CmoCh15G012850 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh15G012850
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	ribosomal L1 domain-containing protein 1-like
Location	Cmo_Chr15: 8799055 .. 8800395 (-)
RNA-Seq Expression	CmoCh15G012850
Synteny	CmoCh15G012850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCGTCGGATTCTGTTGCCCTTTCTTCCAGAGTTCGTCGGGAAACGGCGGAGAAAGCCGTTGAGTCTCTTCTTCAATGGCGAAATTCGAAACGAGAGAAACCTCAACTCTTCGACCAGGAAGATTTTTTGTACCTTGTTGTAGCCCTAAAGAAGATACCTCCCAAAGGTCGCACAAACCCTTACAAAATCCCTCTCCCGCATTCCTTCCGCTCCGATTCTTCTGAAATCTGCCTCATAATTGACGACAGAAGCAGGTCCAATCTTACCAAAGATGAGGCCAGGAAGAAAATTCAGTCGGAGAATATCCCAATCTCGAAGGTCATCAAGTTGTCGAAGCTTAAATCCGACTACCGTCCCTTTGAAGCTAAACGAAAGCTCTGTGATTCGTACGATATGTTTTTCGCCGATGATCGGGTTATTCCGCTGCTGCCGAGTCTGTTGGGGAAGCACTTCTACAAGAAGAAGAAGATTCCGGTGCCGTTGAATTTGAGGCATAAGAATTGGAAAGAACAGATCGAGAGGAGCTGTTCATCGGCTTTGTTGTATTTGAGGACAGGTACTTGTAGTGTAGTGAAAGTAGCAAAGACTTCGATGGAAGTTGAAGAAATAGTGAGTAATGTGATTGCGGCCATTGATGGGATTGCCGAGATTGTGCCTAAAAAGTGGAGTAATGTGCGGTCATTTCATTTGAAGGTCCTGGAATCGATTGCATTGCCAATTTACCAGACAGTGCCGGAGTTGAAGTTGAAGATTGATGCTGCCGTGAAGGGGGAAGAAAAGGGAACAGAAAAAGAAGATGAAGCAGGAAAGAGTCCTACTCCTGTGAAGGTTAGCAACAAAAAAGAGAAGAAATCGAGCATGAAAAAGGGGAGGATACATGAAGTTCGCTATATGGACAGTAATGGCGGAGAGTTGTCTGATGAAGATGACCTGAACGGCGATCTTGATGAAGACATGGATAATGCTGAGGTTAGTGAGAATCTCAAAAAGGGTAGTGATGAATTGAAGCGTAAGACACGGAGTAGAGTGAACAAAGGAAAAGAAGAGCTCCAAAATGACTTGAATTCTGAGAAAACATTGAAGAAATCAACTGTTGTGAAGAAAGATGACAGTGTCAAACAAAAAAAGGATAAGATATCTGCAAAGAAGGATGATACTGTCAAACAAAAAAAAGATAAGGTAGCTGCAAAGAAGAAGGATGGAGGTAATATCAAGCAAAAGGAAGTTGAAGATGAAGGGTCTGCTGGGAAGAAGGTAAAAAAGAGTGGGGTTTCGAAGTCGAAAACTGCTGATGGAACAAAGGTGAAGACAAAGAAATTGAAAGCGATGAAGTGA

mRNA sequence

ATGGCGTCGTCGGATTCTGTTGCCCTTTCTTCCAGAGTTCGTCGGGAAACGGCGGAGAAAGCCGTTGAGTCTCTTCTTCAATGGCGAAATTCGAAACGAGAGAAACCTCAACTCTTCGACCAGGAAGATTTTTTGTACCTTGTTGTAGCCCTAAAGAAGATACCTCCCAAAGGTCGCACAAACCCTTACAAAATCCCTCTCCCGCATTCCTTCCGCTCCGATTCTTCTGAAATCTGCCTCATAATTGACGACAGAAGCAGGTCCAATCTTACCAAAGATGAGGCCAGGAAGAAAATTCAGTCGGAGAATATCCCAATCTCGAAGGTCATCAAGTTGTCGAAGCTTAAATCCGACTACCGTCCCTTTGAAGCTAAACGAAAGCTCTGTGATTCGTACGATATGTTTTTCGCCGATGATCGGGTTATTCCGCTGCTGCCGAGTCTGTTGGGGAAGCACTTCTACAAGAAGAAGAAGATTCCGGTGCCGTTGAATTTGAGGCATAAGAATTGGAAAGAACAGATCGAGAGGAGCTGTTCATCGGCTTTGTTGTATTTGAGGACAGGTACTTGTAGTGTAGTGAAAGTAGCAAAGACTTCGATGGAAGTTGAAGAAATAGTGAGTAATGTGATTGCGGCCATTGATGGGATTGCCGAGATTGTGCCTAAAAAGTGGAGTAATGTGCGGTCATTTCATTTGAAGGTCCTGGAATCGATTGCATTGCCAATTTACCAGACAGTGCCGGAGTTGAAGTTGAAGATTGATGCTGCCGTGAAGGGGGAAGAAAAGGGAACAGAAAAAGAAGATGAAGCAGGAAAGAGTCCTACTCCTGTGAAGGTTAGCAACAAAAAAGAGAAGAAATCGAGCATGAAAAAGGGGAGGATACATGAAGTTCGCTATATGGACAGTAATGGCGGAGAGTTGTCTGATGAAGATGACCTGAACGGCGATCTTGATGAAGACATGGATAATGCTGAGGTTAGTGAGAATCTCAAAAAGGGTAGTGATGAATTGAAGCGTAAGACACGGAGTAGAGTGAACAAAGGAAAAGAAGAGCTCCAAAATGACTTGAATTCTGAGAAAACATTGAAGAAATCAACTGTTGTGAAGAAAGATGACAGTGTCAAACAAAAAAAGGATAAGATATCTGCAAAGAAGGATGATACTGTCAAACAAAAAAAAGATAAGGTAGCTGCAAAGAAGAAGGATGGAGGTAATATCAAGCAAAAGGAAGTTGAAGATGAAGGGTCTGCTGGGAAGAAGGTAAAAAAGAGTGGGGTTTCGAAGTCGAAAACTGCTGATGGAACAAAGGTGAAGACAAAGAAATTGAAAGCGATGAAGTGA

Coding sequence (CDS)

ATGGCGTCGTCGGATTCTGTTGCCCTTTCTTCCAGAGTTCGTCGGGAAACGGCGGAGAAAGCCGTTGAGTCTCTTCTTCAATGGCGAAATTCGAAACGAGAGAAACCTCAACTCTTCGACCAGGAAGATTTTTTGTACCTTGTTGTAGCCCTAAAGAAGATACCTCCCAAAGGTCGCACAAACCCTTACAAAATCCCTCTCCCGCATTCCTTCCGCTCCGATTCTTCTGAAATCTGCCTCATAATTGACGACAGAAGCAGGTCCAATCTTACCAAAGATGAGGCCAGGAAGAAAATTCAGTCGGAGAATATCCCAATCTCGAAGGTCATCAAGTTGTCGAAGCTTAAATCCGACTACCGTCCCTTTGAAGCTAAACGAAAGCTCTGTGATTCGTACGATATGTTTTTCGCCGATGATCGGGTTATTCCGCTGCTGCCGAGTCTGTTGGGGAAGCACTTCTACAAGAAGAAGAAGATTCCGGTGCCGTTGAATTTGAGGCATAAGAATTGGAAAGAACAGATCGAGAGGAGCTGTTCATCGGCTTTGTTGTATTTGAGGACAGGTACTTGTAGTGTAGTGAAAGTAGCAAAGACTTCGATGGAAGTTGAAGAAATAGTGAGTAATGTGATTGCGGCCATTGATGGGATTGCCGAGATTGTGCCTAAAAAGTGGAGTAATGTGCGGTCATTTCATTTGAAGGTCCTGGAATCGATTGCATTGCCAATTTACCAGACAGTGCCGGAGTTGAAGTTGAAGATTGATGCTGCCGTGAAGGGGGAAGAAAAGGGAACAGAAAAAGAAGATGAAGCAGGAAAGAGTCCTACTCCTGTGAAGGTTAGCAACAAAAAAGAGAAGAAATCGAGCATGAAAAAGGGGAGGATACATGAAGTTCGCTATATGGACAGTAATGGCGGAGAGTTGTCTGATGAAGATGACCTGAACGGCGATCTTGATGAAGACATGGATAATGCTGAGGTTAGTGAGAATCTCAAAAAGGGTAGTGATGAATTGAAGCGTAAGACACGGAGTAGAGTGAACAAAGGAAAAGAAGAGCTCCAAAATGACTTGAATTCTGAGAAAACATTGAAGAAATCAACTGTTGTGAAGAAAGATGACAGTGTCAAACAAAAAAAGGATAAGATATCTGCAAAGAAGGATGATACTGTCAAACAAAAAAAAGATAAGGTAGCTGCAAAGAAGAAGGATGGAGGTAATATCAAGCAAAAGGAAGTTGAAGATGAAGGGTCTGCTGGGAAGAAGGTAAAAAAGAGTGGGGTTTCGAAGTCGAAAACTGCTGATGGAACAAAGGTGAAGACAAAGAAATTGAAAGCGATGAAGTGA

