CmoCh15G004280 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh15G004280
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	psbP-like protein 1, chloroplastic
Location	Cmo_Chr15: 1940215 .. 1942443 (-)
RNA-Seq Expression	CmoCh15G004280
Synteny	CmoCh15G004280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGCTTGACATTCAGTGATTGTGTTATGAATCGAGATGATTTGGCGCAAGTAAATTGAGAGATTCGAAGGATTTACCGTGTACCGTTTCTTCAAACTCAAAAAGCATTTTCTGGCTTGTGTTTCCCGTGGATGATCTCACTTCATTCTTATCAGCTTTAGAAACAAATAATTTCATTATTCAATAGTTGCTCTGTTTTCTTGGCAGATAGACTTGGGAGACGCCAGCTGCTAGCCGGCAGTGCGTTTATTACTTGGATTTATCTTGCAGACATGAATTCCATGTCATGTAAGACTTATTTCTCCTCTTAGTTACTCATATCTTACGTTTCTCTTACATTTTGGTTGCTTCTATTGAAGAAGTTCAATTCTAAAATTAGTGCCTCAAGCGTACACTGTATTTCTTTCTTCCAAAATGGAGGATGATGATATCCTAAGGGTACCCGCTTGATATTGCTCAGTTGCTGCAGAAACAAAGAAAGGGTTCTTATCAGTTTCAGACAAGAAAGACGGCTACTCATTCGTCTACCCATTTGGGTGGCAGGTACTTTTGCACACACAATACACTTTAAATTTAACTACTTAGCACAAGAAGCACGTTTTAAAGCATTTTATTCACTCGAGTGAGCAGGAAGTAGTCATTGATGGTCAAGATAAGGTATTCAAAGATGTAATTGAACCATTAGAAAATGTCAGTGTCAATATGATTCCAACCAGCAAAGAAGATATTCGAGATTTTGGGTCCCCTCAACAGGTTAGCAATAAACTGTTCGAATAATGCATTAAGTTGGGAATTTTATCTTTAGGTAACTTCATTGTTTCATGATTCAGATTGCTGAAACTTTGATAAAGAAGGTTCTAGCTCCTTCTAATCAAAGAACAAAGTTAATCGAAGCATCAGAGGTTTGAATATCTATACTCTTGACTAAGATTTTATCATATTAGTTGCTGTCGAGTGAAATAAATAGTAGCTGTAAACTAACTTACCCGTTGGATCTGATCCACAAGCATCACTCACTCTACACAGAAGGTTCTTCGGTAAGTAAATCAATCATATAAAATGGAAATACACCCAAAAGTGCGACCAATTCATTTGTTCAATCTGTGATGTGAAGTCCATTGGCTCATCCCTTTAATCCAAGCTCATGGCTACAAATATTGACGATAGAACCCGTTCCAATGAGGTCGCTTGTCACTTCTTCTTGGCCATCTTCTCTTCACTTTGCTGTAGGATATATGCTCCAAATTTCATTTTGGCACAGTTGCTTCACATCAAGATAGCTCTCCTTGTGAAGTCTGGCCTTATAGAAAAAGAAATAGCAACCAATAAGCTACTTATACCTTGTTTTAATTAACGTTCAAAAGTTTGTCCATTCGAGAAAGTGTCCTAAGTTGTTCTAGTTTATGGGTTTGTGACGTCTCATATGACTTTTGATTCCCCTACAAGCTTTTGAAGGAGTTCATATTTGTTCGACTTGTCAAGTTTATATGACTATTGCTCTACAATTTTTCTAGCTTTACATGTTACCCTCCACAAAAAAAAAAAAAAGGTACATTTTCACCCCCTCTGTTATGTGTTGATGATGAATGGTGCAGCATGACATTGATGGGAAAGCGTACTACACATTTGAGTTTGTAGCTCAAGCTCCAAACTACACTCGCCATGCTCTCAGCACAATTGTTGTTGCCAACGGTATGAAACTTCGCTAGTCATATACTCTTGAACGAGAACATCTTTCTTGAAGTTTTTCTTGTTCATTCTATCCCCAGCAAATTATATATAGAAGAGCTTTATTTTTCATATAGAAGAGCTTTATTTTTCATCTTATTCAACAGTCGAACCATAACTAGATGATAATTTTGAACGATAGAAAGTAACTTCATTTTTAAAATCAACTTAGATTCCTAACAAAGCTCTTTTTTATCCTTTCAATGGCGCAGGGAAATTCTACACTTTGACAACCGGAGCAAATGAGAGGAGGTGGGAGAAAATGAAAGATAAATTGCGCACGGTCGTCGATTCCTTCACAATTTCAAAAGTTTGACGGGGCACCCATGTGAACACGTTTATCATTAATTTAGATTCTCTCAGGTTGTTTACAGCTTAAACTTCTGTAACTTACCCCCCTTTTGTTCATTAATTAAATTCATCAACATTCGAGCTTAGAGGAATTACAACACCTAGTACCGACAGTTTTACTTAAATTCCTGACAAATTTTGTGAAGGGG

