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CmoCh15G003580 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGTTTGATTCCAACTTCAAAGATGACCTTCCCCTCCTCTCCAGCTTCTTCTCCGACAAAGCGGAGTCGAAACCACCTCTCGACGACGACGACCGCAAGTTTTCCCGGATGGAATTAGGCAGCTCGCCATCATCATCCAAGGGTTTGTTCCATAGTTTACTCGATCATCATAATCATAATAACAATCACTTTCAATATCTTCATCAATACTTCCCCGTCGTCACCAGATCTGACTCGATCAATAATAGTAATAATTCTCATTACGATCTCGATCATCATCGCCGTCGTCTCGACGGGTCATTACAAAGCCTTCTTTCTGAGATGCCAACCCAATGTTTTGAACCAAAGTTTGAAGCTTTTAGCAATGAAGTCCCCAAAGATCACATCTTTGAAAGTGGGGCCAAGTTGATGCATGGGTTTGTGGGGTCAGGGGGTGTTTGGACGAATTTTCCCGGAAACTTTATGCCTCAATTTTCTCAGCCGCCAAACAGCCATTTAGGGTTGGGATTGACAGACACCATTATTGGGTATGATCACATCAAGAAGCGAAAAAGAATTCAGCTAAGAAGGGAAAACAAGCCTCCAAAGAAGCTTCCAAACATTATAAAGGGACAGTGGACTCCTCAAGAAGACAGGTAAAATCAAACGTTAATTCTTTGTGTTTTTTTTTTTTTTTTTTTTTTTGTTGAATGATTAAATCACAGCCGTTGAATTTGTGTGTGTTTTTCCAGATTATTGGTGCAATTAGTGGATGAATATGGCATAAAAAAATGGTCACAAATTGCAAAAATGCTGCAAGGAAGAGTAGGGAAGCAGTGTAGAGAGAGATGGCACAACCACCTCCGGCCAGACATTAGGGTTTTTTTTTCCTTCTCTCTCTTCTCTCTCTCTCTATACATATACATATACATATACATATACATACATACATACGATCTCGTGTGATATCCGTACATACGCATGCTCGTCATACATTACACGTATCTATTTGTACCGACATACCATACATTTTACATATATGTCAACATGGAATATATAGTATATCATTTAATTCACGAAATGAATGATTCGCTATCTCAACGCGTGTCGCACGTTGTATCGGAATATGACGTGACGTTTTGGTCTTTCTTCAAAGACGTATAATCTTTTTCGACACATTTTTTTTATAGAGAGTTAAACACTTTCCATGTCTACCATTTGTCTATACGTAGCTGACAACTCACGGTAAATATAATTCTTTTAGGGCATATAATAAAAGAAAATTCGCCTTCCATTCTAATTCAATGAAAATTAGCCTATGTTTTTGCTATTAATTTTCCTCCCAAAACTTTGCTTAATTTGGGCTATTTTTTATTTTTTTTTTGTAACAGTCATTTCAGACTATCTTTCATTAGTTAATTGTGTTGTAAATGAATGATCGATGTTAGCTTTTTGTGTTCAAATAGGTAACTCTCGATAACGGTTTCATTTTAGGCTTGAATTTTATTTTATTTTTTAGAATATTTTCTTTTAAAACTAATTCCTAAGAGAATTAATTATATTAATTATAGCTAAATTATGTTTATTTTATTATTATTATTATTATTATTATTTAATTATTAAATTTGGGATGTGGGTGCAGAAAGACACGTGGAGTGAAGAAGAAGACAGAATACTAATTGAAGCCCACAAAGACATCGGAAACAAATGGGCGGAGATTGCCCGGCGGCTGCCGGGACGGACTGAAAACACCATAAAAAACCACTGGAACGCCACAAAGCGCCGCCAAAACTCCAAGAAGCTCAAAGGGAGAGATATGGATTCCAATCCCAACGGCTCGATGCTTCAAAATTACATCAAATCCGTCACCGCAGGAGATCGCAAAATCTCCGATTCGCTGCCGCTGCTGGTGGACAGCCATAGCCCTGCGGCGGAGGAGGGCGGCGGTTTTTGCTTCGGGTTCGGGTACGGATCTGGGTCCGGGTCGGGCTCGGGGATGGAGTGTTTGAATCTGACGCAGAATGAAGAGATGAAATCAGAGATGGATCTGCTGGAGCTGATTTGTCAGGGGAATCTTTGATATTATCGTCTTTATACAATATATAATATAATTTTATAATAATTAGGGTTTAAACTGCAAAAAACTCTATTTTTTTTTTAAGTATTTCATTTCGAGTTTAATATTCGAAAAATGGTTCGCAGGATATGGATAATCTTTTTAATGTTTATATTTGTTGTTGGATAACATGGGAAATTAAAGTTCGTTTTAAAAATTATTTAATTTTTTTGTTTATAAAAATTAATATTTGATTTATTATAAATATTGAAATTTTTAGCTAAATTTTATAATTTAAAAACTATATTTTGAAATTACCATTTGTTTTATTTTTTAAAATTAAATTTATAAACAATACTTTTTCCTATTAATTTATTTGTTTTATTATCTACTTTTTATGAAAGGTTTGGAAAACTAAAAAGAATATAAAAATATTTTAATTTCTTTTTTAAAAAAGATAAAAAAATTCATTTACTACCAATATTTTCAAAACTCAAAAACCAAGACCAGTTTAAAAAATTATTTAACTTTTTTTGTTTTTTATTTAAAAAGAATGAAGTTTATAAATAATACTTTTGTCTATGGATTTTTTAATTCATTTTTTAAAAAAACTAATAAAAATATATATGATAATATCTTAAATAAAAAGTTAAAGATTGATAACAATATTTTAAAACAAAAGAAAAAAAAGTTGAGAGACGTTTTTTTTTTTTTAATCATTTAAGTTAAAATAAATGAGGGTGGTAACTGCCTAATAATATTAGTACCAGCTTTTTTTGGGGTCATATGTTCAAATTATTTAAATTATTATGGCTATAATATCGAATATTTGAATCTAAATAACCTTCCTTAAAAAAAAAAAAAAAAATGACAAAGCTTTATGCATATATACTTGAGGCCTTTTTTGACATTGTTTTTAGTATCACAAATGAAAGATATTAATTTCACTCCTTTATATTTAGAATTGAATTTGAAAAAACTAAAACTCTGAGATTAACATTTTTTCTATATATAATAATTTTAGCTAATTATTAATTGTTAAGAATTAATGGTTTTAATTTGGTAACCAAATTTGTCTTAACTACACATCATATATTTTCTTTCTTTGTTTTCTTTTTTTTAAATGAACCCTAAATGTAGGTTACATTTAGGGCATAATTTATGTTTGTTAATTATATTAATTTTAAAACTTAAAACGCTTGTAAACATGTTTTCTCTCTGTAATTGATAGAAGACTCAAATTTGGATGGTATTTCGTGCATCAATAGCATAAGAGTAGTTAATTGAGTATTTTTAATACATTAATTATAAATTACCTAAGTTTTAGTTTTGATGCTTAGGCAATTTTAAAAATGTTTAATAACTCTTTTTCATTTCAGTTTTGCGTTCATAACCTTCTCATATATAAAAAAAAAAAAAAATATATATATATATATATTATATAAATTTAGTTTTTTCATGGATATTTAAAAAGTCAAAGACATAAATTAAAAAATTTAATGGATACAATATACAATATTAGAAAAGAAAAATCACTGTTTATAGAAAGGATATTTTTAAGATGCTTTTACAAAATTCAAAATCACTGTTATGATTAGTTAAGAACACTAATTTGACCCTTCAAATGTCAATCAAAGGTTTTATCAGAAAAGAAAAAGGTTTCTTCTCCATTGACTTCATGAAAAAAGAAAAAAAAACGAAAAAAAAAGGAATCTTGACAACTTTTAAGATGAATACAATAGAACATGCAAAAAGAAGGGAGGAAAACTAACTTCAAAAATATATTAGAACATGAATTAAAATGAAACAAATTTCAAAATAGGACGTTCGGAAACTAAAATGAAACAAATTTCAAAGATCAAAATAGAGCTTTAGAAAATTCAAGATCAAAATAGCGAAGAAAATTTCGGCATACTAATTACTAAAAAGAAATCAGATTACAGTAAACCACGGACACTTATAATTAGATGCAAAGGAAGCACAGGTTCCTTCCAGTTATTTCAACAAGCAACTAAAAGGTCAACTCTGAAAGCATTTTTTTTAGGGTAG ATGGAGTTTGATTCCAACTTCAAAGATGACCTTCCCCTCCTCTCCAGCTTCTTCTCCGACAAAGCGGAGTCGAAACCACCTCTCGACGACGACGACCGCAAGTTTTCCCGGATGGAATTAGGCAGCTCGCCATCATCATCCAAGGGTTTGTTCCATAGTTTACTCGATCATCATAATCATAATAACAATCACTTTCAATATCTTCATCAATACTTCCCCGTCGTCACCAGATCTGACTCGATCAATAATAGTAATAATTCTCATTACGATCTCGATCATCATCGCCGTCGTCTCGACGGGTCATTACAAAGCCTTCTTTCTGAGATGCCAACCCAATGTTTTGAACCAAAGTTTGAAGCTTTTAGCAATGAAGTCCCCAAAGATCACATCTTTGAAAGTGGGGCCAAGTTGATGCATGGGTTTGTGGGGTCAGGGGGTGTTTGGACGAATTTTCCCGGAAACTTTATGCCTCAATTTTCTCAGCCGCCAAACAGCCATTTAGGGTTGGGATTGACAGACACCATTATTGGGTATGATCACATCAAGAAGCGAAAAAGAATTCAGCTAAGAAGGGAAAACAAGCCTCCAAAGAAGCTTCCAAACATTATAAAGGGACAGTGGACTCCTCAAGAAGACAGATTATTGGTGCAATTAGTGGATGAATATGGCATAAAAAAATGGTCACAAATTGCAAAAATGCTGCAAGGAAGAGTAGGGAAGCAGTGTAGAGAGAGATGGCACAACCACCTCCGGCCAGACATTAGGAAAGACACGTGGAGTGAAGAAGAAGACAGAATACTAATTGAAGCCCACAAAGACATCGGAAACAAATGGGCGGAGATTGCCCGGCGGCTGCCGGGACGGACTGAAAACACCATAAAAAACCACTGGAACGCCACAAAGCGCCGCCAAAACTCCAAGAAGCTCAAAGGGAGAGATATGGATTCCAATCCCAACGGCTCGATGCTTCAAAATTACATCAAATCCGTCACCGCAGGAGATCGCAAAATCTCCGATTCGCTGCCGCTGCTGGTGGACAGCCATAGCCCTGCGGCGGAGGAGGGCGGCGGTTTTTGCTTCGGGTTCGGGTACGGATCTGGGTCCGGGTCGGGCTCGGGGATGGAGTGTTTGAATCTGACGCAGAATGAAGAGATGAAATCAGAGATGGATCTGCTGGAGCTGATTTATTACAGTAAACCACGGACACTTATAATTAGATGCAAAGGAAGCACAGGTTCCTTCCAGTTATTTCAACAAGCAACTAAAAGGTCAACTCTGAAAGCATTTTTTTTAGGGTAG ATGGAGTTTGATTCCAACTTCAAAGATGACCTTCCCCTCCTCTCCAGCTTCTTCTCCGACAAAGCGGAGTCGAAACCACCTCTCGACGACGACGACCGCAAGTTTTCCCGGATGGAATTAGGCAGCTCGCCATCATCATCCAAGGGTTTGTTCCATAGTTTACTCGATCATCATAATCATAATAACAATCACTTTCAATATCTTCATCAATACTTCCCCGTCGTCACCAGATCTGACTCGATCAATAATAGTAATAATTCTCATTACGATCTCGATCATCATCGCCGTCGTCTCGACGGGTCATTACAAAGCCTTCTTTCTGAGATGCCAACCCAATGTTTTGAACCAAAGTTTGAAGCTTTTAGCAATGAAGTCCCCAAAGATCACATCTTTGAAAGTGGGGCCAAGTTGATGCATGGGTTTGTGGGGTCAGGGGGTGTTTGGACGAATTTTCCCGGAAACTTTATGCCTCAATTTTCTCAGCCGCCAAACAGCCATTTAGGGTTGGGATTGACAGACACCATTATTGGGTATGATCACATCAAGAAGCGAAAAAGAATTCAGCTAAGAAGGGAAAACAAGCCTCCAAAGAAGCTTCCAAACATTATAAAGGGACAGTGGACTCCTCAAGAAGACAGATTATTGGTGCAATTAGTGGATGAATATGGCATAAAAAAATGGTCACAAATTGCAAAAATGCTGCAAGGAAGAGTAGGGAAGCAGTGTAGAGAGAGATGGCACAACCACCTCCGGCCAGACATTAGGAAAGACACGTGGAGTGAAGAAGAAGACAGAATACTAATTGAAGCCCACAAAGACATCGGAAACAAATGGGCGGAGATTGCCCGGCGGCTGCCGGGACGGACTGAAAACACCATAAAAAACCACTGGAACGCCACAAAGCGCCGCCAAAACTCCAAGAAGCTCAAAGGGAGAGATATGGATTCCAATCCCAACGGCTCGATGCTTCAAAATTACATCAAATCCGTCACCGCAGGAGATCGCAAAATCTCCGATTCGCTGCCGCTGCTGGTGGACAGCCATAGCCCTGCGGCGGAGGAGGGCGGCGGTTTTTGCTTCGGGTTCGGGTACGGATCTGGGTCCGGGTCGGGCTCGGGGATGGAGTGTTTGAATCTGACGCAGAATGAAGAGATGAAATCAGAGATGGATCTGCTGGAGCTGATTTATTACAGTAAACCACGGACACTTATAATTAGATGCAAAGGAAGCACAGGTTCCTTCCAGTTATTTCAACAAGCAACTAAAAGGTCAACTCTGAAAGCATTTTTTTTAGGGTAG MEFDSNFKDDLPLLSSFFSDKAESKPPLDDDDRKFSRMELGSSPSSSKGLFHSLLDHHNHNNNHFQYLHQYFPVVTRSDSINNSNNSHYDLDHHRRRLDGSLQSLLSEMPTQCFEPKFEAFSNEVPKDHIFESGAKLMHGFVGSGGVWTNFPGNFMPQFSQPPNSHLGLGLTDTIIGYDHIKKRKRIQLRRENKPPKKLPNIIKGQWTPQEDRLLVQLVDEYGIKKWSQIAKMLQGRVGKQCRERWHNHLRPDIRKDTWSEEEDRILIEAHKDIGNKWAEIARRLPGRTENTIKNHWNATKRRQNSKKLKGRDMDSNPNGSMLQNYIKSVTAGDRKISDSLPLLVDSHSPAAEEGGGFCFGFGYGSGSGSGSGMECLNLTQNEEMKSEMDLLELIYYSKPRTLIIRCKGSTGSFQLFQQATKRSTLKAFFLG Homology
BLAST of CmoCh15G003580 vs. ExPASy Swiss-Prot
Match: Q9LVW4 (Transcription factor MYB118 OS=Arabidopsis thaliana OX=3702 GN=MYB118 PE=2 SV=1) HSP 1 Score: 230.7 bits (587), Expect = 3.1e-59 Identity = 117/154 (75.97%), Postives = 133/154 (86.36%), Query Frame = 0
BLAST of CmoCh15G003580 vs. ExPASy Swiss-Prot
Match: Q9S7L2 (Transcription factor MYB98 OS=Arabidopsis thaliana OX=3702 GN=MYB98 PE=2 SV=1) HSP 1 Score: 202.6 bits (514), Expect = 9.0e-51 Identity = 93/136 (68.38%), Postives = 116/136 (85.29%), Query Frame = 0
BLAST of CmoCh15G003580 vs. ExPASy Swiss-Prot
Match: Q9FIM4 (Transcription factor MYB119 OS=Arabidopsis thaliana OX=3702 GN=MYB119 PE=2 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 8.8e-46 Identity = 87/140 (62.14%), Postives = 113/140 (80.71%), Query Frame = 0
BLAST of CmoCh15G003580 vs. ExPASy Swiss-Prot
Match: Q1PDP9 (Transcription factor MYB115 OS=Arabidopsis thaliana OX=3702 GN=MYB115 PE=2 SV=1) HSP 1 Score: 185.7 bits (470), Expect = 1.1e-45 Identity = 89/141 (63.12%), Postives = 108/141 (76.60%), Query Frame = 0
BLAST of CmoCh15G003580 vs. ExPASy Swiss-Prot
Match: Q9FY60 (Transcription factor MYB64 OS=Arabidopsis thaliana OX=3702 GN=MYB64 PE=2 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 1.3e-44 Identity = 88/159 (55.35%), Postives = 118/159 (74.21%), Query Frame = 0
BLAST of CmoCh15G003580 vs. ExPASy TrEMBL
Match: A0A6J1FFZ3 (transcription factor MYB118-like OS=Cucurbita moschata OX=3662 GN=LOC111445358 PE=4 SV=1) HSP 1 Score: 806.6 bits (2082), Expect = 5.0e-230 Identity = 395/395 (100.00%), Postives = 395/395 (100.00%), Query Frame = 0
BLAST of CmoCh15G003580 vs. ExPASy TrEMBL
Match: A0A6J1JX07 (transcription factor MYB118-like OS=Cucurbita maxima OX=3661 GN=LOC111489101 PE=4 SV=1) HSP 1 Score: 767.7 bits (1981), Expect = 2.6e-218 Identity = 377/396 (95.20%), Postives = 385/396 (97.22%), Query Frame = 0
BLAST of CmoCh15G003580 vs. ExPASy TrEMBL
Match: A0A6J1JTV8 (transcription factor MYB118-like OS=Cucurbita maxima OX=3661 GN=LOC111487800 PE=4 SV=1) HSP 1 Score: 572.8 bits (1475), Expect = 1.2e-159 Identity = 309/432 (71.53%), Postives = 344/432 (79.63%), Query Frame = 0
BLAST of CmoCh15G003580 vs. ExPASy TrEMBL
Match: A0A6J1HHA2 (transcription factor MYB118-like OS=Cucurbita moschata OX=3662 GN=LOC111463472 PE=4 SV=1) HSP 1 Score: 570.9 bits (1470), Expect = 4.7e-159 Identity = 309/435 (71.03%), Postives = 341/435 (78.39%), Query Frame = 0
BLAST of CmoCh15G003580 vs. ExPASy TrEMBL
Match: A0A6J1BX46 (transcription factor MYB118-like OS=Momordica charantia OX=3673 GN=LOC111006456 PE=4 SV=1) HSP 1 Score: 485.3 bits (1248), Expect = 2.6e-133 Identity = 288/448 (64.29%), Postives = 324/448 (72.32%), Query Frame = 0
BLAST of CmoCh15G003580 vs. NCBI nr
Match: XP_022939461.1 (transcription factor MYB118-like [Cucurbita moschata]) HSP 1 Score: 806.6 bits (2082), Expect = 1.0e-229 Identity = 395/395 (100.00%), Postives = 395/395 (100.00%), Query Frame = 0
BLAST of CmoCh15G003580 vs. NCBI nr
Match: KAG7016199.1 (Transcription factor MYB-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 795.4 bits (2053), Expect = 2.4e-226 Identity = 392/396 (98.99%), Postives = 393/396 (99.24%), Query Frame = 0
BLAST of CmoCh15G003580 vs. NCBI nr
Match: XP_023551683.1 (transcription factor MYB118-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 775.0 bits (2000), Expect = 3.4e-220 Identity = 385/404 (95.30%), Postives = 390/404 (96.53%), Query Frame = 0
BLAST of CmoCh15G003580 vs. NCBI nr
Match: XP_022992905.1 (transcription factor MYB118-like [Cucurbita maxima]) HSP 1 Score: 767.7 bits (1981), Expect = 5.4e-218 Identity = 377/396 (95.20%), Postives = 385/396 (97.22%), Query Frame = 0
BLAST of CmoCh15G003580 vs. NCBI nr
Match: KAG6578660.1 (Transcription factor MYB118, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 741.1 bits (1912), Expect = 5.4e-210 Identity = 373/396 (94.19%), Postives = 374/396 (94.44%), Query Frame = 0
BLAST of CmoCh15G003580 vs. TAIR 10
Match: AT3G27785.1 (myb domain protein 118 ) HSP 1 Score: 230.7 bits (587), Expect = 2.2e-60 Identity = 117/154 (75.97%), Postives = 133/154 (86.36%), Query Frame = 0
BLAST of CmoCh15G003580 vs. TAIR 10
Match: AT4G18770.1 (myb domain protein 98 ) HSP 1 Score: 202.6 bits (514), Expect = 6.4e-52 Identity = 93/136 (68.38%), Postives = 116/136 (85.29%), Query Frame = 0
BLAST of CmoCh15G003580 vs. TAIR 10
Match: AT5G58850.1 (myb domain protein 119 ) HSP 1 Score: 186.0 bits (471), Expect = 6.2e-47 Identity = 87/140 (62.14%), Postives = 113/140 (80.71%), Query Frame = 0
BLAST of CmoCh15G003580 vs. TAIR 10
Match: AT5G40360.1 (myb domain protein 115 ) HSP 1 Score: 185.7 bits (470), Expect = 8.1e-47 Identity = 89/141 (63.12%), Postives = 108/141 (76.60%), Query Frame = 0
BLAST of CmoCh15G003580 vs. TAIR 10
Match: AT5G11050.1 (myb domain protein 64 ) HSP 1 Score: 182.2 bits (461), Expect = 9.0e-46 Identity = 88/159 (55.35%), Postives = 118/159 (74.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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