CmoCh15G012780 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAATTTAAATCCTTAATCACGGCGTTCAGGTTTATGAGTGTCTTGTCGGATTGTGTTCTGTCTGTCTGTCTGTAAAACACCACCAGGGGGTCATTCATGGAGCCATGTGACACTTTTTTTTTTTTTTCCTTTGACGAAAATGCCCTTGCCCTTATTTCATTATCCCTACTCCACCCCACCACCTCACTCTAGCCGCTTCTCTTTGCTTGCAGTGCAAGTGCCACTTCCTCAGCTAAGCTCCGAAGAAACTCCATTCTTTCTCTTTTTTATATTTTGCCCTTTTTGGCCCTGTTTATCTCTTTTTCTGGGTGTGGCGTTGGGGATAAGGAGGTTCAAGGGAAGAGGGGCAAAATGGGAATGGGAACTAGCATCTTTATCATCAGATGGATCAATTTTCTCACCATGGTATGCTTGATTTCTCTTGATTTTACCCTTTTTTTTGGTTTCTTTCTAAGATGATGTTTTATGTTCCATTGTTTTGTGGGCTTTTGTTCTGTTTTTTTTAGCTCCCATGTCTTTGGATTTAGTTTGAATGTCGTGTAATGGGTTCTGTTTATGTTGTTTCCAGTGTGTTTGTTGGGGTTTCTTGTATATGTTCGATGAGTTTCATCGTTTAGTTTTTCATTTTTTTTAAGGTTCTTGTTGGGTTGTCTTTGACATTGCTTTGAATGGTTGTTTATGTTTGGTTTGATGTCCATTTGGTTTTTTGCTCTTGATTTTTGAAAACTAAGCTTATAAACACCAAGATTGAAGAGAAAAGAAGACAAGACATCTTCCCAAGATCATGGATCAAAGATATTATAATGATGTTTTTTAATTTACAGAAAACACAGATATAAGCCATACTCCATCAAGAACAACTATCACACACGGCTCAATCCCACCGCTAGCGAATATTGTCCTCTTTGAGCTTTCTCTTAAGATTTTTAAACGCGTCTAGGTTGCGTAGCTCTGAAAGACGCGTTAACCTTTAAGGGAAGCCCGGGAGGGAAAGTCGAAAGAGACGATATCTGTTAGCGGTGGGCTTTGACTGTTATACTTGATGATGGCAAGATTGATGGCTATTGAATCACTGTGTGTGTACATTTTACAGCTTCTGGCTGTTCTTGTCATAATATTTGGGATATGGATGGGCACCAACCACGACGGTTGTCGAAAATCTCTAACGCTTCCTGTTATGGGACTCGGTGGATTCATCTTCGTGGTGTAAGTTCTATATCTTTAAGGAGTTTAATCTGATTCCATCATCCAATCTTGTTGTTATCAATACTTTTGATTCAGGTCCATAGTTGGTTTCTTGGGTGCTCTTAAGAACAATTCGATATTGCTGTGGATCGTATCCTTTTAACGAACGTTTATATGAACAGTTGATGTTAGTTTTCTTGAATTTCGCTCGACCTTGACCTTCTGCTAATAGTATTTGATCATGTTGTGCATTACGTTGGTGGCGATTCTCGTGTTTACCGTGCTGGCGTAAGTATATTTTTCTAATGTTCTTTTGTCACATGTTCCTAAAATTTATTGTCTTGAAACTATGTTGCTTCCTCACATCTCCTACTTAGATGTGTGCCTCAAGGTAGAATTTAGTACTTGTTCTTTAGTGTTCTTGTCTCACGGTCTTGCCAAACGAGATCTTCAAAGCACTTCCCGAGGCTTTTCGATGTGCTTATGCATCGTTATTGGTTATACGGTGCTACGAGAGGGTCAGTCAATCCTTAAATATTTACTCTGTCTGTGTCGGTTTTTGAGTTTATTGGCAAATTAGAAGATTCAGCAAGTACTTTTCTAACAAGCCCTCGAAAGTAACTTTCGTACGTTATGTGGTCGATTTGTAGCTCACATGAACACGTCTTGGATTTCAAGTCATGTGGGCAAAGGCTCTAACAATCAAACCCTCTAATTAATATCAAAGGTCATGATATGAGAAGTGTAACAACTCAAGCCCACCGCTAGCAAATATTGTCCGCCTTGACCTGTTACGTATCGCCATCAGTCTCACAGTTTTAAAACGCGTCTGTTAAGGAGAGTTTTCCACACCCTTATAAGGAATGTTTCTTTCTCCTCTCCAACCATTGTGAGATCTCACAATTCACCCCCTTGGGGCTAACGTCCTTGCTGGCACACCGCTCGGTACTTGATTTGATACCATCTGTAACAGTTCAAGTCCACTGCTATCAGATATTGTCCGCTTTGACCTGTTATGTATTGCCATCAGTCTGACAGTTTAAAAACGAGTCTATTAGGGAGAGTTTTCCAGACCCTTATAAGAAATGTTTCGTTTTCCTCTCCAACCAATGTGGGATCTCACAATTCACTCTCCTTGGGGGCCAGCGTTCTCACTGGCACACTGCTCGGTGTCGGCTCTGATACCATTTGTAACAGCCCAAGTCTACTGCTAACAGATATCGTCCGCTTTGGCCCGTTACGTATCGCCGTCAGCCTCACGGTTTTAAAACGCGTCTGTTATGGAGAGCTTTCCACACCCTTATAAGGAATGTTTAATTCTTCTCTCCAACCGACGTGGGATCTCACCAGAAGTACTTAACTTTCTTTGTTATCTTCGCATGAGCCCCTTCGAGATATAAAACAAAATATCAAAGTGGACATCCATAGTTGTTGTCATCTTGTAGTTAGTAACACATATCAAGCTTTGTTGTCGGTATATAATGACTCGACTTTCTTTTAGGTTCATCGTTACAAATAACGGATCGGGACATTCCGTTGCTGGCTTGAGGTGAGGATATACTCAACTCATTAAAAAAAAGGTTCATTTTAAGTCCTTTTGTCTCGAGGATACCGAGATCGAAAGAATGGAAATGGGAATGGCCATGACTCTCATGATTCTCGAAGTTCGGTACTCGTTGAGTCGATAAGCTACCGTTCTATGGACTGATGTTTTCCCCCCTTCTCTTCCCCTTTATGAGGTACAAGGAGTATCAACTACAAGACTATAGTACATGGTTTCTAAAACAGGTGAGTTCATTTTGCATAGAGAGACAGAAAGACATCATTATTTATCTTAATCTTAGCTCACCTGTTACAGCTTAATAATACTGATAACTGGATGCATTTGAGAAGCTGTCTCGTTAAATCCGAGGACTGCAACAATCTTTCGAAACGATACAAGGTTCTTGTTTCAAGCTCGGTCGATTTGAGTAAAAGAGTGATTTTTCTATCGTCTCTTCCTCACGATAGTCGTTTTGTTTGATAATTTCAGACTCTCAAGCAGTACAAGTTAGCAAAGCTTACGCCAATCGAAGCGGGTTGTTGTAGACCCCCATCGGAGTAGGTGTAACCTTCAAGTTCTTGGTTGTCACAACAGCCCAAGCTCATTGTTAGCCGATATTATTTTCTTTGGGCTTCTCTCTCAAGGTTTTTAGAACATGTCTACTAGAGAGAGGTTTCCACACCCTTATAAAGAATGCACTCGTTCCTCTCTCCAATCGATAAGATCCACTGTCTGGTCAGCGAGGACGCTGGTCCCGAAGAGAGTGGATTGTGAGATCCCACATCGATTGGAGAGAGGAACGAGTGCATTTTTTATAAGGGTGTGGAAACCTCTCCCTAGGAGACGTGTTTTAAAAACCTTGAGGAAAAGCCTGAAAGGGAAAGTCCAAAAAGCACAGTTTCTGCTAGCGGTGGGCTTGGGTGGTTACAAAAAGAAACTAAATCTATTGTCGATGTTTCGACGATATTGTCACTGATGCTATCTTTTTGCTGTCATGATATTGTAGATGTGGTTATCCTGCTGTAAATGCATCATACTATGATTTGAGCTTTCATCCTGTTGATTCAAACCATGACTGCAAACTGTACAAGAATTCGAAGGCAGTCAAGTGTTACGATTGCGACTCGTGCAAGTAAATATCTCGTAACCTTATTGTTCTGTTCGCCCCGCCCCGCCCCGCCGCCATTTATGTGGAAAATTTCATCATTATTTGATTGTTTAATCTGATCATTCAGGGCCGGAGTTGCACAGTACATGAAAACCGAATGGCGATTGGTTGCGATCTTCAACGTCGTTCTATTTGTTGTCTTGGTAAGACTCTTCCAACTCTTTAAAAGCCTGCTAACACTGTCGGGTCTTTTCAATTTCTTCCCTTTATTTCTGTAACATCAAAGCACACCGCTAGCAGATATTGTCCTTTTTAGGTTGTTTCAGGCTTCTCCTCAAGGTTTTTAAAACGCGTCTGTGAATGAGAGTTTTTCACACCCTTATAAAGAATGCTTCGTTCTCCTCCCTAGTCGATGTGGGATCTCACAATTCAACCCTTTCGGAGCCTAGCGTTCTCGCTGGCACTCGTTTCCTTCTCTAATCGACGTGAGACCCTCAATCTACTTCCTTTGGAGCCCAACGTCCTTGCTGGTACATTGCCTCGTGTCCACCCCCTTCAAGGCTCAGCTTCCTCGCTAACACATCGCTTAGTATCTGGCTCTGGTACCATTTGTAACGGTCCAAGTCAACCACAAGCAGATATTGTCCTTTTTGGGTTTTCCCTCGGTTTTTAAAACACGTCGACTGTGGAGAGGTTTCTCACTCTTATAAAGAATGTTTCGTTCTTCTCTCCAACCGACGTGAGATCTCACAATTTCTCAACTCTTACTTCCATTGCCAGCTGATTATCTACTTAGTCGGATGCTGTGCTAGACGAAAAGCTGCCACAAATCGATCTAAAGGTTAGCGGGACAGCGGTTGTGCTCGACAGACTACTTAAACATCAAAACAAACCATAGTCCTCTTGTGGCCATGTAAGTGATACCCTTTGGAAGTAGAAATCTCTACCATTCAGTGCTGCTGCCATCGCTGTGTAATATATGCAGCCAGCCATCTTTGTACGTAAAAAGTTTGTTCTTAAACCAGTACAGTGACTAATATTCAATCTCGAATCGAACAGTATTTCGACTATGA