mRNA sequence

ATGTGCTTGACATTCAGTGATTGTGTTATGAATCGAGATGATTTGGCGCAAAAACAAATAATTTCATTATTCAATAGTTGCTCTGTTTTCTTGGCAGATAGACTTGGGAGACGCCAGCTGCTAGCCGGCAGTGCGTTTATTACTTGGATTTATCTTGCAGACATGAATTCCATGTCATTTGCTGCAGAAACAAAGAAAGGGTTCTTATCAGTTTCAGACAAGAAAGACGGCTACTCATTCGTCTACCCATTTGGGTGGCAGCACAAGAAGCACGTTTTAAAGCATTTTATTCACTCGAGTGAGCAGGAAGTAGTCATTGATGGTCAAGATAAGGTATTCAAAGATGTAATTGAACCATTAGAAAATGTCAGTGTCAATATGATTCCAACCAGCAAAGAAGATATTCGAGATTTTGGGTCCCCTCAACAGATTGCTGAAACTTTGATAAAGAAGGTTCTAGCTCCTTCTAATCAAAGAACAAAGTTAATCGAAGCATCAGAGCATGACATTGATGGGAAAGCGTACTACACATTTGAGTTTGTAGCTCAAGCTCCAAACTACACTCGCCATGCTCTCAGCACAATTGTTGTTGCCAACGGGAAATTCTACACTTTGACAACCGGAGCAAATGAGAGGAGGTGGGAGAAAATGAAAGATAAATTGCGCACGGTCGTCGATTCCTTCACAATTTCAAAAGTTTGACGGGGCACCCATGTGAACACGTTTATCATTAATTTAGATTCTCTCAGGTTGTTTACAGCTTAAACTTCTGTAACTTACCCCCCTTTTGTTCATTAATTAAATTCATCAACATTCGAGCTTAGAGGAATTACAACACCTAGTACCGACAGTTTTACTTAAATTCCTGACAAATTTTGTGAAGGGG

Coding sequence (CDS)

ATGTGCTTGACATTCAGTGATTGTGTTATGAATCGAGATGATTTGGCGCAAAAACAAATAATTTCATTATTCAATAGTTGCTCTGTTTTCTTGGCAGATAGACTTGGGAGACGCCAGCTGCTAGCCGGCAGTGCGTTTATTACTTGGATTTATCTTGCAGACATGAATTCCATGTCATTTGCTGCAGAAACAAAGAAAGGGTTCTTATCAGTTTCAGACAAGAAAGACGGCTACTCATTCGTCTACCCATTTGGGTGGCAGCACAAGAAGCACGTTTTAAAGCATTTTATTCACTCGAGTGAGCAGGAAGTAGTCATTGATGGTCAAGATAAGGTATTCAAAGATGTAATTGAACCATTAGAAAATGTCAGTGTCAATATGATTCCAACCAGCAAAGAAGATATTCGAGATTTTGGGTCCCCTCAACAGATTGCTGAAACTTTGATAAAGAAGGTTCTAGCTCCTTCTAATCAAAGAACAAAGTTAATCGAAGCATCAGAGCATGACATTGATGGGAAAGCGTACTACACATTTGAGTTTGTAGCTCAAGCTCCAAACTACACTCGCCATGCTCTCAGCACAATTGTTGTTGCCAACGGGAAATTCTACACTTTGACAACCGGAGCAAATGAGAGGAGGTGGGAGAAAATGAAAGATAAATTGCGCACGGTCGTCGATTCCTTCACAATTTCAAAAGTTTGA

Protein sequence

MCLTFSDCVMNRDDLAQKQIISLFNSCSVFLADRLGRRQLLAGSAFITWIYLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQHKKHVLKHFIHSSEQEVVIDGQDKVFKDVIEPLENVSVNMIPTSKEDIRDFGSPQQIAETLIKKVLAPSNQRTKLIEASEHDIDGKAYYTFEFVAQAPNYTRHALSTIVVANGKFYTLTTGANERRWEKMKDKLRTVVDSFTISKV

Homology

[Close]

BLAST of CmoCh15G004280 vs. ExPASy Swiss-Prot
Match: P82538 (PsbP-like protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPL1 PE=1 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 4.0e-69
Identity = 132/207 (63.77%), Postives = 155/207 (74.88%), Query Frame = 0


Query: 25  NSCSVFLADRLGRRQLLAGSAFITWIYLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPF 84
           +S S  L D+  RR ++       WI L     +SFAAE+KKGFL+VSD KD Y+F+YPF
Sbjct: 38  SSSSSHLQDKCQRRLIVTFGVVAPWISLLSRAPLSFAAESKKGFLAVSDNKDAYAFLYPF 97

Query: 85  GWQHKKHVLKHFIHSSEQEVVIDGQDKVFKDVIEPLENVSVNMIPTSKEDIRDFGSPQQI 144
           GW               QEVVI+GQDKV+KDVIEPLE+VSVN++PTSK+ I++FG P+QI
Sbjct: 98  GW---------------QEVVIEGQDKVYKDVIEPLESVSVNLVPTSKQTIKEFGPPKQI 157

Query: 145 AETLIKKVLAPSNQRTKLIEASEHDIDGKAYYTFEFVAQAPNYTRHALSTIVVANGKFYT 204
           AETLIKKVLAP NQ+T LI+ASEHD+DGK YY FEF  QA NYTRHAL TI V NG FYT
Sbjct: 158 AETLIKKVLAPPNQKTTLIDASEHDVDGKTYYQFEFTVQARNYTRHALGTITVFNGNFYT 217

Query: 205 LTTGANERRWEKMKDKLRTVVDSFTIS 232
           LTTGANERRWEKMKD+L TVVDSF I+
Sbjct: 218 LTTGANERRWEKMKDRLHTVVDSFKIT 229

[Close]

BLAST of CmoCh15G004280 vs. ExPASy Swiss-Prot
Match: O80634 (Photosynthetic NDH subunit of lumenal location 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PNSL1 PE=1 SV=2)

HSP 1 Score: 122.1 bits (305), Expect = 8.4e-27
Identity = 69/197 (35.03%), Postives = 98/197 (49.75%), Query Frame = 0


Query: 37  RRQLLAGSAFITWIYLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQHKKHVLKHF 96
           RRQ L G    T +  +   ++  A E  K +    D++DGYS+ YP  W          
Sbjct: 59  RRQALVGVG--TLVATSIPATLLLAEEIPKSYSPFVDREDGYSYYYPSDW---------- 118

