CmoCh15G011560 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh15G011560
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionActin depolymerizing factor
LocationCmo_Chr15: 8081976 .. 8083466 (+)
RNA-Seq ExpressionCmoCh15G011560
SyntenyCmoCh15G011560
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTATGTTCTTTCTCTCTTATCTTTCAACCATGTGTTCATTCCCGACCACCCGACAACCTCGTTTCATAATCATTCATTTCACGTTTTATTCTTAAAGTGTTGATTATAGTTAAATCTACCGTGACCCATTTGCTTAAACTTCTGGGTCGATTAGTGATTTGACATGGTATTAGCGTTTATATTTCATTTCGCGTTTATCTTATTTGTTTGATGTTGAGCGTAGGCGAACGCTGCGTCTGGCATGGCTGTGAGAGATGAGTGTAAATTGAAGTTTTTGGAGTTAAAAGCAAAGAGAAACTACAGGTTCATCACTTTCAAGATCGAAGAACAAGAAGTGGTGATAGACAAATTGGGAAAACCGGACTCAACATATGAGGATTTCACTGGATCTCTCCCTGCTGACGAGTGTCGCTATGCTGTCTTTGATTTCGATTTCATTACTGACGAGAATTGCCAAAAGAGCAAGATTTTCTTCATTGCATGGTACGTTACTAATATTTTCAATCCAACCCGAAAATAACCTGGTGGATAAGACATCAAACATTACCACACAAAGGTATATGTCTCAACCATCTGAGTTATGTTCCGGTTGGCCACAAATAGTTTAACCTAACCTAGAAACGATGAACTATACATGTGTGACACTACCAATTCAAGTATAGCTCAATGCATAAGACATCAAAACCATCATTTGAAAGGTCGGCATGCTTTGATCTTCCACACCCAACAACAATTTGAAACAGGGCAGATTCAAACCAAGTATATGTCTAAACGAGTCGAACGATGCTTAAGCTTGCCATAAATCGTTTAACCACGATATTCATTGATATTGTGATGTCCCACATTAGTTGGAGAGGAGAACAAACCACCCTTTATAAGGGTGTGGAAACCTTCTCTAGCAGACGCGTTTTAAAGCCTTGAGGGAAAACCCGAAAGGGAAAGACCAAAGAGGACAATATTTGCTAGCGGTGGATCTGGGCCGTTACAAATGGTATCAGAGCCAGACACCGGATGATGTGCCCGCCTTCTCCCTATTCCCCGAAAGGAGGTAGACACGAGGCGGTGTGCCAATAAGGACGCTAGGCCCCAAAGGGATGTGGATTTGGGGGCGATCCCACATCGATTAGAGAAAGGAGAACAAACCACCATTTATAAGGGTGTGGAAACCTTCCCCTAGCCGACGCGTTTTAAAGCCTTGAGGGGAAACCCTAAAGAGGACAACATGAACCGTTACAGATATACCTAGGTTTGAGTCTTGTTGAATAGCTGCGTTTTCTTACTCGTTTTATTACGATATATATAATACGTTATCTAAACGATGGTACGTTGAGAAATAGGTCACCAGACATATCAAAGGTGAGAAGTAAAATGGTGTATGCAAGCTCCAAGGATAGATTCAAAAGAGAATTGGATGGTATTCAATTTGAGTTGCAAGCAACGGATCCAAGTGAGATGAGCTTTGACATTGTCAAGTCACGTGCATTTTAG

mRNA sequence

ATGGCGAACGCTGCGTCTGGCATGGCTGTGAGAGATGAGTGTAAATTGAAGTTTTTGGAGTTAAAAGCAAAGAGAAACTACAGGTTCATCACTTTCAAGATCGAAGAACAAGAAGTGGTGATAGACAAATTGGGAAAACCGGACTCAACATATGAGGATTTCACTGGATCTCTCCCTGCTGACGAGTGTCGCTATGCTGTCTTTGATTTCGATTTCATTACTGACGAGAATTGCCAAAAGAGCAAGATTTTCTTCATTGCATGGTCACCAGACATATCAAAGGTGAGAAGTAAAATGGTGTATGCAAGCTCCAAGGATAGATTCAAAAGAGAATTGGATGGTATTCAATTTGAGTTGCAAGCAACGGATCCAAGTGAGATGAGCTTTGACATTGTCAAGTCACGTGCATTTTAG

