CmoCh15G006090 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh15G006090
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	Cmo_Chr15: 2958942 .. 2960043 (-)
RNA-Seq Expression	CmoCh15G006090
Synteny	CmoCh15G006090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCAACTTCTGGTGCTGTGCTTAATGGGTTGGGCTCACCCTTCCTCCATGGCGGAAGCAGAACTCAGACCTTGCTGGCTGGAGCCAGAGGCGGTGTCAATGTCGTTGGCTCTCGCAAGCTTGTCATCGTCGCCGCTGCTCAGCCCAAGAAGTCTTGGATCCCTGCTGTTAAGGGCGGAGGCAACTTAGTCGACCCAGAATGGCTAGATGGCTCGTATGTCTCTCGCTTACTTTCTTCTAGTTGCACTTTTTTTAGTTACTGTCTAAAAGCTGATTGAGGCATTTCATCGAACACCTCCTAAGCAATTACTTGTTCCGTTTGCGTAGACTTCCAGGTGACTTCGGCTTCGACCCATTAGGGTTGGGGAAGGACCCTGCATTTCTGAAATGGTACAGAGAGGCAGAGCTGATCCACGGCCGGTGGGCAATGGCAGCGGTGGTCGGAATCTTCGTAGGCCAAGCCTGGAGTGGGATCCCATGGTTCGAAGCCGGAGCCGATCCAGGCGCAATTGCTCCATTCTCCTTCGGATCACTTCTCGGAACCCAGCTTCTACTAATGGGATGGGTGGAGAGCAAGCGGTGGGTGGATTTCTTCAACCCAGAGTCTCAATCGGTGGAATGGGCGACGCCATGGTCGAGGACGGCAGAGAACTTCGCAAACGCAACGGGAGAACAGGGTTATCCCGGCGGAAAATTCTTCGATCCGTTGGGATTTGCCGGAACTATTAAAGATGGGGTTTACATTCCGGACACGGACAAATTGGAGAGATTGAAGTTGGCTGAGATCAAGCATGCTAGGATCGCCATGTTAGCGATGCTCATCTTCTACTTTGAAGCTGGACAGGGGAAGACGCCATTGGGGGCTCTTGGAGTATAAGGAAAAATGTTGTTGATTTTAAGGTAAAATTGTTCATAATTTCACTAGAAAAAAAAAATGGAGACACTGTGTTGATTGCCATTTCCAAGTCTGCCCTTTGCCTTATTTCAACTCGGTTATACAAGAACGTTGAAACTCGTCTCACTAAATGCGTTTTAAAAATTGTGAGGCCGACGACTATGCATAACGAACCAAATTGGATAATATCTACTAGTGGTGGC

mRNA sequence

ATGGCTGCAACTTCTGGTGCTGTGCTTAATGGGTTGGGCTCACCCTTCCTCCATGGCGGAAGCAGAACTCAGACCTTGCTGGCTGGAGCCAGAGGCGGTGTCAATGTCGTTGGCTCTCGCAAGCTTGTCATCGTCGCCGCTGCTCAGCCCAAGAAGTCTTGGATCCCTGCTGTTAAGGGCGGAGGCAACTTAGTCGACCCAGAATGGCTAGATGGCTCACTTCCAGGTGACTTCGGCTTCGACCCATTAGGGTTGGGGAAGGACCCTGCATTTCTGAAATGGTACAGAGAGGCAGAGCTGATCCACGGCCGGTGGGCAATGGCAGCGGTGGTCGGAATCTTCGTAGGCCAAGCCTGGAGTGGGATCCCATGGTTCGAAGCCGGAGCCGATCCAGGCGCAATTGCTCCATTCTCCTTCGGATCACTTCTCGGAACCCAGCTTCTACTAATGGGATGGGTGGAGAGCAAGCGGTGGGTGGATTTCTTCAACCCAGAGTCTCAATCGGTGGAATGGGCGACGCCATGGTCGAGGACGGCAGAGAACTTCGCAAACGCAACGGGAGAACAGGGTTATCCCGGCGGAAAATTCTTCGATCCGTTGGGATTTGCCGGAACTATTAAAGATGGGGTTTACATTCCGGACACGGACAAATTGGAGAGATTGAAGTTGGCTGAGATCAAGCATGCTAGGATCGCCATGTTAGCGATGCTCATCTTCTACTTTGAAGCTGGACAGGGGAAGACGCCATTGGGGGCTCTTGGAGTATAAGGAAAAATGTTGTTGATTTTAAGGTAAAATTGTTCATAATTTCACTAGAAAAAAAAAATGGAGACACTGTGTTGATTGCCATTTCCAAGTCTGCCCTTTGCCTTATTTCAACTCGGTTATACAAGAACGTTGAAACTCGTCTCACTAAATGCGTTTTAAAAATTGTGAGGCCGACGACTATGCATAACGAACCAAATTGGATAATATCTACTAGTGGTGGC

Coding sequence (CDS)

ATGGCTGCAACTTCTGGTGCTGTGCTTAATGGGTTGGGCTCACCCTTCCTCCATGGCGGAAGCAGAACTCAGACCTTGCTGGCTGGAGCCAGAGGCGGTGTCAATGTCGTTGGCTCTCGCAAGCTTGTCATCGTCGCCGCTGCTCAGCCCAAGAAGTCTTGGATCCCTGCTGTTAAGGGCGGAGGCAACTTAGTCGACCCAGAATGGCTAGATGGCTCACTTCCAGGTGACTTCGGCTTCGACCCATTAGGGTTGGGGAAGGACCCTGCATTTCTGAAATGGTACAGAGAGGCAGAGCTGATCCACGGCCGGTGGGCAATGGCAGCGGTGGTCGGAATCTTCGTAGGCCAAGCCTGGAGTGGGATCCCATGGTTCGAAGCCGGAGCCGATCCAGGCGCAATTGCTCCATTCTCCTTCGGATCACTTCTCGGAACCCAGCTTCTACTAATGGGATGGGTGGAGAGCAAGCGGTGGGTGGATTTCTTCAACCCAGAGTCTCAATCGGTGGAATGGGCGACGCCATGGTCGAGGACGGCAGAGAACTTCGCAAACGCAACGGGAGAACAGGGTTATCCCGGCGGAAAATTCTTCGATCCGTTGGGATTTGCCGGAACTATTAAAGATGGGGTTTACATTCCGGACACGGACAAATTGGAGAGATTGAAGTTGGCTGAGATCAAGCATGCTAGGATCGCCATGTTAGCGATGCTCATCTTCTACTTTGAAGCTGGACAGGGGAAGACGCCATTGGGGGCTCTTGGAGTATAA

Protein sequence

MAATSGAVLNGLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGV

Homology

[Close]

BLAST of CmoCh15G006090 vs. ExPASy Swiss-Prot
Match: P27524 (Chlorophyll a-b binding protein CP24 10A, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAP10A PE=3 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 2.6e-122
Identity = 213/258 (82.56%), Postives = 232/258 (89.92%), Query Frame = 0


Query: 1   MAATSGAVLNGLGSPFLHGGSRTQTLLA---GARGGVNVVGSRKLVIVAAAQPKKSWIPA 60
           MA TS AVLNGL S FL GG+++Q LLA    AR G      R  V+ AAA  KKSWIPA
Sbjct: 1   MATTSAAVLNGLSSSFLTGGNKSQALLAAPLAARVGGAATPKRFTVLAAAA--KKSWIPA 60

Query: 61  VKGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ 120
           V+GGGNLVDPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAELIHGRWAMAAV+GIFVGQ
Sbjct: 61  VRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQ 120

Query: 121 AWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSR 180
           AWSGIPWFEAGADPGAIAPFSFG+LLGTQL+LMGWVESKRWVDFF+P+SQSVEWATPWS+
Sbjct: 121 AWSGIPWFEAGADPGAIAPFSFGTLLGTQLILMGWVESKRWVDFFDPDSQSVEWATPWSK 180

Query: 181 TAENFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAML 240
           TAENFAN TGEQGYPGGKFFDPL  AGT+ +GVY+PDT+KLERLK+AEIKHAR+AMLAML
Sbjct: 181 TAENFANFTGEQGYPGGKFFDPLALAGTLNNGVYVPDTEKLERLKVAEIKHARLAMLAML 240

Query: 241 IFYFEAGQGKTPLGALGV 256
           IFYFEAGQGKTPLGALG+
Sbjct: 241 IFYFEAGQGKTPLGALGL 256

[Close]

BLAST of CmoCh15G006090 vs. ExPASy Swiss-Prot
Match: P36494 (Chlorophyll a-b binding protein CP24, chloroplastic OS=Spinacia oleracea OX=3562 PE=2 SV=1)

HSP 1 Score: 435.6 bits (1119), Expect = 3.7e-121
Identity = 210/259 (81.08%), Postives = 232/259 (89.58%), Query Frame = 0


Query: 2   AATSG-AVLNGLGSPFLHGGSR-TQTLL---AGARGGVNVVGSRKLVIVAAAQPKKSWIP 61
           AATS  A++NG  SPFL GG + +Q+LL   +    GV+    + +V+ AAA PKKSWIP
Sbjct: 3   AATSATAIVNGFTSPFLSGGKKSSQSLLFVNSKVGAGVSTTSRKLVVVAAAAAPKKSWIP 62

Query: 62  AVKGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVG 121
           AVKGGGN +DPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAM AV+GIFVG
Sbjct: 63  AVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMLAVLGIFVG 122

Query: 122 QAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWS 181
           QAW+GIPWFEAGADPGA+APFSFG+LLGTQLLLMGWVESKRWVDFF+P+SQSVEWATPWS
Sbjct: 123 QAWTGIPWFEAGADPGAVAPFSFGTLLGTQLLLMGWVESKRWVDFFDPDSQSVEWATPWS 182

Query: 182 RTAENFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAM 241
           RTAENF+N+TGEQGYPGGKFFDPL  AGTI +GVY PDTDKLERLKLAEIKHAR+AMLAM
Sbjct: 183 RTAENFSNSTGEQGYPGGKFFDPLSLAGTISNGVYNPDTDKLERLKLAEIKHARLAMLAM 242

Query: 242 LIFYFEAGQGKTPLGALGV 256
           LIFYFEAGQGKTPLGALG+
Sbjct: 243 LIFYFEAGQGKTPLGALGL 261

[Close]

BLAST of CmoCh15G006090 vs. ExPASy Swiss-Prot
Match: P27525 (Chlorophyll a-b binding protein CP24 10B, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAP10B PE=3 SV=1)

HSP 1 Score: 435.3 bits (1118), Expect = 4.9e-121
Identity = 212/257 (82.49%), Postives = 229/257 (89.11%), Query Frame = 0


Query: 1   MAATSG-AVLNGLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVIVAAA-QPKKSWIPAV 60
           M  TS  AVLNGL S FL GG +TQ LL GA     V   ++ V+ AAA  PKKSWIPAV
Sbjct: 1   MTTTSATAVLNGLSSSFLTGGKKTQALL-GAHVTARVTTPKRFVVAAAAVAPKKSWIPAV 60

Query: 61  KGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQA 120
           K GGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV+GIFVGQA
Sbjct: 61  KSGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQA 120

Query: 121 WSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRT 180
           WSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFF+ +SQS++WATPWS+T
Sbjct: 121 WSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFDNDSQSIDWATPWSKT 180

Query: 181 AENFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLI 240
           AENFAN TGEQGYPGGKFFDPL  AGT+ +GVY+PDT+KLERLKLAEIKH+R+AMLAMLI
Sbjct: 181 AENFANFTGEQGYPGGKFFDPLALAGTLNNGVYVPDTEKLERLKLAEIKHSRLAMLAMLI 240

Query: 241 FYFEAGQGKTPLGALGV 256
           FYFEAGQGKTPLGALG+
Sbjct: 241 FYFEAGQGKTPLGALGL 256

[Close]

BLAST of CmoCh15G006090 vs. ExPASy Swiss-Prot
Match: Q8LCQ4 (Photosystem I chlorophyll a/b-binding protein 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA6 PE=1 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 2.8e-31
Identity = 78/180 (43.33%), Postives = 103/180 (57.22%), Query Frame = 0


Query: 67  PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFE 126
           PEWLDGSLPGDFGFDPLGLG DP  LKW+ +AELIH RWAM AV GI + +    + + E
Sbjct: 75  PEWLDGSLPGDFGFDPLGLGSDPDTLKWFAQAELIHSRWAMLAVTGIIIPECLERLGFIE 134

Query: 127 --AGADPGAIAPFSFG-SLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFA 186
             +  D G+   F+   +L   Q++LMGW E +RW D   P S  +E   P      +  
Sbjct: 135 NFSWYDAGSREYFADSTTLFVAQMVLMGWAEGRRWADLIKPGSVDIEPKYP------HKV 194

Query: 187 NATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFYFEA 244
           N   + GYPGG +FD + +     + V +        L+  EIK+ R+AMLA L F F+A
Sbjct: 195 NPKPDVGYPGGLWFDFMMWGRGSPEPVMV--------LRTKEIKNGRLAMLAFLGFCFQA 240

[Close]

BLAST of CmoCh15G006090 vs. ExPASy Swiss-Prot
Match: P13869 (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida OX=4102 PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 4.7e-31
Identity = 89/246 (36.18%), Postives = 124/246 (50.41%), Query Frame = 0


Query: 5   SGAVLNGLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVI--VAAAQPKKSWIPAVKGGG 64
           +G+++    + FL GG R +         +  VGSR + +  VAA   +  W P      
Sbjct: 23  NGSIVGATKASFL-GGKRLR-----VSKFIAPVGSRSVAVSAVAADPDRPLWFP------ 82

Query: 65  NLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGI 124
               PEWLDGSLPGDFGFDPLGLG DP  LKW  +AEL+H RWAM    GIF+ +  + I
Sbjct: 83  GSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKI 142

Query: 125 ------PWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWS 184
                  W+ AG            +L   +L+L+GW E +RW D   P   + +   P  
Sbjct: 143 GVLNTPSWYTAGEQEYFT---DTTTLFVIELVLIGWAEGRRWADIIKPGCVNTDPIFP-- 202

Query: 185 RTAENFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAM 243
               N    T + GYPGG +FDPLG+              K++ L+  EIK+ R+AMLA+
Sbjct: 203 ---NNKLTGT-DVGYPGGLWFDPLGWGS--------GSPAKIKELRTKEIKNGRLAMLAV 239

[Close]

BLAST of CmoCh15G006090 vs. ExPASy TrEMBL
Match: A0A6J1FGC5 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111445242 PE=3 SV=1)

HSP 1 Score: 526.2 bits (1354), Expect = 7.8e-146
Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 0


Query: 1   MAATSGAVLNGLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKG 60
           MAATSGAVLNGLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKG
Sbjct: 1   MAATSGAVLNGLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKG 60

Query: 61  GGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS 120
           GGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS
Sbjct: 61  GGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS 120

Query: 121 GIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 180
           GIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE
Sbjct: 121 GIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 180

Query: 181 NFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFY 240
           NFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFY
Sbjct: 181 NFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFY 240

Query: 241 FEAGQGKTPLGALGV 256
           FEAGQGKTPLGALGV
Sbjct: 241 FEAGQGKTPLGALGV 255

[Close]

BLAST of CmoCh15G006090 vs. ExPASy TrEMBL
Match: A0A6J1JU87 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111489772 PE=3 SV=1)

HSP 1 Score: 521.5 bits (1342), Expect = 1.9e-144
Identity = 253/255 (99.22%), Postives = 254/255 (99.61%), Query Frame = 0


Query: 1   MAATSGAVLNGLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKG 60
           MAATSGAVLNGLGSPFL GGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKG
Sbjct: 1   MAATSGAVLNGLGSPFLRGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKG 60

Query: 61  GGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS 120
           GGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS
Sbjct: 61  GGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS 120

Query: 121 GIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 180
           GIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE
Sbjct: 121 GIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 180

Query: 181 NFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFY 240
           NFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDT+KLERLKLAEIKHARIAMLAMLIFY
Sbjct: 181 NFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFY 240

Query: 241 FEAGQGKTPLGALGV 256
           FEAGQGKTPLGALGV
Sbjct: 241 FEAGQGKTPLGALGV 255

[Close]

BLAST of CmoCh15G006090 vs. ExPASy TrEMBL
Match: A0A6J1JEC2 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111486120 PE=3 SV=1)

HSP 1 Score: 513.5 bits (1321), Expect = 5.2e-142
Identity = 245/255 (96.08%), Postives = 252/255 (98.82%), Query Frame = 0


Query: 1   MAATSGAVLNGLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKG 60
           MAATSGA+LNGLGSPFLHGGSRTQTLLAGARGGVNVV SRKLVIVAAAQPKKSWIPAVKG
Sbjct: 1   MAATSGALLNGLGSPFLHGGSRTQTLLAGARGGVNVVSSRKLVIVAAAQPKKSWIPAVKG 60

Query: 61  GGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS 120
           GGN +DPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIF+GQAWS
Sbjct: 61  GGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAWS 120

Query: 121 GIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 180
           GIPWFEAGADP AIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE
Sbjct: 121 GIPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 180

Query: 181 NFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFY 240
           NFANATGEQGYPGGKFFDPLGFAGT+KDGVYIPDT+KLERLKLAEIKHARIAMLAMLIFY
Sbjct: 181 NFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFY 240

Query: 241 FEAGQGKTPLGALGV 256
           FEAGQGKTPLGALG+
Sbjct: 241 FEAGQGKTPLGALGL 255

[Close]

BLAST of CmoCh15G006090 vs. ExPASy TrEMBL
Match: D1MWY9 (Chlorophyll a-b binding protein, chloroplastic OS=Citrullus lanatus subsp. vulgaris OX=260674 GN=CitLhc PE=2 SV=1)

HSP 1 Score: 511.9 bits (1317), Expect = 1.5e-141
Identity = 245/255 (96.08%), Postives = 251/255 (98.43%), Query Frame = 0


Query: 1   MAATSGAVLNGLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKG 60
           MAATSG VLNGLGSPFL GGSRTQTLLAGARGGVNVVGSRKLV+VAAAQPKKSWIPAVKG
Sbjct: 1   MAATSGTVLNGLGSPFLRGGSRTQTLLAGARGGVNVVGSRKLVVVAAAQPKKSWIPAVKG 60

Query: 61  GGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS 120
           GGNL+DPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS
Sbjct: 61  GGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS 120

Query: 121 GIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 180
           GIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQ+VEWATPW RTAE
Sbjct: 121 GIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQAVEWATPWLRTAE 180

Query: 181 NFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFY 240
           NFAN TGEQGYPGGKFFDPLGFAGTIKDGVYIPDT+KLERLKLAEIKHARIAMLAMLIFY
Sbjct: 181 NFANTTGEQGYPGGKFFDPLGFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFY 240

Query: 241 FEAGQGKTPLGALGV 256
           FEAGQGKTPLGALG+
Sbjct: 241 FEAGQGKTPLGALGL 255

[Close]

BLAST of CmoCh15G006090 vs. ExPASy TrEMBL
Match: A0A6J1EIR2 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111434638 PE=3 SV=1)

HSP 1 Score: 511.5 bits (1316), Expect = 2.0e-141
Identity = 244/254 (96.06%), Postives = 251/254 (98.82%), Query Frame = 0


Query: 2   AATSGAVLNGLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKGG 61
           AATSGA+LNGLGSPFLHGGSRTQTLLAGARGGVNVV SRKLVIVAAAQPKKSWIPAVKGG
Sbjct: 5   AATSGALLNGLGSPFLHGGSRTQTLLAGARGGVNVVSSRKLVIVAAAQPKKSWIPAVKGG 64

Query: 62  GNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSG 121
           GN +DPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIF+GQAWSG
Sbjct: 65  GNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAWSG 124

Query: 122 IPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAEN 181
           IPWFEAGADP AIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAEN
Sbjct: 125 IPWFEAGADPSAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAEN 184

Query: 182 FANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFYF 241
           FANATGEQGYPGGKFFDPLGFAGT+KDGVYIPDT+KLERLKLAEIKHARIAMLAMLIFYF
Sbjct: 185 FANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYF 244

Query: 242 EAGQGKTPLGALGV 256
           EAGQGKTPLGALG+
Sbjct: 245 EAGQGKTPLGALGL 258

[Close]

BLAST of CmoCh15G006090 vs. NCBI nr
Match: XP_022939277.1 (chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 526.2 bits (1354), Expect = 1.6e-145
Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 0


Query: 1   MAATSGAVLNGLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKG 60
           MAATSGAVLNGLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKG
Sbjct: 1   MAATSGAVLNGLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKG 60

Query: 61  GGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS 120
           GGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS
Sbjct: 61  GGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS 120

Query: 121 GIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 180
           GIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE
Sbjct: 121 GIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 180

Query: 181 NFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFY 240
           NFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFY
Sbjct: 181 NFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFY 240

Query: 241 FEAGQGKTPLGALGV 256
           FEAGQGKTPLGALGV
Sbjct: 241 FEAGQGKTPLGALGV 255

[Close]

BLAST of CmoCh15G006090 vs. NCBI nr
Match: XP_023550942.1 (chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 523.9 bits (1348), Expect = 8.0e-145
Identity = 253/255 (99.22%), Postives = 255/255 (100.00%), Query Frame = 0


Query: 1   MAATSGAVLNGLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKG 60
           MAATSGAVLNGLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKG
Sbjct: 1   MAATSGAVLNGLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKG 60

Query: 61  GGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS 120
           GGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS
Sbjct: 61  GGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS 120

Query: 121 GIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 180
           GIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE
Sbjct: 121 GIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 180

Query: 181 NFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFY 240
           NFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDT+KLERLKLAEIKHAR+AMLAMLIFY
Sbjct: 181 NFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTEKLERLKLAEIKHARLAMLAMLIFY 240

Query: 241 FEAGQGKTPLGALGV 256
           FEAGQGKTPLGALGV
Sbjct: 241 FEAGQGKTPLGALGV 255

[Close]

BLAST of CmoCh15G006090 vs. NCBI nr
Match: KAG7016421.1 (Chlorophyll a-b binding protein CP24 10A, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 523.1 bits (1346), Expect = 1.4e-144
Identity = 254/255 (99.61%), Postives = 254/255 (99.61%), Query Frame = 0


Query: 1   MAATSGAVLNGLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKG 60
           MAATSGAVLNGLGSPFL GGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKG
Sbjct: 1   MAATSGAVLNGLGSPFLRGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKG 60

Query: 61  GGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS 120
           GGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS
Sbjct: 61  GGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS 120

Query: 121 GIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 180
           GIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE
Sbjct: 121 GIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 180

Query: 181 NFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFY 240
           NFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFY
Sbjct: 181 NFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFY 240

Query: 241 FEAGQGKTPLGALGV 256
           FEAGQGKTPLGALGV
Sbjct: 241 FEAGQGKTPLGALGV 255

[Close]

BLAST of CmoCh15G006090 vs. NCBI nr
Match: KAG6578893.1 (Chlorophyll a-b binding protein CP24 10A, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 521.9 bits (1343), Expect = 3.0e-144
Identity = 253/255 (99.22%), Postives = 254/255 (99.61%), Query Frame = 0


Query: 1   MAATSGAVLNGLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKG 60
           MAATSGAVLNGLGSPFL GGSRTQTLLAGARGGVNVVGSRKLVIVAA+QPKKSWIPAVKG
Sbjct: 1   MAATSGAVLNGLGSPFLRGGSRTQTLLAGARGGVNVVGSRKLVIVAASQPKKSWIPAVKG 60

Query: 61  GGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS 120
           GGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS
Sbjct: 61  GGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS 120

Query: 121 GIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 180
           GIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE
Sbjct: 121 GIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 180

Query: 181 NFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFY 240
           NFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFY
Sbjct: 181 NFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFY 240

Query: 241 FEAGQGKTPLGALGV 256
           FEAGQGKTPLGALGV
Sbjct: 241 FEAGQGKTPLGALGV 255

[Close]

BLAST of CmoCh15G006090 vs. NCBI nr
Match: XP_022993917.1 (chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 521.5 bits (1342), Expect = 4.0e-144
Identity = 253/255 (99.22%), Postives = 254/255 (99.61%), Query Frame = 0


Query: 1   MAATSGAVLNGLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKG 60
           MAATSGAVLNGLGSPFL GGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKG
Sbjct: 1   MAATSGAVLNGLGSPFLRGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKG 60

Query: 61  GGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS 120
           GGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS
Sbjct: 61  GGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS 120

Query: 121 GIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 180
           GIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE
Sbjct: 121 GIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 180

Query: 181 NFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFY 240
           NFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDT+KLERLKLAEIKHARIAMLAMLIFY
Sbjct: 181 NFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFY 240

Query: 241 FEAGQGKTPLGALGV 256
           FEAGQGKTPLGALGV
Sbjct: 241 FEAGQGKTPLGALGV 255

[Close]

BLAST of CmoCh15G006090 vs. TAIR 10
Match: AT1G15820.1 (light harvesting complex photosystem II subunit 6 )

HSP 1 Score: 434.1 bits (1115), Expect = 7.7e-122
Identity = 210/255 (82.35%), Postives = 227/255 (89.02%), Query Frame = 0


Query: 3   ATSGAVLNGLGSPFLHGGSRTQTLLAGARG-GVNVVGSRKLVI-VAAAQPKKSWIPAVKG 62
           A SGAVL+GLGS FL GG R  T LA   G G   VG + L++  AAAQPKKSWIPAVKG
Sbjct: 4   AVSGAVLSGLGSSFLTGGKRGATALASGVGTGAQRVGRKTLIVAAAAAQPKKSWIPAVKG 63

Query: 63  GGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS 122
           GGN +DPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV+GIFVGQAWS
Sbjct: 64  GGNFLDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWS 123

Query: 123 GIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAE 182
           G+ WFEAGA P AIAPFSFGSLLGTQLLLMGWVESKRWVDFFNP+SQSVEWATPWS+TAE
Sbjct: 124 GVAWFEAGAQPDAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWSKTAE 183

Query: 183 NFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFY 242
           NFAN TG+QGYPGG+FFDPLG AG  +DGVY PD +KLERLKLAEIKH+R+AM+AMLIFY
Sbjct: 184 NFANYTGDQGYPGGRFFDPLGLAGKNRDGVYEPDFEKLERLKLAEIKHSRLAMVAMLIFY 243

Query: 243 FEAGQGKTPLGALGV 256
           FEAGQGKTPLGALG+
Sbjct: 244 FEAGQGKTPLGALGL 258

[Close]

BLAST of CmoCh15G006090 vs. TAIR 10
Match: AT1G19150.1 (photosystem I light harvesting complex gene 6 )

HSP 1 Score: 137.1 bits (344), Expect = 2.0e-32
Identity = 78/180 (43.33%), Postives = 103/180 (57.22%), Query Frame = 0


Query: 67  PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFE 126
           PEWLDGSLPGDFGFDPLGLG DP  LKW+ +AELIH RWAM AV GI + +    + + E
Sbjct: 75  PEWLDGSLPGDFGFDPLGLGSDPDTLKWFAQAELIHSRWAMLAVTGIIIPECLERLGFIE 134

Query: 127 --AGADPGAIAPFSFG-SLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFA 186
             +  D G+   F+   +L   Q++LMGW E +RW D   P S  +E   P      +  
Sbjct: 135 NFSWYDAGSREYFADSTTLFVAQMVLMGWAEGRRWADLIKPGSVDIEPKYP------HKV 194

Query: 187 NATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFYFEA 244
           N   + GYPGG +FD + +     + V +        L+  EIK+ R+AMLA L F F+A
Sbjct: 195 NPKPDVGYPGGLWFDFMMWGRGSPEPVMV--------LRTKEIKNGRLAMLAFLGFCFQA 240

[Close]

BLAST of CmoCh15G006090 vs. TAIR 10
Match: AT1G45474.1 (photosystem I light harvesting complex gene 5 )

HSP 1 Score: 132.5 bits (332), Expect = 4.8e-31
Identity = 92/242 (38.02%), Postives = 124/242 (51.24%), Query Frame = 0


Query: 11  GLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKGGGNLVDPEWL 70
           G+   FLH      +++      V   G    +    A  + +W+P       L  P +L
Sbjct: 8   GITGGFLHHRRDASSVITRRISSVKAAGGG--INPTVAVERATWLP------GLNPPPYL 67

Query: 71  DGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ--AWSGI----PW 130
           DG+L GD+GFDPLGLG+DP  LKWY +AEL+H R+AM  V GI        +GI     W
Sbjct: 68  DGNLAGDYGFDPLGLGEDPESLKWYVQAELVHSRFAMLGVAGILFTDLLRTTGIRNLPVW 127

Query: 131 FEAGADPGAIAPFSFGS---LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAEN 190
           +EAGA       F F S   L+  Q LLMG+ E+KR++DF +P SQ+ E +  +   A  
Sbjct: 128 YEAGA-----VKFDFASTKTLIVVQFLLMGFAETKRYMDFVSPGSQAKEGSFFFGLEA-- 187

Query: 191 FANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFYF 244
            A    E GYPGG   +PLG A          D       KL EIK+ R+AM+AML F+ 
Sbjct: 188 -ALEGLEPGYPGGPLLNPLGLA---------KDVQNAHDWKLKEIKNGRLAMMAMLGFFV 224

[Close]

BLAST of CmoCh15G006090 vs. TAIR 10
Match: AT1G45474.2 (photosystem I light harvesting complex gene 5 )

HSP 1 Score: 132.5 bits (332), Expect = 4.8e-31
Identity = 92/242 (38.02%), Postives = 124/242 (51.24%), Query Frame = 0


Query: 11  GLGSPFLHGGSRTQTLLAGARGGVNVVGSRKLVIVAAAQPKKSWIPAVKGGGNLVDPEWL 70
           G+   FLH      +++      V   G    +    A  + +W+P       L  P +L
Sbjct: 8   GITGGFLHHRRDASSVITRRISSVKAAGGG--INPTVAVERATWLP------GLNPPPYL 67

Query: 71  DGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ--AWSGI----PW 130
           DG+L GD+GFDPLGLG+DP  LKWY +AEL+H R+AM  V GI        +GI     W
Sbjct: 68  DGNLAGDYGFDPLGLGEDPESLKWYVQAELVHSRFAMLGVAGILFTDLLRTTGIRNLPVW 127

Query: 131 FEAGADPGAIAPFSFGS---LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAEN 190
           +EAGA       F F S   L+  Q LLMG+ E+KR++DF +P SQ+ E +  +   A  
Sbjct: 128 YEAGA-----VKFDFASTKTLIVVQFLLMGFAETKRYMDFVSPGSQAKEGSFFFGLEA-- 187

Query: 191 FANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFYF 244
            A    E GYPGG   +PLG A          D       KL EIK+ R+AM+AML F+ 
Sbjct: 188 -ALEGLEPGYPGGPLLNPLGLA---------KDVQNAHDWKLKEIKNGRLAMMAMLGFFV 224

[Close]

BLAST of CmoCh15G006090 vs. TAIR 10
Match: AT3G61470.1 (photosystem I light harvesting complex gene 2 )

HSP 1 Score: 132.1 bits (331), Expect = 6.3e-31
Identity = 83/229 (36.24%), Postives = 113/229 (49.34%), Query Frame = 0


Query: 32  GGVNVVGSRKLVIVAAAQPKKS------------WIPAVKGGGNLVDPEWLDGSLPGDFG 91
           GG  +   +KL + A ++P  S            W P          PEWLDGSLPGDFG
Sbjct: 21  GGKKLRLKKKLTVPAVSRPDASVRAVAADPDRPIWFP------GSTPPEWLDGSLPGDFG 80

Query: 92  FDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGI------PWFEAGADPGA 151
           FDPLGL  DP  LKW  +AE++H RWAM    GIF+ +  + I       W+ AG     
Sbjct: 81  FDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGEQEYF 140

Query: 152 IAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPG 211
                  +L   +L+L+GW E +RW D   P S + +   P      N    T + GYPG
Sbjct: 141 T---DKTTLFVVELILIGWAEGRRWADIIKPGSVNTDPVFP-----NNKLTGT-DVGYPG 200

Query: 212 GKFFDPLGFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFYFE 243
           G +FDPLG+              KL+ L+  EIK+ R+AMLA++  +F+
Sbjct: 201 GLWFDPLGWGS--------GSPAKLKELRTKEIKNGRLAMLAVMGAWFQ 226

The following BLAST results are available for this feature:

BLAST of CmoCh15G006090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P27524	2.6e-122	82.56	Chlorophyll a-b binding protein CP24 10A, chloroplastic OS=Solanum lycopersicum ...	[more]
P36494	3.7e-121	81.08	Chlorophyll a-b binding protein CP24, chloroplastic OS=Spinacia oleracea OX=3562...	[more]
P27525	4.9e-121	82.49	Chlorophyll a-b binding protein CP24 10B, chloroplastic OS=Solanum lycopersicum ...	[more]
Q8LCQ4	2.8e-31	43.33	Photosystem I chlorophyll a/b-binding protein 6, chloroplastic OS=Arabidopsis th...	[more]
P13869	4.7e-31	36.18	Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida OX=4102 PE=2 S...	[more]

BLAST of CmoCh15G006090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FGC5	7.8e-146	100.00	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1JU87	1.9e-144	99.22	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1JEC2	5.2e-142	96.08	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]
D1MWY9	1.5e-141	96.08	Chlorophyll a-b binding protein, chloroplastic OS=Citrullus lanatus subsp. vulga...	[more]
A0A6J1EIR2	2.0e-141	96.06	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=...	[more]

BLAST of CmoCh15G006090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022939277.1	1.6e-145	100.00	chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Cucurbita moschata...	[more]
XP_023550942.1	8.0e-145	99.22	chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Cucurbita pepo sub...	[more]
KAG7016421.1	1.4e-144	99.61	Chlorophyll a-b binding protein CP24 10A, chloroplastic [Cucurbita argyrosperma ...	[more]
KAG6578893.1	3.0e-144	99.22	Chlorophyll a-b binding protein CP24 10A, chloroplastic, partial [Cucurbita argy...	[more]
XP_022993917.1	4.0e-144	99.22	chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Cucurbita maxima]	[more]

BLAST of CmoCh15G006090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15820.1	7.7e-122	82.35	light harvesting complex photosystem II subunit 6	[more]
AT1G19150.1	2.0e-32	43.33	photosystem I light harvesting complex gene 6	[more]
AT1G45474.1	4.8e-31	38.02	photosystem I light harvesting complex gene 5	[more]
AT1G45474.2	4.8e-31	38.02	photosystem I light harvesting complex gene 5	[more]
AT3G61470.1	6.3e-31	36.24	photosystem I light harvesting complex gene 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 67..243 e-value: 5.9E-48 score: 163.4
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 67..254 e-value: 3.1E-53 score: 182.5
IPR001344	Chlorophyll A-B binding protein, plant and chromista	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 2..255
None	No IPR available	PANTHER	PTHR21649:SF107	CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC	coord: 2..255
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 59..254

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh15G006090.1	CmoCh15G006090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009768	photosynthesis, light harvesting in photosystem I
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0009765	photosynthesis, light harvesting
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016020	membrane
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0046872	metal ion binding