CmoCh15G006130 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGTATTCGACGGCCAATCTAATGTTTGGTATTTTGGTAGCATCCATCGCTCTAAGGCTGCCGTTGGAAGCCAGGGCAAGCGCCATGGTTGGCCCTTCTCCTCTGCCACCGCCGACATGCCATTCACCTTCTGGGCAGCTATTATTTCGCCGCCCCATAAAGGTTAGCCTTACAGTGAAGGCTAGTGGAGAAGATGAAGCTGAAGCACCATCGTCCAAGGATGAAAAGGGTGGCAGAAAACCATGGCCAAAGCAACCTGTCCCTAAAGCGCCACCACCTCCATTTTAG ATGGGGTATTCGACGGCCAATCTAATGTTTGCATCCATCGCTCTAAGGCTGCCGTTGGAAGCCAGGGCAAGCGCCATGGTTGGCCCTTCTCCTCTGCCACCGCCGACATGCCATTCACCTTCTGGGCAGCTATTATTTCGCCGCCCCATAAAGGTTAGCCTTACAGTGAAGGCTAGTGGAGAAGATGAAGCTGAAGCACCATCGTCCAAGGATGAAAAGGGTGGCAGAAAACCATGGCCAAAGCAACCTGTCCCTAAAGCGCCACCACCTCCATTTTAG ATGGGGTATTCGACGGCCAATCTAATGTTTGCATCCATCGCTCTAAGGCTGCCGTTGGAAGCCAGGGCAAGCGCCATGGTTGGCCCTTCTCCTCTGCCACCGCCGACATGCCATTCACCTTCTGGGCAGCTATTATTTCGCCGCCCCATAAAGGTTAGCCTTACAGTGAAGGCTAGTGGAGAAGATGAAGCTGAAGCACCATCGTCCAAGGATGAAAAGGGTGGCAGAAAACCATGGCCAAAGCAACCTGTCCCTAAAGCGCCACCACCTCCATTTTAG MGYSTANLMFASIALRLPLEARASAMVGPSPLPPPTCHSPSGQLLFRRPIKVSLTVKASGEDEAEAPSSKDEKGGRKPWPKQPVPKAPPPPF Homology
BLAST of CmoCh15G006130 vs. ExPASy TrEMBL
Match: A0A0A0K9K2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G058720 PE=4 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 1.2e-08 Identity = 49/102 (48.04%), Postives = 61/102 (59.80%), Query Frame = 0
BLAST of CmoCh15G006130 vs. ExPASy TrEMBL
Match: A0A5A7UIB8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00190 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 1.1e-06 Identity = 46/102 (45.10%), Postives = 59/102 (57.84%), Query Frame = 0
BLAST of CmoCh15G006130 vs. NCBI nr
Match: KAG6578898.1 (hypothetical protein SDJN03_23346, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 172.2 bits (435), Expect = 2.1e-39 Identity = 91/96 (94.79%), Postives = 91/96 (94.79%), Query Frame = 0
BLAST of CmoCh15G006130 vs. NCBI nr
Match: KAG6578899.1 (hypothetical protein SDJN03_23347, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 100.5 bits (249), Expect = 7.9e-18 Identity = 63/103 (61.17%), Postives = 72/103 (69.90%), Query Frame = 0
BLAST of CmoCh15G006130 vs. NCBI nr
Match: KAA0054914.1 (hypothetical protein E6C27_scaffold43052G00420 [Cucumis melo var. makuwa] >TYK22702.1 hypothetical protein E5676_scaffold1163G00190 [Cucumis melo var. makuwa]) HSP 1 Score: 62.4 bits (150), Expect = 2.4e-06 Identity = 46/102 (45.10%), Postives = 59/102 (57.84%), Query Frame = 0
BLAST of CmoCh15G006130 vs. NCBI nr
Match: KAE8646678.1 (hypothetical protein Csa_023589, partial [Cucumis sativus]) HSP 1 Score: 62.0 bits (149), Expect = 3.1e-06 Identity = 42/86 (48.84%), Postives = 52/86 (60.47%), Query Frame = 0
BLAST of CmoCh15G006130 vs. NCBI nr
Match: KAE8637368.1 (hypothetical protein CSA_004461, partial [Cucumis sativus]) HSP 1 Score: 56.2 bits (134), Expect = 1.7e-04 Identity = 42/93 (45.16%), Postives = 53/93 (56.99%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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