Coding sequence (CDS)

ATGGCGAACGCTGCGTCTGGCATGGCTGTGAGAGATGAGTGTAAATTGAAGTTTTTGGAGTTAAAAGCAAAGAGAAACTACAGGTTCATCACTTTCAAGATCGAAGAACAAGAAGTGGTGATAGACAAATTGGGAAAACCGGACTCAACATATGAGGATTTCACTGGATCTCTCCCTGCTGACGAGTGTCGCTATGCTGTCTTTGATTTCGATTTCATTACTGACGAGAATTGCCAAAAGAGCAAGATTTTCTTCATTGCATGGTCACCAGACATATCAAAGGTGAGAAGTAAAATGGTGTATGCAAGCTCCAAGGATAGATTCAAAAGAGAATTGGATGGTATTCAATTTGAGTTGCAAGCAACGGATCCAAGTGAGATGAGCTTTGACATTGTCAAGTCACGTGCATTTTAG

Protein sequence

MANAASGMAVRDECKLKFLELKAKRNYRFITFKIEEQEVVIDKLGKPDSTYEDFTGSLPADECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQATDPSEMSFDIVKSRAF
Homology
[Close]
BLAST of CmoCh15G011560 vs. ExPASy Swiss-Prot
Match: Q67ZM4 (Actin-depolymerizing factor 7 OS=Arabidopsis thaliana OX=3702 GN=ADF7 PE=2 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 1.9e-63
Identity = 117/136 (86.03%), Postives = 127/136 (93.38%), Query Frame = 0 

Query: 1   MANAASGMAVRDECKLKFLELKAKRNYRFITFKIEEQEVVIDKLGKPDSTYEDFTGSLPA 60
           MANAASGMAV DECKLKFLELK+KRNYRFI F+I+ Q+VV++KLG PD TY+DFT SLPA
Sbjct: 1   MANAASGMAVEDECKLKFLELKSKRNYRFIIFRIDGQQVVVEKLGNPDETYDDFTASLPA 60

Query: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ 120
           +ECRYAVFDFDFITDENCQKSKIFFIAWSPD S+VR KMVYASSKDRFKRELDGIQ ELQ
Sbjct: 61  NECRYAVFDFDFITDENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQ 120

Query: 121 ATDPSEMSFDIVKSRA 137
           ATDPSEMSFDI+KSRA
Sbjct: 121 ATDPSEMSFDIIKSRA 136

[Close]
BLAST of CmoCh15G011560 vs. ExPASy Swiss-Prot
Match: Q7XSN9 (Actin-depolymerizing factor 6 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF6 PE=2 SV=2)

HSP 1 Score: 231.1 bits (588), Expect = 7.5e-60
Identity = 112/138 (81.16%), Postives = 127/138 (92.03%), Query Frame = 0 

Query: 1   MANAASGMAVRDECKLKFLELKAKRNYRFITFKIEE--QEVVIDKLGKPDSTYEDFTGSL 60
           MAN+ASGMAV DECKLKF ELK+KR++RFITFKI+E  Q+VV+D+LG+P  TY+DFT S+
Sbjct: 1   MANSASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASM 60

Query: 61  PADECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFE 120
           PA ECRYAVFDFDF+TDENCQKSKIFFI+WSPD SKVRSKM+YASSKDRFKRELDGIQ E
Sbjct: 61  PASECRYAVFDFDFVTDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIVKSRA 137
           LQATDPSEMS DIVK+RA
Sbjct: 121 LQATDPSEMSMDIVKARA 138

