCCTTAACCTCACCGTCACCGCCCAACTCGCCGTCGACAATTCCAACTTCGGCCCCTTCAATTTCGACCACGCCTCTGTCGGTTTCATCTACGCCGGTGCCATCGTCGGCCAGAGCACTACCGGCGCCGGCAGAGCCAAGGCCAAAGGCACCAAAACCATGAATGTCACCGTCCATGCTTCCGCCAAGAACATCAGCGCCGATTACAACAATTCCCGGCTGTTGAATCTCAGTAGCTTTGCGAATTTGAGAGGCAGAGTCCGATTGATTCATATTTTCCGGCGGAGGGCCTCGTCGGAGATTAGGTGTTCCATGATCCTGGATTTGAATACTCATCAAATTCAGCATAATTGGGTTTGCGAGTAG

Protein sequence

MADDSQSFPIAHYQAHHKSDEEQHRHLTTFKALKKERSNKCFIYVFSAFVFLSVAVLIFALIVLRVNSPALHFSSLSVAKFSLSNTNSSSPSLNLTVTAQLAVDNSNFGPFNFDHASVGFIYAGAIVGQSTTGAGRAKAKGTKTMNVTVHASAKNISADYNNSRLLNLSSFANLRGRVRLIHIFRRRASSEIRCSMILDLNTHQIQHNWVCE

Homology

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BLAST of CmoCh15G013220 vs. ExPASy Swiss-Prot
Match: Q6DST1 (Late embryogenesis abundant protein At1g64065 OS=Arabidopsis thaliana OX=3702 GN=At1g64065 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.6e-08
Identity = 62/217 (28.57%), Postives = 107/217 (49.31%), Query Frame = 0


Query: 4   DSQSFPIAHYQAHHKSDEEQHRHLTTFKALKKERSNKCFIYVFSAFVFLSVAVLIFALIV 63
           D     +A  + + +SDEEQ      ++   +E   KC +Y  +  V +    LI + I 
Sbjct: 3   DEDRITLAPTEIYGRSDEEQSGP-RIWRRKTEEPPGKCLVYSLTIIVIIFALCLILSSIF 62

Query: 64  LRVNSPALHFSSLSVAKFSLSNTNSSSPSLNLTVTAQLAVDNSNFGPFNFDHASVGFIYA 123
           LR++ P +   S+S      S  NS++P  N T+ + +++ NSNFG F F+ +++  +YA
Sbjct: 63  LRISKPEIETRSISTRDLR-SGGNSTNPYFNATLVSDISIRNSNFGAFEFEDSTLRVVYA 122

Query: 124 G-AIVGQSTTGAGRAKA-KGTKTMNVTVHASA------KNISADYNNSRLLNLSSFANLR 183
              +VG++     R +A K  +   V V   +      K++  D      L L S A +R
Sbjct: 123 DHGVVGETKIEGRRVEAHKTVRITGVVVEIGSFRLLDTKDLDKDLRLG-FLELRSVAEVR 182

Query: 184 GRVRLIHIFRRRASSEIRCSMILDLNTHQIQHNWVCE 213
           GR++++   +R   S + C+M L+L    IQ N +CE
Sbjct: 183 GRIKVLG-RKRWKVSVMSCTMRLNLTGRFIQ-NLLCE 214

[Close]

BLAST of CmoCh15G013220 vs. ExPASy TrEMBL
Match: A0A6J1I3M2 (uncharacterized protein LOC111468875 OS=Cucurbita maxima OX=3661 GN=LOC111468875 PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 2.3e-103
Identity = 205/212 (96.70%), Postives = 208/212 (98.11%), Query Frame = 0


Query: 1   MADDSQSFPIAHYQAHHKSDEEQHRHLTTFKALKKERSNKCFIYVFSAFVFLSVAVLIFA 60
           MADDSQSFPIAHY+AHHKSDEEQ RHLTTFKAL+KERSNKCFIYVFSAFVFLSVAVLIFA
Sbjct: 1   MADDSQSFPIAHYKAHHKSDEEQRRHLTTFKALQKERSNKCFIYVFSAFVFLSVAVLIFA 60

