CmoCh15G003530 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTCGCACACATTTGTATGCTGAATCCAACATCACTCCCGATTACGATAATTAAATCTTTTTTTGTTTGTTTGTATTTTCATATATCGCACAGAATACAAGAAGATCGATCCCGAACTCAGAAACTCTTCCACAACGACCTCGCTTTTCCGGCAACCGCCAAGAAATCTCCAACGCTCCTCTCCTTTCCGGTCAGTTTTCCGATCGCCTTGTTTATTTAGGGTTTCGCGTCTTTTCTCAGATGCCTCTGTTTTCATCTTCAAATTAGTTTTAATGTTTGTTATTGAATTTCAAATGCAATTCAAATCATATATTATTATTATTATTACATTTGTAGTGTTTTCTTCTCAAATATAGAAATGCTGACTATATCCAATTAAAATCTTTCTATATATATATATATATATATATTTTTTTTTTTTTTGTTGGAAATCATAATTTTATTTTCAAATCGATATATTTCTTCAGTTTCTTGAAAATTAAACTCATTTAAAAAATAAAAAAGAATAATAATTTGTGTGGTTGGATATGGGAGCGTTTTCTTTTTCCAACATAGGAAATACTGGCCATCCAATTAATTTTTTCTTTAACGTTTTTTTTAAATAATTCATTTTCTTAATTTTCTCAGACAGAAAATACCAATTATTATAGAGTTATAGTTAACTATTCTTAACTAAAATAAATAAATAAATAAATAAAAAGGGTAAATTATTTTAATGAAAAATAAAGAAATAAAATAGGAGTAATTTGGGTGGGCTATCCCAGTCATGAAGTTGACCCATCATCCCACGTGTTATCTTATCCATTTAAAACTAATTATATTATTTGGTCATATTTTTTAACCTATTTTTGTGTGTATTTTTTACCCATTTATTTTACTTCCCAAAATAATGAAATAAAAGTGTTTTTTTTTAAGTAAAAATCCTATTTAATCAAAATCACTTTTTGCTGGAGAATGAAAATTGCAAGCTAATTTAAGAAATGATAGTAAGTTTATAATCAAAGAATACTCCCTCCACCTCCAATTGGTATGAGGTTTTTTTGGAAAATCAAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTAGACAATATCATATCATTGTAGAGAGTTTGTTGGAGGACAGGTATTGGAAGATGAAAGTCTTTATAACAAAGAATGAATGTAGAGCAAATTGTCATGAGAGCTGCTCAAAATTGACACTATCATGGTCTGCGTTCTTCTAGCACTCTTTACCTTAAAAAAAAAATTCTCATGCAAAATCCATGTAATGAACAAAAGAATATTAAATGAGAGAGAACAGTTTTTTTTTTTTTAAATTTTAATTTTTTTTTATTTTTAATTTCGTAGACTACATTCTAAGTGTTCATCTAAATTTCTTGCAGATTCTGATCAAGAAATCAGAAAAAGAGAATTCAAATATGGAAAAAGACTCATCTCGACCCACACGGCGGCAGAGATTCGCGGTGGACGACGGCGCCGATCTAATAGACTGCTCCGGCAAGCAATGCCAGTCGTGCACCACCGGCTTGGTTGCGGACTGCGTCGCCATCTGGTTATGCCCATGCTCGGTTGTCAGCTTCTTGGCTCTGGCTCTCGTCAAACTTCCGTGGATGATCGGGCGGCGGTGTCTGCAGCAGAGAAGGCAGAAGAGGAAATTGATTGGGCGGAGAGGAGAACGCGAGGGCGGTGGTGTGGCGGCGGAGAGTGGTGGGGGTGCGGCTAGTGAGGAGGGGCTGCCGCCGTGGTTCGGAGAGGAAGAAGCAGGGATGGGGAATTTGAGTGCGAGGTTTGAAGCAGAGAGAATTTGGGTGCAGTTGCATCAGGTGGGTCAGTTGGGGTTTGGAACTGTTTCCTTCACTGGGAATACAAATTTGTAAAAGGTTACAAATTATCTAAATTATTATTAATTTTGCATTAATTTAGCCTTTAAATTCACTAAATATGCTATCAATTTATAATAATCTAAACCTTATTATAAAAAATCTCATCAAAATTAAATGTTAATATATGTTTTTAATGAATTAAGTTTTGTAGTTTATAAACACATTTAATCCCATAATTAATTGATTAAATTCTATTAAATTTTGATATATTTTTTTGGTGTAGCAACTAAATGGTTAGGAAATTTTAAATAAAATAATAAAATTGTTTTGTTTTTGTTTTTTTTTTTTTTTTTTTTGTAGACAAGAAATAAGAACGGAATCCAGGCTACCATTGAGCATCGAGACTCGAGAGATAGAGATCGTATGAGGAAAGAGCTTCTTGCGAAGAATCGACTACAGAGACAACGATGGAGGATCAACCGACTCGAATAATGCTTGCAGTGAATCAGTCAACCATCAATGGCTATCCGCATGCATCCATAAGCTGTAGAAGGGCCTTCGAATGGACTCTCCAGAAGATCGTCCGCTCCAACACCTCTGGTTTCCACTTGCTCTTCCTCCATGTCCAAGTTCCTGACGAAGACGGTTCGTTCTCCGTCTCCTCTCGATTTCTTTACTTTCTTATTCTTTTCTTTATGGCCTCTTTTCCTAATGCTGATCGATTATGTGAAATGCGATGCTATTCTGTTGGTTGTTTACTGTTTTGCGGAATCTTGAGCTTCGTTGGATGAACTTCGACCTTTAATTTGATCATTTTTTGGTTGATTGGGAGCAGAGAAGGGAAGTGTTTCTTTGTAAGAAGGTGTTATTTCTGCTACCGCCCTGTCGTCTCGGCTGATCTTAAAATTTTGTAAATTAGTTGTAAATATATCCAGTGATTGCACCGATGATTGGTTTATATGATTTTCTTGTACACAATGGATTCTCTGTTTCAAAATTTCTTGAAGTTTCGAATCTATAAATAAGAAACGAGCTTACTCGGTCTTCCTCTTGATGTATTTTTTCTGTCCGATACAGATACGTGCAATATTTAGGTGTTATTCGTTTTTTCCTGGTAATTGATTCAACCATCTTTTTCATCAACATCTTTGGAGAAAGACTAATGCTATTTCATCTGTCCAATCGTCAAGGAACTTGTTAAATTCAAAACATCCAAATATGACCAAAACATTCACAAACCAAATGCAAAGCTCAAGCAAGCCCGTGCATAAAATTAGCAGAAGTGTGGTGTCTGATTATCTAACATAACATTGAATTTAGGATGACTCTTGAGAAAAAGTGTTTTTTAGGTTACTCCTAAAAGAGCTTATAGAACACATAAGAATTAAGTGTGTCTTGTTATATTACTTTTACCCTCTTCATGGATTTTTTAGATTCGTTGGCCATTTTTGAGGAAGACTATCTCCCATTTCACAAGATAATGGTTATTGGTTCCGTTAGTAGGTACTATACTATCGCTTGAGGAAGTGGATCAATTTTTTTTTTGCAGTATTAGTATAATGCTAGACTCATTAGATCACCTTGAATAGTTTGGCCTTCTGGACGACTCCTCCAATCTCTCCGATGCGTCCATTCTTTATCTTACATAATCACATTGAGAACTGATGTGTGGGATATTACAAAATGATGCTGATTCCATGTATCATATGCTAGAAAATAACTGCTAACCAAAACAGTACTCTGCTCATTTGATTTCTTGTAGGTTTTGATGGCTCAGATAGTATCTCTGCGTCCTCTGATGATTTTAAAGACCAGAACCCTAGGTACAATTCAAGAGGGCTTCAACTACTGGAATTCTTTGTCACGAGATGTCATGAACTTGGGGTAATGTAATCCATGTTTATACGATTTTTCATGGTGGAGTGATCTGTCAATATAAATATGCAAATTATACAGCCAGCTTTACATGATGTTCATATTCCACATAAATCAAATGTGAGATCCCACGTTGGTGGGAGAGGGGAACGAAACATTCTTTATAAGGGTGTGTAAACCTCCCTCTTGTAGATGCGTCTTAAAACCGTGAGGCTGACGGCGATACGTAAAGTGCCAAAGCAGACAATATCTGCTAGCAGTGGGTTTGAACTGTTACAAATGGTATTAGAGCTAAGCACCAAGGGGTGTGCCAGCGAGGAAGCTGTGCCTCGAAAGGGGTGGATTGTGAGATCCCACGTCAATTGGAGAGGAGAATAAAACATTATTTATAAAGGTGTGGAAACTTCTCCCTAGTAGATGTGTCTTAAAATCGTGAAGCCGACGACGTTACGTAATTGGCTAAAACGGACAATATCTACAAGTGGTGAGTTTGAGCTGTTACATTTGTGTTACAATCATTGTGTGGCAATTTTGTAGGTCACTTGCGAATCTTGGCTTAAGAAAGGCGATCCAACTGAAGTAATTTGCCTAGAGGCGAAACGCGTGCAACCTGATTTTCTAGTTCTGGGAAGCAGGGGGCTTGGCCCGTTCAAGAAGTATGCTCTAGTTTTATTAGCGCTTCTACATTAGTGATTCTAAAGTACAAACCACATTTGATCATTTCTTCCAATCTCCGGTCTTAGAGCCGTCCGGAGTCTGTGTTTACCATTGACCCTTTACGGAATTGGAAACCTAACTGCCTGAAAATTCCTCTTGTGGATGTCTGTAGGGTTTTTGTGGGCACTGTAAGTGAGTTCTGTGCAAAACATGCCGAGTGCCCTGTCATTACAATCAAACGCAGGGAGGACGAGACGCCCGAAGATCCCATCGATGACTGAGTTTTCAGCCAGTAAAACTCACGGCCTCTTTGATTTCCCTTCATCATGTTTATAAATAAGAAACTTTTGGTGAGCGTCTTGTGCATTTAGTGTGTAAAGGTTGCAAATTCGCCACTGATTTGCATTTGTGTTGTGATTTGTTCAAGCATACAGCCATTATTTTGTTCATTTGATTGATGACTCATTTGGGATTTGGTAACATCCTTTCCATGTGAGATATATAGTTAAAACCATTCTCTTTCTCTCTAGAAAACAGGAATTTTGTATGGAATTTCACAGAAATAGACGTTGAAATACAAGTTTATGTAATTTTACAGATCCAATGAAGGAAGAAGAAGAACAAGGGCAACAATTTGGTGAATAGAAGCAGAAAATAAGCATGGCTTCACAGTTCATATCAAGAAAAATGGAAAATCCGCAAGACTGAGTAAGTTTCTCTAA