[Close]
BLAST of CmoCh15G011560 vs. ExPASy Swiss-Prot
Match: Q6EUH7 (Actin-depolymerizing factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF1 PE=2 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 3.7e-59
Identity = 111/138 (80.43%), Postives = 126/138 (91.30%), Query Frame = 0 

Query: 1   MANAASGMAVRDECKLKFLELKAKRNYRFITFKIEE--QEVVIDKLGKPDSTYEDFTGSL 60
           M+N+ASGMAV DECKLKFLELKAKR++RFI FKI E  Q+VV+D+LG+P  +Y+DFT  L
Sbjct: 1   MSNSASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACL 60

Query: 61  PADECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFE 120
           PADECRYAVFDFDF+TDENCQKSKIFFI+W+PD S+VRSKM+YASSKDRFKRELDGIQ E
Sbjct: 61  PADECRYAVFDFDFVTDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIVKSRA 137
           LQATDPSEMS DIVKSRA
Sbjct: 121 LQATDPSEMSMDIVKSRA 138

[Close]
BLAST of CmoCh15G011560 vs. ExPASy Swiss-Prot
Match: Q9LQ81 (Actin-depolymerizing factor 10 OS=Arabidopsis thaliana OX=3702 GN=ADF10 PE=2 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 1.4e-58
Identity = 111/137 (81.02%), Postives = 122/137 (89.05%), Query Frame = 0 

Query: 1   MANAASGMAVRDECKLKFLELKAKRNYRFITFKIEE--QEVVIDKLGKPDSTYEDFTGSL 60
           MAN+ASGM V DECKLKFLELKAKRNYRFI FKI+E  Q+V+IDKLG P+ TYEDFT S+
Sbjct: 1   MANSASGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSI 60

Query: 61  PADECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFE 120
           P DECRYAV+D+DF T ENCQKSKIFFIAWSPD S+VRSKM+YASSKDRFKRELDGIQ E
Sbjct: 61  PEDECRYAVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIVKSR 136
           LQATDPSEMS DI+K R
Sbjct: 121 LQATDPSEMSLDIIKGR 137

[Close]
BLAST of CmoCh15G011560 vs. ExPASy Swiss-Prot
Match: P30175 (Actin-depolymerizing factor OS=Lilium longiflorum OX=4690 PE=2 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 3.2e-58
Identity = 107/139 (76.98%), Postives = 127/139 (91.37%), Query Frame = 0 

Query: 1   MANAASGMAVRDECKLKFLELKAKRNYRFITFKIEE--QEVVIDKLGKPDSTYEDFTGSL 60
           MAN++SGMAV DECKLKF+ELKAKRN+RFI FKIEE  Q+V +++LG+P+ +Y+DFT  L
Sbjct: 1   MANSSSGMAVDDECKLKFMELKAKRNFRFIVFKIEEKVQQVTVERLGQPNESYDDFTECL 60

Query: 61  PADECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFE 120
           P +ECRYAVFDFDF+TDENCQKSKIFFI+WSPD S+VRSKM+YAS+KDRFKRELDGIQ E
Sbjct: 61  PPNECRYAVFDFDFVTDENCQKSKIFFISWSPDTSRVRSKMLYASTKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIVKSRAF 138
           LQATDPSEMS DI+K+RAF
Sbjct: 121 LQATDPSEMSMDIIKARAF 139

[Close]
BLAST of CmoCh15G011560 vs. ExPASy TrEMBL
Match: A0A5A7TKY7 (Actin-depolymerizing factor 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1167G00280 PE=3 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 6.0e-68
Identity = 130/137 (94.89%), Postives = 135/137 (98.54%), Query Frame = 0 

Query: 1   MANAASGMAVRDECKLKFLELKAKRNYRFITFKIEEQEVVIDKLGKPDSTYEDFTGSLPA 60
           MANAASGMAVRDECKLKFLELKAKRNYRFI FKIE+QEVV++KLG+PD TYEDFTGSLPA
Sbjct: 1   MANAASGMAVRDECKLKFLELKAKRNYRFIIFKIEQQEVVVEKLGRPDETYEDFTGSLPA 60