Protein sequence

MASSDSVALSSRVRRETAEKAVESLLQWRNSKREKPQLFDQEDFLYLVVALKKIPPKGRTNPYKIPLPHSFRSDSSEICLIIDDRSRSNLTKDEARKKIQSENIPISKVIKLSKLKSDYRPFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIERSCSSALLYLRTGTCSVVKVAKTSMEVEEIVSNVIAAIDGIAEIVPKKWSNVRSFHLKVLESIALPIYQTVPELKLKIDAAVKGEEKGTEKEDEAGKSPTPVKVSNKKEKKSSMKKGRIHEVRYMDSNGGELSDEDDLNGDLDEDMDNAEVSENLKKGSDELKRKTRSRVNKGKEELQNDLNSEKTLKKSTVVKKDDSVKQKKDKISAKKDDTVKQKKDKVAAKKKDGGNIKQKEVEDEGSAGKKVKKSGVSKSKTADGTKVKTKKLKAMK

Homology

[Close]

BLAST of CmoCh15G012850 vs. ExPASy Swiss-Prot
Match: A4FV97 (Ribosomal L1 domain-containing protein 1 OS=Bos taurus OX=9913 GN=RSL1D1 PE=2 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 5.7e-32
Identity = 94/286 (32.87%), Postives = 152/286 (53.15%), Query Frame = 0


Query: 16  ETAEKAVESLL-QWRNSKREKPQLFDQEDFLYLVVALKKIPPKGRTNPYKIPLPHSFRSD 75
           E  +KAVE+LL   R+ K     L ++ +  +L+V L KIP K      ++ LPH  RSD
Sbjct: 32  EQVKKAVEALLAHSRSRKNANGLLLNENENFFLMVVLWKIPSKELR--VRLSLPHGIRSD 91

Query: 76  SSEICLIIDDRSR--SNLTKDEARKKIQSENI-PISKVIKLSKLKSDYRPFEAKRKLCDS 135
            +++CL   D     S  T+   +K + +  I  IS++I    LK +Y+ +EAK +L  S
Sbjct: 92  LADVCLFTKDEPNLSSEQTERYYKKLLNNHGIKTISQIIPFRTLKKEYKAYEAKLRLLGS 151

Query: 136 YDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIERSCSSALLYL-RTGTC 195
           +D F  D R+  LLPS LG+HFY +KK+PV +NL+ K    +I       +L + ++G+C
Sbjct: 152 FDFFITDARIRRLLPSHLGRHFYNRKKVPVSVNLQSKTLSREINDCIGGTVLNISKSGSC 211

Query: 196 SVVKVAKTSMEVEEIVSNVIAAIDGIAEIVPKKWSNVRSFHLKVLESIALPIYQTVPELK 255
           S +++  T M ++ IV NV+A    +++ +P+KW +V+   +K   S++LP++ +     
Sbjct: 212 STIRIGHTGMPIQHIVENVVAVAKSLSQKLPEKWESVKLLFVKTERSVSLPVFSSF---- 271

Query: 256 LKIDAAVKGEEKGTEKEDEAGKSPTPVKVSNKKEKKSSMKKGRIHE 297
                + +GE KG    D         KVS K  KK+     R  E
Sbjct: 272 ----VSSQGEAKGLRTRD------LLKKVSKKSRKKTERALKRQQE 301

[Close]

BLAST of CmoCh15G012850 vs. ExPASy Swiss-Prot
Match: O76021 (Ribosomal L1 domain-containing protein 1 OS=Homo sapiens OX=9606 GN=RSL1D1 PE=1 SV=3)

HSP 1 Score: 129.0 bits (323), Expect = 1.3e-28
Identity = 123/422 (29.15%), Postives = 205/422 (48.58%), Query Frame = 0


Query: 15  RETAEKAVESLL-QWRNSKREKPQLFDQEDFLYLVVALKKIPPKGRTNPYKIPLPHSFRS 74
           +E   KAV++LL   ++ K     L ++ + L+L+V L KIP K      ++ LPHS RS
Sbjct: 33  KEQVRKAVDALLTHCKSRKNNYGLLLNENESLFLMVVLWKIPSKELR--VRLTLPHSIRS 92

Query: 75  DSSEICLIIDDRSRSNLTKDEA--RKKIQSENI-PISKVIKLSKLKSDYRPFEAKRKLCD 134
           DS +ICL   D   S   K E   RK +    I  +S++I L  LK +Y+ +EAK +L  
Sbjct: 93  DSEDICLFTKDEPNSTPEKTEQFYRKLLNKHGIKTVSQIISLQTLKKEYKSYEAKLRLLS 152

Query: 135 SYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIERSCSSALLYL-RTGT 194
           S+D F  D R+  LLPSL+G+HFY++KK+PV +NL  KN   +I       +L + ++G+
Sbjct: 153 SFDFFLTDARIRRLLPSLIGRHFYQRKKVPVSVNLLSKNLSREINDCIGGTVLNISKSGS 212

Query: 195 CSVVKVAKTSMEVEEIVSNVIAAIDGIAEIVPKKWSNVRSFHLKVLESIALPIYQTVPEL 254
           CS +++    M++E I+ N++A   G++E +P+KW +V+   +K  +S ALPI+ +    
Sbjct: 213 CSAIRIGHVGMQIEHIIENIVAVTKGLSEKLPEKWESVKLLFVKTEKSAALPIFSSFVS- 272

Query: 255 KLKIDAAVKGEEKGTEKEDEAGKSPTPVKVSNKKEKKSSMKKGRIHEVRYMDSNGGELSD 314
               D A K      +K++   K         K+ KK   +  +   V   D    E  D
Sbjct: 273 --NWDEATKRSLLNKKKKEARRKRRERNFEKQKERKKKRQQARKTASVLSKDDVAPESGD 332

Query: 315 EDDLNGDLDEDMDNAEVSENLKKGSDELKRKTRSR------VNKGKEELQN---DLNSEK 374
                 +  ++       +   +G  ++K    S       V  GK+   N   ++    
Sbjct: 333 TTVKKPESKKEQTPEHGKKKRGRGKAQVKATNESEDEIPQLVPIGKKTPANEKVEIQKHA 392

Query: 375 TLKKSTVVKKDDSVKQKKDKISAKKDDTVKQKKDKVAAKKKD-GGNIKQKEVEDEG-SAG 421
           T KKS     + S  + K + +    +T K  + +   K  +    IK++ V+++  S G
Sbjct: 393 TGKKSPAKSPNPSTPRGKKRKALPASETPKAAESETPGKSPEKKPKIKEEAVKEKSPSLG 449

[Close]

BLAST of CmoCh15G012850 vs. ExPASy Swiss-Prot
Match: Q5RCE6 (Ribosomal L1 domain-containing protein 1 OS=Pongo abelii OX=9601 GN=RSL1D1 PE=2 SV=2)

HSP 1 Score: 129.0 bits (323), Expect = 1.3e-28
Identity = 123/422 (29.15%), Postives = 205/422 (48.58%), Query Frame = 0


Query: 15  RETAEKAVESLL-QWRNSKREKPQLFDQEDFLYLVVALKKIPPKGRTNPYKIPLPHSFRS 74
           +E   KAV++LL   ++ K     L ++ + L+L+V L KIP K      ++ LPHS RS
Sbjct: 33  KEQVRKAVDALLTHCKSRKNNYGLLLNENESLFLMVVLWKIPSKELR--VRLTLPHSIRS 92

Query: 75  DSSEICLIIDDRSRSNLTKDEA--RKKIQSENI-PISKVIKLSKLKSDYRPFEAKRKLCD 134
           DS +ICL   D   S   K E   RK +    I  +S++I L  LK +Y+ +EAK +L  
Sbjct: 93  DSEDICLFTKDEPNSTPEKTEQFYRKLLNKHGIKTVSQIISLQTLKKEYKSYEAKLRLLS 152

Query: 135 SYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIERSCSSALLYL-RTGT 194
           S+D F  D R+  LLPSL+G+HFY++KK+PV +NL  KN   +I       +L + ++G+
Sbjct: 153 SFDFFLTDARIRRLLPSLIGRHFYQRKKVPVSVNLLSKNLSREINDCIGGTVLNISKSGS 212

Query: 195 CSVVKVAKTSMEVEEIVSNVIAAIDGIAEIVPKKWSNVRSFHLKVLESIALPIYQTVPEL 254
           CS +++    M++E I+ N++A   G++E +P+KW +V+   +K  +S ALPI+ +    
Sbjct: 213 CSAIRIGHVGMQIEHIIENIVAVTKGLSEKLPEKWESVKLLFVKTEKSAALPIFSSFVS- 272

Query: 255 KLKIDAAVKGEEKGTEKEDEAGKSPTPVKVSNKKEKKSSMKKGRIHEVRYMDSNGGELSD 314
               D A K      +K++   K         K+ KK   +  +   V   D    E  D
Sbjct: 273 --NWDEATKRSLLNKKKKEARRKRRERNFEKQKERKKKRQQARKTASVLSKDDVAPESGD 332

Query: 315 EDDLNGDLDEDMDNAEVSENLKKGSDELKRKTRSR------VNKGKEELQN---DLNSEK 374
                 +  ++       +   +G  ++K    S       V  GK+   N   ++    
Sbjct: 333 TTVKKPESKKEQTPEHGKKKRGRGKAQVKATNESEDEIPQLVPIGKKTPANEKVEIQKHA 392

Query: 375 TLKKSTVVKKDDSVKQKKDKISAKKDDTVKQKKDKVAAKKKD-GGNIKQKEVEDEG-SAG 421
           T KKS     + S  + K + +    +T K  + +   K  +    IK++ V+++  S G
Sbjct: 393 TGKKSPAKSPNPSTPRGKKRKALPASETPKAAESETPGKSPEKKPKIKEEAVKEKSPSLG 449