Query: 61  LIVLRVNSPALHFSSLSVAKFSLSNTNSSSPSLNLTVTAQLAVDNSNFGPFNFDHASVGF 120
           LIVLRVNSPALHFSSLSVAKFSLSNTNSSSPSLNLTVTAQLAVDNSNFGPFNFD+ASVGF
Sbjct: 61  LIVLRVNSPALHFSSLSVAKFSLSNTNSSSPSLNLTVTAQLAVDNSNFGPFNFDYASVGF 120

Query: 121 IYAGAIVGQSTTGAGRAKAKGTKTMNVTVHASAKNISADYNNSRLLNLSSFANLRGRVRL 180
           IYAGAIVGQSTTGAGRAKAKGTKTMNVTV ASA NISADYNNSRLLNLSSFANLRGRVRL
Sbjct: 121 IYAGAIVGQSTTGAGRAKAKGTKTMNVTVQASANNISADYNNSRLLNLSSFANLRGRVRL 180

Query: 181 IHIFRRRASSEIRCSMILDLNTHQIQHNWVCE 213
           IHIFRRRASSEI CSMILDLNTHQIQHNWVCE
Sbjct: 181 IHIFRRRASSEISCSMILDLNTHQIQHNWVCE 212

[Close]

BLAST of CmoCh15G013220 vs. ExPASy TrEMBL
Match: A0A1S3ATY3 (late embryogenesis abundant protein At1g64065 OS=Cucumis melo OX=3656 GN=LOC103482793 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 2.6e-70
Identity = 150/214 (70.09%), Postives = 177/214 (82.71%), Query Frame = 0


Query: 1   MADDSQSFPIAHYQAHHKSDEEQHRHLTTFKALKKERSNKCFIYVFSAFVFLSVAVLIFA 60
           M +DSQSFP+AHYQAHHK+DEEQ   L TFK L KERSNKCFIY+FS FVFLSVA+LIFA
Sbjct: 1   MGEDSQSFPLAHYQAHHKTDEEQ--QLATFKTLHKERSNKCFIYIFSTFVFLSVALLIFA 60

Query: 61  LIVLRVNSPALHFSSLSVAKFSLSN-TNSSSP-SLNLTVTAQLAVDNSNFGPFNFDHASV 120
           LIVLRVNSP+++ S++S+ KFSLSN  NSSSP SL+L+ +A   VDNSNFGPFNFD+ +V
Sbjct: 61  LIVLRVNSPSINLSAVSIPKFSLSNANNSSSPNSLDLSFSAVFTVDNSNFGPFNFDNGTV 120

Query: 121 GFIYAGAIVGQSTTGAGRAKAKGTKTMNVTVHASAKNISADYNNSRLLNLSSFANLRGRV 180
           G +Y G I G+ +TG GRA+AKG+K MNVTV  SAKN+S    ++ +L+LSSF  LRGRV
Sbjct: 121 GLVYGGMIFGERSTGGGRAEAKGSKRMNVTVEGSAKNVS---GSNGILSLSSFVKLRGRV 180

Query: 181 RLIHIFRRRASSEIRCSMILDLNTHQIQHNWVCE 213
           RLIH+FRRR SSEI CSM LDLNTHQIQHNWVCE
Sbjct: 181 RLIHVFRRRVSSEISCSMNLDLNTHQIQHNWVCE 209

[Close]

BLAST of CmoCh15G013220 vs. ExPASy TrEMBL
Match: A0A5A7TL68 (Late embryogenesis abundant protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002140 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 3.4e-70
Identity = 150/214 (70.09%), Postives = 177/214 (82.71%), Query Frame = 0