Query: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ 120
           DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ
Sbjct: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ 120

Query: 121 ATDPSEMSFDIVKSRAF 138
           ATDPSEMSFDIVK+RAF
Sbjct: 121 ATDPSEMSFDIVKARAF 137

[Close]
BLAST of CmoCh15G011560 vs. ExPASy TrEMBL
Match: A0A1S3ATL2 (actin-depolymerizing factor 7 OS=Cucumis melo OX=3656 GN=LOC103482576 PE=3 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 6.0e-68
Identity = 130/137 (94.89%), Postives = 135/137 (98.54%), Query Frame = 0 

Query: 1   MANAASGMAVRDECKLKFLELKAKRNYRFITFKIEEQEVVIDKLGKPDSTYEDFTGSLPA 60
           MANAASGMAVRDECKLKFLELKAKRNYRFI FKIE+QEVV++KLG+PD TYEDFTGSLPA
Sbjct: 1   MANAASGMAVRDECKLKFLELKAKRNYRFIIFKIEQQEVVVEKLGRPDETYEDFTGSLPA 60

Query: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ 120
           DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ
Sbjct: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ 120

Query: 121 ATDPSEMSFDIVKSRAF 138
           ATDPSEMSFDIVK+RAF
Sbjct: 121 ATDPSEMSFDIVKARAF 137

[Close]
BLAST of CmoCh15G011560 vs. ExPASy TrEMBL
Match: A0A0A0KKY8 (ADF-H domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G165880 PE=3 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 7.8e-68
Identity = 130/137 (94.89%), Postives = 135/137 (98.54%), Query Frame = 0 

Query: 1   MANAASGMAVRDECKLKFLELKAKRNYRFITFKIEEQEVVIDKLGKPDSTYEDFTGSLPA 60
           MANAASGMAVRDECKLKFLELKAKRNYRFI FKIE+QEVV++KLG+PD TYEDFTGSLPA
Sbjct: 1   MANAASGMAVRDECKLKFLELKAKRNYRFIIFKIEQQEVVVEKLGQPDETYEDFTGSLPA 60

Query: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ 120
           DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ
Sbjct: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ 120

Query: 121 ATDPSEMSFDIVKSRAF 138
           ATDPSEMSFDIVK+RAF
Sbjct: 121 ATDPSEMSFDIVKARAF 137

[Close]
BLAST of CmoCh15G011560 vs. ExPASy TrEMBL
Match: A0A6J1IBQ3 (actin-depolymerizing factor 7-like OS=Cucurbita maxima OX=3661 GN=LOC111471508 PE=3 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 5.0e-67
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 8   MAVRDECKLKFLELKAKRNYRFITFKIEEQEVVIDKLGKPDSTYEDFTGSLPADECRYAV 67
           MAVRDECKLKFLELKAKRNYRFITFKIEEQEVVIDKLGKPDSTYEDFTGSLPADECRYAV
Sbjct: 1   MAVRDECKLKFLELKAKRNYRFITFKIEEQEVVIDKLGKPDSTYEDFTGSLPADECRYAV 60

Query: 68  FDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQATDPSEM 127
           FDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQATDPSEM
Sbjct: 61  FDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQATDPSEM 120

Query: 128 SFDIVKSRAF 138
           SFDIVKSRAF
Sbjct: 121 SFDIVKSRAF 130

[Close]
BLAST of CmoCh15G011560 vs. ExPASy TrEMBL
Match: A0A6J1E368 (actin-depolymerizing factor 7-like OS=Cucurbita moschata OX=3662 GN=LOC111430379 PE=3 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 5.0e-67
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 8   MAVRDECKLKFLELKAKRNYRFITFKIEEQEVVIDKLGKPDSTYEDFTGSLPADECRYAV 67
           MAVRDECKLKFLELKAKRNYRFITFKIEEQEVVIDKLGKPDSTYEDFTGSLPADECRYAV
Sbjct: 1   MAVRDECKLKFLELKAKRNYRFITFKIEEQEVVIDKLGKPDSTYEDFTGSLPADECRYAV 60

