CmoCh15G009020 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh15G009020
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationCmo_Chr15: 4545653 .. 4547482 (+)
RNA-Seq ExpressionCmoCh15G009020
SyntenyCmoCh15G009020
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGTCACTGGCTCTCCCGACTGGTCACTCCCCTCATCAACCTGTTTCAGAAAATCCCGTCTCCTTACTTTCATCCCTGCCTCCAATCTCGCTCTCCTTTTCTCTCTTCCAAATCTTCGATCTCTTCACCTAAATTCCTCCGGGTGCCCGTCCCCAATCCTAGAATCATCGCCCACTTCCCTCCCCGAGATCGATTCGGACTCTAATCTTCAGGATTTTCAACTTCCCTCGTCGTCCAGTGTAGAAGATTTGAACGATTTCTTATGTGGATTACCCCAAAACCCCGGACGGGAGGATTTGATCTATGAGTACTACGTGAAAGCGAAGGAGACGCCAGGGTTTAGACCTGAGAAATCAACATTGAGGCATCTCATCAGGTACTTAGTGCGATCGAAGAACTGGAATTTGATTTTGTTAGTTTCTAGAGATTTTGTGGATTATGATGTTTGCCCTGATAGAGATACTTGTTCTAGATTGGTTAGTAGTTGCGTTAGAGGTAGAAAATTTAAAGTTGTTAGGGCTCTGCTTGAGGTTTTTGAACGGGATAGGGATGTTGCTACGGCTGCATTTGAAGCTGCCATGAGAGGCTACAATAAGCTTCACATGTACAAAAGTACTATCCTGGTTTTCCAGCGCTTGAAATCTGCTAAAATTGAAGCAGATTCTGGATGTTACTGCAGGGTCATGGAAGCCTACCTTAAACTTGGGGATTCTGAGAGAATCATGGAACTGTTTAATGAAATTGAGAGTAGGATTTCTGATTTTACACCCTTTTCCACCAAAATTTATGGGATACTTTGTAAGTCATTAGCGAAATCGGGGCGAGTTTTCGAGTCGCTCGAGTTCTTTAGAGATATGAGGAAGAAAGGGATTGTAGAAGATTACACCATTTACTCTGCTTTGATATGCACTTTTGCAAGTATCCAAGAAGTTAAATTAGCTGAAGATCTTTACAATGAAGCAAAAACCAAGAAGTTATTGAGAGACCCTGCCATGTTTCAAAAGCTTATATTGATGTATATTCAACAAGGGTCATTAGAGAAAGCACTTGAGATTGTTGAAGTGATGAAGGACTTCAAAATTGGTGTATCAGATTGCATTTTCTGTGCAATTGTCAATGGCTACGCCACGAGAAGGGGCTATAATGCTGCGGTTAATGTTTACGAAAAGCTGATTAGAGACGAGTGCGAGCCAGGACAAGTGACGTACGCCTTGGCGATCAACGCTTACTGCCGTGTCGGGCTGTACTCAAAAGCGGAGGACGTGTTTGTAGAAATGGAGGAGAAGGGGTTTGACAAATGTGTAGTTGCTTACTCTAGCTTGATATCAATGTATGGGAAGACAGGGAGATTGAAGGATGCAATGAGGCTGTTAGCAAAGATGAAAGAAAGAGGGTGTCAGCCAAATGTTTGGATTTACAATATCCTGATGGAGATGCATGGGAAGGCTAAGAATTTGAAGCAAGTTGAGAAGCTATGGAAGGAAATGAAGCGCAAAAAGATAGCACCTGATAAGGTTAGCTATACAAGTATCATAAATGCTTATGTGAAGGCAGCAGAATTCGAGACATGCGAGCGATATTACCGTGAGTTTCGGATGAACGGGGGAGCCATCGACAAGGCGATAGCGGGAATCATGGTTGGCGTGTTCTCAAAGACGAGTCGGGTTGATGAACTGGTGAAGCTTCTTAGGGACATGAACTTAGAAGGAATACGCTTGGATGAGAGGCTGTATAGGTCAGCCTTGAATGCTTTGATGGATGCTGGGTTGCAAGTGCAAGCAAAATGGTTGCAAGATCATTATGCTGGAAAGTCGGGCTTTGTTTAA

mRNA sequence

ATGGCCGTCACTGGCTCTCCCGACTGGTCACTCCCCTCATCAACCTGTTTCAGAAAATCCCGTCTCCTTACTTTCATCCCTGCCTCCAATCTCGCTCTCCTTTTCTCTCTTCCAAATCTTCGATCTCTTCACCTAAATTCCTCCGGGTGCCCGTCCCCAATCCTAGAATCATCGCCCACTTCCCTCCCCGAGATCGATTCGGACTCTAATCTTCAGGATTTTCAACTTCCCTCGTCGTCCAGTGTAGAAGATTTGAACGATTTCTTATGTGGATTACCCCAAAACCCCGGACGGGAGGATTTGATCTATGAGTACTACGTGAAAGCGAAGGAGACGCCAGGGTTTAGACCTGAGAAATCAACATTGAGGCATCTCATCAGGTACTTAGTGCGATCGAAGAACTGGAATTTGATTTTGTTAGTTTCTAGAGATTTTGTGGATTATGATGTTTGCCCTGATAGAGATACTTGTTCTAGATTGGTTAGTAGTTGCGTTAGAGGTAGAAAATTTAAAGTTGTTAGGGCTCTGCTTGAGGTTTTTGAACGGGATAGGGATGTTGCTACGGCTGCATTTGAAGCTGCCATGAGAGGCTACAATAAGCTTCACATGTACAAAAGTACTATCCTGGTTTTCCAGCGCTTGAAATCTGCTAAAATTGAAGCAGATTCTGGATGTTACTGCAGGGTCATGGAAGCCTACCTTAAACTTGGGGATTCTGAGAGAATCATGGAACTGTTTAATGAAATTGAGAGTAGGATTTCTGATTTTACACCCTTTTCCACCAAAATTTATGGGATACTTTGTAAGTCATTAGCGAAATCGGGGCGAGTTTTCGAGTCGCTCGAGTTCTTTAGAGATATGAGGAAGAAAGGGATTGTAGAAGATTACACCATTTACTCTGCTTTGATATGCACTTTTGCAAGTATCCAAGAAGTTAAATTAGCTGAAGATCTTTACAATGAAGCAAAAACCAAGAAGTTATTGAGAGACCCTGCCATGTTTCAAAAGCTTATATTGATGTATATTCAACAAGGGTCATTAGAGAAAGCACTTGAGATTGTTGAAGTGATGAAGGACTTCAAAATTGGTGTATCAGATTGCATTTTCTGTGCAATTGTCAATGGCTACGCCACGAGAAGGGGCTATAATGCTGCGGTTAATGTTTACGAAAAGCTGATTAGAGACGAGTGCGAGCCAGGACAAGTGACGTACGCCTTGGCGATCAACGCTTACTGCCGTGTCGGGCTGTACTCAAAAGCGGAGGACGTGTTTGTAGAAATGGAGGAGAAGGGGTTTGACAAATGTGTAGTTGCTTACTCTAGCTTGATATCAATGTATGGGAAGACAGGGAGATTGAAGGATGCAATGAGGCTGTTAGCAAAGATGAAAGAAAGAGGGTGTCAGCCAAATGTTTGGATTTACAATATCCTGATGGAGATGCATGGGAAGGCTAAGAATTTGAAGCAAGTTGAGAAGCTATGGAAGGAAATGAAGCGCAAAAAGATAGCACCTGATAAGGTTAGCTATACAAGTATCATAAATGCTTATGTGAAGGCAGCAGAATTCGAGACATGCGAGCGATATTACCGTGAGTTTCGGATGAACGGGGGAGCCATCGACAAGGCGATAGCGGGAATCATGGTTGGCGTGTTCTCAAAGACGAGTCGGGTTGATGAACTGGTGAAGCTTCTTAGGGACATGAACTTAGAAGGAATACGCTTGGATGAGAGGCTGTATAGGTCAGCCTTGAATGCTTTGATGGATGCTGGGTTGCAAGTGCAAGCAAAATGGTTGCAAGATCATTATGCTGGAAAGTCGGGCTTTGTTTAA

Coding sequence (CDS)

ATGGCCGTCACTGGCTCTCCCGACTGGTCACTCCCCTCATCAACCTGTTTCAGAAAATCCCGTCTCCTTACTTTCATCCCTGCCTCCAATCTCGCTCTCCTTTTCTCTCTTCCAAATCTTCGATCTCTTCACCTAAATTCCTCCGGGTGCCCGTCCCCAATCCTAGAATCATCGCCCACTTCCCTCCCCGAGATCGATTCGGACTCTAATCTTCAGGATTTTCAACTTCCCTCGTCGTCCAGTGTAGAAGATTTGAACGATTTCTTATGTGGATTACCCCAAAACCCCGGACGGGAGGATTTGATCTATGAGTACTACGTGAAAGCGAAGGAGACGCCAGGGTTTAGACCTGAGAAATCAACATTGAGGCATCTCATCAGGTACTTAGTGCGATCGAAGAACTGGAATTTGATTTTGTTAGTTTCTAGAGATTTTGTGGATTATGATGTTTGCCCTGATAGAGATACTTGTTCTAGATTGGTTAGTAGTTGCGTTAGAGGTAGAAAATTTAAAGTTGTTAGGGCTCTGCTTGAGGTTTTTGAACGGGATAGGGATGTTGCTACGGCTGCATTTGAAGCTGCCATGAGAGGCTACAATAAGCTTCACATGTACAAAAGTACTATCCTGGTTTTCCAGCGCTTGAAATCTGCTAAAATTGAAGCAGATTCTGGATGTTACTGCAGGGTCATGGAAGCCTACCTTAAACTTGGGGATTCTGAGAGAATCATGGAACTGTTTAATGAAATTGAGAGTAGGATTTCTGATTTTACACCCTTTTCCACCAAAATTTATGGGATACTTTGTAAGTCATTAGCGAAATCGGGGCGAGTTTTCGAGTCGCTCGAGTTCTTTAGAGATATGAGGAAGAAAGGGATTGTAGAAGATTACACCATTTACTCTGCTTTGATATGCACTTTTGCAAGTATCCAAGAAGTTAAATTAGCTGAAGATCTTTACAATGAAGCAAAAACCAAGAAGTTATTGAGAGACCCTGCCATGTTTCAAAAGCTTATATTGATGTATATTCAACAAGGGTCATTAGAGAAAGCACTTGAGATTGTTGAAGTGATGAAGGACTTCAAAATTGGTGTATCAGATTGCATTTTCTGTGCAATTGTCAATGGCTACGCCACGAGAAGGGGCTATAATGCTGCGGTTAATGTTTACGAAAAGCTGATTAGAGACGAGTGCGAGCCAGGACAAGTGACGTACGCCTTGGCGATCAACGCTTACTGCCGTGTCGGGCTGTACTCAAAAGCGGAGGACGTGTTTGTAGAAATGGAGGAGAAGGGGTTTGACAAATGTGTAGTTGCTTACTCTAGCTTGATATCAATGTATGGGAAGACAGGGAGATTGAAGGATGCAATGAGGCTGTTAGCAAAGATGAAAGAAAGAGGGTGTCAGCCAAATGTTTGGATTTACAATATCCTGATGGAGATGCATGGGAAGGCTAAGAATTTGAAGCAAGTTGAGAAGCTATGGAAGGAAATGAAGCGCAAAAAGATAGCACCTGATAAGGTTAGCTATACAAGTATCATAAATGCTTATGTGAAGGCAGCAGAATTCGAGACATGCGAGCGATATTACCGTGAGTTTCGGATGAACGGGGGAGCCATCGACAAGGCGATAGCGGGAATCATGGTTGGCGTGTTCTCAAAGACGAGTCGGGTTGATGAACTGGTGAAGCTTCTTAGGGACATGAACTTAGAAGGAATACGCTTGGATGAGAGGCTGTATAGGTCAGCCTTGAATGCTTTGATGGATGCTGGGTTGCAAGTGCAAGCAAAATGGTTGCAAGATCATTATGCTGGAAAGTCGGGCTTTGTTTAA

Protein sequence

MAVTGSPDWSLPSSTCFRKSRLLTFIPASNLALLFSLPNLRSLHLNSSGCPSPILESSPTSLPEIDSDSNLQDFQLPSSSSVEDLNDFLCGLPQNPGREDLIYEYYVKAKETPGFRPEKSTLRHLIRYLVRSKNWNLILLVSRDFVDYDVCPDRDTCSRLVSSCVRGRKFKVVRALLEVFERDRDVATAAFEAAMRGYNKLHMYKSTILVFQRLKSAKIEADSGCYCRVMEAYLKLGDSERIMELFNEIESRISDFTPFSTKIYGILCKSLAKSGRVFESLEFFRDMRKKGIVEDYTIYSALICTFASIQEVKLAEDLYNEAKTKKLLRDPAMFQKLILMYIQQGSLEKALEIVEVMKDFKIGVSDCIFCAIVNGYATRRGYNAAVNVYEKLIRDECEPGQVTYALAINAYCRVGLYSKAEDVFVEMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKERGCQPNVWIYNILMEMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIINAYVKAAEFETCERYYREFRMNGGAIDKAIAGIMVGVFSKTSRVDELVKLLRDMNLEGIRLDERLYRSALNALMDAGLQVQAKWLQDHYAGKSGFV
Homology
[Close]
BLAST of CmoCh15G009020 vs. ExPASy Swiss-Prot
Match: Q66GP4 (Pentatricopeptide repeat-containing protein At5g13770, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g13770 PE=2 SV=1)

HSP 1 Score: 582.4 bits (1500), Expect = 5.9e-165
Identity = 298/563 (52.93%), Postives = 397/563 (70.52%), Query Frame = 0 

Query: 42  SLHLNSSGCPSPILESSPTSLPEIDSDSNLQDFQLPSSSSVEDLNDFLCGLPQNPGREDL 101
           + H+ SS C S +LE      P    D     F  P  +   DLN  L    ++P    L
Sbjct: 37  NFHVCSSRC-SMVLEEDEKKSPSPKEDK--WPFFEPGPN---DLNRVLSRFLRDPETRKL 96

Query: 102 IYEYYVKAKETPGFRPEKSTLRHLIRYLVRSKNWNLILLVSRDFVDYDVCPDRDTCSRLV 161
             E+Y KAKE    R    T +HLI YLV SK+W+L++ V  D  ++   PD  TCS L+
Sbjct: 97  SSEFYEKAKENSELR----TTKHLISYLVSSKSWDLLVSVCEDLREHKALPDGQTCSNLI 156

Query: 162 SSCVRGRKFKVVRALLEVFERDRDVATAAFEAAMRGYNKLHMYKSTILVFQRLK-SAKIE 221
            SC+R RKF++   LL VF  D+ +A +A +AAM+G+NKL MY STI VF RLK S  +E
Sbjct: 157 RSCIRDRKFRITHCLLSVFRSDKSLAVSASDAAMKGFNKLQMYSSTIQVFDRLKQSVGVE 216

Query: 222 ADSGCYCRVMEAYLKLGDSERIMELFNEIES-RISDFTPFSTKIYGILCKSLAKSGRVFE 281
              GCYCR+MEA+ K+G++ +++ELF E +S R+S     S  IY I+C SLAKSGR FE
Sbjct: 217 PSPGCYCRIMEAHEKIGENHKVVELFQEFKSQRLSFLAKESGSIYTIVCSSLAKSGRAFE 276

Query: 282 SLEFFRDMRKKGIVEDYTIYSALICTFASIQEVKLAEDLYNEAKTKKLLRDPAMFQKLIL 341
           +LE   +M+ KGI E   +YS LI  FA  +EV + E L+ EA  KKLL+DP M  K++L
Sbjct: 277 ALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLKVVL 336

Query: 342 MYIQQGSLEKALEIVEVMKDFKIGVSDCIFCAIVNGYATRRGYNAAVNVYEKLIRDECEP 401
           MY+++G++E  LE+V  M+  ++ V+DCI CAIVNG++ +RG+  AV VYE  +++ECE 
Sbjct: 337 MYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECEA 396

Query: 402 GQVTYALAINAYCRVGLYSKAEDVFVEMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLL 461
           GQVTYA+AINAYCR+  Y+KAE +F EM +KGFDKCVVAYS+++ MYGKT RL DA+RL+
Sbjct: 397 GQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLM 456

Query: 462 AKMKERGCQPNVWIYNILMEMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIINAYVKA 521
           AKMK+RGC+PN+WIYN L++MHG+A +L++ EK+WKEMKR K+ PDKVSYTS+I+AY ++
Sbjct: 457 AKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRS 516

Query: 522 AEFETCERYYREFRMNGGAIDKAIAGIMVGVFSKTSRVDELVKLLRDMNLEGIRLDERLY 581
            E E C   Y+EFRMN G ID+A+AGIMVGVFSKTSR+DEL++LL+DM +EG RLD RLY
Sbjct: 517 KELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQDMKVEGTRLDARLY 576

Query: 582 RSALNALMDAGLQVQAKWLQDHY 603
            SALNAL DAGL  Q +WLQ+ +
Sbjct: 577 SSALNALRDAGLNSQIRWLQESF 589

[Close]
BLAST of CmoCh15G009020 vs. ExPASy Swiss-Prot
Match: Q8L844 (Pentatricopeptide repeat-containing protein At5g42310, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRP1 PE=1 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 1.8e-33
Identity = 105/448 (23.44%), Postives = 202/448 (45.09%), Query Frame = 0 

Query: 144 DFVDYDVCPDRDTCSRLVSSCVRGRKFKVVRALLEVFERDR-DVATAAFEAAMRGYNKLH 203
           DFV+Y +     T S  + S +  R +K +       ERD+ ++        + G+ K  
Sbjct: 231 DFVNYSLVIQSLTRSNKIDSVMLLRLYKEI-------ERDKLELDVQLVNDIIMGFAKSG 290

Query: 204 MYKSTILVFQRLKSAKIEADSGCYCRVMEAYLKLGDSERIME---LFNEIESRISDFTPF 263
                + +    ++  + A +     ++ A   L DS R +E   LF E+  R S   P 
Sbjct: 291 DPSKALQLLGMAQATGLSAKTATLVSIISA---LADSGRTLEAEALFEEL--RQSGIKP- 350

Query: 264 STKIYGILCKSLAKSGRVFESLEFFRDMRKKGIVEDYTIYSALICTFASIQEVKLAEDLY 323
            T+ Y  L K   K+G + ++     +M K+G+  D   YS LI  + +    + A  + 
Sbjct: 351 RTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVL 410

Query: 324 NEAKTKKLLRDPAMFQKLILMYIQQGSLEKALEIVEVMKDFKIGVSDCIFCAIVNGYATR 383
            E +   +  +  +F +L+  +  +G  +K  ++++ MK   +      +  +++ +   
Sbjct: 411 KEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKF 470

Query: 384 RGYNAAVNVYEKLIRDECEPGQVTYALAINAYCRVGLYSKAEDVFVEMEEKGFDKCVVAY 443
              + A+  +++++ +  EP +VT+   I+ +C+ G +  AE++F  ME +G   C   Y
Sbjct: 471 NCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTY 530

Query: 444 SSLISMYGKTGRLKDAMRLLAKMKERGCQPNVWIYNILMEMHGKAKNLKQVEKLWKEMKR 503
           + +I+ YG   R  D  RLL KMK +G  PNV  +  L++++GK+       +  +EMK 
Sbjct: 531 NIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKS 590

Query: 504 KKIAPDKVSYTSIINAYVKAAEFETCERYYREFRMNGGAIDKAIAGIMVGVFSKTSRVDE 563
             + P    Y ++INAY +    E     +R    +G          ++  F +  R  E
Sbjct: 591 VGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAE 650

Query: 564 LVKLLRDMNLEGIRLDERLYRSALNALM 588
              +L+ M   G++ D   Y + + AL+
Sbjct: 651 AFAVLQYMKENGVKPDVVTYTTLMKALI 665

[Close]
BLAST of CmoCh15G009020 vs. ExPASy Swiss-Prot
Match: Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 4.1e-33
Identity = 100/474 (21.10%), Postives = 205/474 (43.25%), Query Frame = 0 

Query: 114 GFRPEKSTLRHLIRYLVRSKNWNLILLVSRDFVDYDVCPDRDTCSRLVSSCVRGRKFKVV 173
           G +P+      ++  LV   +  L+ +       + + PD  T + L+ +  R  + +  
Sbjct: 149 GLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPA 208

Query: 174 RALLEVFERDRDVA-TAAFEAAMRGYNKLHMYKSTILVFQRLKSAKIEADSGCYCRVMEA 233
             +LE       V     F   M+GY +       + + +++        +     ++  
Sbjct: 209 ILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHG 268

Query: 234 YLKLGDSERIMELFNEIESRISDFTPFSTKIYGILCKSLAKSGRVFESLEFFRDMRKKGI 293
           + K G  E  +    E+ ++   F    T  +  L   L K+G V  ++E    M ++G 
Sbjct: 269 FCKEGRVEDALNFIQEMSNQDGFFPDQYT--FNTLVNGLCKAGHVKHAIEIMDVMLQEGY 328

Query: 294 VEDYTIYSALICTFASIQEVKLAEDLYNEAKTKKLLRDPAMFQKLILMYIQQGSLEKALE 353
             D   Y+++I     + EVK A ++ ++  T+    +   +  LI    ++  +E+A E
Sbjct: 329 DPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATE 388

Query: 354 IVEVMKDFKIGVSDCIFCAIVNGYATRRGYNAAVNVYEKLIRDECEPGQVTYALAINAYC 413
           +  V+    I    C F +++ G    R +  A+ ++E++    CEP + TY + I++ C
Sbjct: 389 LARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLC 448

Query: 414 RVGLYSKAEDVFVEMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKERGCQPNVW 473
             G   +A ++  +ME  G  + V+ Y++LI  + K  + ++A  +  +M+  G   N  
Sbjct: 449 SKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSV 508

Query: 474 IYNILMEMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIINAYVKAAEFETCERYYREF 533
            YN L++   K++ ++   +L  +M  +   PDK +Y S++  + +  + +      +  
Sbjct: 509 TYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAM 568

Query: 534 RMNGGAIDKAIAGIMVGVFSKTSRVDELVKLLRDMNLEGIRLDERLYRSALNAL 587
             NG   D    G ++    K  RV+   KLLR + ++GI L    Y   +  L
Sbjct: 569 TSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGL 620

[Close]
BLAST of CmoCh15G009020 vs. ExPASy Swiss-Prot
Match: Q6NQ83 (Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22470 PE=1 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 1.6e-32
Identity = 113/498 (22.69%), Postives = 206/498 (41.37%), Query Frame = 0 

Query: 89  LCGLPQNPGREDLIYEYYVKAKETPGFRPEKSTLRHLIRYLVRSKNWNLILLVSRDFVDY 148
           LC       + DL+   + K  E  G   +  T+  +I    R K       V       
Sbjct: 76  LCSAVARTKQYDLVLG-FCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKL 135

Query: 149 DVCPDRDTCSRLVSS-CVRGRKFKVVRALLEVFERDRDVATAAFEAAMRGYNKLHMYKST 208
              PD  T S LV+  C+ GR  + V  +  + E  +          + G          
Sbjct: 136 GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEA 195

Query: 209 ILVFQRLKSAKIEADSGCYCRVMEAYLKLGDSERIMELFNEIESRISDFTPFSTKIYGIL 268
           +++  R+     + D   Y  V+    K G+S   ++LF ++E R       S   Y I+
Sbjct: 196 LVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEER---NIKASVVQYSIV 255

Query: 269 CKSLAKSGRVFESLEFFRDMRKKGIVEDYTIYSALICTFASIQEVKLAEDLYNEAKTKKL 328
             SL K G   ++L  F +M  KGI  D   YS+LI    +  +      +  E   + +
Sbjct: 256 IDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNI 315

Query: 329 LRDPAMFQKLILMYIQQGSLEKALEIVEVMKDFKIGVSDCIFCAIVNGYATRRGYNAAVN 388
           + D   F  LI +++++G L +A E+   M    I      + ++++G+      + A  
Sbjct: 316 IPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQ 375

Query: 389 VYEKLIRDECEPGQVTYALAINAYCRVGLYSKAEDVFVEMEEKGFDKCVVAYSSLISMYG 448
           +++ ++   CEP  VTY++ IN+YC+         +F E+  KG     + Y++L+  + 
Sbjct: 376 MFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFC 435

Query: 449 KTGRLKDAMRLLAKMKERGCQPNVWIYNILMEMHGKAKNLKQVEKLWKEMKRKKIAPDKV 508
           ++G+L  A  L  +M  RG  P+V  Y IL++       L +  +++++M++ ++     
Sbjct: 436 QSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIG 495

Query: 509 SYTSIINAYVKAAEFETCERYYREFRMNGGAIDKAIAGIMVGVFSKTSRVDELVKLLRDM 568
            Y  II+    A++ +     +      G   D     +M+G   K   + E   L R M
Sbjct: 496 IYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKM 555

Query: 569 NLEGIRLDERLYRSALNA 586
             +G   D+  Y   + A
Sbjct: 556 KEDGCTPDDFTYNILIRA 569

[Close]
BLAST of CmoCh15G009020 vs. ExPASy Swiss-Prot
Match: O82178 (Pentatricopeptide repeat-containing protein At2g35130 OS=Arabidopsis thaliana OX=3702 GN=At2g35130 PE=3 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 1.0e-31
Identity = 96/415 (23.13%), Postives = 190/415 (45.78%), Query Frame = 0 

Query: 191 FEAAMRGYNKLHMYKSTILVFQRLKSAKIEADSGCYCRVMEAYLKLGDSERIMELFNEIE 250
           F   +  Y +   YK    ++ +L  ++       Y  +++AY   G  ER   +  E++
Sbjct: 158 FNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQ 217

Query: 251 SRISDFTPFSTKIYGILCKSLAK-SGRVFESLEFFRDMRKKGIVEDYTIYSALICTFASI 310
           +           +Y    + L K  G   E+++ F+ M++         Y+ +I  +   
Sbjct: 218 NHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKA 277

Query: 311 QEVKLAEDLYNEAKTKKLLRDPAMFQKLILMYIQQGSLEKALEIVEVMKDFKIGVSDCIF 370
            +  ++  LY E ++ +   +   +  L+  + ++G  EKA EI E +++  +     ++
Sbjct: 278 SKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVY 337

Query: 371 CAIVNGYATRRGY-NAAVNVYEKLIRDECEPGQVTYALAINAYCRVGLYSKAEDVFVEME 430
            A++  Y +R GY   A  ++  +    CEP + +Y + ++AY R GL+S AE VF EM+
Sbjct: 338 NALMESY-SRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMK 397

Query: 431 -----------------------------------EKGFDKCVVAYSSLISMYGKTGRLK 490
                                              E G +      +S++++YG+ G+  
Sbjct: 398 RLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFT 457

Query: 491 DAMRLLAKMKERGCQPNVWIYNILMEMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSII 550
              ++LA+M+   C  ++  YNIL+ ++GKA  L+++E+L+ E+K K   PD V++TS I
Sbjct: 458 KMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRI 517

Query: 551 NAYVKAAEFETCERYYREFRMNGGAIDKAIAGIMVGVFSKTSRVDELVKLLRDMN 569
            AY +   +  C   + E   +G A D   A +++   S   +V+++  +LR M+
Sbjct: 518 GAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMH 571

[Close]
BLAST of CmoCh15G009020 vs. ExPASy TrEMBL
Match: A0A6J1FDV4 (pentatricopeptide repeat-containing protein At5g13770, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111444845 PE=4 SV=1)

HSP 1 Score: 1210.7 bits (3131), Expect = 0.0e+00
Identity = 609/609 (100.00%), Postives = 609/609 (100.00%), Query Frame = 0 

Query: 1   MAVTGSPDWSLPSSTCFRKSRLLTFIPASNLALLFSLPNLRSLHLNSSGCPSPILESSPT 60
           MAVTGSPDWSLPSSTCFRKSRLLTFIPASNLALLFSLPNLRSLHLNSSGCPSPILESSPT
Sbjct: 1   MAVTGSPDWSLPSSTCFRKSRLLTFIPASNLALLFSLPNLRSLHLNSSGCPSPILESSPT 60

Query: 61  SLPEIDSDSNLQDFQLPSSSSVEDLNDFLCGLPQNPGREDLIYEYYVKAKETPGFRPEKS 120
           SLPEIDSDSNLQDFQLPSSSSVEDLNDFLCGLPQNPGREDLIYEYYVKAKETPGFRPEKS
Sbjct: 61  SLPEIDSDSNLQDFQLPSSSSVEDLNDFLCGLPQNPGREDLIYEYYVKAKETPGFRPEKS 120

Query: 121 TLRHLIRYLVRSKNWNLILLVSRDFVDYDVCPDRDTCSRLVSSCVRGRKFKVVRALLEVF 180
           TLRHLIRYLVRSKNWNLILLVSRDFVDYDVCPDRDTCSRLVSSCVRGRKFKVVRALLEVF
Sbjct: 121 TLRHLIRYLVRSKNWNLILLVSRDFVDYDVCPDRDTCSRLVSSCVRGRKFKVVRALLEVF 180

Query: 181 ERDRDVATAAFEAAMRGYNKLHMYKSTILVFQRLKSAKIEADSGCYCRVMEAYLKLGDSE 240
           ERDRDVATAAFEAAMRGYNKLHMYKSTILVFQRLKSAKIEADSGCYCRVMEAYLKLGDSE
Sbjct: 181 ERDRDVATAAFEAAMRGYNKLHMYKSTILVFQRLKSAKIEADSGCYCRVMEAYLKLGDSE 240

Query: 241 RIMELFNEIESRISDFTPFSTKIYGILCKSLAKSGRVFESLEFFRDMRKKGIVEDYTIYS 300
           RIMELFNEIESRISDFTPFSTKIYGILCKSLAKSGRVFESLEFFRDMRKKGIVEDYTIYS
Sbjct: 241 RIMELFNEIESRISDFTPFSTKIYGILCKSLAKSGRVFESLEFFRDMRKKGIVEDYTIYS 300

Query: 301 ALICTFASIQEVKLAEDLYNEAKTKKLLRDPAMFQKLILMYIQQGSLEKALEIVEVMKDF 360
           ALICTFASIQEVKLAEDLYNEAKTKKLLRDPAMFQKLILMYIQQGSLEKALEIVEVMKDF
Sbjct: 301 ALICTFASIQEVKLAEDLYNEAKTKKLLRDPAMFQKLILMYIQQGSLEKALEIVEVMKDF 360

Query: 361 KIGVSDCIFCAIVNGYATRRGYNAAVNVYEKLIRDECEPGQVTYALAINAYCRVGLYSKA 420
           KIGVSDCIFCAIVNGYATRRGYNAAVNVYEKLIRDECEPGQVTYALAINAYCRVGLYSKA
Sbjct: 361 KIGVSDCIFCAIVNGYATRRGYNAAVNVYEKLIRDECEPGQVTYALAINAYCRVGLYSKA 420

Query: 421 EDVFVEMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKERGCQPNVWIYNILMEM 480
           EDVFVEMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKERGCQPNVWIYNILMEM
Sbjct: 421 EDVFVEMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKERGCQPNVWIYNILMEM 480

Query: 481 HGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIINAYVKAAEFETCERYYREFRMNGGAID 540
           HGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIINAYVKAAEFETCERYYREFRMNGGAID
Sbjct: 481 HGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIINAYVKAAEFETCERYYREFRMNGGAID 540

Query: 541 KAIAGIMVGVFSKTSRVDELVKLLRDMNLEGIRLDERLYRSALNALMDAGLQVQAKWLQD 600
           KAIAGIMVGVFSKTSRVDELVKLLRDMNLEGIRLDERLYRSALNALMDAGLQVQAKWLQD
Sbjct: 541 KAIAGIMVGVFSKTSRVDELVKLLRDMNLEGIRLDERLYRSALNALMDAGLQVQAKWLQD 600

Query: 601 HYAGKSGFV 610
           HYAGKSGFV
Sbjct: 601 HYAGKSGFV 609

[Close]
BLAST of CmoCh15G009020 vs. ExPASy TrEMBL
Match: A0A6J1JWB4 (pentatricopeptide repeat-containing protein At5g13770, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489451 PE=4 SV=1)

HSP 1 Score: 1196.4 bits (3094), Expect = 0.0e+00
Identity = 600/609 (98.52%), Postives = 604/609 (99.18%), Query Frame = 0 

Query: 1   MAVTGSPDWSLPSSTCFRKSRLLTFIPASNLALLFSLPNLRSLHLNSSGCPSPILESSPT 60
           MAVTGSPDWSLPSSTCFRKSRL+TFIPASNLALLFSLPNLRSLHLNSSGCPSPILESSPT
Sbjct: 1   MAVTGSPDWSLPSSTCFRKSRLITFIPASNLALLFSLPNLRSLHLNSSGCPSPILESSPT 60

Query: 61  SLPEIDSDSNLQDFQLPSSSSVEDLNDFLCGLPQNPGREDLIYEYYVKAKETPGFRPEKS 120
           SLPEIDSDSNLQDFQLPSSSSVEDLNDFLCGLPQNPGREDLIYEYYVKAKETPGFRPEKS
Sbjct: 61  SLPEIDSDSNLQDFQLPSSSSVEDLNDFLCGLPQNPGREDLIYEYYVKAKETPGFRPEKS 120

Query: 121 TLRHLIRYLVRSKNWNLILLVSRDFVDYDVCPDRDTCSRLVSSCVRGRKFKVVRALLEVF 180
           TLRHLIRYLVR K W+LILLVSRDFVDYDVCPDRDTCSRLVSSCVRGRKFKVVRALLEVF
Sbjct: 121 TLRHLIRYLVRLKKWSLILLVSRDFVDYDVCPDRDTCSRLVSSCVRGRKFKVVRALLEVF 180

Query: 181 ERDRDVATAAFEAAMRGYNKLHMYKSTILVFQRLKSAKIEADSGCYCRVMEAYLKLGDSE 240
           ERDRDVATAAFEAAMRGYNKLHMY+STILVFQRLKSAKIEADSGCYCRVMEAYLKLGDSE
Sbjct: 181 ERDRDVATAAFEAAMRGYNKLHMYRSTILVFQRLKSAKIEADSGCYCRVMEAYLKLGDSE 240

Query: 241 RIMELFNEIESRISDFTPFSTKIYGILCKSLAKSGRVFESLEFFRDMRKKGIVEDYTIYS 300
           RIMELFNEIESRISDFTPFSTKIYGILCKSLAKSGRVFESLEFFRDMRKKGIVEDYTIYS
Sbjct: 241 RIMELFNEIESRISDFTPFSTKIYGILCKSLAKSGRVFESLEFFRDMRKKGIVEDYTIYS 300

Query: 301 ALICTFASIQEVKLAEDLYNEAKTKKLLRDPAMFQKLILMYIQQGSLEKALEIVEVMKDF 360
           ALICTFASIQEVKLAEDLYNEAKTKKLLRDPA FQKLILMYIQQGSLEKALEIVEVMKDF
Sbjct: 301 ALICTFASIQEVKLAEDLYNEAKTKKLLRDPATFQKLILMYIQQGSLEKALEIVEVMKDF 360

Query: 361 KIGVSDCIFCAIVNGYATRRGYNAAVNVYEKLIRDECEPGQVTYALAINAYCRVGLYSKA 420
           KIG SDCIFCAIVNGYATRRGYNAAVN+YEKLIRDECEPGQVTYALAINAYCRVGLYSKA
Sbjct: 361 KIGASDCIFCAIVNGYATRRGYNAAVNIYEKLIRDECEPGQVTYALAINAYCRVGLYSKA 420

Query: 421 EDVFVEMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKERGCQPNVWIYNILMEM 480
           EDVFVEMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKERGCQPNVWIYNILMEM
Sbjct: 421 EDVFVEMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKERGCQPNVWIYNILMEM 480

Query: 481 HGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIINAYVKAAEFETCERYYREFRMNGGAID 540
           HGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIINAYVKAAEFETCERYYREFRMNGG ID
Sbjct: 481 HGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIINAYVKAAEFETCERYYREFRMNGGTID 540

Query: 541 KAIAGIMVGVFSKTSRVDELVKLLRDMNLEGIRLDERLYRSALNALMDAGLQVQAKWLQD 600
           KAIAGIMVGVFSKTSRVDELVKLLRDMNLEGIRLDERLYRSALNALMDAGLQVQAKWLQD
Sbjct: 541 KAIAGIMVGVFSKTSRVDELVKLLRDMNLEGIRLDERLYRSALNALMDAGLQVQAKWLQD 600

Query: 601 HYAGKSGFV 610
           HYAGKSGFV
Sbjct: 601 HYAGKSGFV 609

[Close]
BLAST of CmoCh15G009020 vs. ExPASy TrEMBL
Match: A0A1S3CPF0 (pentatricopeptide repeat-containing protein At5g13770, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103503127 PE=4 SV=1)

HSP 1 Score: 1058.1 bits (2735), Expect = 1.4e-305
Identity = 538/611 (88.05%), Postives = 560/611 (91.65%), Query Frame = 0 

Query: 1   MAVTGSPDWSLPSSTCFRKSRLLTFIPASNLALLFSLP--NLRSLHLNSSGCPSPILESS 60
           MAV+ SPD S P S  FRKS    FIP SN  LLFSLP  NL SLHLNSSG PSPILE  
Sbjct: 1   MAVSPSPDCSFPPSNSFRKSH---FIPTSNFPLLFSLPTSNLPSLHLNSSGFPSPILEQP 60

Query: 61  PTSLPEIDSDSNLQDFQLPSSSSVEDLNDFLCGLPQNPGREDLIYEYYVKAKETPGFRPE 120
             +LP+I S+SNL DFQLP  S+VEDLNDFLCGL QNPG EDLIY+YYVKAKE  GFRPE
Sbjct: 61  SIALPDIHSNSNLHDFQLPPLSNVEDLNDFLCGLSQNPGTEDLIYDYYVKAKERAGFRPE 120

Query: 121 KSTLRHLIRYLVRSKNWNLILLVSRDFVDYDVCPDRDTCSRLVSSCVRGRKFKVVRALLE 180
           KSTLRHLIRYLVR K W+LI LVSRDFVD+ VCPDRDTCS+LVSSCVRGRKFKVV+ALLE
Sbjct: 121 KSTLRHLIRYLVRLKKWDLIFLVSRDFVDFGVCPDRDTCSKLVSSCVRGRKFKVVKALLE 180

Query: 181 VFERDRDVATAAFEAAMRGYNKLHMYKSTILVFQRLKSAKIEADSGCYCRVMEAYLKLGD 240
           VFERD DVA  AFEAAMRGYNKLHMYKSTI+VFQRLKSA+IEADSGCY RVMEAYLKLGD
Sbjct: 181 VFERDSDVAMTAFEAAMRGYNKLHMYKSTIMVFQRLKSARIEADSGCYFRVMEAYLKLGD 240

Query: 241 SERIMELFNEIESRISDFTPFSTKIYGILCKSLAKSGRVFESLEFFRDMRKKGIVEDYTI 300
           SER+MELFNE+ESRIS+ TPFSTKIYGILC+SLAKSGRVFESLEFFRDMRKKGI EDYTI
Sbjct: 241 SERVMELFNEVESRISNLTPFSTKIYGILCESLAKSGRVFESLEFFRDMRKKGIAEDYTI 300

Query: 301 YSALICTFASIQEVKLAEDLYNEAKTKKLLRDPAMFQKLILMYIQQGSLEKALEIVEVMK 360
           YSALICTFASI+EVKLAEDLYNEAK KKLLRDPAMF KLILMYIQQGSLEKALEIVEVMK
Sbjct: 301 YSALICTFASIREVKLAEDLYNEAKAKKLLRDPAMFLKLILMYIQQGSLEKALEIVEVMK 360

Query: 361 DFKIGVSDCIFCAIVNGYATRRGYNAAVNVYEKLIRDECEPGQVTYALAINAYCRVGLYS 420
           DFKIGVSDCIFCAIVNGYATRRGY+AAV VYEKLI D CEPGQVTYA AINAYCRVGLYS
Sbjct: 361 DFKIGVSDCIFCAIVNGYATRRGYDAAVKVYEKLIGDGCEPGQVTYASAINAYCRVGLYS 420

Query: 421 KAEDVFVEMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKERGCQPNVWIYNILM 480
           KAED+F EMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKE+GCQPNVWIYNILM
Sbjct: 421 KAEDIFGEMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKEKGCQPNVWIYNILM 480

Query: 481 EMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIINAYVKAAEFETCERYYREFRMNGGA 540
           EMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIINAYVKA+EFE CE+YYREFRMNGG 
Sbjct: 481 EMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIINAYVKASEFEKCEQYYREFRMNGGT 540

Query: 541 IDKAIAGIMVGVFSKTSRVDELVKLLRDMNLEGIRLDERLYRSALNALMDAGLQVQAKWL 600
           IDKAI GIMVGVFSKTSRVDELVKLLRDM LEG RLDERLYRSALNALMDAGLQVQAKWL
Sbjct: 541 IDKAIGGIMVGVFSKTSRVDELVKLLRDMKLEGTRLDERLYRSALNALMDAGLQVQAKWL 600

Query: 601 QDHYAGKSGFV 610
           QDHYAGKSGFV
Sbjct: 601 QDHYAGKSGFV 608

[Close]
BLAST of CmoCh15G009020 vs. ExPASy TrEMBL
Match: A0A5A7VR01 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold174G00670 PE=4 SV=1)

HSP 1 Score: 1053.5 bits (2723), Expect = 3.3e-304
Identity = 536/611 (87.73%), Postives = 558/611 (91.33%), Query Frame = 0 

Query: 1   MAVTGSPDWSLPSSTCFRKSRLLTFIPASNLALLFSL--PNLRSLHLNSSGCPSPILESS 60
           MAV+ SPD S P S  FRKS    FIP SN  LLFSL   NL SLHLNSSG PSPILE  
Sbjct: 1   MAVSPSPDCSFPPSNSFRKSH---FIPTSNFPLLFSLSTSNLPSLHLNSSGFPSPILEQP 60

Query: 61  PTSLPEIDSDSNLQDFQLPSSSSVEDLNDFLCGLPQNPGREDLIYEYYVKAKETPGFRPE 120
             +LP+I S+SNL DFQLP  S+VEDLNDFLCGL QNPG EDLIY+YYVKAKE  GFRPE
Sbjct: 61  SIALPDIHSNSNLHDFQLPPLSNVEDLNDFLCGLSQNPGTEDLIYDYYVKAKERAGFRPE 120

Query: 121 KSTLRHLIRYLVRSKNWNLILLVSRDFVDYDVCPDRDTCSRLVSSCVRGRKFKVVRALLE 180
           KSTLRHLIRYLVR K W+LI LVSRDFVD+ VCPDRDTCS+LVSSCVRGRKFKVV+ALLE
Sbjct: 121 KSTLRHLIRYLVRLKKWDLIFLVSRDFVDFGVCPDRDTCSKLVSSCVRGRKFKVVKALLE 180

Query: 181 VFERDRDVATAAFEAAMRGYNKLHMYKSTILVFQRLKSAKIEADSGCYCRVMEAYLKLGD 240
           VFERD DVA   FEAAMRGYNKLHMYKSTI+VFQRLKSA+IEADSGCY RVMEAYLKLGD
Sbjct: 181 VFERDSDVALTTFEAAMRGYNKLHMYKSTIMVFQRLKSARIEADSGCYFRVMEAYLKLGD 240

Query: 241 SERIMELFNEIESRISDFTPFSTKIYGILCKSLAKSGRVFESLEFFRDMRKKGIVEDYTI 300
           SER+MELFNE+ESRIS+ TPFSTKIYGILC+SLAKSGRVFESLEFFRDMRKKGI EDYTI
Sbjct: 241 SERVMELFNEVESRISNLTPFSTKIYGILCESLAKSGRVFESLEFFRDMRKKGIAEDYTI 300

Query: 301 YSALICTFASIQEVKLAEDLYNEAKTKKLLRDPAMFQKLILMYIQQGSLEKALEIVEVMK 360
           YSALICTFASI+EVKLAEDLYNEAK KKLLRDPAMF KLILMYIQQGSLEKALEIVEVMK
Sbjct: 301 YSALICTFASIREVKLAEDLYNEAKAKKLLRDPAMFLKLILMYIQQGSLEKALEIVEVMK 360

Query: 361 DFKIGVSDCIFCAIVNGYATRRGYNAAVNVYEKLIRDECEPGQVTYALAINAYCRVGLYS 420
           DFKIGVSDCIFCAIVNGYATRRGY+AAV VYEKLI D CEPGQVTYA AINAYCRVGLYS
Sbjct: 361 DFKIGVSDCIFCAIVNGYATRRGYDAAVKVYEKLIGDGCEPGQVTYASAINAYCRVGLYS 420

Query: 421 KAEDVFVEMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKERGCQPNVWIYNILM 480
           KAED+F EMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKE+GCQPNVWIYNILM
Sbjct: 421 KAEDIFGEMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKEKGCQPNVWIYNILM 480

Query: 481 EMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIINAYVKAAEFETCERYYREFRMNGGA 540
           EMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIINAYVKA+EFE CE+YYREFRMNGG 
Sbjct: 481 EMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIINAYVKASEFEKCEQYYREFRMNGGT 540

Query: 541 IDKAIAGIMVGVFSKTSRVDELVKLLRDMNLEGIRLDERLYRSALNALMDAGLQVQAKWL 600
           IDKAI GIMVGVFSKTSRVDELVKLLRDM LEG RLDERLYRSALNALMDAGLQVQAKWL
Sbjct: 541 IDKAIGGIMVGVFSKTSRVDELVKLLRDMKLEGTRLDERLYRSALNALMDAGLQVQAKWL 600

Query: 601 QDHYAGKSGFV 610
           QDHYAGKSGFV
Sbjct: 601 QDHYAGKSGFV 608

[Close]
BLAST of CmoCh15G009020 vs. ExPASy TrEMBL
Match: A0A0A0KPV8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G114580 PE=4 SV=1)

HSP 1 Score: 1053.5 bits (2723), Expect = 3.3e-304
Identity = 532/611 (87.07%), Postives = 560/611 (91.65%), Query Frame = 0 

Query: 1   MAVTGSPDWSLPSSTCFRKSRLLTFIPASNLALLFSLP--NLRSLHLNSSGCPSPILESS 60
           MA++ SPD S P S  FRKS    FI  SN +LLFSLP  NL SLHLNSSGCPSPILE  
Sbjct: 1   MALSPSPDCSFPPSNSFRKSH---FISTSNFSLLFSLPTSNLPSLHLNSSGCPSPILEQP 60

Query: 61  PTSLPEIDSDSNLQDFQLPSSSSVEDLNDFLCGLPQNPGREDLIYEYYVKAKETPGFRPE 120
             +LP+I S+SNL DFQLPS  +V+DLNDFLCGL QNPG EDLIY+YYVKAKET GFRP+
Sbjct: 61  SIALPDIHSNSNLHDFQLPSLPNVQDLNDFLCGLSQNPGTEDLIYDYYVKAKETAGFRPQ 120

Query: 121 KSTLRHLIRYLVRSKNWNLILLVSRDFVDYDVCPDRDTCSRLVSSCVRGRKFKVVRALLE 180
           KSTLRHLIRYLVR K W+LILLVSRDFVD+ VCPDRDTCS+LVSSCVRGRKFKVV++LLE
Sbjct: 121 KSTLRHLIRYLVRLKKWDLILLVSRDFVDFGVCPDRDTCSKLVSSCVRGRKFKVVKSLLE 180

Query: 181 VFERDRDVATAAFEAAMRGYNKLHMYKSTILVFQRLKSAKIEADSGCYCRVMEAYLKLGD 240
           VFERD  VA  AFEAAMRGYNKLHM+KSTI+VFQRLKSA+IEADSGCYCRVMEAYLKLGD
Sbjct: 181 VFERDSGVAMTAFEAAMRGYNKLHMHKSTIMVFQRLKSARIEADSGCYCRVMEAYLKLGD 240

Query: 241 SERIMELFNEIESRISDFTPFSTKIYGILCKSLAKSGRVFESLEFFRDMRKKGIVEDYTI 300
           SER+MELFNE+ESRIS  TPFSTKIYGILC+SLAKSGRVFESLEFFRDMRKKGI EDYTI
Sbjct: 241 SERVMELFNEVESRISVSTPFSTKIYGILCESLAKSGRVFESLEFFRDMRKKGIAEDYTI 300

Query: 301 YSALICTFASIQEVKLAEDLYNEAKTKKLLRDPAMFQKLILMYIQQGSLEKALEIVEVMK 360
           YSALICTFASIQEVKLAEDLYNEAK KKLLRDPAMF KLILMY+QQGSLEKALEIVEVMK
Sbjct: 301 YSALICTFASIQEVKLAEDLYNEAKAKKLLRDPAMFLKLILMYVQQGSLEKALEIVEVMK 360

Query: 361 DFKIGVSDCIFCAIVNGYATRRGYNAAVNVYEKLIRDECEPGQVTYALAINAYCRVGLYS 420
           DFKIGVSDCIFCAIVNGYATRRGY AAV VYEKLI D CEPGQVTYA AINAYCRVGLYS
Sbjct: 361 DFKIGVSDCIFCAIVNGYATRRGYEAAVKVYEKLIEDGCEPGQVTYASAINAYCRVGLYS 420

Query: 421 KAEDVFVEMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKERGCQPNVWIYNILM 480
           KAED+F EMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKE+GCQPNVWIYNILM
Sbjct: 421 KAEDIFGEMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKEKGCQPNVWIYNILM 480

Query: 481 EMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIINAYVKAAEFETCERYYREFRMNGGA 540
           EMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSII+AYVKA+EFE CE+YYREFRMNGG 
Sbjct: 481 EMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIISAYVKASEFEKCEQYYREFRMNGGT 540

Query: 541 IDKAIAGIMVGVFSKTSRVDELVKLLRDMNLEGIRLDERLYRSALNALMDAGLQVQAKWL 600
           IDKA  GIMVGVFSKTSRVDELVKLLRDM LEG RLDERLYR+ALNALMDAGLQVQAKWL
Sbjct: 541 IDKAFGGIMVGVFSKTSRVDELVKLLRDMKLEGTRLDERLYRTALNALMDAGLQVQAKWL 600

Query: 601 QDHYAGKSGFV 610
           QDHYAGKSGFV
Sbjct: 601 QDHYAGKSGFV 608

[Close]
BLAST of CmoCh15G009020 vs. NCBI nr
Match: XP_022938691.1 (pentatricopeptide repeat-containing protein At5g13770, chloroplastic [Cucurbita moschata])

HSP 1 Score: 1210.7 bits (3131), Expect = 0.0e+00
Identity = 609/609 (100.00%), Postives = 609/609 (100.00%), Query Frame = 0 

Query: 1   MAVTGSPDWSLPSSTCFRKSRLLTFIPASNLALLFSLPNLRSLHLNSSGCPSPILESSPT 60
           MAVTGSPDWSLPSSTCFRKSRLLTFIPASNLALLFSLPNLRSLHLNSSGCPSPILESSPT
Sbjct: 1   MAVTGSPDWSLPSSTCFRKSRLLTFIPASNLALLFSLPNLRSLHLNSSGCPSPILESSPT 60

Query: 61  SLPEIDSDSNLQDFQLPSSSSVEDLNDFLCGLPQNPGREDLIYEYYVKAKETPGFRPEKS 120
           SLPEIDSDSNLQDFQLPSSSSVEDLNDFLCGLPQNPGREDLIYEYYVKAKETPGFRPEKS
Sbjct: 61  SLPEIDSDSNLQDFQLPSSSSVEDLNDFLCGLPQNPGREDLIYEYYVKAKETPGFRPEKS 120

Query: 121 TLRHLIRYLVRSKNWNLILLVSRDFVDYDVCPDRDTCSRLVSSCVRGRKFKVVRALLEVF 180
           TLRHLIRYLVRSKNWNLILLVSRDFVDYDVCPDRDTCSRLVSSCVRGRKFKVVRALLEVF
Sbjct: 121 TLRHLIRYLVRSKNWNLILLVSRDFVDYDVCPDRDTCSRLVSSCVRGRKFKVVRALLEVF 180

Query: 181 ERDRDVATAAFEAAMRGYNKLHMYKSTILVFQRLKSAKIEADSGCYCRVMEAYLKLGDSE 240
           ERDRDVATAAFEAAMRGYNKLHMYKSTILVFQRLKSAKIEADSGCYCRVMEAYLKLGDSE
Sbjct: 181 ERDRDVATAAFEAAMRGYNKLHMYKSTILVFQRLKSAKIEADSGCYCRVMEAYLKLGDSE 240

Query: 241 RIMELFNEIESRISDFTPFSTKIYGILCKSLAKSGRVFESLEFFRDMRKKGIVEDYTIYS 300
           RIMELFNEIESRISDFTPFSTKIYGILCKSLAKSGRVFESLEFFRDMRKKGIVEDYTIYS
Sbjct: 241 RIMELFNEIESRISDFTPFSTKIYGILCKSLAKSGRVFESLEFFRDMRKKGIVEDYTIYS 300

Query: 301 ALICTFASIQEVKLAEDLYNEAKTKKLLRDPAMFQKLILMYIQQGSLEKALEIVEVMKDF 360
           ALICTFASIQEVKLAEDLYNEAKTKKLLRDPAMFQKLILMYIQQGSLEKALEIVEVMKDF
Sbjct: 301 ALICTFASIQEVKLAEDLYNEAKTKKLLRDPAMFQKLILMYIQQGSLEKALEIVEVMKDF 360

Query: 361 KIGVSDCIFCAIVNGYATRRGYNAAVNVYEKLIRDECEPGQVTYALAINAYCRVGLYSKA 420
           KIGVSDCIFCAIVNGYATRRGYNAAVNVYEKLIRDECEPGQVTYALAINAYCRVGLYSKA
Sbjct: 361 KIGVSDCIFCAIVNGYATRRGYNAAVNVYEKLIRDECEPGQVTYALAINAYCRVGLYSKA 420

Query: 421 EDVFVEMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKERGCQPNVWIYNILMEM 480
           EDVFVEMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKERGCQPNVWIYNILMEM
Sbjct: 421 EDVFVEMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKERGCQPNVWIYNILMEM 480

Query: 481 HGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIINAYVKAAEFETCERYYREFRMNGGAID 540
           HGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIINAYVKAAEFETCERYYREFRMNGGAID
Sbjct: 481 HGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIINAYVKAAEFETCERYYREFRMNGGAID 540

Query: 541 KAIAGIMVGVFSKTSRVDELVKLLRDMNLEGIRLDERLYRSALNALMDAGLQVQAKWLQD 600
           KAIAGIMVGVFSKTSRVDELVKLLRDMNLEGIRLDERLYRSALNALMDAGLQVQAKWLQD
Sbjct: 541 KAIAGIMVGVFSKTSRVDELVKLLRDMNLEGIRLDERLYRSALNALMDAGLQVQAKWLQD 600

Query: 601 HYAGKSGFV 610
           HYAGKSGFV
Sbjct: 601 HYAGKSGFV 609

[Close]
BLAST of CmoCh15G009020 vs. NCBI nr
Match: KAG6579160.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1206.0 bits (3119), Expect = 0.0e+00
Identity = 606/609 (99.51%), Postives = 608/609 (99.84%), Query Frame = 0 

Query: 1   MAVTGSPDWSLPSSTCFRKSRLLTFIPASNLALLFSLPNLRSLHLNSSGCPSPILESSPT 60
           MAVTGSPDWSLPSSTCFRKSRLLTFIPASNLALLFSLPNLRSLHLNSSGCPSPILE+SPT
Sbjct: 1   MAVTGSPDWSLPSSTCFRKSRLLTFIPASNLALLFSLPNLRSLHLNSSGCPSPILETSPT 60

Query: 61  SLPEIDSDSNLQDFQLPSSSSVEDLNDFLCGLPQNPGREDLIYEYYVKAKETPGFRPEKS 120
           SLPEIDSDSNLQDFQLPSSSSVEDLNDFLCGLPQNPGREDLIYEYYVKAKETPGFRPEKS
Sbjct: 61  SLPEIDSDSNLQDFQLPSSSSVEDLNDFLCGLPQNPGREDLIYEYYVKAKETPGFRPEKS 120

Query: 121 TLRHLIRYLVRSKNWNLILLVSRDFVDYDVCPDRDTCSRLVSSCVRGRKFKVVRALLEVF 180
           TLRHLIRYLVRSKNWNLILLVSRDFVDYDVCPDRDTCSRLVSSCVRGRKFKVVRALLEVF
Sbjct: 121 TLRHLIRYLVRSKNWNLILLVSRDFVDYDVCPDRDTCSRLVSSCVRGRKFKVVRALLEVF 180

Query: 181 ERDRDVATAAFEAAMRGYNKLHMYKSTILVFQRLKSAKIEADSGCYCRVMEAYLKLGDSE 240
           ERDRDVATAAFEAAMRGYNKLHMYKSTILVFQRLKSAKIEADSGCYCRVMEAYLKLGDSE
Sbjct: 181 ERDRDVATAAFEAAMRGYNKLHMYKSTILVFQRLKSAKIEADSGCYCRVMEAYLKLGDSE 240

Query: 241 RIMELFNEIESRISDFTPFSTKIYGILCKSLAKSGRVFESLEFFRDMRKKGIVEDYTIYS 300
           RIMELFNEIESRISDFTPFSTKIYGILCKSLAKSGRVFESLEFFRDMRKKGIVEDYTIYS
Sbjct: 241 RIMELFNEIESRISDFTPFSTKIYGILCKSLAKSGRVFESLEFFRDMRKKGIVEDYTIYS 300

Query: 301 ALICTFASIQEVKLAEDLYNEAKTKKLLRDPAMFQKLILMYIQQGSLEKALEIVEVMKDF 360
           ALICTFASIQEVKLAEDLYNEAKTKKLLRDPAMFQKLILMYIQQGSLEKALEIVEVMKDF
Sbjct: 301 ALICTFASIQEVKLAEDLYNEAKTKKLLRDPAMFQKLILMYIQQGSLEKALEIVEVMKDF 360

Query: 361 KIGVSDCIFCAIVNGYATRRGYNAAVNVYEKLIRDECEPGQVTYALAINAYCRVGLYSKA 420
           KIGVSDCIFCAIVNGYATRRGYNAAVNVYEKLIRDECEPGQVTYALAINAYCRVGLYSKA
Sbjct: 361 KIGVSDCIFCAIVNGYATRRGYNAAVNVYEKLIRDECEPGQVTYALAINAYCRVGLYSKA 420

Query: 421 EDVFVEMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKERGCQPNVWIYNILMEM 480
           EDVFVEMEEKGFD CVVAYSSLISMYGKTGRLKDAMRLLAKMKERGCQPNVWIYNILMEM
Sbjct: 421 EDVFVEMEEKGFDNCVVAYSSLISMYGKTGRLKDAMRLLAKMKERGCQPNVWIYNILMEM 480

Query: 481 HGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIINAYVKAAEFETCERYYREFRMNGGAID 540
           HGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIINAYVKAAEFETCE+YYREFRMNGGAID
Sbjct: 481 HGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIINAYVKAAEFETCEQYYREFRMNGGAID 540

Query: 541 KAIAGIMVGVFSKTSRVDELVKLLRDMNLEGIRLDERLYRSALNALMDAGLQVQAKWLQD 600
           KAIAGIMVGVFSKTSRVDELVKLLRDMNLEGIRLDERLYRSALNALMDAGLQVQAKWLQD
Sbjct: 541 KAIAGIMVGVFSKTSRVDELVKLLRDMNLEGIRLDERLYRSALNALMDAGLQVQAKWLQD 600

Query: 601 HYAGKSGFV 610
           HYAGKSGFV
Sbjct: 601 HYAGKSGFV 609

[Close]
BLAST of CmoCh15G009020 vs. NCBI nr
Match: KAG7016679.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1204.5 bits (3115), Expect = 0.0e+00
Identity = 606/609 (99.51%), Postives = 607/609 (99.67%), Query Frame = 0 

Query: 1   MAVTGSPDWSLPSSTCFRKSRLLTFIPASNLALLFSLPNLRSLHLNSSGCPSPILESSPT 60
           MAVTGSPDWSLPSSTCFRKSRLLTFIPASNLALLFSLPNLRSLHLNSSGCPSPILESSPT
Sbjct: 1   MAVTGSPDWSLPSSTCFRKSRLLTFIPASNLALLFSLPNLRSLHLNSSGCPSPILESSPT 60

Query: 61  SLPEIDSDSNLQDFQLPSSSSVEDLNDFLCGLPQNPGREDLIYEYYVKAKETPGFRPEKS 120
           SLPEIDSDSNLQDFQLPSSSSVEDLNDFLCGLPQNPGREDLIYEYYVKAKETPGFRPEKS
Sbjct: 61  SLPEIDSDSNLQDFQLPSSSSVEDLNDFLCGLPQNPGREDLIYEYYVKAKETPGFRPEKS 120

Query: 121 TLRHLIRYLVRSKNWNLILLVSRDFVDYDVCPDRDTCSRLVSSCVRGRKFKVVRALLEVF 180
           TLRHLIRYLVRSKNWNLI LVSRDFVDYDVCPDRDTCSRLVSSCVRGRKFKVVRALLEVF
Sbjct: 121 TLRHLIRYLVRSKNWNLIFLVSRDFVDYDVCPDRDTCSRLVSSCVRGRKFKVVRALLEVF 180

Query: 181 ERDRDVATAAFEAAMRGYNKLHMYKSTILVFQRLKSAKIEADSGCYCRVMEAYLKLGDSE 240
           ERDRDVATAAFEAAMRGYNKLHMYKSTILVFQRLKSAKIEADSGCYCRVMEAYLKLGDSE
Sbjct: 181 ERDRDVATAAFEAAMRGYNKLHMYKSTILVFQRLKSAKIEADSGCYCRVMEAYLKLGDSE 240

Query: 241 RIMELFNEIESRISDFTPFSTKIYGILCKSLAKSGRVFESLEFFRDMRKKGIVEDYTIYS 300
           RIMELFNEIESRISDFTPFSTKIYGILCKSLAKSGRVFESLEFFRDMRKKGIVEDYTIYS
Sbjct: 241 RIMELFNEIESRISDFTPFSTKIYGILCKSLAKSGRVFESLEFFRDMRKKGIVEDYTIYS 300

Query: 301 ALICTFASIQEVKLAEDLYNEAKTKKLLRDPAMFQKLILMYIQQGSLEKALEIVEVMKDF 360
           ALICTFASIQEVKLAEDLYNEAKTKKLLRDPAMFQKLILMYIQQGSLEKALEIVEVMKDF
Sbjct: 301 ALICTFASIQEVKLAEDLYNEAKTKKLLRDPAMFQKLILMYIQQGSLEKALEIVEVMKDF 360

Query: 361 KIGVSDCIFCAIVNGYATRRGYNAAVNVYEKLIRDECEPGQVTYALAINAYCRVGLYSKA 420
           KIGVSDCIFCAIVNGYATRRGYNAAVNVYEKLIRDECEPGQVTYALAINAYCRVGLYSKA
Sbjct: 361 KIGVSDCIFCAIVNGYATRRGYNAAVNVYEKLIRDECEPGQVTYALAINAYCRVGLYSKA 420

Query: 421 EDVFVEMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKERGCQPNVWIYNILMEM 480
           EDVFVEMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKERGCQPNVWIYNILMEM
Sbjct: 421 EDVFVEMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKERGCQPNVWIYNILMEM 480

Query: 481 HGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIINAYVKAAEFETCERYYREFRMNGGAID 540
           HGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIINAYVKAAEFETCERYYREFRMNGGAID
Sbjct: 481 HGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIINAYVKAAEFETCERYYREFRMNGGAID 540

Query: 541 KAIAGIMVGVFSKTSRVDELVKLLRDMNLEGIRLDERLYRSALNALMDAGLQVQAKWLQD 600
           KAIAGIMVGVFSKTSRVDELVKLLRDMNLEGIRLDERLYRSALNAL+DAGLQVQAKWLQD
Sbjct: 541 KAIAGIMVGVFSKTSRVDELVKLLRDMNLEGIRLDERLYRSALNALLDAGLQVQAKWLQD 600

Query: 601 HYAGKSGFV 610
           H AGKSGFV
Sbjct: 601 HCAGKSGFV 609

[Close]
BLAST of CmoCh15G009020 vs. NCBI nr
Match: XP_023551389.1 (pentatricopeptide repeat-containing protein At5g13770, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1201.4 bits (3107), Expect = 0.0e+00
Identity = 605/609 (99.34%), Postives = 607/609 (99.67%), Query Frame = 0 

Query: 1   MAVTGSPDWSLPSSTCFRKSRLLTFIPASNLALLFSLPNLRSLHLNSSGCPSPILESSPT 60
           MAVTGSPDWSLPSSTCFRKSRLLTFIPASNLALLFSLPNLRSLHLNSSGCPSPILESS T
Sbjct: 1   MAVTGSPDWSLPSSTCFRKSRLLTFIPASNLALLFSLPNLRSLHLNSSGCPSPILESSHT 60

Query: 61  SLPEIDSDSNLQDFQLPSSSSVEDLNDFLCGLPQNPGREDLIYEYYVKAKETPGFRPEKS 120
           SLPEIDSDSNLQDFQLPSSSSVEDLNDFLCGLPQNPGREDLIYEYYVKAKETPGFRPEKS
Sbjct: 61  SLPEIDSDSNLQDFQLPSSSSVEDLNDFLCGLPQNPGREDLIYEYYVKAKETPGFRPEKS 120

Query: 121 TLRHLIRYLVRSKNWNLILLVSRDFVDYDVCPDRDTCSRLVSSCVRGRKFKVVRALLEVF 180
           TLRHLIRYLVRSKNWNLILLVSRDFVDYDVCPDRDTCSRLVSSCVRGRKFKVVRALLEVF
Sbjct: 121 TLRHLIRYLVRSKNWNLILLVSRDFVDYDVCPDRDTCSRLVSSCVRGRKFKVVRALLEVF 180

Query: 181 ERDRDVATAAFEAAMRGYNKLHMYKSTILVFQRLKSAKIEADSGCYCRVMEAYLKLGDSE 240
           ERD+DVATAAFEAAMRGYNKLHMYKSTILVFQRLKSAKIEADSGCYCRVMEA LKLGDS+
Sbjct: 181 ERDKDVATAAFEAAMRGYNKLHMYKSTILVFQRLKSAKIEADSGCYCRVMEACLKLGDSD 240

Query: 241 RIMELFNEIESRISDFTPFSTKIYGILCKSLAKSGRVFESLEFFRDMRKKGIVEDYTIYS 300
           RIMELFNEIESRISDFTPFSTKIYGILCKSLAKSGRVFESLEFFRDMRKKGIVEDYTIYS
Sbjct: 241 RIMELFNEIESRISDFTPFSTKIYGILCKSLAKSGRVFESLEFFRDMRKKGIVEDYTIYS 300

Query: 301 ALICTFASIQEVKLAEDLYNEAKTKKLLRDPAMFQKLILMYIQQGSLEKALEIVEVMKDF 360
           ALICTFASIQEVKLAEDLYNEAKTKKLLRDPAMFQKLILMYIQQGSLEKALEIVEVMKDF
Sbjct: 301 ALICTFASIQEVKLAEDLYNEAKTKKLLRDPAMFQKLILMYIQQGSLEKALEIVEVMKDF 360

Query: 361 KIGVSDCIFCAIVNGYATRRGYNAAVNVYEKLIRDECEPGQVTYALAINAYCRVGLYSKA 420
           KIGVSDCIFCAIVNGYATRRGYNAAVNVYEKLIRDECEPGQVTYALAINAYCRVGLYSKA
Sbjct: 361 KIGVSDCIFCAIVNGYATRRGYNAAVNVYEKLIRDECEPGQVTYALAINAYCRVGLYSKA 420

Query: 421 EDVFVEMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKERGCQPNVWIYNILMEM 480
           EDVFVEMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKERGCQPNVWIYNILMEM
Sbjct: 421 EDVFVEMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKERGCQPNVWIYNILMEM 480

Query: 481 HGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIINAYVKAAEFETCERYYREFRMNGGAID 540
           HGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIINAYVKAAEFETCERYYREFRMNGGAID
Sbjct: 481 HGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIINAYVKAAEFETCERYYREFRMNGGAID 540

Query: 541 KAIAGIMVGVFSKTSRVDELVKLLRDMNLEGIRLDERLYRSALNALMDAGLQVQAKWLQD 600
           KAIAGIMVGVFSKTSRVDELVKLLRDMNLEGIRLDERLYRSALNALMDAGLQVQAKWLQD
Sbjct: 541 KAIAGIMVGVFSKTSRVDELVKLLRDMNLEGIRLDERLYRSALNALMDAGLQVQAKWLQD 600

Query: 601 HYAGKSGFV 610
           HYAGKSGFV
Sbjct: 601 HYAGKSGFV 609

[Close]
BLAST of CmoCh15G009020 vs. NCBI nr
Match: XP_022993436.1 (pentatricopeptide repeat-containing protein At5g13770, chloroplastic isoform X1 [Cucurbita maxima])

HSP 1 Score: 1196.4 bits (3094), Expect = 0.0e+00
Identity = 600/609 (98.52%), Postives = 604/609 (99.18%), Query Frame = 0 

Query: 1   MAVTGSPDWSLPSSTCFRKSRLLTFIPASNLALLFSLPNLRSLHLNSSGCPSPILESSPT 60
           MAVTGSPDWSLPSSTCFRKSRL+TFIPASNLALLFSLPNLRSLHLNSSGCPSPILESSPT
Sbjct: 1   MAVTGSPDWSLPSSTCFRKSRLITFIPASNLALLFSLPNLRSLHLNSSGCPSPILESSPT 60

Query: 61  SLPEIDSDSNLQDFQLPSSSSVEDLNDFLCGLPQNPGREDLIYEYYVKAKETPGFRPEKS 120
           SLPEIDSDSNLQDFQLPSSSSVEDLNDFLCGLPQNPGREDLIYEYYVKAKETPGFRPEKS
Sbjct: 61  SLPEIDSDSNLQDFQLPSSSSVEDLNDFLCGLPQNPGREDLIYEYYVKAKETPGFRPEKS 120

Query: 121 TLRHLIRYLVRSKNWNLILLVSRDFVDYDVCPDRDTCSRLVSSCVRGRKFKVVRALLEVF 180
           TLRHLIRYLVR K W+LILLVSRDFVDYDVCPDRDTCSRLVSSCVRGRKFKVVRALLEVF
Sbjct: 121 TLRHLIRYLVRLKKWSLILLVSRDFVDYDVCPDRDTCSRLVSSCVRGRKFKVVRALLEVF 180

Query: 181 ERDRDVATAAFEAAMRGYNKLHMYKSTILVFQRLKSAKIEADSGCYCRVMEAYLKLGDSE 240
           ERDRDVATAAFEAAMRGYNKLHMY+STILVFQRLKSAKIEADSGCYCRVMEAYLKLGDSE
Sbjct: 181 ERDRDVATAAFEAAMRGYNKLHMYRSTILVFQRLKSAKIEADSGCYCRVMEAYLKLGDSE 240

Query: 241 RIMELFNEIESRISDFTPFSTKIYGILCKSLAKSGRVFESLEFFRDMRKKGIVEDYTIYS 300
           RIMELFNEIESRISDFTPFSTKIYGILCKSLAKSGRVFESLEFFRDMRKKGIVEDYTIYS
Sbjct: 241 RIMELFNEIESRISDFTPFSTKIYGILCKSLAKSGRVFESLEFFRDMRKKGIVEDYTIYS 300

Query: 301 ALICTFASIQEVKLAEDLYNEAKTKKLLRDPAMFQKLILMYIQQGSLEKALEIVEVMKDF 360
           ALICTFASIQEVKLAEDLYNEAKTKKLLRDPA FQKLILMYIQQGSLEKALEIVEVMKDF
Sbjct: 301 ALICTFASIQEVKLAEDLYNEAKTKKLLRDPATFQKLILMYIQQGSLEKALEIVEVMKDF 360

Query: 361 KIGVSDCIFCAIVNGYATRRGYNAAVNVYEKLIRDECEPGQVTYALAINAYCRVGLYSKA 420
           KIG SDCIFCAIVNGYATRRGYNAAVN+YEKLIRDECEPGQVTYALAINAYCRVGLYSKA
Sbjct: 361 KIGASDCIFCAIVNGYATRRGYNAAVNIYEKLIRDECEPGQVTYALAINAYCRVGLYSKA 420

Query: 421 EDVFVEMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKERGCQPNVWIYNILMEM 480
           EDVFVEMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKERGCQPNVWIYNILMEM
Sbjct: 421 EDVFVEMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKERGCQPNVWIYNILMEM 480

Query: 481 HGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIINAYVKAAEFETCERYYREFRMNGGAID 540
           HGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIINAYVKAAEFETCERYYREFRMNGG ID
Sbjct: 481 HGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIINAYVKAAEFETCERYYREFRMNGGTID 540

Query: 541 KAIAGIMVGVFSKTSRVDELVKLLRDMNLEGIRLDERLYRSALNALMDAGLQVQAKWLQD 600
           KAIAGIMVGVFSKTSRVDELVKLLRDMNLEGIRLDERLYRSALNALMDAGLQVQAKWLQD
Sbjct: 541 KAIAGIMVGVFSKTSRVDELVKLLRDMNLEGIRLDERLYRSALNALMDAGLQVQAKWLQD 600

Query: 601 HYAGKSGFV 610
           HYAGKSGFV
Sbjct: 601 HYAGKSGFV 609

[Close]
BLAST of CmoCh15G009020 vs. TAIR 10
Match: AT5G13770.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 582.4 bits (1500), Expect = 4.2e-166
Identity = 298/563 (52.93%), Postives = 397/563 (70.52%), Query Frame = 0 

Query: 42  SLHLNSSGCPSPILESSPTSLPEIDSDSNLQDFQLPSSSSVEDLNDFLCGLPQNPGREDL 101
           + H+ SS C S +LE      P    D     F  P  +   DLN  L    ++P    L
Sbjct: 37  NFHVCSSRC-SMVLEEDEKKSPSPKEDK--WPFFEPGPN---DLNRVLSRFLRDPETRKL 96

Query: 102 IYEYYVKAKETPGFRPEKSTLRHLIRYLVRSKNWNLILLVSRDFVDYDVCPDRDTCSRLV 161
             E+Y KAKE    R    T +HLI YLV SK+W+L++ V  D  ++   PD  TCS L+
Sbjct: 97  SSEFYEKAKENSELR----TTKHLISYLVSSKSWDLLVSVCEDLREHKALPDGQTCSNLI 156

Query: 162 SSCVRGRKFKVVRALLEVFERDRDVATAAFEAAMRGYNKLHMYKSTILVFQRLK-SAKIE 221
            SC+R RKF++   LL VF  D+ +A +A +AAM+G+NKL MY STI VF RLK S  +E
Sbjct: 157 RSCIRDRKFRITHCLLSVFRSDKSLAVSASDAAMKGFNKLQMYSSTIQVFDRLKQSVGVE 216

Query: 222 ADSGCYCRVMEAYLKLGDSERIMELFNEIES-RISDFTPFSTKIYGILCKSLAKSGRVFE 281
              GCYCR+MEA+ K+G++ +++ELF E +S R+S     S  IY I+C SLAKSGR FE
Sbjct: 217 PSPGCYCRIMEAHEKIGENHKVVELFQEFKSQRLSFLAKESGSIYTIVCSSLAKSGRAFE 276

Query: 282 SLEFFRDMRKKGIVEDYTIYSALICTFASIQEVKLAEDLYNEAKTKKLLRDPAMFQKLIL 341
           +LE   +M+ KGI E   +YS LI  FA  +EV + E L+ EA  KKLL+DP M  K++L
Sbjct: 277 ALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLKVVL 336

Query: 342 MYIQQGSLEKALEIVEVMKDFKIGVSDCIFCAIVNGYATRRGYNAAVNVYEKLIRDECEP 401
           MY+++G++E  LE+V  M+  ++ V+DCI CAIVNG++ +RG+  AV VYE  +++ECE 
Sbjct: 337 MYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECEA 396

Query: 402 GQVTYALAINAYCRVGLYSKAEDVFVEMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLL 461
           GQVTYA+AINAYCR+  Y+KAE +F EM +KGFDKCVVAYS+++ MYGKT RL DA+RL+
Sbjct: 397 GQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLM 456

Query: 462 AKMKERGCQPNVWIYNILMEMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIINAYVKA 521
           AKMK+RGC+PN+WIYN L++MHG+A +L++ EK+WKEMKR K+ PDKVSYTS+I+AY ++
Sbjct: 457 AKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRS 516

Query: 522 AEFETCERYYREFRMNGGAIDKAIAGIMVGVFSKTSRVDELVKLLRDMNLEGIRLDERLY 581
            E E C   Y+EFRMN G ID+A+AGIMVGVFSKTSR+DEL++LL+DM +EG RLD RLY
Sbjct: 517 KELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQDMKVEGTRLDARLY 576

Query: 582 RSALNALMDAGLQVQAKWLQDHY 603
            SALNAL DAGL  Q +WLQ+ +
Sbjct: 577 SSALNALRDAGLNSQIRWLQESF 589

[Close]
BLAST of CmoCh15G009020 vs. TAIR 10
Match: AT5G42310.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 145.6 bits (366), Expect = 1.3e-34
Identity = 105/448 (23.44%), Postives = 202/448 (45.09%), Query Frame = 0 

Query: 144 DFVDYDVCPDRDTCSRLVSSCVRGRKFKVVRALLEVFERDR-DVATAAFEAAMRGYNKLH 203
           DFV+Y +     T S  + S +  R +K +       ERD+ ++        + G+ K  
Sbjct: 231 DFVNYSLVIQSLTRSNKIDSVMLLRLYKEI-------ERDKLELDVQLVNDIIMGFAKSG 290

Query: 204 MYKSTILVFQRLKSAKIEADSGCYCRVMEAYLKLGDSERIME---LFNEIESRISDFTPF 263
                + +    ++  + A +     ++ A   L DS R +E   LF E+  R S   P 
Sbjct: 291 DPSKALQLLGMAQATGLSAKTATLVSIISA---LADSGRTLEAEALFEEL--RQSGIKP- 350

Query: 264 STKIYGILCKSLAKSGRVFESLEFFRDMRKKGIVEDYTIYSALICTFASIQEVKLAEDLY 323
            T+ Y  L K   K+G + ++     +M K+G+  D   YS LI  + +    + A  + 
Sbjct: 351 RTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVL 410

Query: 324 NEAKTKKLLRDPAMFQKLILMYIQQGSLEKALEIVEVMKDFKIGVSDCIFCAIVNGYATR 383
            E +   +  +  +F +L+  +  +G  +K  ++++ MK   +      +  +++ +   
Sbjct: 411 KEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKF 470

Query: 384 RGYNAAVNVYEKLIRDECEPGQVTYALAINAYCRVGLYSKAEDVFVEMEEKGFDKCVVAY 443
              + A+  +++++ +  EP +VT+   I+ +C+ G +  AE++F  ME +G   C   Y
Sbjct: 471 NCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTY 530

Query: 444 SSLISMYGKTGRLKDAMRLLAKMKERGCQPNVWIYNILMEMHGKAKNLKQVEKLWKEMKR 503
           + +I+ YG   R  D  RLL KMK +G  PNV  +  L++++GK+       +  +EMK 
Sbjct: 531 NIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKS 590

Query: 504 KKIAPDKVSYTSIINAYVKAAEFETCERYYREFRMNGGAIDKAIAGIMVGVFSKTSRVDE 563
             + P    Y ++INAY +    E     +R    +G          ++  F +  R  E
Sbjct: 591 VGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAE 650

Query: 564 LVKLLRDMNLEGIRLDERLYRSALNALM 588
              +L+ M   G++ D   Y + + AL+
Sbjct: 651 AFAVLQYMKENGVKPDVVTYTTLMKALI 665

[Close]
BLAST of CmoCh15G009020 vs. TAIR 10
Match: AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 144.4 bits (363), Expect = 2.9e-34
Identity = 100/474 (21.10%), Postives = 205/474 (43.25%), Query Frame = 0 

Query: 114 GFRPEKSTLRHLIRYLVRSKNWNLILLVSRDFVDYDVCPDRDTCSRLVSSCVRGRKFKVV 173
           G +P+      ++  LV   +  L+ +       + + PD  T + L+ +  R  + +  
Sbjct: 149 GLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPA 208

Query: 174 RALLEVFERDRDVA-TAAFEAAMRGYNKLHMYKSTILVFQRLKSAKIEADSGCYCRVMEA 233
             +LE       V     F   M+GY +       + + +++        +     ++  
Sbjct: 209 ILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHG 268

Query: 234 YLKLGDSERIMELFNEIESRISDFTPFSTKIYGILCKSLAKSGRVFESLEFFRDMRKKGI 293
           + K G  E  +    E+ ++   F    T  +  L   L K+G V  ++E    M ++G 
Sbjct: 269 FCKEGRVEDALNFIQEMSNQDGFFPDQYT--FNTLVNGLCKAGHVKHAIEIMDVMLQEGY 328

Query: 294 VEDYTIYSALICTFASIQEVKLAEDLYNEAKTKKLLRDPAMFQKLILMYIQQGSLEKALE 353
             D   Y+++I     + EVK A ++ ++  T+    +   +  LI    ++  +E+A E
Sbjct: 329 DPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATE 388

Query: 354 IVEVMKDFKIGVSDCIFCAIVNGYATRRGYNAAVNVYEKLIRDECEPGQVTYALAINAYC 413
           +  V+    I    C F +++ G    R +  A+ ++E++    CEP + TY + I++ C
Sbjct: 389 LARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLC 448

Query: 414 RVGLYSKAEDVFVEMEEKGFDKCVVAYSSLISMYGKTGRLKDAMRLLAKMKERGCQPNVW 473
             G   +A ++  +ME  G  + V+ Y++LI  + K  + ++A  +  +M+  G   N  
Sbjct: 449 SKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSV 508

Query: 474 IYNILMEMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIINAYVKAAEFETCERYYREF 533
            YN L++   K++ ++   +L  +M  +   PDK +Y S++  + +  + +      +  
Sbjct: 509 TYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAM 568

Query: 534 RMNGGAIDKAIAGIMVGVFSKTSRVDELVKLLRDMNLEGIRLDERLYRSALNAL 587
             NG   D    G ++    K  RV+   KLLR + ++GI L    Y   +  L
Sbjct: 569 TSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGL 620

[Close]
BLAST of CmoCh15G009020 vs. TAIR 10
Match: AT3G22470.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 142.5 bits (358), Expect = 1.1e-33
Identity = 113/498 (22.69%), Postives = 206/498 (41.37%), Query Frame = 0 

Query: 89  LCGLPQNPGREDLIYEYYVKAKETPGFRPEKSTLRHLIRYLVRSKNWNLILLVSRDFVDY 148
           LC       + DL+   + K  E  G   +  T+  +I    R K       V       
Sbjct: 76  LCSAVARTKQYDLVLG-FCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKL 135

Query: 149 DVCPDRDTCSRLVSS-CVRGRKFKVVRALLEVFERDRDVATAAFEAAMRGYNKLHMYKST 208
              PD  T S LV+  C+ GR  + V  +  + E  +          + G          
Sbjct: 136 GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEA 195

Query: 209 ILVFQRLKSAKIEADSGCYCRVMEAYLKLGDSERIMELFNEIESRISDFTPFSTKIYGIL 268
           +++  R+     + D   Y  V+    K G+S   ++LF ++E R       S   Y I+
Sbjct: 196 LVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEER---NIKASVVQYSIV 255

Query: 269 CKSLAKSGRVFESLEFFRDMRKKGIVEDYTIYSALICTFASIQEVKLAEDLYNEAKTKKL 328
             SL K G   ++L  F +M  KGI  D   YS+LI    +  +      +  E   + +
Sbjct: 256 IDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNI 315

Query: 329 LRDPAMFQKLILMYIQQGSLEKALEIVEVMKDFKIGVSDCIFCAIVNGYATRRGYNAAVN 388
           + D   F  LI +++++G L +A E+   M    I      + ++++G+      + A  
Sbjct: 316 IPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQ 375

Query: 389 VYEKLIRDECEPGQVTYALAINAYCRVGLYSKAEDVFVEMEEKGFDKCVVAYSSLISMYG 448
           +++ ++   CEP  VTY++ IN+YC+         +F E+  KG     + Y++L+  + 
Sbjct: 376 MFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFC 435

Query: 449 KTGRLKDAMRLLAKMKERGCQPNVWIYNILMEMHGKAKNLKQVEKLWKEMKRKKIAPDKV 508
           ++G+L  A  L  +M  RG  P+V  Y IL++       L +  +++++M++ ++     
Sbjct: 436 QSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIG 495

Query: 509 SYTSIINAYVKAAEFETCERYYREFRMNGGAIDKAIAGIMVGVFSKTSRVDELVKLLRDM 568
            Y  II+    A++ +     +      G   D     +M+G   K   + E   L R M
Sbjct: 496 IYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKM 555

Query: 569 NLEGIRLDERLYRSALNA 586
             +G   D+  Y   + A
Sbjct: 556 KEDGCTPDDFTYNILIRA 569

[Close]
BLAST of CmoCh15G009020 vs. TAIR 10
Match: AT2G35130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 139.8 bits (351), Expect = 7.2e-33
Identity = 96/415 (23.13%), Postives = 190/415 (45.78%), Query Frame = 0 

Query: 191 FEAAMRGYNKLHMYKSTILVFQRLKSAKIEADSGCYCRVMEAYLKLGDSERIMELFNEIE 250
           F   +  Y +   YK    ++ +L  ++       Y  +++AY   G  ER   +  E++
Sbjct: 158 FNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQ 217

Query: 251 SRISDFTPFSTKIYGILCKSLAK-SGRVFESLEFFRDMRKKGIVEDYTIYSALICTFASI 310
           +           +Y    + L K  G   E+++ F+ M++         Y+ +I  +   
Sbjct: 218 NHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKA 277

Query: 311 QEVKLAEDLYNEAKTKKLLRDPAMFQKLILMYIQQGSLEKALEIVEVMKDFKIGVSDCIF 370
            +  ++  LY E ++ +   +   +  L+  + ++G  EKA EI E +++  +     ++
Sbjct: 278 SKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVY 337

Query: 371 CAIVNGYATRRGY-NAAVNVYEKLIRDECEPGQVTYALAINAYCRVGLYSKAEDVFVEME 430
            A++  Y +R GY   A  ++  +    CEP + +Y + ++AY R GL+S AE VF EM+
Sbjct: 338 NALMESY-SRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMK 397

Query: 431 -----------------------------------EKGFDKCVVAYSSLISMYGKTGRLK 490
                                              E G +      +S++++YG+ G+  
Sbjct: 398 RLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFT 457

Query: 491 DAMRLLAKMKERGCQPNVWIYNILMEMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSII 550
              ++LA+M+   C  ++  YNIL+ ++GKA  L+++E+L+ E+K K   PD V++TS I
Sbjct: 458 KMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRI 517

Query: 551 NAYVKAAEFETCERYYREFRMNGGAIDKAIAGIMVGVFSKTSRVDELVKLLRDMN 569
            AY +   +  C   + E   +G A D   A +++   S   +V+++  +LR M+
Sbjct: 518 GAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMH 571

The following BLAST results are available for this feature:
BLAST of CmoCh15G009020 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q66GP45.9e-16552.93Pentatricopeptide repeat-containing protein At5g13770, chloroplastic OS=Arabidop... [more]
Q8L8441.8e-3323.44Pentatricopeptide repeat-containing protein At5g42310, chloroplastic OS=Arabidop... [more]
Q9LFF14.1e-3321.10Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... [more]
Q6NQ831.6e-3222.69Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidop... [more]
O821781.0e-3123.13Pentatricopeptide repeat-containing protein At2g35130 OS=Arabidopsis thaliana OX... [more]
BLAST of CmoCh15G009020 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FDV40.0e+00100.00pentatricopeptide repeat-containing protein At5g13770, chloroplastic OS=Cucurbit... [more]
A0A6J1JWB40.0e+0098.52pentatricopeptide repeat-containing protein At5g13770, chloroplastic isoform X1 ... [more]
A0A1S3CPF01.4e-30588.05pentatricopeptide repeat-containing protein At5g13770, chloroplastic OS=Cucumis ... [more]
A0A5A7VR013.3e-30487.73Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A0A0KPV83.3e-30487.07Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G114580 PE=4 SV=1[more]
BLAST of CmoCh15G009020 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022938691.10.0e+00100.00pentatricopeptide repeat-containing protein At5g13770, chloroplastic [Cucurbita ... [more]
KAG6579160.10.0e+0099.51Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... [more]
KAG7016679.10.0e+0099.51Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... [more]
XP_023551389.10.0e+0099.34pentatricopeptide repeat-containing protein At5g13770, chloroplastic isoform X1 ... [more]
XP_022993436.10.0e+0098.52pentatricopeptide repeat-containing protein At5g13770, chloroplastic isoform X1 ... [more]
BLAST of CmoCh15G009020 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G13770.14.2e-16652.93Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT5G42310.11.3e-3423.44Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT3G53700.12.9e-3421.10Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G22470.11.1e-3322.69Pentatricopeptide repeat (PPR) superfamily protein [more]
AT2G35130.17.2e-3323.13Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 423..483
e-value: 2.2E-13
score: 50.0
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 337..361
e-value: 0.81
score: 10.1
coord: 226..251
e-value: 0.17
score: 12.2
coord: 507..536
e-value: 0.0053
score: 16.9
coord: 265..292
e-value: 0.0045
score: 17.1
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 402..432
e-value: 3.9E-7
score: 27.8
coord: 507..536
e-value: 1.3E-4
score: 19.9
coord: 473..505
e-value: 2.1E-7
score: 28.7
coord: 264..293
e-value: 0.0017
score: 16.4
coord: 437..471
e-value: 1.4E-9
score: 35.5
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 400..434
score: 11.027125
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 260..294
score: 9.898111
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 505..539
score: 8.692369
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 470..504
score: 10.961357
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 435..469
score: 12.868624
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 430..501
e-value: 1.5E-20
score: 75.5
coord: 327..429
e-value: 1.4E-13
score: 52.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 502..601
e-value: 2.1E-14
score: 55.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 97..326
e-value: 1.2E-20
score: 76.1
NoneNo IPR availablePANTHERPTHR47934:SF14OSJNBA0088A01.11 PROTEINcoord: 1..603
NoneNo IPR availablePANTHERPTHR47934PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PET309, MITOCHONDRIALcoord: 1..603

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh15G009020.1CmoCh15G009020.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009658 chloroplast organization
molecular_function GO:0003729 mRNA binding
molecular_function GO:0005515 protein binding