Query: 1   MADDSQSFPIAHYQAHHKSDEEQHRHLTTFKALKKERSNKCFIYVFSAFVFLSVAVLIFA 60
           M +DSQSFP+AHYQAHHK+DEEQ   L TFK L KERSNKCFIY+FS FVFLSVA+LIFA
Sbjct: 1   MGEDSQSFPLAHYQAHHKTDEEQ--QLATFKTLHKERSNKCFIYIFSTFVFLSVALLIFA 60

Query: 61  LIVLRVNSPALHFSSLSVAKFSLSN-TNSSSP-SLNLTVTAQLAVDNSNFGPFNFDHASV 120
           LIVLRVNSP+++ S++S+ KFSLSN  NSSSP SL+L+ +A   VDNSNFGPFNFD+ +V
Sbjct: 61  LIVLRVNSPSINLSAVSIPKFSLSNANNSSSPNSLDLSFSAVFIVDNSNFGPFNFDNGTV 120

Query: 121 GFIYAGAIVGQSTTGAGRAKAKGTKTMNVTVHASAKNISADYNNSRLLNLSSFANLRGRV 180
           G +Y G I G+ +TG GRA+AKG+K MNVTV  SAKN+S    ++ +L+LSSF  LRGRV
Sbjct: 121 GLVYGGMIFGERSTGGGRAEAKGSKRMNVTVEGSAKNVS---GSNGILSLSSFVKLRGRV 180

Query: 181 RLIHIFRRRASSEIRCSMILDLNTHQIQHNWVCE 213
           RLIH+FRRR SSEI CSM LDLNTHQIQHNWVCE
Sbjct: 181 RLIHVFRRRVSSEISCSMNLDLNTHQIQHNWVCE 209

[Close]

BLAST of CmoCh15G013220 vs. ExPASy TrEMBL
Match: A0A0A0KQT7 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G152160 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.7e-69
Identity = 151/214 (70.56%), Postives = 173/214 (80.84%), Query Frame = 0


Query: 1   MADDSQSFPIAHYQAHHKSDEEQHRHLTTFKALKKERSNKCFIYVFSAFVFLSVAVLIFA 60
           M +DSQSFP+AHYQAHHK +EEQ   L TFK L+KERSNKCFIY+FS FVFLSVA+LIFA
Sbjct: 1   MGEDSQSFPLAHYQAHHKPNEEQ--QLATFKILRKERSNKCFIYIFSTFVFLSVALLIFA 60

Query: 61  LIVLRVNSPALHFSSLSVAKFSLS-NTNSSSP-SLNLTVTAQLAVDNSNFGPFNFDHASV 120
           LIVLRVNSP++  SS+S  + SLS NTNSSSP SLNL+  A+  VDNSNFGPFNFD+ +V
Sbjct: 61  LIVLRVNSPSISLSSISNPRVSLSNNTNSSSPNSLNLSFNAEFTVDNSNFGPFNFDNGTV 120

Query: 121 GFIYAGAIVGQSTTGAGRAKAKGTKTMNVTVHASAKNISADYNNSRLLNLSSFANLRGRV 180
           G +Y G I G+ +TG GRA AKG+K MNVTV  SAKN+S    ++ +LN SSF  LRGRV
Sbjct: 121 GLVYGGMIFGERSTGGGRAGAKGSKRMNVTVEGSAKNVS---GSNGILNFSSFVKLRGRV 180

Query: 181 RLIHIFRRRASSEIRCSMILDLNTHQIQHNWVCE 213
           RLIHIFRRR SSEI CSM LDLNTHQIQHNWVCE
Sbjct: 181 RLIHIFRRRVSSEISCSMNLDLNTHQIQHNWVCE 209

[Close]

BLAST of CmoCh15G013220 vs. ExPASy TrEMBL
Match: A0A6J1H2C0 (uncharacterized protein LOC111459739 OS=Cucurbita moschata OX=3662 GN=LOC111459739 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 1.0e-58
Identity = 127/212 (59.91%), Postives = 158/212 (74.53%), Query Frame = 0


