CmoCh15G010470 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTGTATGTGGCTTAGTATTCTTTTGGATCACTATTGCATTTAATTTTGATGGAGGCGAAATGTAGAATAATTGAAGGATTAAAATATCTATGTCCTAAATTGGTTGTTCTTGATTTATCAAATTATTTCTTTTATAACATCTACGCTGGATTGAAGGCACTCAATTGCGATGTTGAATGGATATAGCACCTTTCTTCCTTGCAGTTCTTTAGCTTGACTGGTACGGATCTTTGAGAGGCTTCCAATTTAATGCAAGTGTTAAGTTCTCTTCCGTTATTGTCATCCTTAATATTGAGTGATTGTAGCGTTCAAAACAACCAATTGTCTTTCAGTTCCATGAATTCTTCGTTTCTTTCTAGAATTCAACGTCTAGATTTGTCTAGGAATAATTTTCTTGGTCCAATTCCTAAGGTTTTTCACAACATGACGTCCTTTAAATTCCTAGACCTTTCGAATAATAAGTTCACTTCCACTTCCATTGATGGTGGAGTTTCATCCTTCATATTTGGAAACAATTGTATCCTAAAAGCACTTGATTTATCGAACAATTATGATCTTGGTGGAGATGTGTTTGGAAGTTATGAAAATGAATCTATGCCTTGTAGTCGATGTGATCTGCAAGGGCTTAAACTAGAGGGTACATCTCTGAAAACCAAAATTCCAGATTGGTTAGGAAAATTCAAAAACTTGAGGTTTCTTTCCCTCTCTAGGAGTCACATTTATGGTTCAATTCCTGCTTCATTTGGCAATTTATCCAGAGTTGAGGATTTAGATCTTTCAGACAATGCTCCAACCGGAGCAATTCCAACTTCATTTGGAAGATTATTAAATTTGAGAATATTAAGTCTCGAATGGAATAGATTGGAGGAGTTGGGGCAGGAATGTTTTATCCAACTTGAAAATTTGGAGGTGCTAGACATATCAAATAACTCGCTCAAAGGCATGCTTGAAGAAGCTCATTTTGCGAATCTCTCTCAGCTGA ATGATTGTATGTGGCTTAGTATTCTTTTGGATCACTATTGCATTTAATTTTGATGGAGGCGAAATGAGTCACATTTATGGTTCAATTCCTGCTTCATTTGGCAATTTATCCAGAGTTGAGGATTTAGATCTTTCAGACAATGCTCCAACCGGAGCAATTCCAACTTCATTTGGAAGATTATTAAATTTGAGAATATTAAGTCTCGAATGGAATAGATTGGAGGAGTTGGGGCAGGAATGTTTTATCCAACTTGAAAATTTGGAGACATATCAAATAACTCGCTCAAAGGCATGCTTGAAGAAGCTCATTTTGCGAATCTCTCTCAGCTGA ATGATTGTATGTGGCTTAGTATTCTTTTGGATCACTATTGCATTTAATTTTGATGGAGGCGAAATGAGTCACATTTATGGTTCAATTCCTGCTTCATTTGGCAATTTATCCAGAGTTGAGGATTTAGATCTTTCAGACAATGCTCCAACCGGAGCAATTCCAACTTCATTTGGAAGATTATTAAATTTGAGAATATTAAGTCTCGAATGGAATAGATTGGAGGAGTTGGGGCAGGAATGTTTTATCCAACTTGAAAATTTGGAGACATATCAAATAACTCGCTCAAAGGCATGCTTGAAGAAGCTCATTTTGCGAATCTCTCTCAGCTGA MIVCGLVFFWITIAFNFDGGEMSHIYGSIPASFGNLSRVEDLDLSDNAPTGAIPTSFGRLLNLRILSLEWNRLEELGQECFIQLENLETYQITRSKACLKKLILRISLS Homology
BLAST of CmoCh15G010470 vs. ExPASy Swiss-Prot
Match: P93194 (Receptor-like protein kinase OS=Ipomoea nil OX=35883 GN=INRPK1 PE=2 SV=2) HSP 1 Score: 56.6 bits (135), Expect = 2.0e-07 Identity = 31/68 (45.59%), Postives = 41/68 (60.29%), Query Frame = 0
BLAST of CmoCh15G010470 vs. ExPASy Swiss-Prot
Match: O22938 (Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 OS=Arabidopsis thaliana OX=3702 GN=PXC3 PE=2 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 5.9e-07 Identity = 33/68 (48.53%), Postives = 42/68 (61.76%), Query Frame = 0
BLAST of CmoCh15G010470 vs. ExPASy Swiss-Prot
Match: Q9C9H6 (Receptor-like protein 11 OS=Arabidopsis thaliana OX=3702 GN=RLP11 PE=3 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 2.9e-06 Identity = 28/68 (41.18%), Postives = 39/68 (57.35%), Query Frame = 0
BLAST of CmoCh15G010470 vs. ExPASy Swiss-Prot
Match: C0LGP4 (Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana OX=3702 GN=At3g47570 PE=2 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 3.8e-06 Identity = 33/72 (45.83%), Postives = 42/72 (58.33%), Query Frame = 0
BLAST of CmoCh15G010470 vs. ExPASy Swiss-Prot
Match: C0LGT1 (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana OX=3702 GN=At5g10290 PE=1 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 3.8e-06 Identity = 28/63 (44.44%), Postives = 35/63 (55.56%), Query Frame = 0
BLAST of CmoCh15G010470 vs. ExPASy TrEMBL
Match: A0A6J1ER26 (probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Cucurbita moschata OX=3662 GN=LOC111435784 PE=4 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 1.0e-25 Identity = 61/73 (83.56%), Postives = 67/73 (91.78%), Query Frame = 0
BLAST of CmoCh15G010470 vs. ExPASy TrEMBL
