CmoCh15G003610 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh15G003610
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Isocitrate dehydrogenase [NADP]
Location	Cmo_Chr15: 1690041 .. 1690754 (-)
RNA-Seq Expression	CmoCh15G003610
Synteny	CmoCh15G003610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGTTTGGTGAGCTAATTTTCTTTTCTTCACTTATTCTCATGTATTGCTCTGGACAACTGTTTTCTCATCCCCAAACTTTTTAGTATCTTTCTACTCTTTTCTTTTTTGTTTTTCATTTTTTGTTTCTATGCAGTTCCAGAAAATGGGGAGACACCGAGAGAGCTCGAGGTTTATGACTTCAAAGGACCAGGCATTGGGCTTACGATGTATAATGTTGACGAGGTTGGTTTTTTATTTATTTCTTCGAACTTGTTGATTTTTTGTATCACATAAATTACTCTTTTAACTCGTTCCCATGCAATTGGCAGTCTATTCAAGCATTTGCAGAGTCCTCAATGTCACTGGCATTTGAGAAGAAGTGGCCCTTGTATCTGAGCACTAAGAATACAATTCTTAAGAAATATGATGGCAGGTATTTCTTACTTCGTTCCCTGTACCTAGTTGCTTATGCTGTTTATATCTACTTTCTGTTTCCTAGAAATCGTCAAAGTGATCATTTATTTTAATACTGCCCTGCAGGTTTAAAGATATATTTCAAGAAGTGTACGAGGAAAAGTGGAAGCAGAAGTTTGAAGAAAATTTGATATGGTTCATTACATTTAAATACATGATTCTCTACAGTTATGCCTAATCTATTTGCCTATGGCTGAATATATTTTTCTTCGGCATTTAGGTGCGAACATTGGCTTATTGATGACATGGTAGCTTAG

mRNA sequence

ATGGTGTTTGTTCCAGAAAATGGGGAGACACCGAGAGAGCTCGAGGTTTATGACTTCAAAGGACCAGGCATTGGGCTTACGATGTATAATGTTGACGAGTCTATTCAAGCATTTGCAGAGTCCTCAATGTCACTGGCATTTGAGAAGAAGTGGCCCTTGTATCTGAGCACTAAGAATACAATTCTTAAGAAATATGATGGCAGGTTTAAAGATATATTTCAAGAAGTGTACGAGGAAAAGTGGAAGCAGAAGTTTGAAGAAAATTTGATATGGTGCGAACATTGGCTTATTGATGACATGGTAGCTTAG

Coding sequence (CDS)

ATGGTGTTTGTTCCAGAAAATGGGGAGACACCGAGAGAGCTCGAGGTTTATGACTTCAAAGGACCAGGCATTGGGCTTACGATGTATAATGTTGACGAGTCTATTCAAGCATTTGCAGAGTCCTCAATGTCACTGGCATTTGAGAAGAAGTGGCCCTTGTATCTGAGCACTAAGAATACAATTCTTAAGAAATATGATGGCAGGTTTAAAGATATATTTCAAGAAGTGTACGAGGAAAAGTGGAAGCAGAAGTTTGAAGAAAATTTGATATGGTGCGAACATTGGCTTATTGATGACATGGTAGCTTAG

Protein sequence

MVFVPENGETPRELEVYDFKGPGIGLTMYNVDESIQAFAESSMSLAFEKKWPLYLSTKNTILKKYDGRFKDIFQEVYEEKWKQKFEENLIWCEHWLIDDMVA

Homology

[Close]

BLAST of CmoCh15G003610 vs. ExPASy Swiss-Prot
Match: Q8LPJ5 (Isocitrate dehydrogenase [NADP], chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g14590 PE=1 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 1.6e-43
Identity = 83/102 (81.37%), Postives = 90/102 (88.24%), Query Frame = 0


Query: 1   MVFVPENGETPRELEVYDFKGPGIGLTMYNVDESIQAFAESSMSLAFEKKWPLYLSTKNT 60
           MVFVPE+G  P EL+VYDFKGPG+ L MYNVDESI+AFAESSM++A  KKWPLYLSTKNT
Sbjct: 226 MVFVPEDGNAPVELDVYDFKGPGVALAMYNVDESIRAFAESSMAMALTKKWPLYLSTKNT 285