CAAATTTAAATCCTTAATCACGGCGTTCAGGTTTATGAGTGTCTTGTCGGATTGTGTTCTGTCTGTCTGTCTGTAAAACACCACCAGGGGGTCATTCATGGAGCCATGTGACACTTTTTTTTTTTTTTCCTTTGACGAAAATGCCCTTGCCCTTATTTCATTATCCCTACTCCACCCCACCACCTCACTCTAGCCGCTTCTCTTTGCTTGCAGTGCAAGTGCCACTTCCTCAGCTAAGCTCCGAAGAAACTCCATTCTTTCTCTTTTTTATATTTTGCCCTTTTTGGCCCTGTTTATCTCTTTTTCTGGGTGTGGCGTTGGGGATAAGGAGGTTCAAGGGAAGAGGGGCAAAATGGGAATGGGAACTAGCATCTTTATCATCAGATGGATCAATTTTCTCACCATGCTTCTGGCTGTTCTTGTCATAATATTTGGGATATGGATGGGCACCAACCACGACGGTTGTCGAAAATCTCTAACGCTTCCTGTTATGGGACTCGGTGGATTCATCTTCGTGGTGTCCATAGTTGGTTTCTTGGGTGCTCTTAAGAACAATTCGATATTGCTGTGGATCTATTTGATCATGTTGTGCATTACGTTGGTGGCGATTCTCGTGTTTACCGTGCTGGCGTTCATCGTTACAAATAACGGATCGGGACATTCCGTTGCTGGCTTGAGGTACAAGGAGTATCAACTACAAGACTATAGTACATGGTTTCTAAAACAGCTTAATAATACTGATAACTGGATGCATTTGAGAAGCTGTCTCGTTAAATCCGAGGACTGCAACAATCTTTCGAAACGATACAAGACTCTCAAGCAGTACAAGTTAGCAAAGCTTACGCCAATCGAAGCGGGTTGTTGTAGACCCCCATCGGAATGTGGTTATCCTGCTGTAAATGCATCATACTATGATTTGAGCTTTCATCCTGTTGATTCAAACCATGACTGCAAACTGTACAAGAATTCGAAGGCAGTCAAGTGTTACGATTGCGACTCGTGCAAGGCCGGAGTTGCACAGTACATGAAAACCGAATGGCGATTGGTTGCGATCTTCAACGTCGTTCTATTTGTTGTCTTGCTGATTATCTACTTAGTCGGATGCTGTGCTAGACGAAAAGCTGCCACAAATCGATCTAAAGGTTAGCGGGACAGCGGTTGTGCTCGACAGACTACTTAAACATCAAAACAAACCATAGTCCTCTTGTGGCCATGTAAGTGATACCCTTTGGAAGTAGAAATCTCTACCATTCAGTGCTGCTGCCATCGCTGTGTAATATATGCAGCCAGCCATCTTTGTACGTAAAAAGTTTGTTCTTAAACCAGTACAGTGACTAATATTCAATCTCGAATCGAACAGTATTTCGACTATGA ATGGGAATGGGAACTAGCATCTTTATCATCAGATGGATCAATTTTCTCACCATGCTTCTGGCTGTTCTTGTCATAATATTTGGGATATGGATGGGCACCAACCACGACGGTTGTCGAAAATCTCTAACGCTTCCTGTTATGGGACTCGGTGGATTCATCTTCGTGGTGTCCATAGTTGGTTTCTTGGGTGCTCTTAAGAACAATTCGATATTGCTGTGGATCTATTTGATCATGTTGTGCATTACGTTGGTGGCGATTCTCGTGTTTACCGTGCTGGCGTTCATCGTTACAAATAACGGATCGGGACATTCCGTTGCTGGCTTGAGGTACAAGGAGTATCAACTACAAGACTATAGTACATGGTTTCTAAAACAGCTTAATAATACTGATAACTGGATGCATTTGAGAAGCTGTCTCGTTAAATCCGAGGACTGCAACAATCTTTCGAAACGATACAAGACTCTCAAGCAGTACAAGTTAGCAAAGCTTACGCCAATCGAAGCGGGTTGTTGTAGACCCCCATCGGAATGTGGTTATCCTGCTGTAAATGCATCATACTATGATTTGAGCTTTCATCCTGTTGATTCAAACCATGACTGCAAACTGTACAAGAATTCGAAGGCAGTCAAGTGTTACGATTGCGACTCGTGCAAGGCCGGAGTTGCACAGTACATGAAAACCGAATGGCGATTGGTTGCGATCTTCAACGTCGTTCTATTTGTTGTCTTGCTGATTATCTACTTAGTCGGATGCTGTGCTAGACGAAAAGCTGCCACAAATCGATCTAAAGGTTAG MGMGTSIFIIRWINFLTMLLAVLVIIFGIWMGTNHDGCRKSLTLPVMGLGGFIFVVSIVGFLGALKNNSILLWIYLIMLCITLVAILVFTVLAFIVTNNGSGHSVAGLRYKEYQLQDYSTWFLKQLNNTDNWMHLRSCLVKSEDCNNLSKRYKTLKQYKLAKLTPIEAGCCRPPSECGYPAVNASYYDLSFHPVDSNHDCKLYKNSKAVKCYDCDSCKAGVAQYMKTEWRLVAIFNVVLFVVLLIIYLVGCCARRKAATNRSKG Homology