Query: 68  FDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQATDPSEM 127
           FDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQATDPSEM
Sbjct: 61  FDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQATDPSEM 120

Query: 128 SFDIVKSRAF 138
           SFDIVKSRAF
Sbjct: 121 SFDIVKSRAF 130

[Close]
BLAST of CmoCh15G011560 vs. NCBI nr
Match: KAG6579390.1 (Oxalate--CoA ligase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 274.2 bits (700), Expect = 5.9e-70
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0 

Query: 2   ANAASGMAVRDECKLKFLELKAKRNYRFITFKIEEQEVVIDKLGKPDSTYEDFTGSLPAD 61
           ANAASGMAVRDECKLKFLELKAKRNYRFITFKIEEQEVVIDKLGKPDSTYEDFTGSLPAD
Sbjct: 489 ANAASGMAVRDECKLKFLELKAKRNYRFITFKIEEQEVVIDKLGKPDSTYEDFTGSLPAD 548

Query: 62  ECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQA 121
           ECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQA
Sbjct: 549 ECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQA 608

Query: 122 TDPSEMSFDIVKSRAF 138
           TDPSEMSFDIVKSRAF
Sbjct: 609 TDPSEMSFDIVKSRAF 624

[Close]
BLAST of CmoCh15G011560 vs. NCBI nr
Match: XP_008437023.1 (PREDICTED: actin-depolymerizing factor 7 [Cucumis melo] >KAA0043488.1 actin-depolymerizing factor 7 [Cucumis melo var. makuwa])

HSP 1 Score: 266.5 bits (680), Expect = 1.2e-67
Identity = 130/137 (94.89%), Postives = 135/137 (98.54%), Query Frame = 0 

Query: 1   MANAASGMAVRDECKLKFLELKAKRNYRFITFKIEEQEVVIDKLGKPDSTYEDFTGSLPA 60
           MANAASGMAVRDECKLKFLELKAKRNYRFI FKIE+QEVV++KLG+PD TYEDFTGSLPA
Sbjct: 1   MANAASGMAVRDECKLKFLELKAKRNYRFIIFKIEQQEVVVEKLGRPDETYEDFTGSLPA 60

Query: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ 120
           DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ
Sbjct: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ 120

Query: 121 ATDPSEMSFDIVKSRAF 138
           ATDPSEMSFDIVK+RAF
Sbjct: 121 ATDPSEMSFDIVKARAF 137

[Close]
BLAST of CmoCh15G011560 vs. NCBI nr
Match: XP_004152385.2 (actin-depolymerizing factor 7 [Cucumis sativus] >KGN50293.1 hypothetical protein Csa_000362 [Cucumis sativus])

HSP 1 Score: 266.2 bits (679), Expect = 1.6e-67
Identity = 130/137 (94.89%), Postives = 135/137 (98.54%), Query Frame = 0 

Query: 1   MANAASGMAVRDECKLKFLELKAKRNYRFITFKIEEQEVVIDKLGKPDSTYEDFTGSLPA 60
           MANAASGMAVRDECKLKFLELKAKRNYRFI FKIE+QEVV++KLG+PD TYEDFTGSLPA
Sbjct: 1   MANAASGMAVRDECKLKFLELKAKRNYRFIIFKIEQQEVVVEKLGQPDETYEDFTGSLPA 60

Query: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ 120
           DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ
Sbjct: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ 120

