CmoCh15G004970 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh15G004970
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr15: 2270889 .. 2272897 (-)
RNA-Seq ExpressionCmoCh15G004970
SyntenyCmoCh15G004970
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGGGATGAAAATGAGACTGTTTTGGAAGGAAGAAATGGTTGTTTTATCCGCCGCTTCAACAAGAAAATGACTGGAAGCAGCCGTCCTTGTAGCTGATCGCACTTTTTTGCTTTTCAGATTCAAAGAAAATGTCAGAGAACCCAAAAGTTATTGGGATGAAAGAGGATGGATCCCCTAAATTCCCCTTCACTTGGTTCTCTTTTCTTCCCAAGTTCGACCTCCGATTGCCGCTTCCGATCAACGGCGGCAAGAAACCGCCGGCTACGGTGATGGATGAACGTCCGAAGGACGACGACGGTGCTCAGAAGCCGGAGTTTGTGAGGTTTCCTAAAGCAAACTTGGCCGTTCCTTCGGTGGAGGTTGAAGCCGATGTCTCCGGCAAGACTTCCAATCCGGCGGTCATCTGGCAGGTTTGTCTTCTCTTTCGTTTTTATGGAAACTGGATGAAATTGAAGTTGCTGCTGGGATATTGCACTCTTAGTGTTTGTGGATTTGACTGAATTGGGAGTAATTGTTGAGTGTTGAAGCATCTCATTAATGGTGATTTGGAGGGTGGTTGGAGAACGTTTGATTTTTCTTGTTCTTTGTTTTGCCTTTTCTGTGCTTATGGTTTCAGCTTACCTTGGATTCCCCTTCTTAACCCACTATTGATTAGTTTAGAGCTTTAGATGATAGCTAATTGGTCTGTTTGGTGGCTAATCGATGGATAGTTCTCCATTATCTTTGGGAACGTGCAAGGATTTCTCTCATGTACTAATGCAAATAGAGAACTAAACCTCATCAGTCATTGGGGATATATATAGAAATCTTCTGGATACCATTTAGGTATAAAGAATTTCCTATTTTCAACGGGGATAGATAGAACAGAAAGGAATCTGGATATGTAAATGCCTCTTGGTAAATTGTTTTTCCCCCCTATTTTATCTGCATTTTAGCAACATGACTAGCTGCTATAATAATTGAGAACTCGAAAGCCAGTGTTTGAAAATGGTCGAATCTAGGGGAGCAAAGAGATAGAAGGAATTGAGAAGAAGGCTTAAACACAAAGGGAGGGGTGAGCAAGCCTGATTTATAGGGAGGGATGAGCAAGCCTGCAACCATTTGTATCTATGTGCTATTAATTTCACTTTATATTCCTATGTTATATTTTGAACGAGGGGGTTGAAAAGTCCAAATAGATCTAGAGATAAGGTAGTATGGAAGAGGACTGGGGCCACTATGGATTGTTCAACTAGTAGAGAGTTCATTATCGTCTCGTCGGCATCTTACTTTAATATTTGATTCTCGGTTGAATTACAAGTTTAGTCTTCAAGCTTTGAAGTTTATCTAATGAGTCCATTTACTTTAATAAGCCTTTAAATTTTCAATTTTATATCTTATATGTGGTTGAACTTTTAAAATGTCTAGTATGTTTCTCAACAAGTCTTTGATGCGTTAAAAAATTTATACATAAATTCATTTTTATGTCTAATAGGACTCTAATCTTTTAATTTTGTGTCTAATATGCTCGTGAGTTTTTTTAAATGTTGAATAGAGGAAGGATTACTAGACACAAAATCGAGATTTCAGAGACTTATTGGACATAAGCGAAAAGTTTAAAGACATACTAGATACCTTTTAAAGTTAAGTTCTATTGGACACAAAATTGAAAGTTCAAAAGCTTATATACACCAAATAGAACGAAAGTTTAGAGTTTGAACTTACAATTGAATCTTTAATTCATTGACTTGTTTTTATTCTCCTGCCCTGGCTAATATTTTCATTTACTTGTTTGGAATTTGAGCTTTCATGACTCCTTTTTTATAACATGATCATTTATTTGCGTTAGGTATATGCCCTGGGAGGGCATCTAATTTTGGGTTTTTGTAACATGATCATTTATTTGCTTTAGGTATATGCCCTGGGAGGGTTTCTAATTTTGAGTTGGGCATGGGCAAGATGGAAGGAGAGAAGGCCTAAAAGACGTTCAGATGATGACGATGAGAACGAGGATTCCAGGGATACCTAG

mRNA sequence

TTGGGATGAAAATGAGACTGTTTTGGAAGGAAGAAATGGTTGTTTTATCCGCCGCTTCAACAAGAAAATGACTGGAAGCAGCCGTCCTTGTAGCTGATCGCACTTTTTTGCTTTTCAGATTCAAAGAAAATGTCAGAGAACCCAAAAGTTATTGGGATGAAAGAGGATGGATCCCCTAAATTCCCCTTCACTTGGTTCTCTTTTCTTCCCAAGTTCGACCTCCGATTGCCGCTTCCGATCAACGGCGGCAAGAAACCGCCGGCTACGGTGATGGATGAACGTCCGAAGGACGACGACGGTGCTCAGAAGCCGGAGTTTGTGAGGTTTCCTAAAGCAAACTTGGCCGTTCCTTCGGTGGAGGTTGAAGCCGATGTCTCCGGCAAGACTTCCAATCCGGCGGTCATCTGGCAGGTATATGCCCTGGGAGGGTTTCTAATTTTGAGTTGGGCATGGGCAAGATGGAAGGAGAGAAGGCCTAAAAGACGTTCAGATGATGACGATGAGAACGAGGATTCCAGGGATACCTAG

Coding sequence (CDS)

ATGTCAGAGAACCCAAAAGTTATTGGGATGAAAGAGGATGGATCCCCTAAATTCCCCTTCACTTGGTTCTCTTTTCTTCCCAAGTTCGACCTCCGATTGCCGCTTCCGATCAACGGCGGCAAGAAACCGCCGGCTACGGTGATGGATGAACGTCCGAAGGACGACGACGGTGCTCAGAAGCCGGAGTTTGTGAGGTTTCCTAAAGCAAACTTGGCCGTTCCTTCGGTGGAGGTTGAAGCCGATGTCTCCGGCAAGACTTCCAATCCGGCGGTCATCTGGCAGGTATATGCCCTGGGAGGGTTTCTAATTTTGAGTTGGGCATGGGCAAGATGGAAGGAGAGAAGGCCTAAAAGACGTTCAGATGATGACGATGAGAACGAGGATTCCAGGGATACCTAG

Protein sequence

MSENPKVIGMKEDGSPKFPFTWFSFLPKFDLRLPLPINGGKKPPATVMDERPKDDDGAQKPEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALGGFLILSWAWARWKERRPKRRSDDDDENEDSRDT
Homology
[Close]
BLAST of CmoCh15G004970 vs. ExPASy TrEMBL
Match: A0A6J1FFF8 (uncharacterized protein LOC111444995 OS=Cucurbita moschata OX=3662 GN=LOC111444995 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 7.3e-71
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 1   MSENPKVIGMKEDGSPKFPFTWFSFLPKFDLRLPLPINGGKKPPATVMDERPKDDDGAQK 60
           MSENPKVIGMKEDGSPKFPFTWFSFLPKFDLRLPLPINGGKKPPATVMDERPKDDDGAQK
Sbjct: 1   MSENPKVIGMKEDGSPKFPFTWFSFLPKFDLRLPLPINGGKKPPATVMDERPKDDDGAQK 60

Query: 61  PEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALGGFLILSWAWARWKERRPKRRS 120
           PEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALGGFLILSWAWARWKERRPKRRS
Sbjct: 61  PEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALGGFLILSWAWARWKERRPKRRS 120

Query: 121 DDDDENEDSRDT 133
           DDDDENEDSRDT
Sbjct: 121 DDDDENEDSRDT 132

[Close]
BLAST of CmoCh15G004970 vs. ExPASy TrEMBL
Match: A0A6J1JVP7 (uncharacterized protein LOC111489298 OS=Cucurbita maxima OX=3661 GN=LOC111489298 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.4e-66
Identity = 125/132 (94.70%), Postives = 129/132 (97.73%), Query Frame = 0 

Query: 1   MSENPKVIGMKEDGSPKFPFTWFSFLPKFDLRLPLPINGGKKPPATVMDERPKDDDGAQK 60
           MSE+PKVIG+KE+ SPKFPFTWFSFLPKFDLRLPLPINGGKKPPATVMDE PKDD+ AQK
Sbjct: 1   MSESPKVIGIKEEESPKFPFTWFSFLPKFDLRLPLPINGGKKPPATVMDEGPKDDEDAQK 60

Query: 61  PEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALGGFLILSWAWARWKERRPKRRS 120
           PEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALGGFLILSWAWARWKERRPKRRS
Sbjct: 61  PEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALGGFLILSWAWARWKERRPKRRS 120

Query: 121 DDDDENEDSRDT 133
           DDDDENEDSRDT
Sbjct: 121 DDDDENEDSRDT 132

[Close]
BLAST of CmoCh15G004970 vs. ExPASy TrEMBL
Match: A0A0A0LSR5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G386090 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 7.5e-52
Identity = 101/133 (75.94%), Postives = 113/133 (84.96%), Query Frame = 0 

Query: 1   MSENPKVIGMKED-GSPKFPFTWFSFLPKFDLRLPLPINGGKKPPATVMDERPKDDDGAQ 60
           M +NPK + +KED  +PK PF WFSFLPKFD RLP P+NGGKKPP  V+DE  K D+ AQ
Sbjct: 1   MEDNPKFVAVKEDENNPKSPFPWFSFLPKFDFRLPFPVNGGKKPPPVVVDESRKADNDAQ 60

Query: 61  KPEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALGGFLILSWAWARWKERRPKRR 120
           KPEFVRFPKA L V SVE EADVSGKTSNPAV+WQVYALGGFLILSWAWARWKERRP+RR
Sbjct: 61  KPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALGGFLILSWAWARWKERRPQRR 120

Query: 121 SDDDDENEDSRDT 133
           S+DDDE+EDS D+
Sbjct: 121 SNDDDEDEDSSDS 133

[Close]
BLAST of CmoCh15G004970 vs. ExPASy TrEMBL
Match: A0A5D3CKR2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold304G00550 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 9.2e-50
Identity = 101/133 (75.94%), Postives = 111/133 (83.46%), Query Frame = 0 

Query: 1   MSENPKVIGMKED-GSPKFPFTWFSFLPKFDLRLPLPINGGKKPPATVMDERPKDDDGAQ 60
           M +NPK + MKED  +PK PF WFSFLPKFD RLP P+NGGKK P  V+DE  K D+ AQ
Sbjct: 1   MEDNPKFVAMKEDENNPKSPFPWFSFLPKFDFRLPFPVNGGKKLPPVVVDETRKADNDAQ 60

Query: 61  KPEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALGGFLILSWAWARWKERRPKRR 120
           KPEFVRFPKA L V SVE EADVSGKTSNPAV+WQVYALGGFLILSWAWARWKERRP+RR
Sbjct: 61  KPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALGGFLILSWAWARWKERRPQRR 120

Query: 121 SDDDDENEDSRDT 133
           S+DDDE +DS DT
Sbjct: 121 SNDDDE-DDSSDT 132

[Close]
BLAST of CmoCh15G004970 vs. ExPASy TrEMBL
Match: A0A1S3C3J3 (uncharacterized protein LOC103496485 OS=Cucumis melo OX=3656 GN=LOC103496485 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 9.2e-50
Identity = 101/133 (75.94%), Postives = 111/133 (83.46%), Query Frame = 0 

Query: 1   MSENPKVIGMKED-GSPKFPFTWFSFLPKFDLRLPLPINGGKKPPATVMDERPKDDDGAQ 60
           M +NPK + MKED  +PK PF WFSFLPKFD RLP P+NGGKK P  V+DE  K D+ AQ
Sbjct: 1   MEDNPKFVAMKEDENNPKSPFPWFSFLPKFDFRLPFPVNGGKKLPPVVVDETRKADNDAQ 60

Query: 61  KPEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALGGFLILSWAWARWKERRPKRR 120
           KPEFVRFPKA L V SVE EADVSGKTSNPAV+WQVYALGGFLILSWAWARWKERRP+RR
Sbjct: 61  KPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALGGFLILSWAWARWKERRPQRR 120

Query: 121 SDDDDENEDSRDT 133
           S+DDDE +DS DT
Sbjct: 121 SNDDDE-DDSSDT 132

[Close]
BLAST of CmoCh15G004970 vs. NCBI nr
Match: XP_022938932.1 (uncharacterized protein LOC111444995 [Cucurbita moschata])

HSP 1 Score: 276.2 bits (705), Expect = 1.5e-70
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 1   MSENPKVIGMKEDGSPKFPFTWFSFLPKFDLRLPLPINGGKKPPATVMDERPKDDDGAQK 60
           MSENPKVIGMKEDGSPKFPFTWFSFLPKFDLRLPLPINGGKKPPATVMDERPKDDDGAQK
Sbjct: 1   MSENPKVIGMKEDGSPKFPFTWFSFLPKFDLRLPLPINGGKKPPATVMDERPKDDDGAQK 60

Query: 61  PEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALGGFLILSWAWARWKERRPKRRS 120
           PEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALGGFLILSWAWARWKERRPKRRS
Sbjct: 61  PEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALGGFLILSWAWARWKERRPKRRS 120

Query: 121 DDDDENEDSRDT 133
           DDDDENEDSRDT
Sbjct: 121 DDDDENEDSRDT 132

[Close]
BLAST of CmoCh15G004970 vs. NCBI nr
Match: KAG6578783.1 (hypothetical protein SDJN03_23231, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016314.1 hypothetical protein SDJN02_21421 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 273.1 bits (697), Expect = 1.3e-69
Identity = 131/132 (99.24%), Postives = 131/132 (99.24%), Query Frame = 0 

Query: 1   MSENPKVIGMKEDGSPKFPFTWFSFLPKFDLRLPLPINGGKKPPATVMDERPKDDDGAQK 60
           MSENPKVIGMKED SPKFPFTWFSFLPKFDLRLPLPINGGKKPPATVMDERPKDDDGAQK
Sbjct: 1   MSENPKVIGMKEDESPKFPFTWFSFLPKFDLRLPLPINGGKKPPATVMDERPKDDDGAQK 60

Query: 61  PEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALGGFLILSWAWARWKERRPKRRS 120
           PEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALGGFLILSWAWARWKERRPKRRS
Sbjct: 61  PEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALGGFLILSWAWARWKERRPKRRS 120

Query: 121 DDDDENEDSRDT 133
           DDDDENEDSRDT
Sbjct: 121 DDDDENEDSRDT 132

[Close]
BLAST of CmoCh15G004970 vs. NCBI nr
Match: XP_023550789.1 (uncharacterized protein LOC111808822 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 265.4 bits (677), Expect = 2.6e-67
Identity = 128/132 (96.97%), Postives = 128/132 (96.97%), Query Frame = 0 

Query: 1   MSENPKVIGMKEDGSPKFPFTWFSFLPKFDLRLPLPINGGKKPPATVMDERPKDDDGAQK 60
           MSE PKVIGMKED SPKFPFTWFSFLPKFDLRLPLPINGGKKPPATVMDE PKDDD AQK
Sbjct: 42  MSETPKVIGMKEDESPKFPFTWFSFLPKFDLRLPLPINGGKKPPATVMDEGPKDDDDAQK 101

Query: 61  PEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALGGFLILSWAWARWKERRPKRRS 120
           PEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALGGFLILSWAWARWKERRPKRRS
Sbjct: 102 PEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALGGFLILSWAWARWKERRPKRRS 161

Query: 121 DDDDENEDSRDT 133
           DDDDENEDSRDT
Sbjct: 162 DDDDENEDSRDT 173

[Close]
BLAST of CmoCh15G004970 vs. NCBI nr
Match: XP_023550786.1 (uncharacterized protein LOC111808822 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 265.4 bits (677), Expect = 2.6e-67
Identity = 128/132 (96.97%), Postives = 128/132 (96.97%), Query Frame = 0 

Query: 1   MSENPKVIGMKEDGSPKFPFTWFSFLPKFDLRLPLPINGGKKPPATVMDERPKDDDGAQK 60
           MSE PKVIGMKED SPKFPFTWFSFLPKFDLRLPLPINGGKKPPATVMDE PKDDD AQK
Sbjct: 74  MSETPKVIGMKEDESPKFPFTWFSFLPKFDLRLPLPINGGKKPPATVMDEGPKDDDDAQK 133

Query: 61  PEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALGGFLILSWAWARWKERRPKRRS 120
           PEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALGGFLILSWAWARWKERRPKRRS
Sbjct: 134 PEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALGGFLILSWAWARWKERRPKRRS 193

Query: 121 DDDDENEDSRDT 133
           DDDDENEDSRDT
Sbjct: 194 DDDDENEDSRDT 205

[Close]
BLAST of CmoCh15G004970 vs. NCBI nr
Match: XP_022993210.1 (uncharacterized protein LOC111489298 [Cucurbita maxima] >XP_022993211.1 uncharacterized protein LOC111489298 [Cucurbita maxima])

HSP 1 Score: 261.2 bits (666), Expect = 5.0e-66
Identity = 125/132 (94.70%), Postives = 129/132 (97.73%), Query Frame = 0 

Query: 1   MSENPKVIGMKEDGSPKFPFTWFSFLPKFDLRLPLPINGGKKPPATVMDERPKDDDGAQK 60
           MSE+PKVIG+KE+ SPKFPFTWFSFLPKFDLRLPLPINGGKKPPATVMDE PKDD+ AQK
Sbjct: 1   MSESPKVIGIKEEESPKFPFTWFSFLPKFDLRLPLPINGGKKPPATVMDEGPKDDEDAQK 60

Query: 61  PEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALGGFLILSWAWARWKERRPKRRS 120
           PEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALGGFLILSWAWARWKERRPKRRS
Sbjct: 61  PEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALGGFLILSWAWARWKERRPKRRS 120

Query: 121 DDDDENEDSRDT 133
           DDDDENEDSRDT
Sbjct: 121 DDDDENEDSRDT 132

[Close]
BLAST of CmoCh15G004970 vs. TAIR 10
Match: AT3G52230.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast outer membrane, chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; Has 29 Blast hits to 29 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 73.6 bits (179), Expect = 1.4e-13
Identity = 45/102 (44.12%), Postives = 59/102 (57.84%), Query Frame = 0 

Query: 41  KKPPATVMDERPKDDDGAQKP-----EFVRFP-KANLAVPSVEVEAD-VSGKTSNPAVIW 100
           K PPAT+    PK   G ++P     E V FP     +   ++ EA+  SG+TSN  ++W
Sbjct: 36  KPPPATIDANAPK-PTGEKEPLKSTYETVTFPYNPPKSAEPIKFEAEPSSGRTSNSVILW 95

Query: 101 QVYALGGFLILSWAWARWKERR----PKRRSDDDDENEDSRD 132
           QVYALGGFL+L WAWARW ER      K  + DDD+ +D  D
Sbjct: 96  QVYALGGFLVLKWAWARWNERNERSDKKEATGDDDQKDDDED 136

The following BLAST results are available for this feature:
BLAST of CmoCh15G004970 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh15G004970 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FFF87.3e-71100.00uncharacterized protein LOC111444995 OS=Cucurbita moschata OX=3662 GN=LOC1114449... [more]
A0A6J1JVP72.4e-6694.70uncharacterized protein LOC111489298 OS=Cucurbita maxima OX=3661 GN=LOC111489298... [more]
A0A0A0LSR57.5e-5275.94Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G386090 PE=4 SV=1[more]
A0A5D3CKR29.2e-5075.94Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3C3J39.2e-5075.94uncharacterized protein LOC103496485 OS=Cucumis melo OX=3656 GN=LOC103496485 PE=... [more]
BLAST of CmoCh15G004970 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022938932.11.5e-70100.00uncharacterized protein LOC111444995 [Cucurbita moschata][more]
KAG6578783.11.3e-6999.24hypothetical protein SDJN03_23231, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023550789.12.6e-6796.97uncharacterized protein LOC111808822 isoform X3 [Cucurbita pepo subsp. pepo][more]
XP_023550786.12.6e-6796.97uncharacterized protein LOC111808822 isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_022993210.15.0e-6694.70uncharacterized protein LOC111489298 [Cucurbita maxima] >XP_022993211.1 uncharac... [more]
BLAST of CmoCh15G004970 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G52230.11.4e-1344.12unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 46..60
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..60
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 113..132
NoneNo IPR availablePANTHERPTHR36374OS01G0969000 PROTEINcoord: 2..130
NoneNo IPR availablePANTHERPTHR36374:SF1OS01G0969000 PROTEINcoord: 2..130

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh15G004970.1CmoCh15G004970.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0009507 chloroplast
cellular_component GO:0016021 integral component of membrane