Query: 97  IHSSEQEVVIDGQDKVFKDVIEPLENVSVNMIPTSKEDIRDFGSPQQIAETLIKKVLAPS 156
                +E      D  FKD    L+NV V  IPT K DI + G  +++   L+K   A  
Sbjct: 119 -----REFDFRAHDSAFKDRYLQLQNVRVRFIPTEKNDIHEVGPMEEVVYDLVKHKFAAP 178

Query: 157 NQRTKLIEASEHDIDGKAYYTFEFVAQAPNYTRHALSTIVVANGKFYTLTTGANERRWEK 216
           NQ   + +  E   DGK YYTFE+  + P Y   + +T+ V N ++YTL  GANERRW K
Sbjct: 179 NQVATIYDMKERVEDGKNYYTFEYGLRTPIYATTSFATVAVGNNRYYTLIVGANERRWRK 238

Query: 217 MKDKLRTVVDSFTISKV 234
           +K +L+ V DS  I ++
Sbjct: 239 VKKQLQVVADSLKILQI 238

[Close]

BLAST of CmoCh15G004280 vs. ExPASy Swiss-Prot
Match: Q40407 (Oxygen-evolving enhancer protein 2, chloroplastic OS=Narcissus pseudonarcissus OX=39639 GN=PSBP PE=2 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 4.6e-09
Identity = 65/250 (26.00%), Postives = 104/250 (41.60%), Query Frame = 0


Query: 11  NRDDLAQKQIISLFN---SCS----VFLADRLGRRQLLAGSAFITWIYLADMNSMSFA-- 70
           NRD+  Q+    L +    C+      L+ RL    L+ G+A  + +  AD      A  
Sbjct: 28  NRDEQQQEHSARLQSPEADCATENDALLSRRLALTILIGGAALGSRVSAADAAYGESANV 87

Query: 71  ---AETKKGFLSVSDKKDGYSFVYPFGWQHKKHVLKHFIHSSEQEVVIDGQDKVFKDVIE 130
               +T   F +V+   DG+  + P  W   K            EV   GQ   ++D  +
Sbjct: 88  FGKPKTNTDFQTVTG--DGFKILIPSKWNPSK------------EVEFPGQVLRYEDNFD 147

Query: 131 PLENVSVNMIPTSKEDIRDFGSPQQ--------------IAETLIKKVLAPSNQRT-KLI 190
              NV V + PT K+ I+D+GSP+Q                +T+ +    P+  RT  ++
Sbjct: 148 TTSNVGVMVNPTDKKSIKDYGSPEQFLSQVDYLLGKQAYFGKTISEGGFEPNAVRTANIL 207

Query: 191 EASEHDIDGKAYYTFEFV---AQAPNYTRHALSTIVVANGKFYTLTTGANERRWEK-MKD 230
           E S   + GK YY+   +   A      +H L T  V++GK Y     A ++RW K  K 
Sbjct: 208 ETSTPVVGGKDYYSIHVLTRTADGDEGGKHLLITATVSDGKLYICKAQAGDKRWFKGAKK 263

[Close]

BLAST of CmoCh15G004280 vs. ExPASy Swiss-Prot
Match: O49080 (Oxygen-evolving enhancer protein 2, chloroplastic OS=Fritillaria agrestis OX=64177 GN=PSBP PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 8.7e-08
Identity = 50/189 (26.46%), Postives = 81/189 (42.86%), Query Frame = 0


Query: 62  AETKKGFLSVSDKKDGYSFVYPFGWQHKKHVLKHFIHSSEQEVVIDGQDKVFKDVIEPLE 121
           A+T   FL  +   DG++ + P  W   K            EV   GQ   ++D  +   
Sbjct: 90  AKTNTDFLPYTG--DGFNLLIPAKWNPSK------------EVEFPGQVLRYEDNFDVTS 149

Query: 122 NVSVNMIPTSKEDIRDFGSPQQIAET----LIKKVLA----------PSNQRT-KLIEAS 181
           NVSV + PTSK+ I D+G+P++   T    L K+  +          P +  T  ++E S
Sbjct: 150 NVSVTVTPTSKKSITDYGTPEEFLSTVDYLLGKQAYSGKTASEGGFDPDSVATANILEVS 209

Query: 182 EHDIDGKAYYTFEFV---AQAPNYTRHALSTIVVANGKFYTLTTGANERRWEK-MKDKLR 232
              + GK YY    +   A      +H + +  V +GK Y     A ++RW K  K  + 
Sbjct: 210 TPVVGGKQYYNISVLTRTADGDEGGKHHVISATVTDGKLYICKAQAGDKRWFKGAKKFVE 264

[Close]

BLAST of CmoCh15G004280 vs. ExPASy Swiss-Prot
Match: P12302 (Oxygen-evolving enhancer protein 2, chloroplastic OS=Spinacia oleracea OX=3562 GN=PSBP PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 9.6e-07
Identity = 60/242 (24.79%), Postives = 101/242 (41.74%), Query Frame = 0


Query: 16  AQKQIISLFNSCSVFLADRLGRRQLLAGSAFITWIYLADM---NSMSFAAETKKGFLSVS 75
           AQKQ  +  N  +  ++ RL    L+  +A  + +  AD     + +   + KK    + 
Sbjct: 42  AQKQDDNEANVLNSGVSRRLALTVLIGAAAVGSKVSPADAAYGEAANVFGKPKKNTEFMP 101

Query: 76  DKKDGYSFVYPFGWQHKKHVLKHFIHSSEQEVVIDGQDKVFKDVIEPLENVSVNMIPTSK 135
              DG+  + P  W   K            E    GQ   ++D  +   N+SV + PT K
Sbjct: 102 YNGDGFKLLVPSKWNPSK------------EKEFPGQVLRYEDNFDATSNLSVLVQPTDK 161

Query: 136 EDIRDFGSPQ----QIAETLIKK---------------VLAPSNQRTKLIEASEHDIDGK 195
           + I DFGSP+    Q+   L K+               V+A +N    ++E+S   +DGK
Sbjct: 162 KSITDFGSPEDFLSQVDYLLGKQAYFGKTDSEGGFDSGVVASAN----VLESSTPVVDGK 221

Query: 196 AYYTFEFV---AQAPNYTRHALSTIVVANGKFYTLTTGANERRWEK-MKDKLRTVVDSFT 232
            YY+   +   A      +H +    V +GK Y     A ++RW K  K  + +   SF+
Sbjct: 222 QYYSITVLTRTADGDEGGKHQVIAATVKDGKLYICKAQAGDKRWFKGAKKFVESATSSFS 267

[Close]

BLAST of CmoCh15G004280 vs. ExPASy TrEMBL
Match: A0A6J1FN44 (psbP-like protein 1, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111445433 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 3.0e-96
Identity = 186/201 (92.54%), Postives = 186/201 (92.54%), Query Frame = 0


Query: 33  DRLGRRQLLAGSAFITWIYLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQHKKHV 92
           DRLGRRQLLAGSAFITWIYLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGW      
Sbjct: 57  DRLGRRQLLAGSAFITWIYLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGW------ 116

Query: 93  LKHFIHSSEQEVVIDGQDKVFKDVIEPLENVSVNMIPTSKEDIRDFGSPQQIAETLIKKV 152
                    QEVVIDGQDKVFKDVIEPLENVSVNMIPTSKEDIRDFGSPQQIAETLIKKV
Sbjct: 117 ---------QEVVIDGQDKVFKDVIEPLENVSVNMIPTSKEDIRDFGSPQQIAETLIKKV 176

Query: 153 LAPSNQRTKLIEASEHDIDGKAYYTFEFVAQAPNYTRHALSTIVVANGKFYTLTTGANER 212
           LAPSNQRTKLIEASEHDIDGKAYYTFEFVAQAPNYTRHALSTIVVANGKFYTLTTGANER
Sbjct: 177 LAPSNQRTKLIEASEHDIDGKAYYTFEFVAQAPNYTRHALSTIVVANGKFYTLTTGANER 236

Query: 213 RWEKMKDKLRTVVDSFTISKV 234
           RWEKMKDKLRTVVDSFTISKV
Sbjct: 237 RWEKMKDKLRTVVDSFTISKV 242

[Close]

BLAST of CmoCh15G004280 vs. ExPASy TrEMBL
Match: A0A6J1FHM7 (psbP-like protein 1, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445433 PE=4 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 1.5e-95
Identity = 185/200 (92.50%), Postives = 185/200 (92.50%), Query Frame = 0


Query: 34  RLGRRQLLAGSAFITWIYLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQHKKHVL 93
           RLGRRQLLAGSAFITWIYLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGW       
Sbjct: 67  RLGRRQLLAGSAFITWIYLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGW------- 126

Query: 94  KHFIHSSEQEVVIDGQDKVFKDVIEPLENVSVNMIPTSKEDIRDFGSPQQIAETLIKKVL 153
                   QEVVIDGQDKVFKDVIEPLENVSVNMIPTSKEDIRDFGSPQQIAETLIKKVL
Sbjct: 127 --------QEVVIDGQDKVFKDVIEPLENVSVNMIPTSKEDIRDFGSPQQIAETLIKKVL 186

Query: 154 APSNQRTKLIEASEHDIDGKAYYTFEFVAQAPNYTRHALSTIVVANGKFYTLTTGANERR 213
           APSNQRTKLIEASEHDIDGKAYYTFEFVAQAPNYTRHALSTIVVANGKFYTLTTGANERR
Sbjct: 187 APSNQRTKLIEASEHDIDGKAYYTFEFVAQAPNYTRHALSTIVVANGKFYTLTTGANERR 246

Query: 214 WEKMKDKLRTVVDSFTISKV 234
           WEKMKDKLRTVVDSFTISKV
Sbjct: 247 WEKMKDKLRTVVDSFTISKV 251

[Close]

BLAST of CmoCh15G004280 vs. ExPASy TrEMBL
Match: A0A6J1JSB4 (psbP-like protein 1, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111489333 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 4.4e-95
Identity = 184/201 (91.54%), Postives = 184/201 (91.54%), Query Frame = 0


Query: 33  DRLGRRQLLAGSAFITWIYLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQHKKHV 92
           DRLGRRQLLAGSAFITWIYLADMN MSFAAETKKGFLSVSDKKDGYSFVYPFGW      
Sbjct: 57  DRLGRRQLLAGSAFITWIYLADMNFMSFAAETKKGFLSVSDKKDGYSFVYPFGW------ 116

Query: 93  LKHFIHSSEQEVVIDGQDKVFKDVIEPLENVSVNMIPTSKEDIRDFGSPQQIAETLIKKV 152
                    QEVVIDGQDKVFKDVIEPLENVSVNMIPTSKEDIRDFGSPQQIAETLIKKV
Sbjct: 117 ---------QEVVIDGQDKVFKDVIEPLENVSVNMIPTSKEDIRDFGSPQQIAETLIKKV 176

Query: 153 LAPSNQRTKLIEASEHDIDGKAYYTFEFVAQAPNYTRHALSTIVVANGKFYTLTTGANER 212
           LAPSNQRTKLIEASEHDIDGKAYYTFEFVAQAPNYTRHALSTI VANGKFYTLTTGANER
Sbjct: 177 LAPSNQRTKLIEASEHDIDGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANER 236

Query: 213 RWEKMKDKLRTVVDSFTISKV 234
           RWEKMKDKLRTVVDSFTISKV
Sbjct: 237 RWEKMKDKLRTVVDSFTISKV 242

[Close]

BLAST of CmoCh15G004280 vs. ExPASy TrEMBL
Match: A0A6J1JVV0 (psbP-like protein 1, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489333 PE=4 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 2.2e-94
Identity = 183/200 (91.50%), Postives = 183/200 (91.50%), Query Frame = 0


Query: 34  RLGRRQLLAGSAFITWIYLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQHKKHVL 93
           RLGRRQLLAGSAFITWIYLADMN MSFAAETKKGFLSVSDKKDGYSFVYPFGW       
Sbjct: 67  RLGRRQLLAGSAFITWIYLADMNFMSFAAETKKGFLSVSDKKDGYSFVYPFGW------- 126

Query: 94  KHFIHSSEQEVVIDGQDKVFKDVIEPLENVSVNMIPTSKEDIRDFGSPQQIAETLIKKVL 153
                   QEVVIDGQDKVFKDVIEPLENVSVNMIPTSKEDIRDFGSPQQIAETLIKKVL
Sbjct: 127 --------QEVVIDGQDKVFKDVIEPLENVSVNMIPTSKEDIRDFGSPQQIAETLIKKVL 186

Query: 154 APSNQRTKLIEASEHDIDGKAYYTFEFVAQAPNYTRHALSTIVVANGKFYTLTTGANERR 213
           APSNQRTKLIEASEHDIDGKAYYTFEFVAQAPNYTRHALSTI VANGKFYTLTTGANERR
Sbjct: 187 APSNQRTKLIEASEHDIDGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERR 246

Query: 214 WEKMKDKLRTVVDSFTISKV 234
           WEKMKDKLRTVVDSFTISKV
Sbjct: 247 WEKMKDKLRTVVDSFTISKV 251

[Close]

BLAST of CmoCh15G004280 vs. ExPASy TrEMBL
Match: A0A0A0KS54 (PsbP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G505230 PE=4 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 1.0e-91
Identity = 176/201 (87.56%), Postives = 182/201 (90.55%), Query Frame = 0


Query: 33  DRLGRRQLLAGSAFITWIYLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQHKKHV 92
           DRLGRRQLL+GSAFITWI LADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGW      
Sbjct: 51  DRLGRRQLLSGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGW------ 110

Query: 93  LKHFIHSSEQEVVIDGQDKVFKDVIEPLENVSVNMIPTSKEDIRDFGSPQQIAETLIKKV 152
                    QEVVIDGQDKVFKDVIEPLENVSVN+IPTSKEDIRDFG PQQ+AETLIKKV
Sbjct: 111 ---------QEVVIDGQDKVFKDVIEPLENVSVNLIPTSKEDIRDFGPPQQVAETLIKKV 170

Query: 153 LAPSNQRTKLIEASEHDIDGKAYYTFEFVAQAPNYTRHALSTIVVANGKFYTLTTGANER 212
           LAPSNQ+TKLIEASEHD++GKAYYTFEFVAQAPNYTRHALSTI VANGKFYTLTTGANER
Sbjct: 171 LAPSNQKTKLIEASEHDVNGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANER 230

Query: 213 RWEKMKDKLRTVVDSFTISKV 234
           RWEKMKDKLRTVVDSFTIS V
Sbjct: 231 RWEKMKDKLRTVVDSFTISSV 236

[Close]

BLAST of CmoCh15G004280 vs. NCBI nr
Match: XP_022939580.1 (psbP-like protein 1, chloroplastic isoform X2 [Cucurbita moschata])

HSP 1 Score: 361.3 bits (926), Expect = 6.3e-96
Identity = 186/201 (92.54%), Postives = 186/201 (92.54%), Query Frame = 0


Query: 33  DRLGRRQLLAGSAFITWIYLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQHKKHV 92
           DRLGRRQLLAGSAFITWIYLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGW      
Sbjct: 57  DRLGRRQLLAGSAFITWIYLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGW------ 116

Query: 93  LKHFIHSSEQEVVIDGQDKVFKDVIEPLENVSVNMIPTSKEDIRDFGSPQQIAETLIKKV 152
                    QEVVIDGQDKVFKDVIEPLENVSVNMIPTSKEDIRDFGSPQQIAETLIKKV
Sbjct: 117 ---------QEVVIDGQDKVFKDVIEPLENVSVNMIPTSKEDIRDFGSPQQIAETLIKKV 176

Query: 153 LAPSNQRTKLIEASEHDIDGKAYYTFEFVAQAPNYTRHALSTIVVANGKFYTLTTGANER 212
           LAPSNQRTKLIEASEHDIDGKAYYTFEFVAQAPNYTRHALSTIVVANGKFYTLTTGANER
Sbjct: 177 LAPSNQRTKLIEASEHDIDGKAYYTFEFVAQAPNYTRHALSTIVVANGKFYTLTTGANER 236

Query: 213 RWEKMKDKLRTVVDSFTISKV 234
           RWEKMKDKLRTVVDSFTISKV
Sbjct: 237 RWEKMKDKLRTVVDSFTISKV 242

[Close]

BLAST of CmoCh15G004280 vs. NCBI nr
Match: KAG7016254.1 (PsbP-like protein 1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 359.8 bits (922), Expect = 1.8e-95
Identity = 185/201 (92.04%), Postives = 185/201 (92.04%), Query Frame = 0