Query: 121 ATDPSEMSFDIVKSRAF 138
           ATDPSEMSFDIVK+RAF
Sbjct: 121 ATDPSEMSFDIVKARAF 137

[Close]
BLAST of CmoCh15G011560 vs. NCBI nr
Match: XP_022922369.1 (actin-depolymerizing factor 7-like [Cucurbita moschata] >XP_022972983.1 actin-depolymerizing factor 7-like [Cucurbita maxima] >KAG7016871.1 Actin-depolymerizing factor 7, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 263.5 bits (672), Expect = 1.0e-66
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 8   MAVRDECKLKFLELKAKRNYRFITFKIEEQEVVIDKLGKPDSTYEDFTGSLPADECRYAV 67
           MAVRDECKLKFLELKAKRNYRFITFKIEEQEVVIDKLGKPDSTYEDFTGSLPADECRYAV
Sbjct: 1   MAVRDECKLKFLELKAKRNYRFITFKIEEQEVVIDKLGKPDSTYEDFTGSLPADECRYAV 60

Query: 68  FDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQATDPSEM 127
           FDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQATDPSEM
Sbjct: 61  FDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQATDPSEM 120

Query: 128 SFDIVKSRAF 138
           SFDIVKSRAF
Sbjct: 121 SFDIVKSRAF 130

[Close]
BLAST of CmoCh15G011560 vs. NCBI nr
Match: XP_022159651.1 (actin-depolymerizing factor 7 [Momordica charantia])

HSP 1 Score: 261.5 bits (667), Expect = 4.0e-66
Identity = 128/137 (93.43%), Postives = 134/137 (97.81%), Query Frame = 0 

Query: 1   MANAASGMAVRDECKLKFLELKAKRNYRFITFKIEEQEVVIDKLGKPDSTYEDFTGSLPA 60
           MANAASGMAVRDECKLKFLELKAKRNYRFI FKI++QEVV+DKLGKP+ TYEDFTGSLP+
Sbjct: 1   MANAASGMAVRDECKLKFLELKAKRNYRFIIFKIDQQEVVVDKLGKPEETYEDFTGSLPS 60

Query: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ 120
           DECRYAVFDFDFITDEN QKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ
Sbjct: 61  DECRYAVFDFDFITDENVQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ 120

Query: 121 ATDPSEMSFDIVKSRAF 138
           ATDPSEMSFDIVK+RAF
Sbjct: 121 ATDPSEMSFDIVKARAF 137

[Close]
BLAST of CmoCh15G011560 vs. TAIR 10
Match: AT4G25590.1 (actin depolymerizing factor 7 )

HSP 1 Score: 243.0 bits (619), Expect = 1.4e-64
Identity = 117/136 (86.03%), Postives = 127/136 (93.38%), Query Frame = 0 

Query: 1   MANAASGMAVRDECKLKFLELKAKRNYRFITFKIEEQEVVIDKLGKPDSTYEDFTGSLPA 60
           MANAASGMAV DECKLKFLELK+KRNYRFI F+I+ Q+VV++KLG PD TY+DFT SLPA
Sbjct: 1   MANAASGMAVEDECKLKFLELKSKRNYRFIIFRIDGQQVVVEKLGNPDETYDDFTASLPA 60

Query: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ 120
           +ECRYAVFDFDFITDENCQKSKIFFIAWSPD S+VR KMVYASSKDRFKRELDGIQ ELQ
Sbjct: 61  NECRYAVFDFDFITDENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQ 120

Query: 121 ATDPSEMSFDIVKSRA 137
           ATDPSEMSFDI+KSRA
Sbjct: 121 ATDPSEMSFDIIKSRA 136

[Close]
BLAST of CmoCh15G011560 vs. TAIR 10
Match: AT1G01750.1 (actin depolymerizing factor 11 )

HSP 1 Score: 226.9 bits (577), Expect = 1.0e-59
Identity = 111/137 (81.02%), Postives = 122/137 (89.05%), Query Frame = 0 

Query: 1   MANAASGMAVRDECKLKFLELKAKRNYRFITFKIEE--QEVVIDKLGKPDSTYEDFTGSL 60
           MAN+ASGM V DECKLKFLELKAKRNYRFI FKI+E  Q+V+IDKLG P+ TYEDFT S+
Sbjct: 1   MANSASGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSI 60

