![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
CmoCh15G003510 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AACAAATGGTAGGTGGATTGACTTCGAAGTTGAAGAGTTGGTGAGCAAAGCAACTTGATTGACTTGACCCTAGTCAGGACACTTTGACTCTTCCTTCCCGCATGGAAAGCTCGGGTGGTACTCGCTTTCCGGTTTCCCACAAGCAGGCCTCATCGGAAATCAAGGTATGGATTACTTGCTCCGGATTAAATTAATCCATCCTCTTCAGTCCTTGAACGAATTCGGGATTTGGGTGTTGTGATTTTCCCTGTAGCAGCGTTGTTTTCTAGGGTTGATTTTAATTTAAAGGATTCGCGTTTGCACACAACCTGTTTGCTTAAATGCCGCAGCTAGTTTTATTAGCTTTAATAGACTGGTGATTCGTCTGCGAGTTGCTGATGGGGAAGCTTGAATTTGGATGATACGGAAACAAATTTAAATTGGGGTTAAGTGATTTGAGTTAGGAATTCGAGTTAGGGATATGCAGGATGTTTACCGAAATTAAATTGCTTCTTCCTGCTTGTATTAATCATTTGAATATAATGCTTGATTCAAATCCTCCTTGCGGCTTATTGTTTTTCATCGATAGTTACTTGATTTTGATGAACATATTCAGGATTCTACACCTGTCATTGTATATTTTTTGAACATCTGTGGATTTCATTGCCTATGTTCTAGTTCAAATTCAGGGCACTTTACTATTCATCATTGGTTAGCTCAGGGAGTTAGTAATCTCATTCATATGTCTTCTGCTTTCAGGGAATCAAAACGGATATAGTCGTTTGTCGCCACGACGATCATTTTCTTGTCAGTAGGAGTTCGGTTTTATATTATTACAAGTGCATATGTTTTTGTTGGAGGAGGATGGGGAAATGGGGATTTTGGTATCTATTAGTGTGTGTTCTTTACATCTCTGATGTTTGAAACTGATTTGAAGGTTATTGCAACTCAAATTGGAGCAATGGGGACTATGCTGCAAGCGAGGTGAGCAATTACTGGTCATTTCTGCAAAATTTAGCGATTCTATGCCATCAAATAGACATATTTGTAATCAAACTGACATCACTTAAGTTCACAACCATTACACTTCGTAGACTTTTCTTTGGACGAGTAACACTTCATAGATTTCAGCTTAAATATTGCTGAAATCTTTTGAAAGGTCAAAAAATTAACTTCCCAAGTTATTGGAACTAATGATTTATGCTTATTTTGTTATGCTATATTAGAAGCTTCTTATACATCTATATGTTACAATCCGCAGGAAGGAGGAGGGGATGGCAATTCATTCAACCTTCTCAGTGTCTACCGTTTTTGGCAAAAGAGATGAGGTAAGTCAGCTACGTTATAGTAGTTTGTTACTGAATAATGCTGCGATTGATACATGGAATTTTCAGCCGATGCTGGTCGCATGTGCACGTCAGTTGATCGAACAAATCAGGTAAACCTTCCAATTCAACATCATCGAACTTTATGGTTTGAACACTTCTACTCCTTTTGAAGATCTGACTTCTGGGCATGTGTGCATGTGCTCGTTGGAAATCTGCGGATAATGTATACAATAACCGAAACGTGCTATATTTCTATTAAGTAGATAACCTGTCTTAATGTTTGGGATCTTGACTTGTCAGACTCTGATTTATGGAAATGCTACATTCCTTATTTGGTGTCTTTTAGCTTTGCTGGGTGTCCTACTAGAGACGCTTCTTAAAGCTTCTTTAACATGGCTTAATGCTTAATGAGAGATCCAACTATAGAGCTTAAAACTTGTCATATTATAAGGAATGCTTTCTTTGTTCGCTTCTCCACTCCAACTGGTGTGAGATCTCACAATAGCCCAAAGAAGACAATATCTGCTAGCGGTAGGCTTGGGCTATTACAAATGGTATCAGAGCTAGACACCAAGCGGAGTGCCAGCGAGGACGCTAGGACCCTAAGGGGGGGTGGATTGTGAGATCCTACATTGGTTGGAGAGGGGAACGAAACATTCCTTATAAAAGTGTAGAAACCTCTCCTAACCTTAAGGGGAAGCTTCAAAGTGAAAGTTTAAAGAGGACAATATCTGCTAGCAGAGGGCTTAGGCTGTTACAAGAAGAGAGGATGACTTTCATCTCCTTCAACCCATTGTTTATTTCTGAAGCCTCAATATATACGGTCCAAAGTTAAGGTCCTTAACCTTTTTGAGTGGTAACTGTGACTAAGTAGATGGGTAGAATTTTGTGGTGATGCTTGGCAATTCCACTTTCTCTGGGAGGGAGAACTTTATGGCAATTCAAGGGCTTTTCACTACTACTTTAAGACATTTACTTGATGTAGACCCACTTGTAGAATTCTTAGAATACATTTATTGATGTGTTGAATATTGAAGCATATAACTTTTTACGTCCCATCAAGATAGCCATATTCAAATAACATGCTGAAATTATTCTTTTGTTTATGCAGTTTATCAGGTTCATACAAGCCATTATTAATCTCTCTTGGCCTAAAAGACCATTCTGTGGTAATTACTCAAATATGTTATTTTTCCAGACTTGGTAAAATGAATAAGTTTAATTGGATTCTTCCTGTTTTGCAGGAGACAATGAGAGGCATTGTTACTGCCGTGTCTGAGAATAAACTTTGGTAATATTTGACTTTTGCTGCTTAAACCCTCGTTTTGTTCACATTCAGTAAGATACATATTTATATTCCTACTTCTGTGACCTTTTTTGGTGGGGTTTTGACGATTTTATTGGCAAATGACCTCTCGATTGTCTGATCAATAAGATAGTAGACACGAAAATGAGATTTCAATAGTAGATTGTGTGAATTAGCTCTATTTTTTTTTAGTTAACGATATATTAGTGAAGGTTCAAACATCTAACTTTAAGAATAGATGTAATAGCTTATCCTGTTTGTTGGAGAATGATACGTGGTTCACGGCATTCAAACATCTAACTTTAAGAAT AACAAATGGTAGGTGGATTGACTTCGAAGTTGAAGAGTTGGTGAGCAAAGCAACTTGATTGACTTGACCCTAGTCAGGACACTTTGACTCTTCCTTCCCGCATGGAAAGCTCGGGTGGTACTCGCTTTCCGGTTTCCCACAAGCAGGCCTCATCGGAAATCAAGGTTATTGCAACTCAAATTGGAGCAATGGGGACTATGCTGCAAGCGAGGAAGGAGGAGGGGATGGCAATTCATTCAACCTTCTCAGTGTCTACCGTTTTTGGCAAAAGAGATGAGGTAAGTCAGCTACGTTATAGTAGTTTGTTACTGAATAATGCTGCGATTGATACATGGAATTTTCAGCCGATGCTGGTCGCATGTGCACGTCAGTTGATCGAACAAATCAGTTTATCAGGTTCATACAAGCCATTATTAATCTCTCTTGGCCTAAAAGACCATTCTGTGGAGACAATGAGAGGCATTGTTACTGCCGTGTCTGAGAATAAACTTTGGTAATATTTGACTTTTGCTGCTTAAACCCTCGTTTTGTTCACATTCAGTAAGATACATATTTATATTCCTACTTCTGTGACCTTTTTTGGTGGGGTTTTGACGATTTTATTGGCAAATGACCTCTCGATTGTCTGATCAATAAGATAGTAGACACGAAAATGAGATTTCAATAGTAGATTGTGTGAATTAGCTCTATTTTTTTTTAGTTAACGATATATTAGTGAAGGTTCAAACATCTAACTTTAAGAATAGATGTAATAGCTTATCCTGTTTGTTGGAGAATGATACGTGGTTCACGGCATTCAAACATCTAACTTTAAGAAT ATGGAAAGCTCGGGTGGTACTCGCTTTCCGGTTTCCCACAAGCAGGCCTCATCGGAAATCAAGGTTATTGCAACTCAAATTGGAGCAATGGGGACTATGCTGCAAGCGAGGAAGGAGGAGGGGATGGCAATTCATTCAACCTTCTCAGTGTCTACCGTTTTTGGCAAAAGAGATGAGGTAAGTCAGCTACGTTATAGTAGTTTGTTACTGAATAATGCTGCGATTGATACATGGAATTTTCAGCCGATGCTGGTCGCATGTGCACGTCAGTTGATCGAACAAATCAGTTTATCAGGTTCATACAAGCCATTATTAATCTCTCTTGGCCTAAAAGACCATTCTGTGGAGACAATGAGAGGCATTGTTACTGCCGTGTCTGAGAATAAACTTTGGTAA MESSGGTRFPVSHKQASSEIKVIATQIGAMGTMLQARKEEGMAIHSTFSVSTVFGKRDEVSQLRYSSLLLNNAAIDTWNFQPMLVACARQLIEQISLSGSYKPLLISLGLKDHSVETMRGIVTAVSENKLW Homology
BLAST of CmoCh15G003510 vs. ExPASy TrEMBL
Match: A0A6J1FFU1 (uncharacterized protein LOC111445047 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445047 PE=4 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 8.9e-45 Identity = 109/147 (74.15%), Postives = 109/147 (74.15%), Query Frame = 0
BLAST of CmoCh15G003510 vs. ExPASy TrEMBL
Match: A0A6J1JTJ3 (uncharacterized protein LOC111489603 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489603 PE=4 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 4.4e-44 Identity = 108/147 (73.47%), Postives = 108/147 (73.47%), Query Frame = 0
BLAST of CmoCh15G003510 vs. ExPASy TrEMBL
Match: A0A5A7TMV9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002440 PE=4 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 4.4e-44 Identity = 92/102 (90.20%), Postives = 98/102 (96.08%), Query Frame = 0