Query: 1   MADDSQSFPIAHYQAHHKSDEEQHRHLTTFKALKKERSNKCFIYVFSAFVFLSVAVLIFA 60
           M + S SFP+ H QAHHK+              K E SNKCFIY+FS+FVFL VA+LIF+
Sbjct: 1   MGEHSHSFPLPHSQAHHKTP-------------KNEPSNKCFIYIFSSFVFLCVALLIFS 60

Query: 61  LIVLRVNSPALHFSSLSVAKFSLSNTNSSSPSLNLTVTAQLAVDNSNFGPFNFDHASVGF 120
           LIVLRVNSP +  SS+SV KFS+SNTNSSS SLNLT+ A+ ++DNSNFGPF FD+ +V F
Sbjct: 61  LIVLRVNSPTIDLSSISVRKFSISNTNSSSSSLNLTLIAEFSLDNSNFGPFIFDYVTVVF 120

Query: 121 IYAGAIVGQSTTGAGRAKAKGTKTMNVTVHASAKNISADYNNSRLLNLSSFANLRGRVRL 180
           +Y G IVG+ +TG GRA+AKGT  MNV+V AS +N+S+D N S +LN+SSFA   GR+ L
Sbjct: 121 MYGGVIVGERSTGGGRAEAKGTTRMNVSVEASVENVSSDLNGSGILNMSSFAKFGGRIHL 180

Query: 181 IHIFRRRASSEIRCSMILDLNTHQIQHNWVCE 213
           IH+ R+R  SEI CS+ LDLNTHQIQ  WVC+
Sbjct: 181 IHVLRKRIWSEISCSINLDLNTHQIQPRWVCD 199

[Close]

BLAST of CmoCh15G013220 vs. NCBI nr
Match: KAG6579535.1 (Late embryogenesis abundant protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 392.5 bits (1007), Expect = 2.3e-105
Identity = 207/212 (97.64%), Postives = 209/212 (98.58%), Query Frame = 0


Query: 1   MADDSQSFPIAHYQAHHKSDEEQHRHLTTFKALKKERSNKCFIYVFSAFVFLSVAVLIFA 60
           M DDSQSFPIAHYQAHHKSDEEQHRHLTTFKALKKERSNKCFIYVFSAFVFLSVAVLIFA
Sbjct: 1   MVDDSQSFPIAHYQAHHKSDEEQHRHLTTFKALKKERSNKCFIYVFSAFVFLSVAVLIFA 60

Query: 61  LIVLRVNSPALHFSSLSVAKFSLSNTNSSSPSLNLTVTAQLAVDNSNFGPFNFDHASVGF 120
           LIVLRVNSPALHFSSLSVAKFSLSNTNSSSPSLNLT+TAQLAVDNSNFGPFNFDHASVGF
Sbjct: 61  LIVLRVNSPALHFSSLSVAKFSLSNTNSSSPSLNLTLTAQLAVDNSNFGPFNFDHASVGF 120

Query: 121 IYAGAIVGQSTTGAGRAKAKGTKTMNVTVHASAKNISADYNNSRLLNLSSFANLRGRVRL 180
           IYAGAIVGQ+TTGAGR KAKGTKTMNVTVHASAKNISADYNNSRLLNLSSFANLRGRVRL
Sbjct: 121 IYAGAIVGQTTTGAGRTKAKGTKTMNVTVHASAKNISADYNNSRLLNLSSFANLRGRVRL 180

Query: 181 IHIFRRRASSEIRCSMILDLNTHQIQHNWVCE 213
           IHIFRRRASSEI CSMILDLNTHQIQHNWVCE
Sbjct: 181 IHIFRRRASSEIGCSMILDLNTHQIQHNWVCE 212

[Close]

BLAST of CmoCh15G013220 vs. NCBI nr
Match: XP_022969774.1 (uncharacterized protein LOC111468875 [Cucurbita maxima])

HSP 1 Score: 384.8 bits (987), Expect = 4.8e-103
Identity = 205/212 (96.70%), Postives = 208/212 (98.11%), Query Frame = 0