Query: 61  PADECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFE 120
           P DECRYAV+D+DF T ENCQKSKIFFIAWSPD S+VRSKM+YASSKDRFKRELDGIQ E
Sbjct: 61  PEDECRYAVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIVKSR 136
           LQATDPSEMS DI+K R
Sbjct: 121 LQATDPSEMSLDIIKGR 137

[Close]
BLAST of CmoCh15G011560 vs. TAIR 10
Match: AT5G52360.1 (actin depolymerizing factor 10 )

HSP 1 Score: 223.4 bits (568), Expect = 1.1e-58
Identity = 109/136 (80.15%), Postives = 119/136 (87.50%), Query Frame = 0 

Query: 1   MANAASGMAVRDECKLKFLELKAKRNYRFITFKIEEQEVVIDKLGKPDSTYEDFTGSLPA 60
           MANAASGMAV DECKLKFLELKAKRNYRFI F+I+ Q+VV++KLG P   Y+DFT  LP 
Sbjct: 1   MANAASGMAVEDECKLKFLELKAKRNYRFIIFRIDGQQVVVEKLGSPQENYDDFTNYLPP 60

Query: 61  DECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFELQ 120
           +ECRYAV+DFDF T EN QKSKIFFIAWSPD S+VR KMVYASSKDRFKRELDGIQ ELQ
Sbjct: 61  NECRYAVYDFDFTTAENIQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQ 120

Query: 121 ATDPSEMSFDIVKSRA 137
           ATDPSEMS DI+KSRA
Sbjct: 121 ATDPSEMSLDIIKSRA 136

[Close]
BLAST of CmoCh15G011560 vs. TAIR 10
Match: AT4G00680.1 (actin depolymerizing factor 8 )

HSP 1 Score: 219.5 bits (558), Expect = 1.6e-57
Identity = 105/137 (76.64%), Postives = 121/137 (88.32%), Query Frame = 0 

Query: 1   MANAASGMAVRDECKLKFLELKAKRNYRFITFKIEE--QEVVIDKLGKPDSTYEDFTGSL 60
           MAN+ASGM V DECK+KFLELKAKR YRFI FKI+E  Q+V I+KLG P+ TY+DFT S+
Sbjct: 1   MANSASGMHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSI 60

Query: 61  PADECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFE 120
           P DECRYAV+DFDF T++NCQKSKIFFIAWSPD S+VRSKM+YASSKDRFKRE++GIQ E
Sbjct: 61  PDDECRYAVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVE 120

Query: 121 LQATDPSEMSFDIVKSR 136
           LQATDPSEMS DI+K R
Sbjct: 121 LQATDPSEMSLDIIKGR 137

[Close]
BLAST of CmoCh15G011560 vs. TAIR 10
Match: AT5G59890.1 (actin depolymerizing factor 4 )

HSP 1 Score: 219.5 bits (558), Expect = 1.6e-57
Identity = 103/137 (75.18%), Postives = 123/137 (89.78%), Query Frame = 0 

Query: 1   MANAASGMAVRDECKLKFLELKAKRNYRFITFKIEE--QEVVIDKLGKPDSTYEDFTGSL 60
           MANAASGMAV D+CKL+FLELKAKR +RFI +KIEE  ++V+++K+G+P  TYEDF  SL
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASL 60

Query: 61  PADECRYAVFDFDFITDENCQKSKIFFIAWSPDISKVRSKMVYASSKDRFKRELDGIQFE 120
           PADECRYA++DFDF+T ENCQKSKIFFIAW PD++KVRSKM+YASSKDRFKRELDGIQ E
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMSFDIVKSR 136
           LQATDP+EM  D++KSR
Sbjct: 121 LQATDPTEMDLDVLKSR 137