[Close]

BLAST of CmoCh15G012850 vs. ExPASy Swiss-Prot
Match: Q8BVY0 (Ribosomal L1 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Rsl1d1 PE=1 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 3.3e-24
Identity = 121/436 (27.75%), Postives = 213/436 (48.85%), Query Frame = 0


Query: 15  RETAEKAVESLLQWRNSKREKPQ-LFDQEDFLYLVVALKKIPPKGRTNPYKIPLPHSFRS 74
           RE   KAVE +     SK+   + L    + L+L+V L KIP K      K+PLPHS  S
Sbjct: 33  REQIRKAVEVISNRSKSKKNNNELLLSGSENLFLMVILWKIPEKELR--VKVPLPHSILS 92

Query: 75  DSSEICLIIDDRSRSNLTKDEARKKIQSEN--IPISKVIKLSKLKSDYRPFEAKRKLCDS 134
           +SS++CL   D   S    +   KK+  ++    IS++I    LK++Y+ +EAK +L  S
Sbjct: 93  ESSDVCLFTKDEFDSPEQTEGFYKKLLKKHGVNTISQIIPFKTLKTEYKAYEAKLRLLGS 152

Query: 135 YDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIERSCSSALLYL-RTGTC 194
           +++F  D R+   LPS +G+HFY++KK+PV +NL  KN  ++I R  +  +L + + G+C
Sbjct: 153 FEVFITDARIRRHLPSHIGRHFYQRKKVPVSVNLLAKNLSKEINRCITGTVLNISKRGSC 212

Query: 195 SVVKVAKTSMEVEEIVSNVIAAIDGIAEIVPKKWSNVRSFHLKVLESIALPIYQTV---- 254
           S +++  T ME E IV N++A  + ++E +P+KW +V+   LK  +S++LPI+ +     
Sbjct: 213 STIRIGHTGMETEHIVDNILAVSEMLSEKLPEKWQSVKLLFLKTEKSVSLPIFSSFVTSQ 272

Query: 255 PELKLKIDAAVKGEEKGTEKEDEAGKSPTPVKVSNKKEKKSSMKKGRIHEVRYMDSNGGE 314
            E  + + +  K E K  ++E+             K +K+S M + +  +   + +  G 
Sbjct: 273 DENAVSLRSLRKQELKKRKRENA------------KLKKESKMLRKKSKKATSLLTQSGL 332

Query: 315 LSDEDDLNGDLDEDMDNAEVSENLKKGSDELKRKTRSRVNKGKEELQNDLNSEKTLKKST 374
            S     +    +   N   +   +K ++E +      V  G+   + ++  ++ +   T
Sbjct: 333 ASSAPAKSPGAQKKKTNK--AHKKQKVTEECEEAIPQLVPIGETPDKENVKMQENITGKT 392

Query: 375 VVKKDDSVKQKKDKISAKKDDTVKQKKDKVAAKKKDGGNIKQKEVED----EGSAGKKVK 434
              K D    K      KK   +   +   A+     G  ++K+V++    E S+    +
Sbjct: 393 PKSKSDPSTPK-----GKKRKALLATETPEASAPGTSGKKQKKDVQEFRKPEASSFSTPR 447

Query: 435 KSGVSKSKTADGTKVK 439
           KSG   S T    K K
Sbjct: 453 KSGKKASNTPRDKKTK 447

[Close]

BLAST of CmoCh15G012850 vs. ExPASy Swiss-Prot
Match: Q9UT32 (Putative ribosome biogenesis protein C8F11.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC8F11.04 PE=3 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 3.1e-22
Identity = 127/390 (32.56%), Postives = 196/390 (50.26%), Query Frame = 0


Query: 10  SSRVRRETAEKAVESLLQWRNSKREKPQLFDQE----DFLYLVVA-LKKIPPKGRTNPYK 69
           S+ +  E+  K+ E++    +S+ +K  L + E    + ++L +A LK I    +  PYK
Sbjct: 18  SALLEYESKRKSSENI----DSESKKTNLLEDEQDDIEPVWLQLATLKFIGNNRKLIPYK 77

Query: 70  IPLPHSFRSDSSEICLIIDDRSR--SNLTKDEARKKIQSENIPISKVIKLSKLKSDYRPF 129
           I + +     SSE CLI+ D  R   +L  +    K+      +++VI LSKLK+ +  +
Sbjct: 78  IAIKNPVIPSSSEACLIVKDPQRVYKDLVNEAGLSKV------VTRVIGLSKLKAKWNSY 137

Query: 130 EAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIERSCSSA- 189
           E KR+L D +D+F ADDRVIP+LP +LGK FY+K K+PVP+ +  K   EQ++R   SA 
Sbjct: 138 EQKRQLRDQFDIFLADDRVIPMLPRILGKTFYQKSKVPVPVKI-SKGTAEQLKREVVSAY 197

Query: 190 -LLYLRTGTCS--VVK---VAKTSMEVEEIVSNVIAAIDGIAEIVPKKWSNVRSFHLKVL 249
              Y  +  CS  ++K   V+ TS E+ E V +++  +     IVP     + S HLK  
Sbjct: 198 GATYFNSAPCSSFMIKCGHVSNTSTELAENVESILQFVS--KHIVPDGAKGIASIHLKTS 257

Query: 250 ESIALPIYQTVPELKLKIDAAVKGEEKGTEKEDEAGKSPTPVKVSNKKEKKSSMKKGRIH 309
           +SIA+P++   P LK  I ++ K   K T       KS      S KK+KK  + K    
Sbjct: 258 QSIAIPLWNN-PNLKELIASSRKVVTKETASSKR--KSDEESLPSQKKQKKVEVAK---- 317

Query: 310 EVRYMDSNGGELSDEDDLNGDLDEDMDNAEVSENLKKGSDELKRKT--RSRVNKGKEELQ 369
                DS    +SD+  +            V E  KK S +   KT  R   +KGK+   
Sbjct: 318 --ESKDSKQQNVSDKKQVT-----------VKEVPKKLSVKNAAKTTNRDEDSKGKKAKA 371

Query: 370 NDLNSEKTLKK--STVVKKDDSVKQKKDKI 382
           +   S+ +LK   +T +KK   VK  K+K+
Sbjct: 378 SPKVSQSSLKANGTTAIKK---VKAGKNKV 371

[Close]

BLAST of CmoCh15G012850 vs. ExPASy TrEMBL
Match: A0A6J1ESQ8 (ribosomal L1 domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111435655 PE=4 SV=1)

HSP 1 Score: 815.1 bits (2104), Expect = 1.5e-232
Identity = 446/446 (100.00%), Postives = 446/446 (100.00%), Query Frame = 0


Query: 1   MASSDSVALSSRVRRETAEKAVESLLQWRNSKREKPQLFDQEDFLYLVVALKKIPPKGRT 60
           MASSDSVALSSRVRRETAEKAVESLLQWRNSKREKPQLFDQEDFLYLVVALKKIPPKGRT
Sbjct: 1   MASSDSVALSSRVRRETAEKAVESLLQWRNSKREKPQLFDQEDFLYLVVALKKIPPKGRT 60

Query: 61  NPYKIPLPHSFRSDSSEICLIIDDRSRSNLTKDEARKKIQSENIPISKVIKLSKLKSDYR 120
           NPYKIPLPHSFRSDSSEICLIIDDRSRSNLTKDEARKKIQSENIPISKVIKLSKLKSDYR
Sbjct: 61  NPYKIPLPHSFRSDSSEICLIIDDRSRSNLTKDEARKKIQSENIPISKVIKLSKLKSDYR 120

Query: 121 PFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIERSCSS 180
           PFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIERSCSS
Sbjct: 121 PFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIERSCSS 180

Query: 181 ALLYLRTGTCSVVKVAKTSMEVEEIVSNVIAAIDGIAEIVPKKWSNVRSFHLKVLESIAL 240
           ALLYLRTGTCSVVKVAKTSMEVEEIVSNVIAAIDGIAEIVPKKWSNVRSFHLKVLESIAL
Sbjct: 181 ALLYLRTGTCSVVKVAKTSMEVEEIVSNVIAAIDGIAEIVPKKWSNVRSFHLKVLESIAL 240

Query: 241 PIYQTVPELKLKIDAAVKGEEKGTEKEDEAGKSPTPVKVSNKKEKKSSMKKGRIHEVRYM 300
           PIYQTVPELKLKIDAAVKGEEKGTEKEDEAGKSPTPVKVSNKKEKKSSMKKGRIHEVRYM
Sbjct: 241 PIYQTVPELKLKIDAAVKGEEKGTEKEDEAGKSPTPVKVSNKKEKKSSMKKGRIHEVRYM 300

Query: 301 DSNGGELSDEDDLNGDLDEDMDNAEVSENLKKGSDELKRKTRSRVNKGKEELQNDLNSEK 360
           DSNGGELSDEDDLNGDLDEDMDNAEVSENLKKGSDELKRKTRSRVNKGKEELQNDLNSEK
Sbjct: 301 DSNGGELSDEDDLNGDLDEDMDNAEVSENLKKGSDELKRKTRSRVNKGKEELQNDLNSEK 360