Query: 1   MADDSQSFPIAHYQAHHKSDEEQHRHLTTFKALKKERSNKCFIYVFSAFVFLSVAVLIFA 60
           MADDSQSFPIAHY+AHHKSDEEQ RHLTTFKAL+KERSNKCFIYVFSAFVFLSVAVLIFA
Sbjct: 1   MADDSQSFPIAHYKAHHKSDEEQRRHLTTFKALQKERSNKCFIYVFSAFVFLSVAVLIFA 60

Query: 61  LIVLRVNSPALHFSSLSVAKFSLSNTNSSSPSLNLTVTAQLAVDNSNFGPFNFDHASVGF 120
           LIVLRVNSPALHFSSLSVAKFSLSNTNSSSPSLNLTVTAQLAVDNSNFGPFNFD+ASVGF
Sbjct: 61  LIVLRVNSPALHFSSLSVAKFSLSNTNSSSPSLNLTVTAQLAVDNSNFGPFNFDYASVGF 120

Query: 121 IYAGAIVGQSTTGAGRAKAKGTKTMNVTVHASAKNISADYNNSRLLNLSSFANLRGRVRL 180
           IYAGAIVGQSTTGAGRAKAKGTKTMNVTV ASA NISADYNNSRLLNLSSFANLRGRVRL
Sbjct: 121 IYAGAIVGQSTTGAGRAKAKGTKTMNVTVQASANNISADYNNSRLLNLSSFANLRGRVRL 180

Query: 181 IHIFRRRASSEIRCSMILDLNTHQIQHNWVCE 213
           IHIFRRRASSEI CSMILDLNTHQIQHNWVCE
Sbjct: 181 IHIFRRRASSEISCSMILDLNTHQIQHNWVCE 212

[Close]

BLAST of CmoCh15G013220 vs. NCBI nr
Match: XP_038875090.1 (late embryogenesis abundant protein At1g64065 [Benincasa hispida])

HSP 1 Score: 306.6 bits (784), Expect = 1.7e-79
Identity = 160/212 (75.47%), Postives = 184/212 (86.79%), Query Frame = 0


Query: 1   MADDSQSFPIAHYQAHHKSDEEQHRHLTTFKALKKERSNKCFIYVFSAFVFLSVAVLIFA 60
           M +DSQSFP+AHYQAHHKSDEEQ   L TFK L+KERSNKCFIYVFS FVFLSVAVLIFA
Sbjct: 1   MVEDSQSFPLAHYQAHHKSDEEQ--QLATFKTLRKERSNKCFIYVFSTFVFLSVAVLIFA 60

Query: 61  LIVLRVNSPALHFSSLSVAKFSLSNTNSSSPSLNLTVTAQLAVDNSNFGPFNFDHASVGF 120
           LIVLRVNSP++  SS+S+ KFS++N NSSSPSLNLT+ A+  VDNSNFGPFNFD+ +VG 
Sbjct: 61  LIVLRVNSPSIQLSSVSIPKFSITNANSSSPSLNLTMIAEFTVDNSNFGPFNFDNGTVGL 120

Query: 121 IYAGAIVGQSTTGAGRAKAKGTKTMNVTVHASAKNISADYNNSRLLNLSSFANLRGRVRL 180
           +Y GAIVG+ +TGAGRA+AKG+K MNVT+ ASAKNIS+D NN  +LNL+SF  LRGRVRL
Sbjct: 121 MYGGAIVGEKSTGAGRAEAKGSKRMNVTMEASAKNISSDSNNLGILNLNSFVKLRGRVRL 180

Query: 181 IHIFRRRASSEIRCSMILDLNTHQIQHNWVCE 213
           IHIFRRR SSEI CSM LD+NTHQIQ+NWVCE
Sbjct: 181 IHIFRRRTSSEITCSMNLDMNTHQIQYNWVCE 210

[Close]

BLAST of CmoCh15G013220 vs. NCBI nr
Match: XP_008437349.1 (PREDICTED: late embryogenesis abundant protein At1g64065 [Cucumis melo])

HSP 1 Score: 275.0 bits (702), Expect = 5.4e-70
Identity = 150/214 (70.09%), Postives = 177/214 (82.71%), Query Frame = 0


Query: 1   MADDSQSFPIAHYQAHHKSDEEQHRHLTTFKALKKERSNKCFIYVFSAFVFLSVAVLIFA 60
           M +DSQSFP+AHYQAHHK+DEEQ   L TFK L KERSNKCFIY+FS FVFLSVA+LIFA
Sbjct: 1   MGEDSQSFPLAHYQAHHKTDEEQ--QLATFKTLHKERSNKCFIYIFSTFVFLSVALLIFA 60

Query: 61  LIVLRVNSPALHFSSLSVAKFSLSN-TNSSSP-SLNLTVTAQLAVDNSNFGPFNFDHASV 120
           LIVLRVNSP+++ S++S+ KFSLSN  NSSSP SL+L+ +A   VDNSNFGPFNFD+ +V
Sbjct: 61  LIVLRVNSPSINLSAVSIPKFSLSNANNSSSPNSLDLSFSAVFTVDNSNFGPFNFDNGTV 120

Query: 121 GFIYAGAIVGQSTTGAGRAKAKGTKTMNVTVHASAKNISADYNNSRLLNLSSFANLRGRV 180
           G +Y G I G+ +TG GRA+AKG+K MNVTV  SAKN+S    ++ +L+LSSF  LRGRV
Sbjct: 121 GLVYGGMIFGERSTGGGRAEAKGSKRMNVTVEGSAKNVS---GSNGILSLSSFVKLRGRV 180

Query: 181 RLIHIFRRRASSEIRCSMILDLNTHQIQHNWVCE 213
           RLIH+FRRR SSEI CSM LDLNTHQIQHNWVCE
Sbjct: 181 RLIHVFRRRVSSEISCSMNLDLNTHQIQHNWVCE 209

[Close]

BLAST of CmoCh15G013220 vs. NCBI nr
Match: KAA0042716.1 (late embryogenesis abundant protein [Cucumis melo var. makuwa])

HSP 1 Score: 274.6 bits (701), Expect = 7.0e-70
Identity = 150/214 (70.09%), Postives = 177/214 (82.71%), Query Frame = 0


Query: 1   MADDSQSFPIAHYQAHHKSDEEQHRHLTTFKALKKERSNKCFIYVFSAFVFLSVAVLIFA 60
           M +DSQSFP+AHYQAHHK+DEEQ   L TFK L KERSNKCFIY+FS FVFLSVA+LIFA
Sbjct: 1   MGEDSQSFPLAHYQAHHKTDEEQ--QLATFKTLHKERSNKCFIYIFSTFVFLSVALLIFA 60

Query: 61  LIVLRVNSPALHFSSLSVAKFSLSN-TNSSSP-SLNLTVTAQLAVDNSNFGPFNFDHASV 120
           LIVLRVNSP+++ S++S+ KFSLSN  NSSSP SL+L+ +A   VDNSNFGPFNFD+ +V
Sbjct: 61  LIVLRVNSPSINLSAVSIPKFSLSNANNSSSPNSLDLSFSAVFIVDNSNFGPFNFDNGTV 120

Query: 121 GFIYAGAIVGQSTTGAGRAKAKGTKTMNVTVHASAKNISADYNNSRLLNLSSFANLRGRV 180
           G +Y G I G+ +TG GRA+AKG+K MNVTV  SAKN+S    ++ +L+LSSF  LRGRV
Sbjct: 121 GLVYGGMIFGERSTGGGRAEAKGSKRMNVTVEGSAKNVS---GSNGILSLSSFVKLRGRV 180

Query: 181 RLIHIFRRRASSEIRCSMILDLNTHQIQHNWVCE 213
           RLIH+FRRR SSEI CSM LDLNTHQIQHNWVCE
Sbjct: 181 RLIHVFRRRVSSEISCSMNLDLNTHQIQHNWVCE 209