BLAST of CmoCh15G012780 vs. ExPASy Swiss-Prot
Match: F4I214 (Tetraspanin-10 OS=Arabidopsis thaliana OX=3702 GN=TET10 PE=2 SV=1) HSP 1 Score: 396.0 bits (1016), Expect = 3.4e-109 Identity = 190/244 (77.87%), Postives = 216/244 (88.52%), Query Frame = 0
BLAST of CmoCh15G012780 vs. ExPASy Swiss-Prot
Match: Q8S8Q6 (Tetraspanin-8 OS=Arabidopsis thaliana OX=3702 GN=TET8 PE=2 SV=1) HSP 1 Score: 198.0 bits (502), Expect = 1.4e-49 Identity = 99/246 (40.24%), Postives = 153/246 (62.20%), Query Frame = 0
BLAST of CmoCh15G012780 vs. ExPASy Swiss-Prot
Match: Q9SUD4 (Tetraspanin-7 OS=Arabidopsis thaliana OX=3702 GN=TET7 PE=2 SV=1) HSP 1 Score: 186.8 bits (473), Expect = 3.1e-46 Identity = 94/246 (38.21%), Postives = 147/246 (59.76%), Query Frame = 0
BLAST of CmoCh15G012780 vs. ExPASy Swiss-Prot
Match: Q9M1E7 (Tetraspanin-3 OS=Arabidopsis thaliana OX=3702 GN=TET3 PE=1 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 2.0e-45 Identity = 92/259 (35.52%), Postives = 156/259 (60.23%), Query Frame = 0
BLAST of CmoCh15G012780 vs. ExPASy Swiss-Prot
Match: Q9M0B7 (Tetraspanin-9 OS=Arabidopsis thaliana OX=3702 GN=TET9 PE=2 SV=1) HSP 1 Score: 179.1 bits (453), Expect = 6.5e-44 Identity = 89/252 (35.32%), Postives = 150/252 (59.52%), Query Frame = 0
BLAST of CmoCh15G012780 vs. ExPASy TrEMBL
Match: A0A6J1EL06 (tetraspanin-10-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435620 PE=3 SV=1) HSP 1 Score: 530.8 bits (1366), Expect = 3.3e-147 Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 0
BLAST of CmoCh15G012780 vs. ExPASy TrEMBL
Match: A0A6J1I237 (tetraspanin-10-like OS=Cucurbita maxima OX=3661 GN=LOC111469139 PE=3 SV=1) HSP 1 Score: 525.4 bits (1352), Expect = 1.4e-145 Identity = 261/264 (98.86%), Postives = 261/264 (98.86%), Query Frame = 0
BLAST of CmoCh15G012780 vs. ExPASy TrEMBL
Match: A0A0A0KNY7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G154840 PE=3 SV=1) HSP 1 Score: 511.1 bits (1315), Expect = 2.7e-141 Identity = 251/264 (95.08%), Postives = 259/264 (98.11%), Query Frame = 0
BLAST of CmoCh15G012780 vs. ExPASy TrEMBL
Match: A0A1S3ATI6 (tetraspanin-10 OS=Cucumis melo OX=3656 GN=LOC103482725 PE=3 SV=1) HSP 1 Score: 511.1 bits (1315), Expect = 2.7e-141 Identity = 251/264 (95.08%), Postives = 259/264 (98.11%), Query Frame = 0
BLAST of CmoCh15G012780 vs. ExPASy TrEMBL
Match: A0A6J1K8B5 (tetraspanin-10-like OS=Cucurbita maxima OX=3661 GN=LOC111491563 PE=3 SV=1) HSP 1 Score: 508.8 bits (1309), Expect = 1.3e-140 Identity = 250/264 (94.70%), Postives = 260/264 (98.48%), Query Frame = 0
BLAST of CmoCh15G012780 vs. NCBI nr
Match: XP_022928822.1 (tetraspanin-10-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 530.8 bits (1366), Expect = 6.7e-147 Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 0
BLAST of CmoCh15G012780 vs. NCBI nr
Match: KAG6579494.1 (Tetraspanin-10, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 528.5 bits (1360), Expect = 3.3e-146 Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0
BLAST of CmoCh15G012780 vs. NCBI nr
Match: XP_023549833.1 (tetraspanin-10-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 526.9 bits (1356), Expect = 9.7e-146 Identity = 261/264 (98.86%), Postives = 263/264 (99.62%), Query Frame = 0
BLAST of CmoCh15G012780 vs. NCBI nr
Match: XP_022970160.1 (tetraspanin-10-like [Cucurbita maxima]) HSP 1 Score: 525.4 bits (1352), Expect = 2.8e-145 Identity = 261/264 (98.86%), Postives = 261/264 (98.86%), Query Frame = 0
BLAST of CmoCh15G012780 vs. NCBI nr
Match: XP_038876134.1 (tetraspanin-10 [Benincasa hispida]) HSP 1 Score: 512.3 bits (1318), Expect = 2.5e-141 Identity = 252/264 (95.45%), Postives = 260/264 (98.48%), Query Frame = 0
BLAST of CmoCh15G012780 vs. TAIR 10
Match: AT1G63260.2 (tetraspanin10 ) HSP 1 Score: 408.3 bits (1048), Expect = 4.7e-114 Identity = 197/263 (74.90%), Postives = 225/263 (85.55%), Query Frame = 0
BLAST of CmoCh15G012780 vs. TAIR 10
Match: AT1G63260.1 (tetraspanin10 ) HSP 1 Score: 396.0 bits (1016), Expect = 2.4e-110 Identity = 190/244 (77.87%), Postives = 216/244 (88.52%), Query Frame = 0
BLAST of CmoCh15G012780 vs. TAIR 10
Match: AT1G63260.3 (tetraspanin10 ) HSP 1 Score: 396.0 bits (1016), Expect = 2.4e-110 Identity = 190/244 (77.87%), Postives = 216/244 (88.52%), Query Frame = 0
BLAST of CmoCh15G012780 vs. TAIR 10
Match: AT2G23810.1 (tetraspanin8 ) HSP 1 Score: 198.0 bits (502), Expect = 9.7e-51 Identity = 99/246 (40.24%), Postives = 153/246 (62.20%), Query Frame = 0
BLAST of CmoCh15G012780 vs. TAIR 10
Match: AT4G28050.1 (tetraspanin7 ) HSP 1 Score: 186.8 bits (473), Expect = 2.2e-47 Identity = 94/246 (38.21%), Postives = 147/246 (59.76%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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