Query: 361 TLKKSTVVKKDDSVKQKKDKISAKKDDTVKQKKDKVAAKKKDGGNIKQKEVEDEGSAGKK 420
           TLKKSTVVKKDDSVKQKKDKISAKKDDTVKQKKDKVAAKKKDGGNIKQKEVEDEGSAGKK
Sbjct: 361 TLKKSTVVKKDDSVKQKKDKISAKKDDTVKQKKDKVAAKKKDGGNIKQKEVEDEGSAGKK 420

Query: 421 VKKSGVSKSKTADGTKVKTKKLKAMK 447
           VKKSGVSKSKTADGTKVKTKKLKAMK
Sbjct: 421 VKKSGVSKSKTADGTKVKTKKLKAMK 446

[Close]

BLAST of CmoCh15G012850 vs. ExPASy TrEMBL
Match: A0A6J1HY99 (ribosomal L1 domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111469121 PE=4 SV=1)

HSP 1 Score: 793.5 bits (2048), Expect = 4.6e-226
Identity = 435/446 (97.53%), Postives = 439/446 (98.43%), Query Frame = 0


Query: 1   MASSDSVALSSRVRRETAEKAVESLLQWRNSKREKPQLFDQEDFLYLVVALKKIPPKGRT 60
           MASSDSVALSSRVRRETAEKAVESLLQWRNSKREKPQLFD EDFLYLVVALKKIPPKGRT
Sbjct: 1   MASSDSVALSSRVRRETAEKAVESLLQWRNSKREKPQLFDLEDFLYLVVALKKIPPKGRT 60

Query: 61  NPYKIPLPHSFRSDSSEICLIIDDRSRSNLTKDEARKKIQSENIPISKVIKLSKLKSDYR 120
           NPYKIPLPHS RSDSSEICLIIDDRSRSNLTKD+ARKKIQSENIPISKVIKLSKLKSDYR
Sbjct: 61  NPYKIPLPHSLRSDSSEICLIIDDRSRSNLTKDDARKKIQSENIPISKVIKLSKLKSDYR 120

Query: 121 PFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIERSCSS 180
           PFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIERSCSS
Sbjct: 121 PFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIERSCSS 180

Query: 181 ALLYLRTGTCSVVKVAKTSMEVEEIVSNVIAAIDGIAEIVPKKWSNVRSFHLKVLESIAL 240
           ALLYLRTGTCSVVKVAKTSMEVEEIVSNVIAAIDGIAEIVPKKWSNVRSFHLKVLESIAL
Sbjct: 181 ALLYLRTGTCSVVKVAKTSMEVEEIVSNVIAAIDGIAEIVPKKWSNVRSFHLKVLESIAL 240

Query: 241 PIYQTVPELKLKIDAAVKGEEKGTEKEDEAGKSPTPVKVSNKKEKKSSMKKGRIHEVRYM 300
           PIYQTVPELKLKIDAAVKG+EKGTEKEDEAGKSPTPVKVSNKKEKKS MKKGRIHEVRYM
Sbjct: 241 PIYQTVPELKLKIDAAVKGDEKGTEKEDEAGKSPTPVKVSNKKEKKSRMKKGRIHEVRYM 300

Query: 301 DSNGGELSDEDDLNGDLDEDMDNAEVSENLKKGSDELKRKTRSRVNKGKEELQNDLNSEK 360
           DSNGGELSDEDDLNGDLDEDMDNAEVSENLKKGSDELKRKTRSRVNKGKEELQNDL+SEK
Sbjct: 301 DSNGGELSDEDDLNGDLDEDMDNAEVSENLKKGSDELKRKTRSRVNKGKEELQNDLSSEK 360

Query: 361 TLKKSTVVKKDDSVKQKKDKISAKKDDTVKQKKDKVAAKKKDGGNIKQKEVEDEGSAGKK 420
           TLKKST VKKDDSVKQKKDKIS KKDD+VKQKKDKVAAKKKDGGNIKQKE EDEGSAGKK
Sbjct: 361 TLKKSTGVKKDDSVKQKKDKISTKKDDSVKQKKDKVAAKKKDGGNIKQKEDEDEGSAGKK 420

Query: 421 VKKSGVSKSKTADGTKVKTKKLKAMK 447
           VKKSGVSKSK ADGTKVKTKKLKAMK
Sbjct: 421 VKKSGVSKSKAADGTKVKTKKLKAMK 446

[Close]

BLAST of CmoCh15G012850 vs. ExPASy TrEMBL
Match: A0A6J1E0M1 (ribosomal L1 domain-containing protein 1-like OS=Momordica charantia OX=3673 GN=LOC111026071 PE=4 SV=1)

HSP 1 Score: 609.4 bits (1570), Expect = 1.2e-170
Identity = 357/447 (79.87%), Postives = 392/447 (87.70%), Query Frame = 0


Query: 1   MASSDSVAL--SSRVRRETAEKAVESLLQWRNSKREKPQLFDQEDFLYLVVALKKIPPKG 60
           MAS  SV +  SSRV ++TAEKAVESLLQWRNSKREKPQLFDQEDFLYLVV L+KIPPKG
Sbjct: 1   MASPGSVCVPPSSRVNQQTAEKAVESLLQWRNSKREKPQLFDQEDFLYLVVTLRKIPPKG 60

Query: 61  RTNPYKIPLPHSFRSDSSEICLIIDDRSRSNLTKDEARKKIQSENIPISKVIKLSKLKSD 120
           RTNPYKIPLPHS  S+SSE+CLIIDDR++SNLTKD+ARKKIQSENIPISKVIKLSKLKSD
Sbjct: 61  RTNPYKIPLPHSLHSESSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSD 120

Query: 121 YRPFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIERSC 180
           YRPFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHF+KKKKIPVPLNLRHKNWKEQIE+SC
Sbjct: 121 YRPFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFFKKKKIPVPLNLRHKNWKEQIEKSC 180

Query: 181 SSALLYLRTGTCSVVKVAKTSMEVEEIVSNVIAAIDGIAEIVPKKWSNVRSFHLKVLESI 240
           +SALLYLRTGTCSVVKVAKTSMEVEEIVSNVIAAIDGIAEIVPKKWSNVRSFHLK+LESI
Sbjct: 181 ASALLYLRTGTCSVVKVAKTSMEVEEIVSNVIAAIDGIAEIVPKKWSNVRSFHLKLLESI 240

Query: 241 ALPIYQTVPELKLKIDAAVKGEEKGTEKEDEAGKSPTPVKVSNK--KEKKSSMKKGRIHE 300
           ALPIYQ+VP+LK KI+AA+KGE+KG E+ +++GKSPTPVKVSNK  KEKK S KKGRIHE
Sbjct: 241 ALPIYQSVPDLKFKIEAAMKGEDKGIEEVEDSGKSPTPVKVSNKKEKEKKLSKKKGRIHE 300

Query: 301 VRYMDSNGGELSDEDDLNGDLDEDMDNAEVSENLKKGSDELKRKTRSRVNKGKEE-LQND 360
           VRYMDSNGGELSDED+L  DLDED DN +VSE++  GSDELK K RSRVNKGKEE LQ +
Sbjct: 301 VRYMDSNGGELSDEDELGSDLDEDTDNVKVSEDVIMGSDELKGKKRSRVNKGKEEDLQTE 360

Query: 361 LNSEKTLKKSTVVKKDDSVKQKKDKISAKKDDTVKQKKDKVAAKKKDGGNIKQKEVEDEG 420
           LN EK LKK   +KK DSVKQKKD+IS K     K+  DK+   KK GG +    V+++G
Sbjct: 361 LNVEKPLKKPISMKK-DSVKQKKDEISEK-----KKIGDKI---KKKGGLL---SVDNDG 420

Query: 421 -SAGKKVKKSGVSKSKTADGTKVKTKK 442
            SAGKKVKKSGVSK K A GTK K KK
Sbjct: 421 ESAGKKVKKSGVSKLKAA-GTK-KAKK 433

[Close]

BLAST of CmoCh15G012850 vs. ExPASy TrEMBL
Match: A0A6J1H2T1 (ribosomal L1 domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111459842 PE=4 SV=1)

HSP 1 Score: 560.8 bits (1444), Expect = 5.0e-156
Identity = 306/372 (82.26%), Postives = 333/372 (89.52%), Query Frame = 0


Query: 1   MASSDSVALSSRVRRETAEKAVESLLQWRNSKREKPQLFDQEDFLYLVVALKKIPPKGRT 60
           MAS DS  LSSRVRRETAEKAVESLLQWR+SKREKPQL DQEDFLYLVV LKKIPPKGRT
Sbjct: 1   MASPDSDTLSSRVRRETAEKAVESLLQWRSSKREKPQLLDQEDFLYLVVTLKKIPPKGRT 60

Query: 61  NPYKIPLPHSFRSDSSEICLIIDDRSRSNLTKDEARKKIQSENIPISKVIKLSKLKSDYR 120
           NPYKIPLPH  RS+SSE+CLIIDDR++SNLTKD+ARKKIQSENIPISKVIKLSKLKSDYR
Sbjct: 61  NPYKIPLPHPLRSESSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYR 120

Query: 121 PFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIERSCSS 180
           PFEAKRKLCDSYDMFFADDRVIP+LPSLLGKHFYKKKKIPVPLNLRHKNWKEQIE+SCSS
Sbjct: 121 PFEAKRKLCDSYDMFFADDRVIPMLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKSCSS 180

Query: 181 ALLYLRTGTCSVVKVAKTSMEVEEIVSNVIAAIDGIAEIVPKKWSNVRSFHLKVLESIAL 240
           ALLYLR GTCSVVKVAKTSMEVEEIV+NVIAAIDGIAEIVPKKWSNV+SFHLKVLESIAL
Sbjct: 181 ALLYLRRGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLESIAL 240