ATGCTTCGCACACATTTAATACAAGAAGATCGATCCCGAACTCAGAAACTCTTCCACAACGACCTCGCTTTTCCGGCAACCGCCAAGAAATCTCCAACGCTCCTCTCCTTTCCGATTCTGATCAAGAAATCAGAAAAAGAGAATTCAAATATGGAAAAAGACTCATCTCGACCCACACGGCGGCAGAGATTCGCGGTGGACGACGGCGCCGATCTAATAGACTGCTCCGGCAAGCAATGCCAGTCGTGCACCACCGGCTTGGTTGCGGACTGCGTCGCCATCTGGTTATGCCCATGCTCGGTTGTCAGCTTCTTGGCTCTGGCTCTCGTCAAACTTCCGTGGATGATCGGGCGGCGGTGTCTGCAGCAGAGAAGGCAGAAGAGGAAATTGATTGGGCGGAGAGGAGAACGCGAGGGCGGTGGTGTGGCGGCGGAGAGTGGTGGGGGTGCGGCTAGTGAGGAGGGGCTGCCGCCGTGGTTCGGAGAGGAAGAAGCAGGGATGGGGAATTTGAGTGCGAGGTTTGAAGCAGAGAGAATTTGGGTGCAGTTGCATCAGACAAGAAATAAGAACGGAATCCAGGCTACCATTGAGCATCGAGACTCGAGAGATAGAGATCTGAATCAGTCAACCATCAATGGCTATCCGCATGCATCCATAAGCTGTAGAAGGGCCTTCGAATGGACTCTCCAGAAGATCGTCCGCTCCAACACCTCTGGTTTCCACTTGCTCTTCCTCCATGTCCAAGTTCCTGACGAAGACGGTTTTGATGGCTCAGATAGTATCTCTGCGTCCTCTGATGATTTTAAAGACCAGAACCCTAGGTACAATTCAAGAGGGCTTCAACTACTGGAATTCTTTGTCACGAGATGTCATGAACTTGGGGTCACTTGCGAATCTTGGCTTAAGAAAGGCGATCCAACTGAAGTAATTTGCCTAGAGGCGAAACGCGTGCAACCTGATTTTCTAGTTCTGGGAAGCAGGGGGCTTGGCCCGTTCAAGAAGGTTTTTGTGGGCACTGTAAAAGCAGAAAATAAGCATGGCTTCACAGTTCATATCAAGAAAAATGGAAAATCCGCAAGACTGAGTAAGTTTCTCTAA ATGCTTCGCACACATTTAATACAAGAAGATCGATCCCGAACTCAGAAACTCTTCCACAACGACCTCGCTTTTCCGGCAACCGCCAAGAAATCTCCAACGCTCCTCTCCTTTCCGATTCTGATCAAGAAATCAGAAAAAGAGAATTCAAATATGGAAAAAGACTCATCTCGACCCACACGGCGGCAGAGATTCGCGGTGGACGACGGCGCCGATCTAATAGACTGCTCCGGCAAGCAATGCCAGTCGTGCACCACCGGCTTGGTTGCGGACTGCGTCGCCATCTGGTTATGCCCATGCTCGGTTGTCAGCTTCTTGGCTCTGGCTCTCGTCAAACTTCCGTGGATGATCGGGCGGCGGTGTCTGCAGCAGAGAAGGCAGAAGAGGAAATTGATTGGGCGGAGAGGAGAACGCGAGGGCGGTGGTGTGGCGGCGGAGAGTGGTGGGGGTGCGGCTAGTGAGGAGGGGCTGCCGCCGTGGTTCGGAGAGGAAGAAGCAGGGATGGGGAATTTGAGTGCGAGGTTTGAAGCAGAGAGAATTTGGGTGCAGTTGCATCAGACAAGAAATAAGAACGGAATCCAGGCTACCATTGAGCATCGAGACTCGAGAGATAGAGATCTGAATCAGTCAACCATCAATGGCTATCCGCATGCATCCATAAGCTGTAGAAGGGCCTTCGAATGGACTCTCCAGAAGATCGTCCGCTCCAACACCTCTGGTTTCCACTTGCTCTTCCTCCATGTCCAAGTTCCTGACGAAGACGGTTTTGATGGCTCAGATAGTATCTCTGCGTCCTCTGATGATTTTAAAGACCAGAACCCTAGGTACAATTCAAGAGGGCTTCAACTACTGGAATTCTTTGTCACGAGATGTCATGAACTTGGGGTCACTTGCGAATCTTGGCTTAAGAAAGGCGATCCAACTGAAGTAATTTGCCTAGAGGCGAAACGCGTGCAACCTGATTTTCTAGTTCTGGGAAGCAGGGGGCTTGGCCCGTTCAAGAAGGTTTTTGTGGGCACTGTAAAAGCAGAAAATAAGCATGGCTTCACAGTTCATATCAAGAAAAATGGAAAATCCGCAAGACTGAGTAAGTTTCTCTAA MLRTHLIQEDRSRTQKLFHNDLAFPATAKKSPTLLSFPILIKKSEKENSNMEKDSSRPTRRQRFAVDDGADLIDCSGKQCQSCTTGLVADCVAIWLCPCSVVSFLALALVKLPWMIGRRCLQQRRQKRKLIGRRGEREGGGVAAESGGGAASEEGLPPWFGEEEAGMGNLSARFEAERIWVQLHQTRNKNGIQATIEHRDSRDRDLNQSTINGYPHASISCRRAFEWTLQKIVRSNTSGFHLLFLHVQVPDEDGFDGSDSISASSDDFKDQNPRYNSRGLQLLEFFVTRCHELGVTCESWLKKGDPTEVICLEAKRVQPDFLVLGSRGLGPFKKVFVGTVKAENKHGFTVHIKKNGKSARLSKFL Homology
BLAST of CmoCh15G003530 vs. ExPASy Swiss-Prot
Match: Q8LGG8 (Universal stress protein A-like protein OS=Arabidopsis thaliana OX=3702 GN=At3g01520 PE=1 SV=2) HSP 1 Score: 201.4 bits (511), Expect = 1.7e-50 Identity = 93/137 (67.88%), Postives = 110/137 (80.29%), Query Frame = 0
BLAST of CmoCh15G003530 vs. ExPASy TrEMBL
Match: A0A6J1FI52 (uncharacterized protein LOC111445546 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445546 PE=4 SV=1) HSP 1 Score: 325.9 bits (834), Expect = 2.2e-85 Identity = 169/182 (92.86%), Postives = 170/182 (93.41%), Query Frame = 0
BLAST of CmoCh15G003530 vs. ExPASy TrEMBL
Match: A0A6J1K2Z6 (universal stress protein A-like protein OS=Cucurbita maxima OX=3661 GN=LOC111489596 PE=4 SV=1) HSP 1 Score: 284.3 bits (726), Expect = 7.4e-73 Identity = 134/135 (99.26%), Postives = 135/135 (100.00%), Query Frame = 0
BLAST of CmoCh15G003530 vs. ExPASy TrEMBL
Match: A0A6J1FNN1 (universal stress protein A-like protein isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111445546 PE=4 SV=1) HSP 1 Score: 284.3 bits (726), Expect = 7.4e-73 Identity = 134/135 (99.26%), Postives = 135/135 (100.00%), Query Frame = 0
BLAST of CmoCh15G003530 vs. ExPASy TrEMBL
Match: A0A7G2ELA3 ((thale cress) hypothetical protein OS=Arabidopsis thaliana OX=3702 GN=AT9943_LOCUS9818 PE=4 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 2.3e-58 Identity = 148/345 (42.90%), Postives = 189/345 (54.78%), Query Frame = 0
BLAST of CmoCh15G003530 vs. ExPASy TrEMBL
Match: A0A6J1JLH1 (universal stress protein A-like protein OS=Cucurbita maxima OX=3661 GN=LOC111486957 PE=4 SV=1) HSP 1 Score: 234.6 bits (597), Expect = 6.7e-58 Identity = 111/135 (82.22%), Postives = 118/135 (87.41%), Query Frame = 0
BLAST of CmoCh15G003530 vs. NCBI nr
Match: KAG6578655.1 (Universal stress protein A-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 574.7 bits (1480), Expect = 5.6e-160 Identity = 284/290 (97.93%), Postives = 285/290 (98.28%), Query Frame = 0
BLAST of CmoCh15G003530 vs. NCBI nr
Match: XP_022939759.1 (uncharacterized protein LOC111445546 isoform X1 [Cucurbita moschata]) HSP 1 Score: 325.9 bits (834), Expect = 4.6e-85 Identity = 169/182 (92.86%), Postives = 170/182 (93.41%), Query Frame = 0
BLAST of CmoCh15G003530 vs. NCBI nr
Match: XP_023551092.1 (uncharacterized protein LOC111809018 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 308.9 bits (790), Expect = 5.8e-80 Identity = 161/182 (88.46%), Postives = 166/182 (91.21%), Query Frame = 0
BLAST of CmoCh15G003530 vs. NCBI nr
Match: XP_022939760.1 (universal stress protein A-like protein isoform X2 [Cucurbita moschata] >XP_022939761.1 universal stress protein A-like protein isoform X2 [Cucurbita moschata] >XP_022993673.1 universal stress protein A-like protein [Cucurbita maxima] >XP_022993674.1 universal stress protein A-like protein [Cucurbita maxima] >XP_023551094.1 universal stress protein A-like protein isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 284.3 bits (726), Expect = 1.5e-72 Identity = 134/135 (99.26%), Postives = 135/135 (100.00%), Query Frame = 0
BLAST of CmoCh15G003530 vs. NCBI nr
Match: XP_010485410.1 (PREDICTED: uncharacterized protein LOC104763741 [Camelina sativa] >XP_010485411.1 PREDICTED: uncharacterized protein LOC104763741 [Camelina sativa]) HSP 1 Score: 255.4 bits (651), Expect = 7.6e-64 Identity = 155/337 (45.99%), Postives = 199/337 (59.05%), Query Frame = 0
BLAST of CmoCh15G003530 vs. TAIR 10
Match: AT5G14680.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 211.8 bits (538), Expect = 8.9e-55 Identity = 95/135 (70.37%), Postives = 115/135 (85.19%), Query Frame = 0
BLAST of CmoCh15G003530 vs. TAIR 10
Match: AT3G01520.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 201.4 bits (511), Expect = 1.2e-51 Identity = 93/137 (67.88%), Postives = 110/137 (80.29%), Query Frame = 0
BLAST of CmoCh15G003530 vs. TAIR 10
Match: AT5G14690.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01516.1); Has 86 Blast hits to 86 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 2; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 74.7 bits (182), Expect = 1.7e-13 Identity = 58/175 (33.14%), Postives = 80/175 (45.71%), Query Frame = 0
BLAST of CmoCh15G003530 vs. TAIR 10
Match: AT3G01516.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G14690.1); Has 67 Blast hits to 67 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 70.5 bits (171), Expect = 3.2e-12 Identity = 56/174 (32.18%), Postives = 80/174 (45.98%), Query Frame = 0
BLAST of CmoCh15G003530 vs. TAIR 10
Match: AT1G68300.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 56.2 bits (134), Expect = 6.3e-08 Identity = 36/119 (30.25%), Postives = 55/119 (46.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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