Query: 33  DRLGRRQLLAGSAFITWIYLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQHKKHV 92
           DRLGRRQLLAGSAFITWIYLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGW      
Sbjct: 57  DRLGRRQLLAGSAFITWIYLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGW------ 116

Query: 93  LKHFIHSSEQEVVIDGQDKVFKDVIEPLENVSVNMIPTSKEDIRDFGSPQQIAETLIKKV 152
                    QEVVIDGQDKVFKDVIEPLENVSVNMIPTSKEDIRDFGSPQQIAETLIKKV
Sbjct: 117 ---------QEVVIDGQDKVFKDVIEPLENVSVNMIPTSKEDIRDFGSPQQIAETLIKKV 176

Query: 153 LAPSNQRTKLIEASEHDIDGKAYYTFEFVAQAPNYTRHALSTIVVANGKFYTLTTGANER 212
           LAPSNQRTKLIEASEHDIDGKAYYTFEFVAQAPNYTRHALSTI VANGKFYTLTTGANER
Sbjct: 177 LAPSNQRTKLIEASEHDIDGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANER 236

Query: 213 RWEKMKDKLRTVVDSFTISKV 234
           RWEKMKDKLRTVVDSFTISKV
Sbjct: 237 RWEKMKDKLRTVVDSFTISKV 242

[Close]

BLAST of CmoCh15G004280 vs. NCBI nr
Match: XP_023551143.1 (psbP-like protein 1, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 359.8 bits (922), Expect = 1.8e-95
Identity = 185/201 (92.04%), Postives = 185/201 (92.04%), Query Frame = 0


Query: 33  DRLGRRQLLAGSAFITWIYLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQHKKHV 92
           DRLGRRQLLAGSAFITWIYLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGW      
Sbjct: 57  DRLGRRQLLAGSAFITWIYLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGW------ 116

Query: 93  LKHFIHSSEQEVVIDGQDKVFKDVIEPLENVSVNMIPTSKEDIRDFGSPQQIAETLIKKV 152
                    QEVVIDGQDKVFKDVIEPLENVSVNMIPTSKEDIRDFGSPQQIAETLIKKV
Sbjct: 117 ---------QEVVIDGQDKVFKDVIEPLENVSVNMIPTSKEDIRDFGSPQQIAETLIKKV 176

Query: 153 LAPSNQRTKLIEASEHDIDGKAYYTFEFVAQAPNYTRHALSTIVVANGKFYTLTTGANER 212
           LAPSNQRTKLIEASEHDIDGKAYYTFEFVAQAPNYTRHALSTI VANGKFYTLTTGANER
Sbjct: 177 LAPSNQRTKLIEASEHDIDGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANER 236

Query: 213 RWEKMKDKLRTVVDSFTISKV 234
           RWEKMKDKLRTVVDSFTISKV
Sbjct: 237 RWEKMKDKLRTVVDSFTISKV 242

[Close]

BLAST of CmoCh15G004280 vs. NCBI nr
Match: XP_022939579.1 (psbP-like protein 1, chloroplastic isoform X1 [Cucurbita moschata])

HSP 1 Score: 359.0 bits (920), Expect = 3.1e-95
Identity = 185/200 (92.50%), Postives = 185/200 (92.50%), Query Frame = 0


Query: 34  RLGRRQLLAGSAFITWIYLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQHKKHVL 93
           RLGRRQLLAGSAFITWIYLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGW       
Sbjct: 67  RLGRRQLLAGSAFITWIYLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGW------- 126

Query: 94  KHFIHSSEQEVVIDGQDKVFKDVIEPLENVSVNMIPTSKEDIRDFGSPQQIAETLIKKVL 153
                   QEVVIDGQDKVFKDVIEPLENVSVNMIPTSKEDIRDFGSPQQIAETLIKKVL
Sbjct: 127 --------QEVVIDGQDKVFKDVIEPLENVSVNMIPTSKEDIRDFGSPQQIAETLIKKVL 186

Query: 154 APSNQRTKLIEASEHDIDGKAYYTFEFVAQAPNYTRHALSTIVVANGKFYTLTTGANERR 213
           APSNQRTKLIEASEHDIDGKAYYTFEFVAQAPNYTRHALSTIVVANGKFYTLTTGANERR
Sbjct: 187 APSNQRTKLIEASEHDIDGKAYYTFEFVAQAPNYTRHALSTIVVANGKFYTLTTGANERR 246

Query: 214 WEKMKDKLRTVVDSFTISKV 234
           WEKMKDKLRTVVDSFTISKV
Sbjct: 247 WEKMKDKLRTVVDSFTISKV 251

[Close]

BLAST of CmoCh15G004280 vs. NCBI nr
Match: XP_023551141.1 (psbP-like protein 1, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 357.5 bits (916), Expect = 9.0e-95
Identity = 184/200 (92.00%), Postives = 184/200 (92.00%), Query Frame = 0


Query: 34  RLGRRQLLAGSAFITWIYLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQHKKHVL 93
           RLGRRQLLAGSAFITWIYLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGW       
Sbjct: 67  RLGRRQLLAGSAFITWIYLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGW------- 126

Query: 94  KHFIHSSEQEVVIDGQDKVFKDVIEPLENVSVNMIPTSKEDIRDFGSPQQIAETLIKKVL 153
                   QEVVIDGQDKVFKDVIEPLENVSVNMIPTSKEDIRDFGSPQQIAETLIKKVL
Sbjct: 127 --------QEVVIDGQDKVFKDVIEPLENVSVNMIPTSKEDIRDFGSPQQIAETLIKKVL 186

Query: 154 APSNQRTKLIEASEHDIDGKAYYTFEFVAQAPNYTRHALSTIVVANGKFYTLTTGANERR 213
           APSNQRTKLIEASEHDIDGKAYYTFEFVAQAPNYTRHALSTI VANGKFYTLTTGANERR
Sbjct: 187 APSNQRTKLIEASEHDIDGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERR 246

Query: 214 WEKMKDKLRTVVDSFTISKV 234
           WEKMKDKLRTVVDSFTISKV
Sbjct: 247 WEKMKDKLRTVVDSFTISKV 251

[Close]

BLAST of CmoCh15G004280 vs. TAIR 10
Match: AT3G55330.1 (PsbP-like protein 1 )

HSP 1 Score: 262.7 bits (670), Expect = 2.8e-70
Identity = 132/207 (63.77%), Postives = 155/207 (74.88%), Query Frame = 0


Query: 25  NSCSVFLADRLGRRQLLAGSAFITWIYLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPF 84
           +S S  L D+  RR ++       WI L     +SFAAE+KKGFL+VSD KD Y+F+YPF
Sbjct: 38  SSSSSHLQDKCQRRLIVTFGVVAPWISLLSRAPLSFAAESKKGFLAVSDNKDAYAFLYPF 97

Query: 85  GWQHKKHVLKHFIHSSEQEVVIDGQDKVFKDVIEPLENVSVNMIPTSKEDIRDFGSPQQI 144
           GW               QEVVI+GQDKV+KDVIEPLE+VSVN++PTSK+ I++FG P+QI
Sbjct: 98  GW---------------QEVVIEGQDKVYKDVIEPLESVSVNLVPTSKQTIKEFGPPKQI 157

Query: 145 AETLIKKVLAPSNQRTKLIEASEHDIDGKAYYTFEFVAQAPNYTRHALSTIVVANGKFYT 204
           AETLIKKVLAP NQ+T LI+ASEHD+DGK YY FEF  QA NYTRHAL TI V NG FYT
Sbjct: 158 AETLIKKVLAPPNQKTTLIDASEHDVDGKTYYQFEFTVQARNYTRHALGTITVFNGNFYT 217

Query: 205 LTTGANERRWEKMKDKLRTVVDSFTIS 232
           LTTGANERRWEKMKD+L TVVDSF I+
Sbjct: 218 LTTGANERRWEKMKDRLHTVVDSFKIT 229

[Close]

BLAST of CmoCh15G004280 vs. TAIR 10
Match: AT2G39470.1 (PsbP-like protein 2 )

HSP 1 Score: 122.1 bits (305), Expect = 5.9e-28
Identity = 69/197 (35.03%), Postives = 98/197 (49.75%), Query Frame = 0


Query: 37  RRQLLAGSAFITWIYLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQHKKHVLKHF 96
           RRQ L G    T +  +   ++  A E  K +    D++DGYS+ YP  W          
Sbjct: 59  RRQALVGVG--TLVATSIPATLLLAEEIPKSYSPFVDREDGYSYYYPSDW---------- 118

Query: 97  IHSSEQEVVIDGQDKVFKDVIEPLENVSVNMIPTSKEDIRDFGSPQQIAETLIKKVLAPS 156
                +E      D  FKD    L+NV V  IPT K DI + G  +++   L+K   A  
Sbjct: 119 -----REFDFRAHDSAFKDRYLQLQNVRVRFIPTEKNDIHEVGPMEEVVYDLVKHKFAAP 178

Query: 157 NQRTKLIEASEHDIDGKAYYTFEFVAQAPNYTRHALSTIVVANGKFYTLTTGANERRWEK 216
           NQ   + +  E   DGK YYTFE+  + P Y   + +T+ V N ++YTL  GANERRW K
Sbjct: 179 NQVATIYDMKERVEDGKNYYTFEYGLRTPIYATTSFATVAVGNNRYYTLIVGANERRWRK 238

Query: 217 MKDKLRTVVDSFTISKV 234
           +K +L+ V DS  I ++
Sbjct: 239 VKKQLQVVADSLKILQI 238

[Close]

BLAST of CmoCh15G004280 vs. TAIR 10
Match: AT2G39470.2 (PsbP-like protein 2 )

HSP 1 Score: 122.1 bits (305), Expect = 5.9e-28
Identity = 69/197 (35.03%), Postives = 98/197 (49.75%), Query Frame = 0


Query: 37  RRQLLAGSAFITWIYLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQHKKHVLKHF 96
           RRQ L G    T +  +   ++  A E  K +    D++DGYS+ YP  W          
Sbjct: 51  RRQALVGVG--TLVATSIPATLLLAEEIPKSYSPFVDREDGYSYYYPSDW---------- 110

Query: 97  IHSSEQEVVIDGQDKVFKDVIEPLENVSVNMIPTSKEDIRDFGSPQQIAETLIKKVLAPS 156
                +E      D  FKD    L+NV V  IPT K DI + G  +++   L+K   A  
Sbjct: 111 -----REFDFRAHDSAFKDRYLQLQNVRVRFIPTEKNDIHEVGPMEEVVYDLVKHKFAAP 170

Query: 157 NQRTKLIEASEHDIDGKAYYTFEFVAQAPNYTRHALSTIVVANGKFYTLTTGANERRWEK 216
           NQ   + +  E   DGK YYTFE+  + P Y   + +T+ V N ++YTL  GANERRW K
Sbjct: 171 NQVATIYDMKERVEDGKNYYTFEYGLRTPIYATTSFATVAVGNNRYYTLIVGANERRWRK 230

Query: 217 MKDKLRTVVDSFTISKV 234
           +K +L+ V DS  I ++
Sbjct: 231 VKKQLQVVADSLKILQI 230

[Close]

BLAST of CmoCh15G004280 vs. TAIR 10
Match: AT2G39470.3 (PsbP-like protein 2 )

HSP 1 Score: 58.9 bits (141), Expect = 6.2e-09
Identity = 39/131 (29.77%), Postives = 56/131 (42.75%), Query Frame = 0


Query: 37  RRQLLAGSAFITWIYLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQHKKHVLKHF 96
           RRQ L G    T +  +   ++  A E  K +    D++DGYS+ YP  W          
Sbjct: 51  RRQALVGVG--TLVATSIPATLLLAEEIPKSYSPFVDREDGYSYYYPSDW---------- 110

Query: 97  IHSSEQEVVIDGQDKVFKDVIEPLENVSVNMIPTSKEDIRDFGSPQQIAETLIKKVLAPS 156
                +E      D  FKD    L+NV V  IPT K DI + G  +++   L+K   A  
Sbjct: 111 -----REFDFRAHDSAFKDRYLQLQNVRVRFIPTEKNDIHEVGPMEEVVYDLVKHKFAAP 164

Query: 157 NQRTKLIEASE 168
           NQ   + +  E
Sbjct: 171 NQVATIYDMKE 164

[Close]

BLAST of CmoCh15G004280 vs. TAIR 10
Match: AT1G06680.1 (photosystem II subunit P-1 )

HSP 1 Score: 53.9 bits (128), Expect = 2.0e-07
Identity = 44/175 (25.14%), Postives = 70/175 (40.00%), Query Frame = 0


Query: 76  DGYSFVYPFGWQHKKHVLKHFIHSSEQEVVIDGQDKVFKDVIEPLENVSVNMIPTSKEDI 135
           DG+    P  W   K            E+   GQ   F+D  +   N++V + PT K+ I
Sbjct: 101 DGFKVQVPAKWNPSK------------EIEYPGQVLRFEDNFDATSNLNVMVTPTDKKSI 160

Query: 136 RDFGSPQ----QIAETLIKKVLAPSN-----------QRTKLIEASEHDIDGKAYYTFEF 195
            D+GSP+    Q+   L K+                     ++E+S  ++ GK YY    
Sbjct: 161 TDYGSPEEFLSQVNYLLGKQAYFGETASEGGFDNNAVATANILESSSQEVGGKPYYYLSV 220

Query: 196 V---AQAPNYTRHALSTIVVANGKFYTLTTGANERRWEKMKDK-LRTVVDSFTIS 232
           +   A      +H L T  V  GK Y     A ++RW K   K + +   SF+++
Sbjct: 221 LTRTADGDEGGKHQLITATVNGGKLYICKAQAGDKRWFKGARKFVESAATSFSVA 263

The following BLAST results are available for this feature:

BLAST of CmoCh15G004280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P82538	4.0e-69	63.77	PsbP-like protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPL1 PE=1 ...	[more]
O80634	8.4e-27	35.03	Photosynthetic NDH subunit of lumenal location 1, chloroplastic OS=Arabidopsis t...	[more]
Q40407	4.6e-09	26.00	Oxygen-evolving enhancer protein 2, chloroplastic OS=Narcissus pseudonarcissus O...	[more]
O49080	8.7e-08	26.46	Oxygen-evolving enhancer protein 2, chloroplastic OS=Fritillaria agrestis OX=641...	[more]
P12302	9.6e-07	24.79	Oxygen-evolving enhancer protein 2, chloroplastic OS=Spinacia oleracea OX=3562 G...	[more]

BLAST of CmoCh15G004280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FN44	3.0e-96	92.54	psbP-like protein 1, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1FHM7	1.5e-95	92.50	psbP-like protein 1, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1JSB4	4.4e-95	91.54	psbP-like protein 1, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1JVV0	2.2e-94	91.50	psbP-like protein 1, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A0A0KS54	1.0e-91	87.56	PsbP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G505230 PE=4 S...	[more]

BLAST of CmoCh15G004280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022939580.1	6.3e-96	92.54	psbP-like protein 1, chloroplastic isoform X2 [Cucurbita moschata]	[more]
KAG7016254.1	1.8e-95	92.04	PsbP-like protein 1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023551143.1	1.8e-95	92.04	psbP-like protein 1, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022939579.1	3.1e-95	92.50	psbP-like protein 1, chloroplastic isoform X1 [Cucurbita moschata]	[more]
XP_023551141.1	9.0e-95	92.00	psbP-like protein 1, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmoCh15G004280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G55330.1	2.8e-70	63.77	PsbP-like protein 1	[more]
AT2G39470.1	5.9e-28	35.03	PsbP-like protein 2	[more]
AT2G39470.2	5.9e-28	35.03	PsbP-like protein 2	[more]
AT2G39470.3	6.2e-09	29.77	PsbP-like protein 2	[more]
AT1G06680.1	2.0e-07	25.14	photosystem II subunit P-1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002683	PsbP, C-terminal	PFAM	PF01789	PsbP	coord: 67..230 e-value: 1.9E-46 score: 158.0
None	No IPR available	GENE3D	3.40.1000.10	Mog1/PsbP, alpha/beta/alpha sandwich	coord: 55..231 e-value: 2.2E-48 score: 166.5
None	No IPR available	PANTHER	PTHR31407:SF4	PSBP-LIKE PROTEIN 1, CHLOROPLASTIC	coord: 28..231
None	No IPR available	PANTHER	PTHR31407	FAMILY NOT NAMED	coord: 28..231
IPR016123	Mog1/PsbP, alpha/beta/alpha sandwich	SUPERFAMILY	55724	Mog1p/PsbP-like	coord: 71..230

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh15G004280.1	CmoCh15G004280.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0019898	extrinsic component of membrane
cellular_component	GO:0009654	photosystem II oxygen evolving complex
cellular_component	GO:0009523	photosystem II
molecular_function	GO:0005509	calcium ion binding