The following BLAST results are available for this feature:
BLAST of CmoCh15G011560 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q67ZM41.9e-6386.03Actin-depolymerizing factor 7 OS=Arabidopsis thaliana OX=3702 GN=ADF7 PE=2 SV=1[more]
Q7XSN97.5e-6081.16Actin-depolymerizing factor 6 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF6 P... [more]
Q6EUH73.7e-5980.43Actin-depolymerizing factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF1 P... [more]
Q9LQ811.4e-5881.02Actin-depolymerizing factor 10 OS=Arabidopsis thaliana OX=3702 GN=ADF10 PE=2 SV=... [more]
P301753.2e-5876.98Actin-depolymerizing factor OS=Lilium longiflorum OX=4690 PE=2 SV=1[more]
BLAST of CmoCh15G011560 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TKY76.0e-6894.89Actin-depolymerizing factor 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... [more]
A0A1S3ATL26.0e-6894.89actin-depolymerizing factor 7 OS=Cucumis melo OX=3656 GN=LOC103482576 PE=3 SV=1[more]
A0A0A0KKY87.8e-6894.89ADF-H domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G165880 PE=3 ... [more]
A0A6J1IBQ35.0e-67100.00actin-depolymerizing factor 7-like OS=Cucurbita maxima OX=3661 GN=LOC111471508 P... [more]
A0A6J1E3685.0e-67100.00actin-depolymerizing factor 7-like OS=Cucurbita moschata OX=3662 GN=LOC111430379... [more]
BLAST of CmoCh15G011560 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6579390.15.9e-70100.00Oxalate--CoA ligase, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_008437023.11.2e-6794.89PREDICTED: actin-depolymerizing factor 7 [Cucumis melo] >KAA0043488.1 actin-depo... [more]
XP_004152385.21.6e-6794.89actin-depolymerizing factor 7 [Cucumis sativus] >KGN50293.1 hypothetical protein... [more]
XP_022922369.11.0e-66100.00actin-depolymerizing factor 7-like [Cucurbita moschata] >XP_022972983.1 actin-de... [more]
XP_022159651.14.0e-6693.43actin-depolymerizing factor 7 [Momordica charantia][more]
BLAST of CmoCh15G011560 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G25590.11.4e-6486.03actin depolymerizing factor 7 [more]
AT1G01750.11.0e-5981.02actin depolymerizing factor 11 [more]
AT5G52360.11.1e-5880.15actin depolymerizing factor 10 [more]
AT4G00680.11.6e-5776.64actin depolymerizing factor 8 [more]
AT5G59890.11.6e-5775.18actin depolymerizing factor 4 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002108Actin-depolymerising factor homology domainSMARTSM00102adf_2coord: 12..137
e-value: 2.9E-54
score: 196.3
IPR002108Actin-depolymerising factor homology domainPFAMPF00241Cofilin_ADFcoord: 14..134
e-value: 5.3E-35
score: 119.9
IPR002108Actin-depolymerising factor homology domainPROSITEPS51263ADF_Hcoord: 5..137
score: 35.159447
IPR029006ADF-H/Gelsolin-like domain superfamilyGENE3D3.40.20.10Severincoord: 1..136
e-value: 1.6E-49
score: 169.8
NoneNo IPR availablePANTHERPTHR11913:SF92COFILIN/ACTIN-DEPOLYMERIZING FACTOR-LIKE PROTEINcoord: 2..137
NoneNo IPR availableSUPERFAMILY55753Actin depolymerizing proteinscoord: 2..135
IPR017904ADF/CofilinPANTHERPTHR11913COFILIN-RELATEDcoord: 2..137
IPR017904ADF/CofilinCDDcd11286ADF_cofilin_likecoord: 6..136
e-value: 3.87514E-60
score: 179.675

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh15G011560.1CmoCh15G011560.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030042 actin filament depolymerization
cellular_component GO:0015629 actin cytoskeleton
cellular_component GO:0005737 cytoplasm
molecular_function GO:0051015 actin filament binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003779 actin binding