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CmoCh15G003210 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTGCCAGCGTCGGCGATGACACGGCCGATGCTAACCAAAACCATGAAGGTTTGGAAGACACCTTTAGCAGTGGTTTCGCCTTGGGATATTAACTTGCTGCCGTACCAGAAGTTCAAAGCCCATGTACAAATGGTGAGGCTTTGGGAGCAGCCGAGTCCAATTCCGGCATACCACGATTGCTTAATGCCTTGTCGGGTTGGGCCTTCTTGCGCCTTCTCGAGCATTTTAAGGATGCGGTCTTGTGAAGAGAAGGCCGTGACGGTTCGGAGGTTGGAGACAGCCTCTGCGGCGAGCTTACTGCACTGTTCTTGGGATTTGGTGGCGTTTTTGGACATCTTCCGTAGGAGTACTTGTCTTGTGTAGTAGCAGCTAATTACTGCTGGTTGGGCTGCGATTACTACAAGCGCCAGCCTCCATGAAATTATAAGCCCCATTGTGAATGCTACTATTACTGCTGAAATGGTTTGCATAATTAGAGCCATTCTATCGCCCACTAAGGATCGAACCTGCCCAAAAAGGAGCTCCCGGTCATACTTCAATACAAATTCATTGTAA ATGCTGCCAGCGTCGGCGATGACACGGCCGATGCTAACCAAAACCATGAAGGTTTGGAAGACACCTTTAGCAGTGGTTTCGCCTTGGGATATTAACTTGCTGCCGTACCAGAAGTTCAAAGCCCATGTACAAATGGTGAGGCTTTGGGAGCAGCCGAGTCCAATTCCGGCATACCACGATTGCTTAATGCCTTGTCGGGTTGGGCCTTCTTGCGCCTTCTCGAGCATTTTAAGGATGCGGTCTTGTGAAGAGAAGGCCGTGACGGTTCGGAGGTTGGAGACAGCCTCTGCGGCGAGCTTACTGCACTGTTCTTGGGATTTGGTGGCGTTTTTGGACATCTTCCGTAGGAGTACTTGTCTTCTAATTACTGCTGGTTGGGCTGCGATTACTACAAGCGCCAGCCTCCATGAAATTATAAGCCCCATTGTGAATGCTACTATTACTGCTGAAATGGTTTGCATAATTAGAGCCATTCTATCGCCCACTAAGGATCGAACCTGCCCAAAAAGGAGCTCCCGGTCATACTTCAATACAAATTCATTGTAA ATGCTGCCAGCGTCGGCGATGACACGGCCGATGCTAACCAAAACCATGAAGGTTTGGAAGACACCTTTAGCAGTGGTTTCGCCTTGGGATATTAACTTGCTGCCGTACCAGAAGTTCAAAGCCCATGTACAAATGGTGAGGCTTTGGGAGCAGCCGAGTCCAATTCCGGCATACCACGATTGCTTAATGCCTTGTCGGGTTGGGCCTTCTTGCGCCTTCTCGAGCATTTTAAGGATGCGGTCTTGTGAAGAGAAGGCCGTGACGGTTCGGAGGTTGGAGACAGCCTCTGCGGCGAGCTTACTGCACTGTTCTTGGGATTTGGTGGCGTTTTTGGACATCTTCCGTAGGAGTACTTGTCTTCTAATTACTGCTGGTTGGGCTGCGATTACTACAAGCGCCAGCCTCCATGAAATTATAAGCCCCATTGTGAATGCTACTATTACTGCTGAAATGGTTTGCATAATTAGAGCCATTCTATCGCCCACTAAGGATCGAACCTGCCCAAAAAGGAGCTCCCGGTCATACTTCAATACAAATTCATTGTAA MLPASAMTRPMLTKTMKVWKTPLAVVSPWDINLLPYQKFKAHVQMVRLWEQPSPIPAYHDCLMPCRVGPSCAFSSILRMRSCEEKAVTVRRLETASAASLLHCSWDLVAFLDIFRRSTCLLITAGWAAITTSASLHEIISPIVNATITAEMVCIIRAILSPTKDRTCPKRSSRSYFNTNSL Homology
BLAST of CmoCh15G003210 vs. ExPASy TrEMBL
Match: A0A0E0G342 (Uncharacterized protein OS=Oryza nivara OX=4536 PE=4 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 1.8e-24 Identity = 68/118 (57.63%), Postives = 83/118 (70.34%), Query Frame = 0
BLAST of CmoCh15G003210 vs. ExPASy TrEMBL
Match: A0A0A9HK05 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 9.1e-16 Identity = 49/88 (55.68%), Postives = 60/88 (68.18%), Query Frame = 0
BLAST of CmoCh15G003210 vs. ExPASy TrEMBL
Match: A0A218WFM0 (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr005792 PE=4 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 1.7e-09 Identity = 38/64 (59.38%), Postives = 45/64 (70.31%), Query Frame = 0
BLAST of CmoCh15G003210 vs. ExPASy TrEMBL
Match: A0A341RWW3 (Uncharacterized protein OS=Triticum aestivum OX=4565 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 2.3e-06 Identity = 37/74 (50.00%), Postives = 44/74 (59.46%), Query Frame = 0
BLAST of CmoCh15G003210 vs. ExPASy TrEMBL
Match: A0A0D3ETI3 (TF-B3 domain-containing protein OS=Oryza barthii OX=65489 PE=4 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 1.9e-05 Identity = 35/74 (47.30%), Postives = 42/74 (56.76%), Query Frame = 0
BLAST of CmoCh15G003210 vs. NCBI nr
Match: OWM71605.1 (hypothetical protein CDL15_Pgr005792 [Punica granatum]) HSP 1 Score: 72.8 bits (177), Expect = 3.4e-09 Identity = 38/64 (59.38%), Postives = 45/64 (70.31%), Query Frame = 0
BLAST of CmoCh15G003210 vs. NCBI nr
Match: KAG5616499.1 (hypothetical protein H5410_016323 [Solanum commersonii]) HSP 1 Score: 64.7 bits (156), Expect = 9.4e-07 Identity = 41/89 (46.07%), Postives = 48/89 (53.93%), Query Frame = 0
BLAST of CmoCh15G003210 vs. NCBI nr
Match: KAF7023659.1 (hypothetical protein CFC21_036134 [Triticum aestivum] >KAF7030625.1 hypothetical protein CFC21_042132 [Triticum aestivum] >KAF7066785.1 hypothetical protein CFC21_072722 [Triticum aestivum]) HSP 1 Score: 62.4 bits (150), Expect = 4.7e-06 Identity = 37/74 (50.00%), Postives = 44/74 (59.46%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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