BLAST of CmoCh15G003510 vs. ExPASy TrEMBL
Match: A0A6J1FLG3 (uncharacterized protein LOC111445047 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111445047 PE=4 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 1.7e-43 Identity = 108/146 (73.97%), Postives = 108/146 (73.97%), Query Frame = 0
BLAST of CmoCh15G003510 vs. ExPASy TrEMBL
Match: A0A6J1K306 (uncharacterized protein LOC111489603 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111489603 PE=4 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 8.3e-43 Identity = 107/146 (73.29%), Postives = 107/146 (73.29%), Query Frame = 0
BLAST of CmoCh15G003510 vs. NCBI nr
Match: KAG7016194.1 (hypothetical protein SDJN02_21299 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 243.4 bits (620), Expect = 1.1e-60 Identity = 131/152 (86.18%), Postives = 131/152 (86.18%), Query Frame = 0
BLAST of CmoCh15G003510 vs. NCBI nr
Match: XP_022939014.1 (uncharacterized protein LOC111445047 isoform X1 [Cucurbita moschata] >KAG6578653.1 Proteasome assembly chaperone 3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 189.5 bits (480), Expect = 1.8e-44 Identity = 109/147 (74.15%), Postives = 109/147 (74.15%), Query Frame = 0
BLAST of CmoCh15G003510 vs. NCBI nr
Match: XP_022993682.1 (uncharacterized protein LOC111489603 isoform X1 [Cucurbita maxima] >XP_023551096.1 uncharacterized protein LOC111809020 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 187.2 bits (474), Expect = 9.1e-44 Identity = 108/147 (73.47%), Postives = 108/147 (73.47%), Query Frame = 0
BLAST of CmoCh15G003510 vs. NCBI nr
Match: KAA0042745.1 (uncharacterized protein E6C27_scaffold44G002440 [Cucumis melo var. makuwa]) HSP 1 Score: 187.2 bits (474), Expect = 9.1e-44 Identity = 92/102 (90.20%), Postives = 98/102 (96.08%), Query Frame = 0
BLAST of CmoCh15G003510 vs. NCBI nr
Match: XP_022939015.1 (uncharacterized protein LOC111445047 isoform X2 [Cucurbita moschata] >XP_022939016.1 uncharacterized protein LOC111445047 isoform X3 [Cucurbita moschata]) HSP 1 Score: 185.3 bits (469), Expect = 3.5e-43 Identity = 108/146 (73.97%), Postives = 108/146 (73.97%), Query Frame = 0
BLAST of CmoCh15G003510 vs. TAIR 10
Match: AT5G14710.1 (CONTAINS InterPro DOMAIN/s: Proteasome assembly chaperone 3 (InterPro:IPR018788); Has 120 Blast hits to 120 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 62; Fungi - 2; Plants - 49; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). ) HSP 1 Score: 113.6 bits (283), Expect = 1.2e-25 Identity = 68/141 (48.23%), Postives = 81/141 (57.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|