CmoCh15G008230 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCATTTTACAACTCAAACATTGATGAATATACGCGCTAGTGATTCATCGAAAAGGATGGTTGCCACATTATCAGGTTGAATCCCAGCTTTCCAAGTCGACATGGGGACCCTCCTGATCTTCTTCTCAAGTAAGGTCATGAATTTTTCTCTCCCTCCACTAATTTTTCCTCTTTTGATCTGCCGACTTGAATTATCCTTGGATTTTTTTTTTCCCGTTTCTAGTTTGTTTGGAATGAATTAAGATCAAAATGGGATTTCCTGAATACCCATAATGAACTAGAAATATATCTTTTGGGATCGTGCACACAAGGTGTTTGATGTAAGTCCTGGTACTTTTTTCACCTTCAGTGTGGTGCTTACAAGCTTTTTTTGATGCTGGGTGTGTCAGAGGAGAAGAAAATAGCGGTTATATTAGGTAAACAACTGAGATTTTGTACTGAAAACATGATATCAAATGTCATTTCTGGTAAAACTATGCGACCGTTATGCCTTTTAGCATGTGCTAGGTGTTAGTTTTACCAATTGGGGTCTATGAAAAGTCAGCTGGCATCAGAAAGCCAATAAGCCAGCTCAAAAGTTTCAAAATCAAAGCCTCACCATTTTAAATTGAGGAAAAGTAGGAATCTGTAGTGCTATGATACAAAAGTTGTCTTGGGATCTATTTTCAATGGCCAACTTTTTCTATACTTTCTTCTTCTTATTTACTTTATCTGGGTGGGGTTGGGAGGTGGTTAAGAAATCGAATCCAAATTTCTAAATGGTATCATCAGAATTCATGTTAATAAATGTTCTAACTATGAACATTCTTATATGGGTTATCTTTGTTGAGTTGATCCTCCCCCTCACCGGATTGAGGCCTTTGTAGGATGAATGTTGTTACTCTCTCATTTCCTTGAGGTTTTTGTTGAGCTAATGCTTAGAACAAGGCCTGTTCTGCAAGAGATTAGCCTTTCTTCCGAAGCTTTCTTAGGAGATTGGAGATATTTCAAAAGGCTTTCTGTTTTGCTTTCTTTCTAAAGTTACTAAACCTAAGATCTCTTTTTCTTTTTCTTTTTCCCAATTATCTTAATCTTTTTATTCTTTCTGATGCATCCTGGATGACTCAGACAACAGAAAGTAAGATTCACCAACAATTTTCGATCCCTTTAAATATAGTGGGAGAGCCAGAGATTGATACACTAGTCATTAAGAAAACATCTCCTCCCTGCTTCTTGCTAGTTAAGAACATCCTGGTTGAGTGGCTGTAGAGATCAAGCCACTCCTAGCAAGAGAATTTGTATACCTGAATTTTCTTTATCATTAATCAAAGATGGAAGCTTTACTACAGAGACATGTTATTGGATTTCCAATTGGATCATCAGTTCAGAGACTCTTACCTGATCTTGCTGGCCACTACAACATTCCATCTCCAGACAGTAAATACCCAACATTAAAACAATGTAAGAAATCCCCCAAACTCATGCTTTGATAAATGAATGAATGAACAAGAAATGGGTTTTTGGATTGAGAATAGTCTTCACTTTCCAGGTAGTAAAGATTCAATGCTTAGCAGGGTGAACAAGCTTGGTAAAAGAGCTGACAGCTTTGCTCATGGAGTCCGGGAGCATGGTGAGTTTGTTAGTCTAGTTTCTTAGTTTATTATTAAGATTCTCAAACGCTTTGATATGCTGCTCAAGAGAACAAAGAATTGGGATGAATAAACATCCAAGTGAGCTGATTAGAATGAAAGTTTGATAGAAACTTTTCGGTTTATGAGCAGTGAAACTAGGATCCAAGATCACAGAAACTGTCAAAGGAAAGTTGAGCTTAGGAGCTAGAATTCTTCAAGTAGGTGGATTAAGAAAAATCTACAAGCAATTGTTTAATGTTGGAGATGGCGAGAAACTATTGAAGGCTGTCCACTGCTATTTGTCAACCACAGCTGGACCTATTGCAGGTCTGCTCTTCATATCCACAGCTAAGATCGCCTTCTGCAGCGACAGATCGATCAAAGTTTCTTCCCCCACCGGAGAGCTAATTCGATTCCATTACAAGGTAAGCTCGCCCGAGCAATAGTTGCTTTCTTGTTCATCATCGTCGTCGTCATCATCTTCTTCCTCTCACGCAGCACTAAAACTCGAAAGAAATGGTTGTCTGCAGGTATTGATTCCAGTAGGAAAAATAGAGAGAATCAATCAAAGTGAGAATGTGATGAAGCCTTCACAGAAGTACATGGAAATAGTTACGGTGGATAATTTTGACTTCTGGTTTATGGGGTTCTTGAAATATCGCAAAACTCTTCAATATCTTCAAGATGTGATCTATCAAGAATGCAAGAGATGCTAGATGCTTGGAGGAAGATAATGCAGCAGAAATGTTCTTTGGTTTTGATCACAATACAATCAACTCAATTGTACAAATTCTCTTGTGATTGACAAGTTATGTTCTCCACTTCTTCATCCTATTTCCTTGAAAGTTTCAAACTTTTACATTCAAAATCTCTCTCTAAGAAGATCCCACCTTTTGGATAAGCATCATCTCACCATAACATGACTTTACATGTCAATATATTGTCACCATTAGTAGTAAATCTATATTTAGATGATTGGCTTAATAAGTAAAATAAGTTTAGGCAAACGATCAC TTCATTTTACAACTCAAACATTGATGAATATACGCGCTAGTGATTCATCGAAAAGGATGGTTGCCACATTATCAGGTTGAATCCCAGCTTTCCAAGTCGACATGGGGACCCTCCTGATCTTCTTCTCAAGTAAGACAACAGAAAGTAAGATTCACCAACAATTTTCGATCCCTTTAAATATAGTGGGAGAGCCAGAGATTGATACACTAGTCATTAAGAAAACATCTCCTCCCTGCTTCTTGCTAGTTAAGAACATCCTGGTTGAGTGGCTGTAGAGATCAAGCCACTCCTAGCAAGAGAATTTGTATACCTGAATTTTCTTTATCATTAATCAAAGATGGAAGCTTTACTACAGAGACATGTTATTGGATTTCCAATTGGATCATCAGTTCAGAGACTCTTACCTGATCTTGCTGGCCACTACAACATTCCATCTCCAGACAGTAAATACCCAACATTAAAACAATGTAGTAAAGATTCAATGCTTAGCAGGGTGAACAAGCTTGGTAAAAGAGCTGACAGCTTTGCTCATGGAGTCCGGGAGCATGTGAAACTAGGATCCAAGATCACAGAAACTGTCAAAGGAAAGTTGAGCTTAGGAGCTAGAATTCTTCAAGTAGGTGGATTAAGAAAAATCTACAAGCAATTGTTTAATGTTGGAGATGGCGAGAAACTATTGAAGGCTGTCCACTGCTATTTGTCAACCACAGCTGGACCTATTGCAGGTCTGCTCTTCATATCCACAGCTAAGATCGCCTTCTGCAGCGACAGATCGATCAAAGTTTCTTCCCCCACCGGAGAGCTAATTCGATTCCATTACAAGGTATTGATTCCAGTAGGAAAAATAGAGAGAATCAATCAAAGTGAGAATGTGATGAAGCCTTCACAGAAGTACATGGAAATAGTTACGGTGGATAATTTTGACTTCTGGTTTATGGGGTTCTTGAAATATCGCAAAACTCTTCAATATCTTCAAGATGTGATCTATCAAGAATGCAAGAGATGCTAGATGCTTGGAGGAAGATAATGCAGCAGAAATGTTCTTTGGTTTTGATCACAATACAATCAACTCAATTGTACAAATTCTCTTGTGATTGACAAGTTATGTTCTCCACTTCTTCATCCTATTTCCTTGAAAGTTTCAAACTTTTACATTCAAAATCTCTCTCTAAGAAGATCCCACCTTTTGGATAAGCATCATCTCACCATAACATGACTTTACATGTCAATATATTGTCACCATTAGTAGTAAATCTATATTTAGATGATTGGCTTAATAAGTAAAATAAGTTTAGGCAAACGATCAC ATGGAAGCTTTACTACAGAGACATGTTATTGGATTTCCAATTGGATCATCAGTTCAGAGACTCTTACCTGATCTTGCTGGCCACTACAACATTCCATCTCCAGACAGTAAATACCCAACATTAAAACAATGTAGTAAAGATTCAATGCTTAGCAGGGTGAACAAGCTTGGTAAAAGAGCTGACAGCTTTGCTCATGGAGTCCGGGAGCATGTGAAACTAGGATCCAAGATCACAGAAACTGTCAAAGGAAAGTTGAGCTTAGGAGCTAGAATTCTTCAAGTAGGTGGATTAAGAAAAATCTACAAGCAATTGTTTAATGTTGGAGATGGCGAGAAACTATTGAAGGCTGTCCACTGCTATTTGTCAACCACAGCTGGACCTATTGCAGGTCTGCTCTTCATATCCACAGCTAAGATCGCCTTCTGCAGCGACAGATCGATCAAAGTTTCTTCCCCCACCGGAGAGCTAATTCGATTCCATTACAAGGTATTGATTCCAGTAGGAAAAATAGAGAGAATCAATCAAAGTGAGAATGTGATGAAGCCTTCACAGAAGTACATGGAAATAGTTACGGTGGATAATTTTGACTTCTGGTTTATGGGGTTCTTGAAATATCGCAAAACTCTTCAATATCTTCAAGATGTGATCTATCAAGAATGCAAGAGATGCTAG MEALLQRHVIGFPIGSSVQRLLPDLAGHYNIPSPDSKYPTLKQCSKDSMLSRVNKLGKRADSFAHGVREHVKLGSKITETVKGKLSLGARILQVGGLRKIYKQLFNVGDGEKLLKAVHCYLSTTAGPIAGLLFISTAKIAFCSDRSIKVSSPTGELIRFHYKVLIPVGKIERINQSENVMKPSQKYMEIVTVDNFDFWFMGFLKYRKTLQYLQDVIYQECKRC Homology
BLAST of CmoCh15G008230 vs. ExPASy Swiss-Prot
Match: Q9FMW4 (Putative GEM-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=At5g23370 PE=3 SV=1) HSP 1 Score: 231.1 bits (588), Expect = 1.2e-59 Identity = 124/213 (58.22%), Postives = 149/213 (69.95%), Query Frame = 0
BLAST of CmoCh15G008230 vs. ExPASy Swiss-Prot
Match: Q9FMW6 (GEM-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=At5g23350 PE=2 SV=2) HSP 1 Score: 228.4 bits (581), Expect = 7.9e-59 Identity = 122/213 (57.28%), Postives = 146/213 (68.54%), Query Frame = 0
BLAST of CmoCh15G008230 vs. ExPASy Swiss-Prot
Match: Q9FTA0 (GEM-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=At5g08350 PE=2 SV=1) HSP 1 Score: 228.0 bits (580), Expect = 1.0e-58 Identity = 119/215 (55.35%), Postives = 152/215 (70.70%), Query Frame = 0
BLAST of CmoCh15G008230 vs. ExPASy Swiss-Prot
Match: Q9FMW5 (GEM-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=At5g23360 PE=2 SV=1) HSP 1 Score: 223.4 bits (568), Expect = 2.6e-57 Identity = 119/216 (55.09%), Postives = 150/216 (69.44%), Query Frame = 0
BLAST of CmoCh15G008230 vs. ExPASy Swiss-Prot
Match: Q9M122 (GEM-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g01600 PE=2 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 1.4e-31 Identity = 72/189 (38.10%), Postives = 118/189 (62.43%), Query Frame = 0
BLAST of CmoCh15G008230 vs. ExPASy TrEMBL
Match: A0A6J1FJV6 (GEM-like protein 7 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111444694 PE=3 SV=1) HSP 1 Score: 449.5 bits (1155), Expect = 8.1e-123 Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0
BLAST of CmoCh15G008230 vs. ExPASy TrEMBL
Match: A0A6J1JTT5 (GEM-like protein 7 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111489685 PE=3 SV=1) HSP 1 Score: 442.6 bits (1137), Expect = 9.9e-121 Identity = 219/223 (98.21%), Postives = 220/223 (98.65%), Query Frame = 0
BLAST of CmoCh15G008230 vs. ExPASy TrEMBL
Match: A0A6J1FE38 (GEM-like protein 7 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444694 PE=3 SV=1) HSP 1 Score: 439.9 bits (1130), Expect = 6.4e-120 Identity = 217/218 (99.54%), Postives = 218/218 (100.00%), Query Frame = 0
BLAST of CmoCh15G008230 vs. ExPASy TrEMBL
Match: A0A6J1JXA1 (GEM-like protein 7 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489685 PE=3 SV=1) HSP 1 Score: 433.0 bits (1112), Expect = 7.8e-118 Identity = 213/218 (97.71%), Postives = 215/218 (98.62%), Query Frame = 0
BLAST of CmoCh15G008230 vs. ExPASy TrEMBL
Match: A0A5D3CUH3 (Putative GEM-like protein 8 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold790G00540 PE=3 SV=1) HSP 1 Score: 407.5 bits (1046), Expect = 3.5e-110 Identity = 205/230 (89.13%), Postives = 213/230 (92.61%), Query Frame = 0
BLAST of CmoCh15G008230 vs. NCBI nr
Match: XP_022938465.1 (GEM-like protein 7 isoform X2 [Cucurbita moschata]) HSP 1 Score: 449.5 bits (1155), Expect = 1.7e-122 Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0
BLAST of CmoCh15G008230 vs. NCBI nr
Match: XP_023550370.1 (GEM-like protein 7 [Cucurbita pepo subsp. pepo] >XP_023550371.1 GEM-like protein 7 [Cucurbita pepo subsp. pepo] >KAG6579083.1 putative GEM-like protein 8, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 446.4 bits (1147), Expect = 1.4e-121 Identity = 221/223 (99.10%), Postives = 222/223 (99.55%), Query Frame = 0
BLAST of CmoCh15G008230 vs. NCBI nr
Match: XP_022993777.1 (GEM-like protein 7 isoform X2 [Cucurbita maxima]) HSP 1 Score: 442.6 bits (1137), Expect = 2.0e-120 Identity = 219/223 (98.21%), Postives = 220/223 (98.65%), Query Frame = 0
BLAST of CmoCh15G008230 vs. NCBI nr
Match: XP_022938462.1 (GEM-like protein 7 isoform X1 [Cucurbita moschata]) HSP 1 Score: 439.9 bits (1130), Expect = 1.3e-119 Identity = 217/218 (99.54%), Postives = 218/218 (100.00%), Query Frame = 0
BLAST of CmoCh15G008230 vs. NCBI nr
Match: XP_022993776.1 (GEM-like protein 7 isoform X1 [Cucurbita maxima]) HSP 1 Score: 433.0 bits (1112), Expect = 1.6e-117 Identity = 213/218 (97.71%), Postives = 215/218 (98.62%), Query Frame = 0
BLAST of CmoCh15G008230 vs. TAIR 10
Match: AT5G23370.1 (GRAM domain-containing protein / ABA-responsive protein-related ) HSP 1 Score: 231.1 bits (588), Expect = 8.7e-61 Identity = 124/213 (58.22%), Postives = 149/213 (69.95%), Query Frame = 0
BLAST of CmoCh15G008230 vs. TAIR 10
Match: AT5G23350.1 (GRAM domain-containing protein / ABA-responsive protein-related ) HSP 1 Score: 228.4 bits (581), Expect = 5.6e-60 Identity = 122/213 (57.28%), Postives = 146/213 (68.54%), Query Frame = 0
BLAST of CmoCh15G008230 vs. TAIR 10
Match: AT5G08350.1 (GRAM domain-containing protein / ABA-responsive protein-related ) HSP 1 Score: 228.0 bits (580), Expect = 7.4e-60 Identity = 119/215 (55.35%), Postives = 152/215 (70.70%), Query Frame = 0
BLAST of CmoCh15G008230 vs. TAIR 10
Match: AT5G23360.1 (GRAM domain-containing protein / ABA-responsive protein-related ) HSP 1 Score: 223.4 bits (568), Expect = 1.8e-58 Identity = 119/216 (55.09%), Postives = 150/216 (69.44%), Query Frame = 0
BLAST of CmoCh15G008230 vs. TAIR 10
Match: AT4G01600.1 (GRAM domain family protein ) HSP 1 Score: 137.9 bits (346), Expect = 1.0e-32 Identity = 72/189 (38.10%), Postives = 118/189 (62.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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