Query: 241 PIYQTVPELKLKIDAAVKGEEKGTEKE-DEAGKSPTPVKVSNKKEKKSSMKKGRIHEVRY 300
           P+YQTVPELK+KI+AAV+G+E+ T KE  +AGKSPTPVKVSNKKEKK   KKGRIHEVRY
Sbjct: 241 PLYQTVPELKMKIEAAVRGKEEETNKEVADAGKSPTPVKVSNKKEKKLGKKKGRIHEVRY 300

Query: 301 MDSNGGELSDEDDLNGDLDEDMDNAEVSENLKKGSDELKRKTRSRVNKGKEELQNDLNSE 360
           MDSNG +LS+E+D     ++D D  EVSEN++KG      K RSRV K KEELQ++LN E
Sbjct: 301 MDSNGLKLSEEED-----EQDSDVDEVSENIEKG------KKRSRVKKAKEELQSELNVE 360

Query: 361 KTLKKSTVVKKD 372
           KT KK    KK+
Sbjct: 361 KTSKKKKKKKKN 361

[Close]

BLAST of CmoCh15G012850 vs. ExPASy TrEMBL
Match: A0A6J1K7W6 (ribosomal L1 domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111491456 PE=4 SV=1)

HSP 1 Score: 543.1 bits (1398), Expect = 1.1e-150
Identity = 300/386 (77.72%), Postives = 333/386 (86.27%), Query Frame = 0


Query: 1   MASSDSVALSSRVRRETAEKAVESLLQWRNSKREKPQLFDQEDFLYLVVALKKIPPKGRT 60
           MAS DS  LSSRVRRETAEKAVESLLQWR+SKREKPQL DQEDFLYLVV LKKIPPKGRT
Sbjct: 1   MASPDSDTLSSRVRRETAEKAVESLLQWRSSKREKPQLLDQEDFLYLVVTLKKIPPKGRT 60

Query: 61  NPYKIPLPHSFRSDSSEICLIIDDRSRSNLTKDEARKKIQSENIPISKVIKLSKLKSDYR 120
           NPYKIPLPH  RS+SSE+CLIIDDR++SNLTKD+ARKK QSENIPISKVIKLSKLKSDYR
Sbjct: 61  NPYKIPLPHPLRSESSELCLIIDDRTKSNLTKDDARKKTQSENIPISKVIKLSKLKSDYR 120

Query: 121 PFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIERSCSS 180
           PFEAKRKLC+SYDMFFADDRVIP+LPSLLGKHF+KKKKIPVPLNLRHKNWKEQIE+SCSS
Sbjct: 121 PFEAKRKLCESYDMFFADDRVIPMLPSLLGKHFFKKKKIPVPLNLRHKNWKEQIEKSCSS 180

Query: 181 ALLYLRTGTCSVVKVAKTSMEVEEIVSNVIAAIDGIAEIVPKKWSNVRSFHLKVLESIAL 240
           ALLYLR GTCSVVKVAKTSMEVEEIV+NVIAAIDGIAEIVPKKWSNV+SFHLKVLESIAL
Sbjct: 181 ALLYLRRGTCSVVKVAKTSMEVEEIVNNVIAAIDGIAEIVPKKWSNVQSFHLKVLESIAL 240

Query: 241 PIYQTVPELKLKIDAAVKGEEKGTEKE-DEAGKSPTPVKVSNKKEKKSSMKKGRIHEVRY 300
           P+YQTVPELK+KI++AV+G+E+ T KE  +AGK PTP+KVSNKKEKK   KKGRI EVRY
Sbjct: 241 PLYQTVPELKMKIESAVRGKEEETNKEVADAGKGPTPIKVSNKKEKKLGKKKGRIQEVRY 300

Query: 301 MDSNGGELSDEDDLNGDLDEDMDNAEVSENLKKGSDELKRKTRSRVNKGKEELQNDLNSE 360
           MDSNG +LS+E D     ++D D  EVSEN++KG      K RSRV K KEELQ+++N E
Sbjct: 301 MDSNGLKLSEEQD-----EQDSDVDEVSENIEKG------KKRSRVKKAKEELQSEMNVE 360

Query: 361 KTLKKSTVVKKDDSVKQKKDKISAKK 386
           KT KK+   +      +K  K  A K
Sbjct: 361 KTSKKNGDEESSGKKVKKTKKFKALK 375

[Close]

BLAST of CmoCh15G012850 vs. NCBI nr
Match: XP_022928870.1 (ribosomal L1 domain-containing protein 1-like [Cucurbita moschata] >KAG7016962.1 Ribosomal L1 domain-containing protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 815.1 bits (2104), Expect = 3.0e-232
Identity = 446/446 (100.00%), Postives = 446/446 (100.00%), Query Frame = 0


Query: 1   MASSDSVALSSRVRRETAEKAVESLLQWRNSKREKPQLFDQEDFLYLVVALKKIPPKGRT 60
           MASSDSVALSSRVRRETAEKAVESLLQWRNSKREKPQLFDQEDFLYLVVALKKIPPKGRT
Sbjct: 1   MASSDSVALSSRVRRETAEKAVESLLQWRNSKREKPQLFDQEDFLYLVVALKKIPPKGRT 60

Query: 61  NPYKIPLPHSFRSDSSEICLIIDDRSRSNLTKDEARKKIQSENIPISKVIKLSKLKSDYR 120
           NPYKIPLPHSFRSDSSEICLIIDDRSRSNLTKDEARKKIQSENIPISKVIKLSKLKSDYR
Sbjct: 61  NPYKIPLPHSFRSDSSEICLIIDDRSRSNLTKDEARKKIQSENIPISKVIKLSKLKSDYR 120

Query: 121 PFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIERSCSS 180
           PFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIERSCSS
Sbjct: 121 PFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIERSCSS 180

Query: 181 ALLYLRTGTCSVVKVAKTSMEVEEIVSNVIAAIDGIAEIVPKKWSNVRSFHLKVLESIAL 240
           ALLYLRTGTCSVVKVAKTSMEVEEIVSNVIAAIDGIAEIVPKKWSNVRSFHLKVLESIAL
Sbjct: 181 ALLYLRTGTCSVVKVAKTSMEVEEIVSNVIAAIDGIAEIVPKKWSNVRSFHLKVLESIAL 240

Query: 241 PIYQTVPELKLKIDAAVKGEEKGTEKEDEAGKSPTPVKVSNKKEKKSSMKKGRIHEVRYM 300
           PIYQTVPELKLKIDAAVKGEEKGTEKEDEAGKSPTPVKVSNKKEKKSSMKKGRIHEVRYM
Sbjct: 241 PIYQTVPELKLKIDAAVKGEEKGTEKEDEAGKSPTPVKVSNKKEKKSSMKKGRIHEVRYM 300

Query: 301 DSNGGELSDEDDLNGDLDEDMDNAEVSENLKKGSDELKRKTRSRVNKGKEELQNDLNSEK 360
           DSNGGELSDEDDLNGDLDEDMDNAEVSENLKKGSDELKRKTRSRVNKGKEELQNDLNSEK
Sbjct: 301 DSNGGELSDEDDLNGDLDEDMDNAEVSENLKKGSDELKRKTRSRVNKGKEELQNDLNSEK 360

Query: 361 TLKKSTVVKKDDSVKQKKDKISAKKDDTVKQKKDKVAAKKKDGGNIKQKEVEDEGSAGKK 420
           TLKKSTVVKKDDSVKQKKDKISAKKDDTVKQKKDKVAAKKKDGGNIKQKEVEDEGSAGKK
Sbjct: 361 TLKKSTVVKKDDSVKQKKDKISAKKDDTVKQKKDKVAAKKKDGGNIKQKEVEDEGSAGKK 420

Query: 421 VKKSGVSKSKTADGTKVKTKKLKAMK 447
           VKKSGVSKSKTADGTKVKTKKLKAMK
Sbjct: 421 VKKSGVSKSKTADGTKVKTKKLKAMK 446

[Close]

BLAST of CmoCh15G012850 vs. NCBI nr
Match: KAG6579500.1 (Ribosomal L1 domain-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 809.7 bits (2090), Expect = 1.3e-230
Identity = 444/446 (99.55%), Postives = 444/446 (99.55%), Query Frame = 0


Query: 1   MASSDSVALSSRVRRETAEKAVESLLQWRNSKREKPQLFDQEDFLYLVVALKKIPPKGRT 60
           MASSDSVALSSRVRRETAEKAVESLLQWRNSKREKPQLFDQEDFLYLVVALKKIPPKGRT
Sbjct: 1   MASSDSVALSSRVRRETAEKAVESLLQWRNSKREKPQLFDQEDFLYLVVALKKIPPKGRT 60

Query: 61  NPYKIPLPHSFRSDSSEICLIIDDRSRSNLTKDEARKKIQSENIPISKVIKLSKLKSDYR 120
           NPYKIPLPHSFRSDSSEICLIIDDRSRSNLTKDEARKKIQSENIPISKVIKLSKLKSDYR
Sbjct: 61  NPYKIPLPHSFRSDSSEICLIIDDRSRSNLTKDEARKKIQSENIPISKVIKLSKLKSDYR 120

Query: 121 PFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIERSCSS 180
           PFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIERSCSS
Sbjct: 121 PFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIERSCSS 180

Query: 181 ALLYLRTGTCSVVKVAKTSMEVEEIVSNVIAAIDGIAEIVPKKWSNVRSFHLKVLESIAL 240
           ALLYLRTGTCSVVKVAKTSMEVEEIVSNVIAAIDGIAEIVPKKWSNVRSFHLKVLESIAL
Sbjct: 181 ALLYLRTGTCSVVKVAKTSMEVEEIVSNVIAAIDGIAEIVPKKWSNVRSFHLKVLESIAL 240

Query: 241 PIYQTVPELKLKIDAAVKGEEKGTEKEDEAGKSPTPVKVSNKKEKKSSMKKGRIHEVRYM 300
           PIYQTVPELKLKIDAAVKGEEKGTEKEDEAGKSPTPVKVS KKEKKSSMKKGRIHEVRYM
Sbjct: 241 PIYQTVPELKLKIDAAVKGEEKGTEKEDEAGKSPTPVKVSIKKEKKSSMKKGRIHEVRYM 300

Query: 301 DSNGGELSDEDDLNGDLDEDMDNAEVSENLKKGSDELKRKTRSRVNKGKEELQNDLNSEK 360
           DSNGGELSDEDDLNGDLDEDMDNAEVSENLKKGSDELKRKTRSRVNKGKEELQNDLNSEK
Sbjct: 301 DSNGGELSDEDDLNGDLDEDMDNAEVSENLKKGSDELKRKTRSRVNKGKEELQNDLNSEK 360

Query: 361 TLKKSTVVKKDDSVKQKKDKISAKKDDTVKQKKDKVAAKKKDGGNIKQKEVEDEGSAGKK 420
           TLKKSTVVKKDDSVKQKKDKISAKKDDTVKQKKDKVAAKKKDGGNIKQKEVEDEGSAGKK
Sbjct: 361 TLKKSTVVKKDDSVKQKKDKISAKKDDTVKQKKDKVAAKKKDGGNIKQKEVEDEGSAGKK 420

Query: 421 VKKSGVSKSKTADGTKVKTKKLKAMK 447
           VKKSGVSKSK ADGTKVKTKKLKAMK
Sbjct: 421 VKKSGVSKSKAADGTKVKTKKLKAMK 446

[Close]

BLAST of CmoCh15G012850 vs. NCBI nr
Match: XP_022970132.1 (ribosomal L1 domain-containing protein 1-like [Cucurbita maxima])

HSP 1 Score: 793.5 bits (2048), Expect = 9.4e-226
Identity = 435/446 (97.53%), Postives = 439/446 (98.43%), Query Frame = 0


Query: 1   MASSDSVALSSRVRRETAEKAVESLLQWRNSKREKPQLFDQEDFLYLVVALKKIPPKGRT 60
           MASSDSVALSSRVRRETAEKAVESLLQWRNSKREKPQLFD EDFLYLVVALKKIPPKGRT
Sbjct: 1   MASSDSVALSSRVRRETAEKAVESLLQWRNSKREKPQLFDLEDFLYLVVALKKIPPKGRT 60

Query: 61  NPYKIPLPHSFRSDSSEICLIIDDRSRSNLTKDEARKKIQSENIPISKVIKLSKLKSDYR 120
           NPYKIPLPHS RSDSSEICLIIDDRSRSNLTKD+ARKKIQSENIPISKVIKLSKLKSDYR
Sbjct: 61  NPYKIPLPHSLRSDSSEICLIIDDRSRSNLTKDDARKKIQSENIPISKVIKLSKLKSDYR 120

Query: 121 PFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIERSCSS 180
           PFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIERSCSS
Sbjct: 121 PFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIERSCSS 180

Query: 181 ALLYLRTGTCSVVKVAKTSMEVEEIVSNVIAAIDGIAEIVPKKWSNVRSFHLKVLESIAL 240
           ALLYLRTGTCSVVKVAKTSMEVEEIVSNVIAAIDGIAEIVPKKWSNVRSFHLKVLESIAL
Sbjct: 181 ALLYLRTGTCSVVKVAKTSMEVEEIVSNVIAAIDGIAEIVPKKWSNVRSFHLKVLESIAL 240

Query: 241 PIYQTVPELKLKIDAAVKGEEKGTEKEDEAGKSPTPVKVSNKKEKKSSMKKGRIHEVRYM 300
           PIYQTVPELKLKIDAAVKG+EKGTEKEDEAGKSPTPVKVSNKKEKKS MKKGRIHEVRYM
Sbjct: 241 PIYQTVPELKLKIDAAVKGDEKGTEKEDEAGKSPTPVKVSNKKEKKSRMKKGRIHEVRYM 300

Query: 301 DSNGGELSDEDDLNGDLDEDMDNAEVSENLKKGSDELKRKTRSRVNKGKEELQNDLNSEK 360
           DSNGGELSDEDDLNGDLDEDMDNAEVSENLKKGSDELKRKTRSRVNKGKEELQNDL+SEK
Sbjct: 301 DSNGGELSDEDDLNGDLDEDMDNAEVSENLKKGSDELKRKTRSRVNKGKEELQNDLSSEK 360

Query: 361 TLKKSTVVKKDDSVKQKKDKISAKKDDTVKQKKDKVAAKKKDGGNIKQKEVEDEGSAGKK 420
           TLKKST VKKDDSVKQKKDKIS KKDD+VKQKKDKVAAKKKDGGNIKQKE EDEGSAGKK
Sbjct: 361 TLKKSTGVKKDDSVKQKKDKISTKKDDSVKQKKDKVAAKKKDGGNIKQKEDEDEGSAGKK 420

Query: 421 VKKSGVSKSKTADGTKVKTKKLKAMK 447
           VKKSGVSKSK ADGTKVKTKKLKAMK
Sbjct: 421 VKKSGVSKSKAADGTKVKTKKLKAMK 446

[Close]

BLAST of CmoCh15G012850 vs. NCBI nr
Match: XP_023549753.1 (ribosomal L1 domain-containing protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 791.2 bits (2042), Expect = 4.7e-225
Identity = 434/446 (97.31%), Postives = 439/446 (98.43%), Query Frame = 0


Query: 1   MASSDSVALSSRVRRETAEKAVESLLQWRNSKREKPQLFDQEDFLYLVVALKKIPPKGRT 60
           MASSDSVALSSRVRRETAEKAVESLLQWRNSKREKPQLFDQEDFLYLVVALKKIPPKGRT
Sbjct: 1   MASSDSVALSSRVRRETAEKAVESLLQWRNSKREKPQLFDQEDFLYLVVALKKIPPKGRT 60

Query: 61  NPYKIPLPHSFRSDSSEICLIIDDRSRSNLTKDEARKKIQSENIPISKVIKLSKLKSDYR 120
           NPYKIPLPHSFRSDSSEICLIIDDRSRSNLTKD+ARKKIQ ENIPISKVIKLSKLKSDYR
Sbjct: 61  NPYKIPLPHSFRSDSSEICLIIDDRSRSNLTKDDARKKIQLENIPISKVIKLSKLKSDYR 120

Query: 121 PFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIERSCSS 180
           PFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIERSCSS
Sbjct: 121 PFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIERSCSS 180

Query: 181 ALLYLRTGTCSVVKVAKTSMEVEEIVSNVIAAIDGIAEIVPKKWSNVRSFHLKVLESIAL 240
           ALLYLRTGTCSVVKVAKTSMEVEEIVSNVIAAIDGIAEIVPKKWSNVRSFHLKVLESIAL
Sbjct: 181 ALLYLRTGTCSVVKVAKTSMEVEEIVSNVIAAIDGIAEIVPKKWSNVRSFHLKVLESIAL 240

Query: 241 PIYQTVPELKLKIDAAVKGEEKGTEKEDEAGKSPTPVKVSNKKEKKSSMKKGRIHEVRYM 300
           PIYQTVPELKLKIDAAVKGEEKG EKEDEAGKSPTPVKVS+KKEKKSSMKKGRIHEVRYM
Sbjct: 241 PIYQTVPELKLKIDAAVKGEEKGAEKEDEAGKSPTPVKVSDKKEKKSSMKKGRIHEVRYM 300

Query: 301 DSNGGELSDEDDLNGDLDEDMDNAEVSENLKKGSDELKRKTRSRVNKGKEELQNDLNSEK 360
           DSNGGELSDEDDLNGDLDEDMDNAEVSENLKKGSDELKRKTRSRVN  K+ELQNDLNSEK
Sbjct: 301 DSNGGELSDEDDLNGDLDEDMDNAEVSENLKKGSDELKRKTRSRVNNVKQELQNDLNSEK 360

Query: 361 TLKKSTVVKKDDSVKQKKDKISAKKDDTVKQKKDKVAAKKKDGGNIKQKEVEDEGSAGKK 420
           TLKKST VKKDDSVKQKK+KISAKKDDTVKQKKDKVAAKKKDGGNIKQKEVEDEGSAGKK
Sbjct: 361 TLKKSTGVKKDDSVKQKKEKISAKKDDTVKQKKDKVAAKKKDGGNIKQKEVEDEGSAGKK 420

Query: 421 VKKSGVSKSKTADGTKVKTKKLKAMK 447
           V+KSGV KSK ADGTKVKTKKLKAMK
Sbjct: 421 VRKSGVWKSKAADGTKVKTKKLKAMK 446

[Close]

BLAST of CmoCh15G012850 vs. NCBI nr
Match: XP_038875579.1 (ribosomal L1 domain-containing protein 1-like [Benincasa hispida])

HSP 1 Score: 666.4 bits (1718), Expect = 1.7e-187
Identity = 374/452 (82.74%), Postives = 398/452 (88.05%), Query Frame = 0


Query: 1   MASSDSVALSSRVRRETAEKAVESLLQWRNSKREKPQLFDQEDFLYLVVALKKIPPKGRT 60
           MAS DSV  SSRVRRETAEKAVESLLQWRNSKREKPQLFDQEDFLYLVV LKKIPPKGRT
Sbjct: 1   MASPDSVTPSSRVRRETAEKAVESLLQWRNSKREKPQLFDQEDFLYLVVTLKKIPPKGRT 60

Query: 61  NPYKIPLPHSFRSDSSEICLIIDDRSRSNLTKDEARKKIQSENIPISKVIKLSKLKSDYR 120
           NPYKIPLPHS  SDSSEICLIIDDR++SNLTKD ARKKIQSENIPISKVIKLSKLKSDYR
Sbjct: 61  NPYKIPLPHSLHSDSSEICLIIDDRTKSNLTKDHARKKIQSENIPISKVIKLSKLKSDYR 120

Query: 121 PFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIERSCSS 180
           PFEAKRKLCDSYDMFFADDRVIPL+PSLLGKHFYKKKKIPVPLNLRH+NWKEQIE+SCSS
Sbjct: 121 PFEAKRKLCDSYDMFFADDRVIPLMPSLLGKHFYKKKKIPVPLNLRHQNWKEQIEKSCSS 180

Query: 181 ALLYLRTGTCSVVKVAKTSMEVEEIVSNVIAAIDGIAEIVPKKWSNVRSFHLKVLESIAL 240
            LLYLRTGTCSVVKVAKTSMEVEEIVSNVIAAIDGIAE+VPKKWSNVRSFHLKVLESIAL
Sbjct: 181 GLLYLRTGTCSVVKVAKTSMEVEEIVSNVIAAIDGIAEVVPKKWSNVRSFHLKVLESIAL 240

Query: 241 PIYQTVPELKLKIDAAVKGEEKGTEKE---DEAGKSPTPVKVSNKKEKKSSMKKGRIHEV 300
           PIYQTVPELK KI+A+VKG+E+  EKE   ++AGKSPT VKVSNKKEKK S KKGRIHEV
Sbjct: 241 PIYQTVPELKFKIEASVKGKEEEMEKEKEKEDAGKSPTSVKVSNKKEKKLSKKKGRIHEV 300

Query: 301 RYMDSNGGELSDEDDLNGDLDEDMDNAEVSENLKKGSDELKRKTRSRVNKGKEELQNDLN 360
           RYMDSNGGELSDED+ + DLDEDMDN EVSENLK GSDELK K RSRVNKGKEELQ +LN
Sbjct: 301 RYMDSNGGELSDEDEPDSDLDEDMDNVEVSENLKMGSDELKGKKRSRVNKGKEELQTELN 360

Query: 361 SEKTLKKSTVVKKDDSVKQKKDKISAKKDDTVKQKKDKVAAKKKDGGNIKQKE----VED 420
             KTL KS  +K              KKD +VKQKKD+++ KKKDG  +KQKE    VE+
Sbjct: 361 VVKTLNKSIDMK--------------KKDGSVKQKKDEISTKKKDGDKMKQKEGFFSVEE 420

Query: 421 EGSAGKKVKKSGVSKSKTADGTKVKTKKLKAM 446
           EGSAGKKVKKSGVSK K A GTKVKTKKLK++
Sbjct: 421 EGSAGKKVKKSGVSKLKAAGGTKVKTKKLKSV 438

[Close]

BLAST of CmoCh15G012850 vs. TAIR 10
Match: AT3G58660.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 350.9 bits (899), Expect = 1.5e-96
Identity = 223/442 (50.45%), Postives = 291/442 (65.84%), Query Frame = 0


Query: 10  SSRVRRETAEKAVESLLQWRN--SKREKPQLFDQEDFLYLVVALKKIPPKGRTNPYKIPL 69
           +SRV  +T E A+  L+ WR+  SK EKPQL ++++ +YL V LKKIP K RTN Y+IPL
Sbjct: 21  TSRVSPKTVESALNGLINWRSDKSKTEKPQLLEEDELVYLFVTLKKIPQKTRTNAYRIPL 80

Query: 70  PHSFRS---DSSEICLIIDDRSRSNLTKDEARKKIQSENIPISKVIKLSKLKSDYRPFEA 129
           PH   +   DS EICLIIDDR +S LTKD+A KKI+SENIPI+KVIKLSKLKSDY+ FEA
Sbjct: 81  PHPLINPTVDSPEICLIIDDRPKSGLTKDDAMKKIKSENIPITKVIKLSKLKSDYKAFEA 140

Query: 130 KRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIERSCSSALLY 189
           KRKLCDSYDMFF D R+IPLLP ++GK F+  KKIPV L+L+H+NWK QIE++C SA+ +
Sbjct: 141 KRKLCDSYDMFFTDRRIIPLLPRVIGKKFFTSKKIPVALDLKHRNWKHQIEKACGSAMFF 200

Query: 190 LRTGTCSVVKVAKTSMEVEEIVSNVIAAIDGIAEIVPKKWSNVRSFHLKVLESIALPIYQ 249
           +RTGTCSV+KV K SM++ EI  NV+A ++G+ E +P KW+ VRS HLK+ ES+ALPIYQ
Sbjct: 201 IRTGTCSVIKVGKLSMDICEITENVMATLNGLVEFLPNKWTYVRSLHLKLSESLALPIYQ 260

Query: 250 TVPELKLKIDAAVKGEEKGTEKEDEAGKSPTPVKVSNKKEK---KSSMKKGRIHEVRYMD 309
           +VP+LKLKIDA   G  K   +E++ G+    V V   ++    K   KKGRIHEVRYMD
Sbjct: 261 SVPDLKLKIDAF--GSGKSVVQEEKEGEVEEVVAVDGGEKSVTGKGKKKKGRIHEVRYMD 320

Query: 310 SNGGELSDEDDLNGDLDEDMDNAEVSENLKKGSDELKRKTRSRVNKGKEELQNDLNSEKT 369
           SN  E+ DED++ G    D DN E+ E     S+E K K R      K+E+     SEK 
Sbjct: 321 SNVAEVLDEDEIGG----DEDNNEIVE-----SEEKKMKKR------KKEVSEVAESEKP 380

Query: 370 LKKSTVVK-KDDSVKQKKDKISAKKDDTVKQKKDKVAAKKKDGGNIKQKEVEDEGSAGKK 429
           +KK+   K K D  K  K     K    V++   K A K K   ++ + E   +G   KK
Sbjct: 381 MKKAAKGKLKPDVEKPMKKAAKGKSKPDVEKPMQKAAVKGKVKPDVVKLEKSKDGLKAKK 440

Query: 430 VKKSGVSKSKTADGTKVKTKKL 443
              + V+K ++  G K K K +
Sbjct: 441 T--TMVAKDESGGGLKPKRKSV 443

[Close]

BLAST of CmoCh15G012850 vs. TAIR 10
Match: AT2G42650.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 325.9 bits (834), Expect = 5.2e-89
Identity = 185/366 (50.55%), Postives = 256/366 (69.95%), Query Frame = 0


Query: 11  SRVRRETAEKAVESLLQWRN--SKREKPQLFDQEDFLYLVVALKKIPPKGRTNPYKIPLP 70
           SRV  +T + AV++L++  N  S+ EKPQL +++ F YLVVALKKIP +  TN Y+IPLP
Sbjct: 2   SRVSPKTVDDAVKALVKEGNEKSRTEKPQLLEEDGFFYLVVALKKIPQRNFTNAYRIPLP 61

Query: 71  H---SFRSDSSEICLIIDDRSRSNLTKDEARKKIQSENIPISKVIKLSKLKSDYRPFEAK 130
           H   +   DS E+CLIIDDR  S LT+++A+K I+SENIPI+KV+KLSKLKSDY  FE+K
Sbjct: 62  HPLINTTEDSPELCLIIDDRPESGLTEEDAKKNIKSENIPITKVVKLSKLKSDYGSFESK 121

Query: 131 RKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIERSCSSALLYL 190
           RKLCDSYDMFF+D RVIP+LP L+GK F++ KK PV ++L+H NWKEQIE++C +A+ ++
Sbjct: 122 RKLCDSYDMFFSDRRVIPMLPKLIGKKFFQSKKTPVAIDLKHMNWKEQIEKACGAAMFFM 181

Query: 191 RTGTCSVVKVAKTSMEVEEIVSNVIAAIDGIAEIVPKKWSNVRSFHLKVLESIALPIYQT 250
           RTG+CS +KVAK SME ++IV NV A ++G+ +++P +W  +RS HLK+ ES++LP+YQT
Sbjct: 182 RTGSCSAIKVAKLSMESDDIVENVTATLNGVVDVLPSRWKYIRSLHLKLSESLSLPLYQT 241

Query: 251 VPELKLKIDAAVKGEEKGTEKEDEAGKSPTPVKVSNKKEKKSSMKKGRIHEVRYMDSNGG 310
           VP L+LKID     E K  E     G + + V  S+ K  K+  K G+IHEVRYMDSN  
Sbjct: 242 VPYLQLKIDPLGVEEVKNGE-----GLAKSDVDDSSSKSVKTKKKNGKIHEVRYMDSNVS 301

Query: 311 ELSDEDDLNGDLDEDMDNAEVSENLKKGSDELKRKTRSRVNKGKEELQNDLNSEKTLKKS 370
           E   +D+ +  + ED    EV+++L    D+ KRK  S  +K     + D+   K  +KS
Sbjct: 302 ETLGDDEFDRSVGED----EVADDLNASGDKKKRKKMSS-SKSAVSGKPDIVKSKNGQKS 357

Query: 371 TVVKKD 372
             +KKD
Sbjct: 362 KKLKKD 357

[Close]

BLAST of CmoCh15G012850 vs. TAIR 10
Match: AT1G06380.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 246.9 bits (629), Expect = 3.1e-65
Identity = 125/242 (51.65%), Postives = 175/242 (72.31%), Query Frame = 0


Query: 11  SRVRRETAEKAVESLLQW--RNSKREKPQLFDQEDFLYLVVALKKIPPKGRTNPYKIPLP 70
           S+V  +   +AV+SLL+W    SK E  +  + + F+YL+V LK+IP   RTNP  IPLP
Sbjct: 16  SKVDPQNVNRAVKSLLKWWDSKSKTENSESLENDGFVYLIVTLKRIPQLDRTNPLMIPLP 75

Query: 71  HSF----RSDSSEICLIIDDRSRSNLTKDEARKKIQSENIPISKVIKLSKLKSDYRPFEA 130
           H        D  E+CLIIDD+ ++ +TK+ A KKI++E IPI+ VIK+SKLKSD R  E 
Sbjct: 76  HPLIDLVAEDPPELCLIIDDKHKNKITKEAALKKIEAEKIPITTVIKVSKLKSDLRKLEE 135

Query: 131 KRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIERSCSSALLY 190
           +++    ++++FA+ R++P+LP LLGK F KK K P+ +NLRH +WKEQIE++C SAL +
Sbjct: 136 EKR----FELYFAERRLMPMLPKLLGKEFVKKNKTPIAINLRHGSWKEQIEKACESALFF 195

Query: 191 LRTGTCSVVKVAKTSMEVEEIVSNVIAAIDGIAEIVPKKWSNVRSFHLKVLESIALPIYQ 247
           + TGTCSVVKVAK SM   EI  NV+AA++GI ++VP +W NV+ FHLK+LES+ALP+YQ
Sbjct: 196 VGTGTCSVVKVAKLSMGRNEIAENVVAAMNGIGDLVPGRWKNVKLFHLKLLESLALPVYQ 253

[Close]

BLAST of CmoCh15G012850 vs. TAIR 10
Match: AT5G22440.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 64.3 bits (155), Expect = 2.8e-10
Identity = 59/224 (26.34%), Postives = 106/224 (47.32%), Query Frame = 0


Query: 11  SRVRRETAEKAVESLLQWRNSKREKPQLFDQEDFLYLVVALKKI-PPKGRTNPYKIPLPH 70
           S+++ E   +A+ S++   + K  KP+ F +   + L + LK   P K +     + LPH
Sbjct: 2   SKLQSEAVREAISSII--THCKETKPRNFTET--IELQIGLKNYDPQKDKRFSGSVKLPH 61

Query: 71  SFRSDSSEICLIIDDRSRSNLTKDEARKKIQSENIPISKVIKLSKLKSDYRPFEAKRKLC 130
             R    +IC++ D +        E  +KI  E++ +  + KL+K K      +  +KL 
Sbjct: 62  VPR-PKMKICMLGDAQ------HVEEAEKIGLESMDVEALKKLNKNK------KLVKKLA 121

Query: 131 DSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIERSCSSALLYLRTGT 190
             +  F A + VI  +P LLG    K  K P  L    ++ + ++  + ++    L+   
Sbjct: 122 KKFHAFLASESVIKQIPRLLGPGLNKAGKFPT-LVSHQESLESKVNETKATVKFQLKKVL 181

Query: 191 CSVVKVAKTSMEVEEIVSNVIAAIDGIAEIVPKKWSNVRSFHLK 234
           C  V V   SME ++I  NV  +++ +  ++ K W NVR  +LK
Sbjct: 182 CMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLK 207

[Close]

BLAST of CmoCh15G012850 vs. TAIR 10
Match: AT5G22440.2 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 64.3 bits (155), Expect = 2.8e-10
Identity = 59/224 (26.34%), Postives = 106/224 (47.32%), Query Frame = 0


Query: 11  SRVRRETAEKAVESLLQWRNSKREKPQLFDQEDFLYLVVALKKI-PPKGRTNPYKIPLPH 70
           S+++ E   +A+ S++   + K  KP+ F +   + L + LK   P K +     + LPH
Sbjct: 2   SKLQSEAVREAISSII--THCKETKPRNFTET--IELQIGLKNYDPQKDKRFSGSVKLPH 61

Query: 71  SFRSDSSEICLIIDDRSRSNLTKDEARKKIQSENIPISKVIKLSKLKSDYRPFEAKRKLC 130
             R    +IC++ D +        E  +KI  E++ +  + KL+K K      +  +KL 
Sbjct: 62  VPR-PKMKICMLGDAQ------HVEEAEKIGLESMDVEALKKLNKNK------KLVKKLA 121

Query: 131 DSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIERSCSSALLYLRTGT 190
             +  F A + VI  +P LLG    K  K P  L    ++ + ++  + ++    L+   
Sbjct: 122 KKFHAFLASESVIKQIPRLLGPGLNKAGKFPT-LVSHQESLESKVNETKATVKFQLKKVL 181

Query: 191 CSVVKVAKTSMEVEEIVSNVIAAIDGIAEIVPKKWSNVRSFHLK 234
           C  V V   SME ++I  NV  +++ +  ++ K W NVR  +LK
Sbjct: 182 CMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLK 207

The following BLAST results are available for this feature:

BLAST of CmoCh15G012850 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A4FV97	5.7e-32	32.87	Ribosomal L1 domain-containing protein 1 OS=Bos taurus OX=9913 GN=RSL1D1 PE=2 SV...	[more]
O76021	1.3e-28	29.15	Ribosomal L1 domain-containing protein 1 OS=Homo sapiens OX=9606 GN=RSL1D1 PE=1 ...	[more]
Q5RCE6	1.3e-28	29.15	Ribosomal L1 domain-containing protein 1 OS=Pongo abelii OX=9601 GN=RSL1D1 PE=2 ...	[more]
Q8BVY0	3.3e-24	27.75	Ribosomal L1 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Rsl1d1 PE=1...	[more]
Q9UT32	3.1e-22	32.56	Putative ribosome biogenesis protein C8F11.04 OS=Schizosaccharomyces pombe (stra...	[more]

BLAST of CmoCh15G012850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ESQ8	1.5e-232	100.00	ribosomal L1 domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1HY99	4.6e-226	97.53	ribosomal L1 domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1E0M1	1.2e-170	79.87	ribosomal L1 domain-containing protein 1-like OS=Momordica charantia OX=3673 GN=...	[more]
A0A6J1H2T1	5.0e-156	82.26	ribosomal L1 domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1K7W6	1.1e-150	77.72	ribosomal L1 domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC...	[more]

BLAST of CmoCh15G012850 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022928870.1	3.0e-232	100.00	ribosomal L1 domain-containing protein 1-like [Cucurbita moschata] >KAG7016962.1...	[more]
KAG6579500.1	1.3e-230	99.55	Ribosomal L1 domain-containing protein 1, partial [Cucurbita argyrosperma subsp....	[more]
XP_022970132.1	9.4e-226	97.53	ribosomal L1 domain-containing protein 1-like [Cucurbita maxima]	[more]
XP_023549753.1	4.7e-225	97.31	ribosomal L1 domain-containing protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_038875579.1	1.7e-187	82.74	ribosomal L1 domain-containing protein 1-like [Benincasa hispida]	[more]

BLAST of CmoCh15G012850 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G58660.1	1.5e-96	50.45	Ribosomal protein L1p/L10e family	[more]
AT2G42650.1	5.2e-89	50.55	Ribosomal protein L1p/L10e family	[more]
AT1G06380.1	3.1e-65	51.65	Ribosomal protein L1p/L10e family	[more]
AT5G22440.1	2.8e-10	26.34	Ribosomal protein L1p/L10e family	[more]
AT5G22440.2	2.8e-10	26.34	Ribosomal protein L1p/L10e family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016095	Ribosomal protein L1, 3-layer alpha/beta-sandwich	GENE3D	3.40.50.790		coord: 77..180 e-value: 1.0E-15 score: 59.6
IPR028364	Ribosomal protein L1/ribosomal biogenesis protein	PFAM	PF00687	Ribosomal_L1	coord: 35..237 e-value: 1.6E-61 score: 207.6
IPR028364	Ribosomal protein L1/ribosomal biogenesis protein	CDD	cd00403	Ribosomal_L1	coord: 18..242 e-value: 8.42557E-47 score: 158.501
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 259..446
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 324..440
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 290..305
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 259..283
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 306..323
None	No IPR available	PANTHER	PTHR23105	RIBOSOMAL PROTEIN L7AE FAMILY MEMBER	coord: 11..299
None	No IPR available	PANTHER	PTHR23105:SF31	RIBOSOMAL L1 DOMAIN-CONTAINING PROTEIN 1	coord: 11..299
IPR023674	Ribosomal protein L1-like	SUPERFAMILY	56808	Ribosomal protein L1	coord: 15..243

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh15G012850.1	CmoCh15G012850.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000470	maturation of LSU-rRNA
cellular_component	GO:0030686	90S preribosome
molecular_function	GO:0003723	RNA binding