Query: 61  ILKKYDGRFKDIFQEVYEEKWKQKFEENLIWCEHWLIDDMVA 103
           ILKKYDGRFKDIFQEVYE  WKQKFEE+ IW EH LIDDMVA
Sbjct: 286 ILKKYDGRFKDIFQEVYEANWKQKFEEHSIWYEHRLIDDMVA 327

[Close]

BLAST of CmoCh15G003610 vs. ExPASy Swiss-Prot
Match: P50217 (Isocitrate dehydrogenase [NADP] OS=Solanum tuberosum OX=4113 GN=ICDH-1 PE=2 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 1.9e-36
Identity = 72/103 (69.90%), Postives = 85/103 (82.52%), Query Frame = 0


Query: 1   MVFVPENGETPRELEVYDFKGP-GIGLTMYNVDESIQAFAESSMSLAFEKKWPLYLSTKN 60
           +VFVPE  +   E EVY+F G  G+ L+MYN DES+++FAE+SM++AF+KKWPLYLSTKN
Sbjct: 156 LVFVPEGSDEKTEFEVYNFTGAGGVALSMYNTDESVRSFAEASMNMAFQKKWPLYLSTKN 215

Query: 61  TILKKYDGRFKDIFQEVYEEKWKQKFEENLIWCEHWLIDDMVA 103
           TILKKYDGRFKDIFQEVYE  WK K+EE  IW EH LIDDMVA
Sbjct: 216 TILKKYDGRFKDIFQEVYEANWKSKYEEAGIWYEHRLIDDMVA 258

[Close]

BLAST of CmoCh15G003610 vs. ExPASy Swiss-Prot
Match: P50218 (Isocitrate dehydrogenase [NADP] OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 2.1e-35
Identity = 70/103 (67.96%), Postives = 84/103 (81.55%), Query Frame = 0


Query: 1   MVFVPENGETPRELEVYDFKGP-GIGLTMYNVDESIQAFAESSMSLAFEKKWPLYLSTKN 60
           +VFVPE  +   E EVY+F G  G+ L+MYN DES+++FAE+SM++A++KKWPLYLSTKN
Sbjct: 156 LVFVPEGTDEKTEFEVYNFTGAGGVALSMYNTDESVRSFAEASMNMAYQKKWPLYLSTKN 215

Query: 61  TILKKYDGRFKDIFQEVYEEKWKQKFEENLIWCEHWLIDDMVA 103
           TILKKYDGRFKDIFQEVYE  WK K+EE  IW EH LIDDM A
Sbjct: 216 TILKKYDGRFKDIFQEVYEANWKSKYEEAGIWYEHRLIDDMAA 258

[Close]

BLAST of CmoCh15G003610 vs. ExPASy Swiss-Prot
Match: Q40345 (Isocitrate dehydrogenase [NADP], chloroplastic (Fragment) OS=Medicago sativa OX=3879 PE=2 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 1.8e-34
Identity = 72/103 (69.90%), Postives = 82/103 (79.61%), Query Frame = 0


Query: 1   MVFVPENGETPRELEVYDFKGP-GIGLTMYNVDESIQAFAESSMSLAFEKKWPLYLSTKN 60
           +VFVPE      +LEVY+F G  G+ L MYN DESI++FAE+SM++A EKKWPLYLSTKN
Sbjct: 177 LVFVPEGQGETTDLEVYNFTGEGGVALAMYNTDESIRSFAEASMAVALEKKWPLYLSTKN 236

Query: 61  TILKKYDGRFKDIFQEVYEEKWKQKFEENLIWCEHWLIDDMVA 103
           TILKKYDGRFKDIFQEVYE  WK K+E   IW EH LIDDMVA
Sbjct: 237 TILKKYDGRFKDIFQEVYEAGWKSKYEAAGIWYEHRLIDDMVA 279

[Close]

BLAST of CmoCh15G003610 vs. ExPASy Swiss-Prot
Match: Q06197 (Isocitrate dehydrogenase [NADP] OS=Glycine max OX=3847 GN=IDH1 PE=1 SV=2)