[Close]

BLAST of CmoCh15G013220 vs. TAIR 10
Match: AT1G64065.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 61.2 bits (147), Expect = 1.1e-09
Identity = 62/217 (28.57%), Postives = 107/217 (49.31%), Query Frame = 0


Query: 4   DSQSFPIAHYQAHHKSDEEQHRHLTTFKALKKERSNKCFIYVFSAFVFLSVAVLIFALIV 63
           D     +A  + + +SDEEQ      ++   +E   KC +Y  +  V +    LI + I 
Sbjct: 3   DEDRITLAPTEIYGRSDEEQSGP-RIWRRKTEEPPGKCLVYSLTIIVIIFALCLILSSIF 62

Query: 64  LRVNSPALHFSSLSVAKFSLSNTNSSSPSLNLTVTAQLAVDNSNFGPFNFDHASVGFIYA 123
           LR++ P +   S+S      S  NS++P  N T+ + +++ NSNFG F F+ +++  +YA
Sbjct: 63  LRISKPEIETRSISTRDLR-SGGNSTNPYFNATLVSDISIRNSNFGAFEFEDSTLRVVYA 122

Query: 124 G-AIVGQSTTGAGRAKA-KGTKTMNVTVHASA------KNISADYNNSRLLNLSSFANLR 183
              +VG++     R +A K  +   V V   +      K++  D      L L S A +R
Sbjct: 123 DHGVVGETKIEGRRVEAHKTVRITGVVVEIGSFRLLDTKDLDKDLRLG-FLELRSVAEVR 182

Query: 184 GRVRLIHIFRRRASSEIRCSMILDLNTHQIQHNWVCE 213
           GR++++   +R   S + C+M L+L    IQ N +CE
Sbjct: 183 GRIKVLG-RKRWKVSVMSCTMRLNLTGRFIQ-NLLCE 214

The following BLAST results are available for this feature:

BLAST of CmoCh15G013220 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6DST1	1.6e-08	28.57	Late embryogenesis abundant protein At1g64065 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of CmoCh15G013220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I3M2	2.3e-103	96.70	uncharacterized protein LOC111468875 OS=Cucurbita maxima OX=3661 GN=LOC111468875...	[more]
A0A1S3ATY3	2.6e-70	70.09	late embryogenesis abundant protein At1g64065 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A5A7TL68	3.4e-70	70.09	Late embryogenesis abundant protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A0A0KQT7	1.7e-69	70.56	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G152160 PE=4 ...	[more]
A0A6J1H2C0	1.0e-58	59.91	uncharacterized protein LOC111459739 OS=Cucurbita moschata OX=3662 GN=LOC1114597...	[more]

BLAST of CmoCh15G013220 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6579535.1	2.3e-105	97.64	Late embryogenesis abundant protein, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_022969774.1	4.8e-103	96.70	uncharacterized protein LOC111468875 [Cucurbita maxima]	[more]
XP_038875090.1	1.7e-79	75.47	late embryogenesis abundant protein At1g64065 [Benincasa hispida]	[more]
XP_008437349.1	5.4e-70	70.09	PREDICTED: late embryogenesis abundant protein At1g64065 [Cucumis melo]	[more]
KAA0042716.1	7.0e-70	70.09	late embryogenesis abundant protein [Cucumis melo var. makuwa]	[more]

BLAST of CmoCh15G013220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64065.1	1.1e-09	28.57	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 101..194 e-value: 3.2E-8 score: 34.1
None	No IPR available	GENE3D	2.60.40.1820		coord: 59..183 e-value: 1.0E-5 score: 27.4
None	No IPR available	PANTHER	PTHR31852	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 8..212
None	No IPR available	PANTHER	PTHR31852:SF192	LATE EMBRYOGENESIS ABUNDANT PROTEIN	coord: 8..212
None	No IPR available	SUPERFAMILY	117070	LEA14-like	coord: 51..156

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh15G013220.1	CmoCh15G013220.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane