CmoCh15G004290 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GGTGAGGGGCCGACGTAAGAAACGTGGCTGAGCGAAGGCGCGAACACAGCGGATAGGCAATCCAAGAACAGAACCAGAAGATAAGTTCATCTCACATTAACGAAGCACACGCTTCAGAAGCAAAGGATCTTCAATGGCGTCTCTGCATTGCTTACCCCCTGTCCAGAAGTCTCTCTTCATCAATTCTCTTTCTCAGGTTCACATTTCCTTCAAAATCAATCCAATTTTGGCTTCTGTTTTCTTCCTGTCATTCGTTCTGATTAACGATCAATTATCTTTTTTCGCTCGCAGAAACTCCATGGAAGATCTGTTTGCTGCAGAGCGGGGATTTCATTTCTTGTAAGGGCTGAGCGAGCACGCGGATCTTCAGTTAATGGCCATGCGTGCAGTTCCGAAGGTCAGTTTACCAAATTGAGATGGAAAATCAGGTTTCATATGAATTTGAGTACTGATTATACTGGAATTTAG GGTGAGGGGCCGACGTAAGAAACGTGGCTGAGCGAAGGCGCGAACACAGCGGATAGGCAATCCAAGAACAGAACCAGAAGATAAGTTCATCTCACATTAACGAAGCACACGCTTCAGAAGCAAAGGATCTTCAATGGCGTCTCTGCATTGCTTACCCCCTGTCCAGAAGTCTCTCTTCATCAATTCTCTTTCTCAGAAACTCCATGGAAGATCTGTTTGCTGCAGAGCGGGGATTTCATTTCTTGTAAGGGCTGAGCGAGCACGCGGATCTTCAGTTAATGGCCATGCGTGCAGTTCCGAAGGTCAGTTTACCAAATTGAGATGGAAAATCAGGTTTCATATGAATTTGAGTACTGATTATACTGGAATTTAG ATGGCGTCTCTGCATTGCTTACCCCCTGTCCAGAAGTCTCTCTTCATCAATTCTCTTTCTCAGAAACTCCATGGAAGATCTGTTTGCTGCAGAGCGGGGATTTCATTTCTTGTAAGGGCTGAGCGAGCACGCGGATCTTCAGTTAATGGCCATGCGTGCAGTTCCGAAGGTCAGTTTACCAAATTGAGATGGAAAATCAGGTTTCATATGAATTTGAGTACTGATTATACTGGAATTTAG MASLHCLPPVQKSLFINSLSQKLHGRSVCCRAGISFLVRAERARGSSVNGHACSSEGQFTKLRWKIRFHMNLSTDYTGI Homology
BLAST of CmoCh15G004290 vs. ExPASy TrEMBL
Match: A0A6J1FHM7 (psbP-like protein 1, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445433 PE=4 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 4.9e-30 Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0
BLAST of CmoCh15G004290 vs. ExPASy TrEMBL
Match: A0A6J1JVV0 (psbP-like protein 1, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489333 PE=4 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 9.2e-29 Identity = 65/67 (97.01%), Postives = 65/67 (97.01%), Query Frame = 0
BLAST of CmoCh15G004290 vs. ExPASy TrEMBL
Match: A0A6J1FN44 (psbP-like protein 1, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111445433 PE=4 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 7.5e-23 Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0
BLAST of CmoCh15G004290 vs. ExPASy TrEMBL
Match: A0A6J1JSB4 (psbP-like protein 1, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111489333 PE=4 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 2.9e-22 Identity = 55/56 (98.21%), Postives = 55/56 (98.21%), Query Frame = 0
BLAST of CmoCh15G004290 vs. ExPASy TrEMBL
Match: A0A6J1BYZ6 (psbP-like protein 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111006749 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 5.2e-16 Identity = 44/56 (78.57%), Postives = 48/56 (85.71%), Query Frame = 0
BLAST of CmoCh15G004290 vs. NCBI nr
Match: XP_022939579.1 (psbP-like protein 1, chloroplastic isoform X1 [Cucurbita moschata]) HSP 1 Score: 139.8 bits (351), Expect = 1.0e-29 Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0
BLAST of CmoCh15G004290 vs. NCBI nr
Match: KAG6578724.1 (hypothetical protein SDJN03_23172, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 139.8 bits (351), Expect = 1.0e-29 Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0
BLAST of CmoCh15G004290 vs. NCBI nr
Match: XP_023551141.1 (psbP-like protein 1, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 137.9 bits (346), Expect = 3.8e-29 Identity = 66/67 (98.51%), Postives = 66/67 (98.51%), Query Frame = 0
BLAST of CmoCh15G004290 vs. NCBI nr
Match: XP_022993266.1 (psbP-like protein 1, chloroplastic isoform X1 [Cucurbita maxima]) HSP 1 Score: 135.6 bits (340), Expect = 1.9e-28 Identity = 65/67 (97.01%), Postives = 65/67 (97.01%), Query Frame = 0
BLAST of CmoCh15G004290 vs. NCBI nr
Match: KAG7016254.1 (PsbP-like protein 1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 115.9 bits (289), Expect = 1.6e-22 Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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