Match: A0A6J1I4N6 (LRR receptor-like serine/threonine-protein kinase GSO1 OS=Cucurbita maxima OX=3661 GN=LOC111469130 PE=4 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 1.7e-25 Identity = 61/73 (83.56%), Postives = 66/73 (90.41%), Query Frame = 0
BLAST of CmoCh15G010470 vs. ExPASy TrEMBL
Match: A0A6J1ELT4 (receptor-like protein 12 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111435783 PE=4 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 7.4e-21 Identity = 54/73 (73.97%), Postives = 61/73 (83.56%), Query Frame = 0
BLAST of CmoCh15G010470 vs. ExPASy TrEMBL
Match: A0A6J1EM51 (receptor-like protein 12 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435783 PE=4 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 7.4e-21 Identity = 54/73 (73.97%), Postives = 61/73 (83.56%), Query Frame = 0
BLAST of CmoCh15G010470 vs. ExPASy TrEMBL
Match: A0A6J1EQ78 (LRR receptor-like serine/threonine-protein kinase GSO1 OS=Cucurbita moschata OX=3662 GN=LOC111435629 PE=4 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 1.4e-19 Identity = 53/71 (74.65%), Postives = 59/71 (83.10%), Query Frame = 0
BLAST of CmoCh15G010470 vs. NCBI nr
Match: KAG6579677.1 (Receptor-like protein EIX2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 129.4 bits (324), Expect = 1.9e-26 Identity = 63/73 (86.30%), Postives = 67/73 (91.78%), Query Frame = 0
BLAST of CmoCh15G010470 vs. NCBI nr
Match: XP_022929098.1 (probable leucine-rich repeat receptor-like protein kinase At1g35710 [Cucurbita moschata]) HSP 1 Score: 125.9 bits (315), Expect = 2.1e-25 Identity = 61/73 (83.56%), Postives = 67/73 (91.78%), Query Frame = 0
BLAST of CmoCh15G010470 vs. NCBI nr
Match: XP_022970144.1 (LRR receptor-like serine/threonine-protein kinase GSO1 [Cucurbita maxima]) HSP 1 Score: 125.2 bits (313), Expect = 3.5e-25 Identity = 61/73 (83.56%), Postives = 66/73 (90.41%), Query Frame = 0
BLAST of CmoCh15G010470 vs. NCBI nr
Match: KAG6579681.1 (Receptor-like protein EIX2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 110.5 bits (275), Expect = 9.0e-21 Identity = 54/71 (76.06%), Postives = 61/71 (85.92%), Query Frame = 0
BLAST of CmoCh15G010470 vs. NCBI nr
Match: XP_022929097.1 (receptor-like protein 12 isoform X2 [Cucurbita moschata]) HSP 1 Score: 109.8 bits (273), Expect = 1.5e-20 Identity = 54/73 (73.97%), Postives = 61/73 (83.56%), Query Frame = 0
BLAST of CmoCh15G010470 vs. TAIR 10
Match: AT2G41820.1 (Leucine-rich repeat protein kinase family protein ) HSP 1 Score: 55.1 bits (131), Expect = 4.2e-08 Identity = 33/68 (48.53%), Postives = 42/68 (61.76%), Query Frame = 0
BLAST of CmoCh15G010470 vs. TAIR 10
Match: AT5G51350.1 (Leucine-rich repeat transmembrane protein kinase family protein ) HSP 1 Score: 53.1 bits (126), Expect = 1.6e-07 Identity = 27/67 (40.30%), Postives = 40/67 (59.70%), Query Frame = 0
BLAST of CmoCh15G010470 vs. TAIR 10
Match: AT1G71390.1 (receptor like protein 11 ) HSP 1 Score: 52.8 bits (125), Expect = 2.1e-07 Identity = 28/68 (41.18%), Postives = 39/68 (57.35%), Query Frame = 0
BLAST of CmoCh15G010470 vs. TAIR 10
Match: AT3G47580.1 (Leucine-rich repeat protein kinase family protein ) HSP 1 Score: 52.8 bits (125), Expect = 2.1e-07 Identity = 25/51 (49.02%), Postives = 33/51 (64.71%), Query Frame = 0
BLAST of CmoCh15G010470 vs. TAIR 10
Match: AT3G47570.1 (Leucine-rich repeat protein kinase family protein ) HSP 1 Score: 52.4 bits (124), Expect = 2.7e-07 Identity = 33/72 (45.83%), Postives = 42/72 (58.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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