CmoCh15G006910 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAATTCTCGTTTTCACCAGAAGATACAGAACAAGCGATTGAGCTCCATAGCGAATTAATGGCGGGGCGGACGGTGTTGAAGGAGAAGAGCAGGGCAGGAAGCTTCTTCTCCGCGACATTAGTGCTTTGGACGGTCTCTCTTTGGTTCGAAATTCTGTTCGACAGGCGCTTCGAGCTGCTCTACCTCGTATTCGGAGCTCTGTTCTACCAATCCGCCAATTCGGCCATTCGATTTCTTATTTCTAAGGAACCTCTTGTAGTCAACACCGCCGTCTCTCTCCTTCACTCTATTATCACTTCTGCTTCAGGTTCTGTGCCTACTCTTTTACCCTTTGTTGCTTGTTTTCCCTTCTACTTCTCTGTGAGTGAATTCATACCTTCAGTTGTTGTTTTTCGTCATACGTGACTGCCTTCCTTATTTACTGTTTGATTCTTTGTTTGGTGGTTACTTCTTTGGCTTGCTTGAAGGTTTAGCAATGGAATAATAAACTTTGTTTTCATTATAAGATAGACTGAGAGTTGATCGTGTTTGGTTATTGCAAGTTCTGTGTGGTAAATTGTGTGAATTATTAGGTATTAATGGTGATTGAGAGTTTGCAAGTGTGCTATTGTTTCTGGAAATCGGGATGTGGTTCAGTGCGTGTGCTACAGTGGGTTGTTTGAGACAATGAACCAAGCGCAAATGAATTTTTTGGAGTCCTTTTACAGCACCAAGAATATTTAGAGTTTGTTCTTTACTCCTGTAGCATTACTTTGGTCAAATTATAACACTAAACCCCAATTTTTAAGCCTAAGTTCTTGAATTTTAAATGAGATTTAGAAATAGTTAATATTACCTTTTGTTATATCCAAAATCAATCCGAAATAACTTAAAATCAATTCAAATGATATGAAAATGGTGATTGGAAGTGTAAATCAAACATTAAATTGATTTTGAATGATTAAATGCTTGATTTGGAGTGATTTTGAACATGACAAAAGTGCACTAAGTTGTCTTCCTCACACGAATTCGGTTAAAATTAATTCAGTCGACAAAAACTAAACAAAATAAATTTTAAATTTAGATACAGATCAGTCTAGAGGGCCATCCGTAGGACCTGTTAATCATAATGAAGATCTCTAACCTCAATACTCGTTTAAATCAAACAGGTCATTGTCATCTTGCTACACTACATAAAACAGTCTAACCCTGACTATTATGTGCTTGAAGGTTGTTTCTCAACCAAGAAAATGTCTAAAAACTCATGAATGATAAGAGAGATTCTCTCCTGGTTTCATTAGCAACTTCTTTGTATTGTTGAAGGTTGAGGAAAGCCTAAAGGAAAACTAACTATTTAATTGCCAGGGGAAAGGCTGCTAGGTTGGCCTTGGTTGCCACTTTATTCCAACCCAAAGGGCTTTTATTTTCTGAATTTCAATAGTTAATCCTATTCTTTGGGCCATCTAGTTAAGTCATCTTTATTTAATTGCAGTGTTGTTTGTTTTGGCAAATCGGTGGTTGAGTCATGGTTCGGACGGGATGTTTGAGCATTCACAGTTGTTTGGAGGAACATGGCCGTGGGCTTATGCAGCTTTGTGCTTCTCATGTGGTTATTTTGCATATGATCAGTGGGATATGCTGCAATACCGATTATACAGTGGCTGGATCCCTGCCATCTTGGTTCATCATCTGGTTCTCCTGATTTGCTTTACACTTGCTTTGTATAGGAATGTCACCATCAATTATCTCATTCTCACTCTCATTTGCGAGGTATGCATTAGTTTCTTCTTGCAAGATGTGCCTTATGAATAGCTGCTTTCTTTCTTTTTGTTTGTGGTTCTTTCTGGGTCTTTGCATCTCCGTTACCTTCATTGATATGGATCACGACGATGAAGGGTTTAATCACTTTGACATAGACACAAACATGAATTCCGAGTATTTTGCAAGCTTATCTGATAAGTCGTTTTTCAAAGAAACGTAATAGATAGATACTTTATCTAGTGTTGTTGGCTTGAACCGTCCTCATTCTCTTGTGGCACCTACTTTCTTTTTCTGACTTCTTTTTATAGCACTTTCTCCCACTAACTTCTCTTTCCATTCACGTTTTCACGTTGATCTCCCTCTTCACACAGTTTCTATCACTTTACACTCTGTCTTAGTTAACCATTCTCTTACTAGCTCTCTCCATGTGTAGACTTCTCATGACTAGTCTCTCTTTGTATATATCTTCGGTTATGAATCTATTTCTACACAATTTGTGAGATTCCACGTTGGAGAGGAGAACAAATCATTTTTATAAGAGTGTGGAAACCTCTATCCTTAGCAGACGCGTTTTAAAACTTTGAGGGGAAGCTCAGAAGGGAAAGCCTAAAGATGACAATATCTGCTAGCGGTGGGCTTGAGCTGTTATTATGGTATCAAAGTCAGACACCAGACGATGTGCTAGCGAGGATGCTGAATCTCGAAGGGGGGAGGACACCAGGTGGTGTGCCACCACCGAGGACGTTGGGCACCTAGGGGGGTGGATTGGGGGTCCCACATTGATTGGAGAAGAGAACGAGTGCCAGCGAGGACGTTGGGCCCCGAAGCCGAGGGGGGTGGATTGTGAGATCCCACATCTATTGGAGAGCGGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTGGCATACCGGTTTTAAAACCTTGGGCTGTTACACAACTTCTCCTACTAAGGTCACTCTACACACCTCTCACTAATTTTCTTTATTAATTTATTGATATGGAGATGCACACACATACACCCATATGTAATGCTCAAATCAAAGAGCATGCCTTCTTTGGGGTAAAAAACAGTCATCTTAGTTAGCAACTGCAAGATTAGAGCTTGTAGTTTCTTTGCACGTTTGGAAGGACTCTGGAAGCCAATCACATCTATTCTTAGAATCAAATCAAGTTTTCATGTTAAATTTGACTTCCAGCTTTTGATCTGCAAAACTGAAACAAGAATCATTGTGATATTTCAGCTGCATTCTATCTTCCTCCACGTAAGGCGATTGCGACGGATGGCTGGTGTTCGTGACGCCGAGAGCTTTATCGTGAAAGTCGAATGGACTCTGAACTGGCTAACGTTCACTTTCGCAAGGTTTGTACCTCACATTCTCATTACTGCTAAGCTCATCATGGATGCTTCCAAGTTTGATAAAGGCGTAGAGCTGCCGCTTGCACTGTTTGGGATGGCTGCCATGAACTTGCTGAATGTTTTTCTTGGCATTGATCTCTTCAACGCTGTAAAGAAAGAGAGTAATTATCAGAAAAATGATCATCTTCATCATGAATGAAGGCCAACATGGTGGAAATTGTATTTGTTCTTTGTATTATATTGTAAGAAAATGCTGAACAGAAAACGGTTCAGGATAAATTTATGTAACACTGAAGACAAATTTGTGTAAAATCAGTTTAATATTTAGTTAAAGAAATTTAGTACTA CAATTCTCGTTTTCACCAGAAGATACAGAACAAGCGATTGAGCTCCATAGCGAATTAATGGCGGGGCGGACGGTGTTGAAGGAGAAGAGCAGGGCAGGAAGCTTCTTCTCCGCGACATTAGTGCTTTGGACGGTCTCTCTTTGGTTCGAAATTCTGTTCGACAGGCGCTTCGAGCTGCTCTACCTCGTATTCGGAGCTCTGTTCTACCAATCCGCCAATTCGGCCATTCGATTTCTTATTTCTAAGGAACCTCTTGTAGTCAACACCGCCGTCTCTCTCCTTCACTCTATTATCACTTCTGCTTCAGTGTTGTTTGTTTTGGCAAATCGGTGGTTGAGTCATGGTTCGGACGGGATGTTTGAGCATTCACAGTTGTTTGGAGGAACATGGCCGTGGGCTTATGCAGCTTTGTGCTTCTCATGTGGTTATTTTGCATATGATCAGTGGGATATGCTGCAATACCGATTATACAGTGGCTGGATCCCTGCCATCTTGGTTCATCATCTGGTTCTCCTGATTTGCTTTACACTTGCTTTGTATAGGAATGTCACCATCAATTATCTCATTCTCACTCTCATTTGCGAGCTGCATTCTATCTTCCTCCACGTAAGGCGATTGCGACGGATGGCTGGTGTTCGTGACGCCGAGAGCTTTATCGTGAAAGTCGAATGGACTCTGAACTGGCTAACGTTCACTTTCGCAAGGTTTGTACCTCACATTCTCATTACTGCTAAGCTCATCATGGATGCTTCCAAGTTTGATAAAGGCGTAGAGCTGCCGCTTGCACTGTTTGGGATGGCTGCCATGAACTTGCTGAATGTTTTTCTTGGCATTGATCTCTTCAACGCTGTAAAGAAAGAGAGTAATTATCAGAAAAATGATCATCTTCATCATGAATGAAGGCCAACATGGTGGAAATTGTATTTGTTCTTTGTATTATATTGTAAGAAAATGCTGAACAGAAAACGGTTCAGGATAAATTTATGTAACACTGAAGACAAATTTGTGTAAAATCAGTTTAATATTTAGTTAAAGAAATTTAGTACTA ATGGCGGGGCGGACGGTGTTGAAGGAGAAGAGCAGGGCAGGAAGCTTCTTCTCCGCGACATTAGTGCTTTGGACGGTCTCTCTTTGGTTCGAAATTCTGTTCGACAGGCGCTTCGAGCTGCTCTACCTCGTATTCGGAGCTCTGTTCTACCAATCCGCCAATTCGGCCATTCGATTTCTTATTTCTAAGGAACCTCTTGTAGTCAACACCGCCGTCTCTCTCCTTCACTCTATTATCACTTCTGCTTCAGTGTTGTTTGTTTTGGCAAATCGGTGGTTGAGTCATGGTTCGGACGGGATGTTTGAGCATTCACAGTTGTTTGGAGGAACATGGCCGTGGGCTTATGCAGCTTTGTGCTTCTCATGTGGTTATTTTGCATATGATCAGTGGGATATGCTGCAATACCGATTATACAGTGGCTGGATCCCTGCCATCTTGGTTCATCATCTGGTTCTCCTGATTTGCTTTACACTTGCTTTGTATAGGAATGTCACCATCAATTATCTCATTCTCACTCTCATTTGCGAGCTGCATTCTATCTTCCTCCACGTAAGGCGATTGCGACGGATGGCTGGTGTTCGTGACGCCGAGAGCTTTATCGTGAAAGTCGAATGGACTCTGAACTGGCTAACGTTCACTTTCGCAAGGTTTGTACCTCACATTCTCATTACTGCTAAGCTCATCATGGATGCTTCCAAGTTTGATAAAGGCGTAGAGCTGCCGCTTGCACTGTTTGGGATGGCTGCCATGAACTTGCTGAATGTTTTTCTTGGCATTGATCTCTTCAACGCTGTAAAGAAAGAGAGTAATTATCAGAAAAATGATCATCTTCATCATGAATGA MAGRTVLKEKSRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSANSAIRFLISKEPLVVNTAVSLLHSIITSASVLFVLANRWLSHGSDGMFEHSQLFGGTWPWAYAALCFSCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELHSIFLHVRRLRRMAGVRDAESFIVKVEWTLNWLTFTFARFVPHILITAKLIMDASKFDKGVELPLALFGMAAMNLLNVFLGIDLFNAVKKESNYQKNDHLHHE Homology
BLAST of CmoCh15G006910 vs. ExPASy Swiss-Prot
Match: A8WGS4 (TLC domain-containing protein 2 OS=Danio rerio OX=7955 GN=tlcd2 PE=2 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 6.8e-07 Identity = 50/190 (26.32%), Postives = 94/190 (49.47%), Query Frame = 0
BLAST of CmoCh15G006910 vs. ExPASy Swiss-Prot
Match: A6NGC4 (TLC domain-containing protein 2 OS=Homo sapiens OX=9606 GN=TLCD2 PE=3 SV=3) HSP 1 Score: 49.7 bits (117), Expect = 6.3e-05 Identity = 54/197 (27.41%), Postives = 92/197 (46.70%), Query Frame = 0
BLAST of CmoCh15G006910 vs. ExPASy Swiss-Prot
Match: Q8VC26 (TLC domain-containing protein 2 OS=Mus musculus OX=10090 GN=Tlcd2 PE=2 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 1.1e-04 Identity = 45/152 (29.61%), Postives = 74/152 (48.68%), Query Frame = 0
BLAST of CmoCh15G006910 vs. ExPASy TrEMBL
Match: A0A6J1FID3 (TLC domain-containing protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111445599 PE=4 SV=1) HSP 1 Score: 551.6 bits (1420), Expect = 1.9e-153 Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 0
BLAST of CmoCh15G006910 vs. ExPASy TrEMBL
Match: A0A6J1K0R9 (TLC domain-containing protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111489133 PE=4 SV=1) HSP 1 Score: 542.0 bits (1395), Expect = 1.5e-150 Identity = 274/280 (97.86%), Postives = 276/280 (98.57%), Query Frame = 0
BLAST of CmoCh15G006910 vs. ExPASy TrEMBL
Match: A0A0A0KH54 (TLC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G385110 PE=4 SV=1) HSP 1 Score: 483.0 bits (1242), Expect = 8.3e-133 Identity = 245/282 (86.88%), Postives = 262/282 (92.91%), Query Frame = 0
BLAST of CmoCh15G006910 vs. ExPASy TrEMBL
Match: A0A1S3CRX5 (TLC domain-containing protein 2 OS=Cucumis melo OX=3656 GN=LOC103504058 PE=4 SV=1) HSP 1 Score: 482.3 bits (1240), Expect = 1.4e-132 Identity = 242/282 (85.82%), Postives = 261/282 (92.55%), Query Frame = 0
BLAST of CmoCh15G006910 vs. ExPASy TrEMBL
Match: A0A6J1CKF5 (TLC domain-containing protein 2 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111011955 PE=4 SV=1) HSP 1 Score: 459.9 bits (1182), Expect = 7.5e-126 Identity = 235/280 (83.93%), Postives = 251/280 (89.64%), Query Frame = 0
BLAST of CmoCh15G006910 vs. NCBI nr
Match: XP_022939854.1 (TLC domain-containing protein 2 [Cucurbita moschata] >KAG6578966.1 TLC domain-containing protein 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016488.1 TLC domain-containing protein 2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 551.6 bits (1420), Expect = 3.9e-153 Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 0
BLAST of CmoCh15G006910 vs. NCBI nr
Match: XP_023550889.1 (TLC domain-containing protein 2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 543.9 bits (1400), Expect = 8.2e-151 Identity = 276/280 (98.57%), Postives = 278/280 (99.29%), Query Frame = 0
BLAST of CmoCh15G006910 vs. NCBI nr
Match: XP_022992953.1 (TLC domain-containing protein 2 [Cucurbita maxima]) HSP 1 Score: 542.0 bits (1395), Expect = 3.1e-150 Identity = 274/280 (97.86%), Postives = 276/280 (98.57%), Query Frame = 0
BLAST of CmoCh15G006910 vs. NCBI nr
Match: XP_038884583.1 (TLC domain-containing protein 2 [Benincasa hispida]) HSP 1 Score: 494.2 bits (1271), Expect = 7.4e-136 Identity = 249/280 (88.93%), Postives = 264/280 (94.29%), Query Frame = 0
BLAST of CmoCh15G006910 vs. NCBI nr
Match: XP_004150440.1 (TLC domain-containing protein 2 [Cucumis sativus] >KGN47727.1 hypothetical protein Csa_018230 [Cucumis sativus]) HSP 1 Score: 483.0 bits (1242), Expect = 1.7e-132 Identity = 245/282 (86.88%), Postives = 262/282 (92.91%), Query Frame = 0
BLAST of CmoCh15G006910 vs. TAIR 10
Match: AT1G21790.1 (TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein ) HSP 1 Score: 370.2 bits (949), Expect = 1.5e-102 Identity = 187/273 (68.50%), Postives = 226/273 (82.78%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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