HSP 1 Score: 145.6 bits (366), Expect = 3.1e-34
Identity = 72/103 (69.90%), Postives = 80/103 (77.67%), Query Frame = 0


Query: 1   MVFVPENGETPRELEVYDFKGP-GIGLTMYNVDESIQAFAESSMSLAFEKKWPLYLSTKN 60
           +VFVPE      E EV++F G  G+ L MYN DESI++FAE+SM+ A EKKWPLYLSTKN
Sbjct: 157 LVFVPEGQGEETEFEVFNFTGEGGVSLAMYNTDESIRSFAEASMATALEKKWPLYLSTKN 216

Query: 61  TILKKYDGRFKDIFQEVYEEKWKQKFEENLIWCEHWLIDDMVA 103
           TILKKYDGRFKDIFQEVYE  WK KFE   IW EH LIDDMVA
Sbjct: 217 TILKKYDGRFKDIFQEVYEASWKSKFEAAGIWYEHRLIDDMVA 259

[Close]

BLAST of CmoCh15G003610 vs. ExPASy TrEMBL
Match: A0A6J1HH92 (Isocitrate dehydrogenase [NADP] OS=Cucurbita moschata OX=3662 GN=LOC111463463 PE=3 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 5.1e-48
Identity = 97/102 (95.10%), Postives = 97/102 (95.10%), Query Frame = 0


Query: 1   MVFVPENGETPRELEVYDFKGPGIGLTMYNVDESIQAFAESSMSLAFEKKWPLYLSTKNT 60
           MVFVPENGETPRELEVYDFKGPGI LTMYNVDESIQAFAESSMSLAFEKKWPLYLSTKNT
Sbjct: 219 MVFVPENGETPRELEVYDFKGPGIALTMYNVDESIQAFAESSMSLAFEKKWPLYLSTKNT 278

Query: 61  ILKKYDGRFKDIFQEVYEEKWKQKFEENLIWCEHWLIDDMVA 103
           ILKKYDGRFKDIFQEVYEEKWKQKFEE  IW EH LIDDMVA
Sbjct: 279 ILKKYDGRFKDIFQEVYEEKWKQKFEEYSIWYEHRLIDDMVA 320

[Close]

BLAST of CmoCh15G003610 vs. ExPASy TrEMBL
Match: A0A5A7T3K6 (Isocitrate dehydrogenase [NADP] OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00550 PE=3 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 4.3e-47
Identity = 95/102 (93.14%), Postives = 97/102 (95.10%), Query Frame = 0


Query: 1   MVFVPENGETPRELEVYDFKGPGIGLTMYNVDESIQAFAESSMSLAFEKKWPLYLSTKNT 60
           MVFVPENGETPRELEVYDFKG GI LTMYNVD+SIQAFAESSMSLAFEKKWPLYLSTKNT
Sbjct: 209 MVFVPENGETPRELEVYDFKGSGIALTMYNVDKSIQAFAESSMSLAFEKKWPLYLSTKNT 268

Query: 61  ILKKYDGRFKDIFQEVYEEKWKQKFEENLIWCEHWLIDDMVA 103
           ILKKYDGRFKDIFQ+VYEEKWKQKFEEN IW EH LIDDMVA
Sbjct: 269 ILKKYDGRFKDIFQKVYEEKWKQKFEENSIWYEHRLIDDMVA 310

[Close]

BLAST of CmoCh15G003610 vs. ExPASy TrEMBL
Match: A0A1S3C8N1 (Isocitrate dehydrogenase [NADP] OS=Cucumis melo OX=3656 GN=LOC103498090 PE=3 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 4.3e-47
Identity = 95/102 (93.14%), Postives = 97/102 (95.10%), Query Frame = 0


Query: 1   MVFVPENGETPRELEVYDFKGPGIGLTMYNVDESIQAFAESSMSLAFEKKWPLYLSTKNT 60
           MVFVPENGETPRELEVYDFKG GI LTMYNVD+SIQAFAESSMSLAFEKKWPLYLSTKNT
Sbjct: 218 MVFVPENGETPRELEVYDFKGSGIALTMYNVDKSIQAFAESSMSLAFEKKWPLYLSTKNT 277

Query: 61  ILKKYDGRFKDIFQEVYEEKWKQKFEENLIWCEHWLIDDMVA 103
           ILKKYDGRFKDIFQ+VYEEKWKQKFEEN IW EH LIDDMVA
Sbjct: 278 ILKKYDGRFKDIFQKVYEEKWKQKFEENSIWYEHRLIDDMVA 319

[Close]

BLAST of CmoCh15G003610 vs. ExPASy TrEMBL
Match: A0A0A0KP32 (Isocitrate dehydrogenase [NADP] OS=Cucumis sativus OX=3659 GN=Csa_5G523180 PE=3 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 5.6e-47
Identity = 95/102 (93.14%), Postives = 96/102 (94.12%), Query Frame = 0


Query: 1   MVFVPENGETPRELEVYDFKGPGIGLTMYNVDESIQAFAESSMSLAFEKKWPLYLSTKNT 60
           MVFVPENGETPRELEVYDFKG GI L MYNVDESIQAFAESSMSLAFEKKWPLYLSTKNT
Sbjct: 220 MVFVPENGETPRELEVYDFKGSGIALAMYNVDESIQAFAESSMSLAFEKKWPLYLSTKNT 279

Query: 61  ILKKYDGRFKDIFQEVYEEKWKQKFEENLIWCEHWLIDDMVA 103
           ILKKYDGRFKDIFQ+VYEEKWKQKFEEN IW EH LIDDMVA
Sbjct: 280 ILKKYDGRFKDIFQKVYEEKWKQKFEENSIWYEHRLIDDMVA 321

[Close]

BLAST of CmoCh15G003610 vs. ExPASy TrEMBL
Match: A0A6J1JP31 (Isocitrate dehydrogenase [NADP] OS=Cucurbita maxima OX=3661 GN=LOC111487611 PE=3 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 2.1e-46
Identity = 94/102 (92.16%), Postives = 96/102 (94.12%), Query Frame = 0


Query: 1   MVFVPENGETPRELEVYDFKGPGIGLTMYNVDESIQAFAESSMSLAFEKKWPLYLSTKNT 60
           MVFVPE+GETPRELEVYDFKGPGI L MYNVDESIQAFAESSMSLAFEKKWPLYLSTKNT
Sbjct: 219 MVFVPEDGETPRELEVYDFKGPGIALAMYNVDESIQAFAESSMSLAFEKKWPLYLSTKNT 278

Query: 61  ILKKYDGRFKDIFQEVYEEKWKQKFEENLIWCEHWLIDDMVA 103
           ILKKYDGRFKDIFQ+VYEEKWKQKFEE  IW EH LIDDMVA
Sbjct: 279 ILKKYDGRFKDIFQKVYEEKWKQKFEEYSIWYEHRLIDDMVA 320

[Close]

BLAST of CmoCh15G003610 vs. NCBI nr
Match: KAG7016201.1 (Isocitrate dehydrogenase [NADP], chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 207.2 bits (526), Expect = 6.6e-50
Identity = 98/102 (96.08%), Postives = 100/102 (98.04%), Query Frame = 0


Query: 1   MVFVPENGETPRELEVYDFKGPGIGLTMYNVDESIQAFAESSMSLAFEKKWPLYLSTKNT 60
           MVFVPEN ETPRELEVYDFKGPGIGLTMYNVDESIQAFAESSMSLAFEKKWPLYLSTKNT
Sbjct: 180 MVFVPENVETPRELEVYDFKGPGIGLTMYNVDESIQAFAESSMSLAFEKKWPLYLSTKNT 239

Query: 61  ILKKYDGRFKDIFQEVYEEKWKQKFEENLIWCEHWLIDDMVA 103
           ILKKYDGRFKDIFQEVYEEKWKQKFEENLIW EHWLIDDM++
Sbjct: 240 ILKKYDGRFKDIFQEVYEEKWKQKFEENLIWYEHWLIDDMLS 281

[Close]

BLAST of CmoCh15G003610 vs. NCBI nr
Match: KAG6602427.1 (Isocitrate dehydrogenase [NADP], chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 199.9 bits (507), Expect = 1.1e-47
Identity = 97/102 (95.10%), Postives = 97/102 (95.10%), Query Frame = 0


Query: 1   MVFVPENGETPRELEVYDFKGPGIGLTMYNVDESIQAFAESSMSLAFEKKWPLYLSTKNT 60
           MVFVPENGETPRELEVYDFKGPGI LTMYNVDESIQAFAESSMSLAFEKKWPLYLSTKNT
Sbjct: 210 MVFVPENGETPRELEVYDFKGPGIALTMYNVDESIQAFAESSMSLAFEKKWPLYLSTKNT 269

Query: 61  ILKKYDGRFKDIFQEVYEEKWKQKFEENLIWCEHWLIDDMVA 103
           ILKKYDGRFKDIFQEVYEEKWKQKFEE  IW EH LIDDMVA
Sbjct: 270 ILKKYDGRFKDIFQEVYEEKWKQKFEEYSIWYEHRLIDDMVA 311

[Close]

BLAST of CmoCh15G003610 vs. NCBI nr
Match: XP_022963180.1 (isocitrate dehydrogenase [NADP]-like [Cucurbita moschata])

HSP 1 Score: 199.9 bits (507), Expect = 1.1e-47
Identity = 97/102 (95.10%), Postives = 97/102 (95.10%), Query Frame = 0


Query: 1   MVFVPENGETPRELEVYDFKGPGIGLTMYNVDESIQAFAESSMSLAFEKKWPLYLSTKNT 60
           MVFVPENGETPRELEVYDFKGPGI LTMYNVDESIQAFAESSMSLAFEKKWPLYLSTKNT
Sbjct: 219 MVFVPENGETPRELEVYDFKGPGIALTMYNVDESIQAFAESSMSLAFEKKWPLYLSTKNT 278

Query: 61  ILKKYDGRFKDIFQEVYEEKWKQKFEENLIWCEHWLIDDMVA 103
           ILKKYDGRFKDIFQEVYEEKWKQKFEE  IW EH LIDDMVA
Sbjct: 279 ILKKYDGRFKDIFQEVYEEKWKQKFEEYSIWYEHRLIDDMVA 320

[Close]

BLAST of CmoCh15G003610 vs. NCBI nr
Match: XP_038890600.1 (isocitrate dehydrogenase [NADP] isoform X2 [Benincasa hispida])

HSP 1 Score: 199.1 bits (505), Expect = 1.8e-47
Identity = 95/102 (93.14%), Postives = 97/102 (95.10%), Query Frame = 0


Query: 1   MVFVPENGETPRELEVYDFKGPGIGLTMYNVDESIQAFAESSMSLAFEKKWPLYLSTKNT 60
           MVF+PENGE PRELEVYDFKGPGI LTMYNVDESIQAFAESSMSLAFEKKWPLYLSTKNT
Sbjct: 219 MVFIPENGEAPRELEVYDFKGPGIALTMYNVDESIQAFAESSMSLAFEKKWPLYLSTKNT 278

Query: 61  ILKKYDGRFKDIFQEVYEEKWKQKFEENLIWCEHWLIDDMVA 103
           ILKKYDGRFKDIFQ+VYEEKWKQKFEEN IW EH LIDDMVA
Sbjct: 279 ILKKYDGRFKDIFQKVYEEKWKQKFEENSIWYEHRLIDDMVA 320

[Close]

BLAST of CmoCh15G003610 vs. NCBI nr
Match: XP_038890601.1 (isocitrate dehydrogenase [NADP], chloroplastic/mitochondrial isoform X3 [Benincasa hispida])

HSP 1 Score: 199.1 bits (505), Expect = 1.8e-47
Identity = 95/102 (93.14%), Postives = 97/102 (95.10%), Query Frame = 0


Query: 1   MVFVPENGETPRELEVYDFKGPGIGLTMYNVDESIQAFAESSMSLAFEKKWPLYLSTKNT 60
           MVF+PENGE PRELEVYDFKGPGI LTMYNVDESIQAFAESSMSLAFEKKWPLYLSTKNT
Sbjct: 137 MVFIPENGEAPRELEVYDFKGPGIALTMYNVDESIQAFAESSMSLAFEKKWPLYLSTKNT 196

Query: 61  ILKKYDGRFKDIFQEVYEEKWKQKFEENLIWCEHWLIDDMVA 103
           ILKKYDGRFKDIFQ+VYEEKWKQKFEEN IW EH LIDDMVA
Sbjct: 197 ILKKYDGRFKDIFQKVYEEKWKQKFEENSIWYEHRLIDDMVA 238

[Close]

BLAST of CmoCh15G003610 vs. TAIR 10
Match: AT5G14590.1 (Isocitrate/isopropylmalate dehydrogenase family protein )

HSP 1 Score: 176.4 bits (446), Expect = 1.2e-44
Identity = 83/102 (81.37%), Postives = 90/102 (88.24%), Query Frame = 0


Query: 1   MVFVPENGETPRELEVYDFKGPGIGLTMYNVDESIQAFAESSMSLAFEKKWPLYLSTKNT 60
           MVFVPE+G  P EL+VYDFKGPG+ L MYNVDESI+AFAESSM++A  KKWPLYLSTKNT
Sbjct: 226 MVFVPEDGNAPVELDVYDFKGPGVALAMYNVDESIRAFAESSMAMALTKKWPLYLSTKNT 285

Query: 61  ILKKYDGRFKDIFQEVYEEKWKQKFEENLIWCEHWLIDDMVA 103
           ILKKYDGRFKDIFQEVYE  WKQKFEE+ IW EH LIDDMVA
Sbjct: 286 ILKKYDGRFKDIFQEVYEANWKQKFEEHSIWYEHRLIDDMVA 327

[Close]

BLAST of CmoCh15G003610 vs. TAIR 10
Match: AT1G54340.1 (isocitrate dehydrogenase )

HSP 1 Score: 142.9 bits (359), Expect = 1.4e-34
Identity = 68/102 (66.67%), Postives = 77/102 (75.49%), Query Frame = 0


Query: 1   MVFVPENGETPRELEVYDFKGPGIGLTMYNVDESIQAFAESSMSLAFEKKWPLYLSTKNT 60
           +VF P       E EV++F G G+ L MYN DESI+AFAESSM  A++KKWPLYLSTKNT
Sbjct: 156 LVFEPSGSSQKTEFEVFNFTGGGVALAMYNTDESIRAFAESSMYTAYQKKWPLYLSTKNT 215

Query: 61  ILKKYDGRFKDIFQEVYEEKWKQKFEENLIWCEHWLIDDMVA 103
           ILK YDGRFKDIFQEVYE  W+ K+E   IW EH LIDDMVA
Sbjct: 216 ILKIYDGRFKDIFQEVYEANWRSKYEAAGIWYEHRLIDDMVA 257

[Close]

BLAST of CmoCh15G003610 vs. TAIR 10
Match: AT1G65930.1 (cytosolic NADP+-dependent isocitrate dehydrogenase )

HSP 1 Score: 137.5 bits (345), Expect = 6.0e-33
Identity = 68/103 (66.02%), Postives = 81/103 (78.64%), Query Frame = 0


Query: 1   MVFVPENGETPRELEVYDFKGP-GIGLTMYNVDESIQAFAESSMSLAFEKKWPLYLSTKN 60
           M F  ++G+T  E EV+ F G  G+ + MYN DESI+AFA++SM+ A+EKKWPLYLSTKN
Sbjct: 156 MTFEGKDGKT--ETEVFTFTGEGGVAMAMYNTDESIRAFADASMNTAYEKKWPLYLSTKN 215

Query: 61  TILKKYDGRFKDIFQEVYEEKWKQKFEENLIWCEHWLIDDMVA 103
           TILKKYDGRFKDIFQEVYE  WK K++   IW EH LIDDMVA
Sbjct: 216 TILKKYDGRFKDIFQEVYEASWKSKYDAAGIWYEHRLIDDMVA 256

The following BLAST results are available for this feature:

BLAST of CmoCh15G003610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LPJ5	1.6e-43	81.37	Isocitrate dehydrogenase [NADP], chloroplastic/mitochondrial OS=Arabidopsis thal...	[more]
P50217	1.9e-36	69.90	Isocitrate dehydrogenase [NADP] OS=Solanum tuberosum OX=4113 GN=ICDH-1 PE=2 SV=1	[more]
P50218	2.1e-35	67.96	Isocitrate dehydrogenase [NADP] OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
Q40345	1.8e-34	69.90	Isocitrate dehydrogenase [NADP], chloroplastic (Fragment) OS=Medicago sativa OX=...	[more]
Q06197	3.1e-34	69.90	Isocitrate dehydrogenase [NADP] OS=Glycine max OX=3847 GN=IDH1 PE=1 SV=2	[more]

BLAST of CmoCh15G003610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HH92	5.1e-48	95.10	Isocitrate dehydrogenase [NADP] OS=Cucurbita moschata OX=3662 GN=LOC111463463 PE...	[more]
A0A5A7T3K6	4.3e-47	93.14	Isocitrate dehydrogenase [NADP] OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3C8N1	4.3e-47	93.14	Isocitrate dehydrogenase [NADP] OS=Cucumis melo OX=3656 GN=LOC103498090 PE=3 SV=...	[more]
A0A0A0KP32	5.6e-47	93.14	Isocitrate dehydrogenase [NADP] OS=Cucumis sativus OX=3659 GN=Csa_5G523180 PE=3 ...	[more]
A0A6J1JP31	2.1e-46	92.16	Isocitrate dehydrogenase [NADP] OS=Cucurbita maxima OX=3661 GN=LOC111487611 PE=3...	[more]

BLAST of CmoCh15G003610 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7016201.1	6.6e-50	96.08	Isocitrate dehydrogenase [NADP], chloroplastic/mitochondrial, partial [Cucurbita...	[more]
KAG6602427.1	1.1e-47	95.10	Isocitrate dehydrogenase [NADP], chloroplastic/mitochondrial, partial [Cucurbita...	[more]
XP_022963180.1	1.1e-47	95.10	isocitrate dehydrogenase [NADP]-like [Cucurbita moschata]	[more]
XP_038890600.1	1.8e-47	93.14	isocitrate dehydrogenase [NADP] isoform X2 [Benincasa hispida]	[more]
XP_038890601.1	1.8e-47	93.14	isocitrate dehydrogenase [NADP], chloroplastic/mitochondrial isoform X3 [Beninca...	[more]

BLAST of CmoCh15G003610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G14590.1	1.2e-44	81.37	Isocitrate/isopropylmalate dehydrogenase family protein	[more]
AT1G54340.1	1.4e-34	66.67	isocitrate dehydrogenase	[more]
AT1G65930.1	6.0e-33	66.02	cytosolic NADP+-dependent isocitrate dehydrogenase	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.718.10	Isopropylmalate Dehydrogenase	coord: 1..102 e-value: 1.0E-32 score: 115.2
None	No IPR available	PANTHER	PTHR11822:SF5	ISOCITRATE DEHYDROGENASE [NADP], CHLOROPLASTIC/MITOCHONDRIAL	coord: 1..102
None	No IPR available	SUPERFAMILY	53659	Isocitrate/Isopropylmalate dehydrogenase-like	coord: 1..102
IPR024084	Isopropylmalate dehydrogenase-like domain	PFAM	PF00180	Iso_dh	coord: 23..101 e-value: 1.4E-13 score: 50.7
IPR004790	Isocitrate dehydrogenase NADP-dependent	PANTHER	PTHR11822	NADP-SPECIFIC ISOCITRATE DEHYDROGENASE	coord: 1..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh15G003610.1	CmoCh15G003610.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006102	isocitrate metabolic process
biological_process	GO:0006739	NADP metabolic process
biological_process	GO:0006099	tricarboxylic acid cycle
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0004450	isocitrate dehydrogenase (NADP+) activity
molecular_function	GO:0000287	magnesium ion binding
molecular_function	GO:0051287	NAD binding
molecular_function	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor