CmoCh15G003080 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTACTGGAACCAATTTCTTATGGTATAGTTCATTTGAATGTATAAGCTTCTATAATTTATGATTTCAAAACTACCCAATCATTGATTACATTAGTCTTGTCTAGGTAATGATAGACCATTTGATTACATTAGTGTTACCCCACCGTACATACAAGTTGATTATGGGGTAGTCATGGAGCAACTATCAAAGTCAGCCTTAGTTGGAGAAGATACCTTCATCGTAAGTTGTATTTTCTTGTTCCTATTTAAGATATTTATTTACATATGGTTTACCTTCCTTTCTCTCACAAATCTTTGTGATAGGTTGTTGAATATCCATTGAAGACTGACATGCTGGATTCGTGTGGATGCCTTATTCAGGTAATTTAATCGTGCAGGTATTAACATTCTTAATGTTATGAATGAATAAAATCGTTAAATAGGATAAAATTGTATTTCAGCTGAAATCTGTTCACATAAATATAAAATATCTCTAGCCTGAGGGTAAGTGAGAAACTATGGGTATGGATCCTGGGAGATTATATTGTTTGTGATTGGGTGTCAAGTACAGTCTGTAACCAACGCCAAGGGTAATTTCTCAACAAGACACTTGAAAAGTATATATACAAGAACAGATCAAGGGTACGATATCTTACAAATTTCTGCTGTTGCTTTCGCTGTATTTTATGATGTCTGGACATGGGATCTGCATTTGATGAGAATTATTTAGGTTTTTACTCTTAATGTCTTTCTCTTTTGAGTTACAAATATAATTGTATCTAATTGCAGATTACTAAGCGACGGTTTGGTCGGACAGTCTTGGCGATTTATGGACCCAAGTGGGCTGAGAAGGAAAAAAGAAAAAAATAA ATGGTACTGGAACCAATTTCTTATGGTAATGATAGACCATTTGATTACATTAGTGTTACCCCACCGTACATACAAGTTGATTATGGGGTAGTCATGGAGCAACTATCAAAGTCAGCCTTAGTTGGAGAAGATACCTTCATCGTTGTTGAATATCCATTGAAGACTGACATGCTGGATTCGTGTGGATGCCTTATTCAGATTACTAAGCGACGGTTTGGTCGGACAGTCTTGGCGATTTATGGACCCAAGTGGGCTGAGAAGGAAAAAAGAAAAAAATAA ATGGTACTGGAACCAATTTCTTATGGTAATGATAGACCATTTGATTACATTAGTGTTACCCCACCGTACATACAAGTTGATTATGGGGTAGTCATGGAGCAACTATCAAAGTCAGCCTTAGTTGGAGAAGATACCTTCATCGTTGTTGAATATCCATTGAAGACTGACATGCTGGATTCGTGTGGATGCCTTATTCAGATTACTAAGCGACGGTTTGGTCGGACAGTCTTGGCGATTTATGGACCCAAGTGGGCTGAGAAGGAAAAAAGAAAAAAATAA MVLEPISYGNDRPFDYISVTPPYIQVDYGVVMEQLSKSALVGEDTFIVVEYPLKTDMLDSCGCLIQITKRRFGRTVLAIYGPKWAEKEKRKK Homology
BLAST of CmoCh15G003080 vs. ExPASy TrEMBL
Match: A0A6J1K2L1 (uncharacterized protein LOC111489523 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489523 PE=4 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 1.2e-40 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0
BLAST of CmoCh15G003080 vs. ExPASy TrEMBL
Match: A0A6J1K2L6 (putative rRNA methyltransferase YlbH isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111489523 PE=4 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 1.2e-40 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0
BLAST of CmoCh15G003080 vs. ExPASy TrEMBL
Match: A0A6J1JYU7 (uncharacterized protein LOC111489523 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111489523 PE=4 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 1.2e-40 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0
BLAST of CmoCh15G003080 vs. ExPASy TrEMBL
Match: A0A6J1JWM9 (uncharacterized protein LOC111489523 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111489523 PE=4 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 1.2e-40 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0
BLAST of CmoCh15G003080 vs. ExPASy TrEMBL
Match: A0A6J1FJ81 (uncharacterized protein LOC111444763 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444763 PE=4 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 1.2e-40 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0
BLAST of CmoCh15G003080 vs. NCBI nr
Match: XP_023549922.1 (uncharacterized protein LOC111808272 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 175.3 bits (443), Expect = 2.5e-40 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0
BLAST of CmoCh15G003080 vs. NCBI nr
Match: XP_022993553.1 (uncharacterized protein LOC111489523 isoform X1 [Cucurbita maxima] >XP_022993554.1 uncharacterized protein LOC111489523 isoform X1 [Cucurbita maxima]) HSP 1 Score: 175.3 bits (443), Expect = 2.5e-40 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0
BLAST of CmoCh15G003080 vs. NCBI nr
Match: XP_022993555.1 (uncharacterized protein LOC111489523 isoform X2 [Cucurbita maxima]) HSP 1 Score: 175.3 bits (443), Expect = 2.5e-40 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0
BLAST of CmoCh15G003080 vs. NCBI nr
Match: XP_022993558.1 (putative rRNA methyltransferase YlbH isoform X4 [Cucurbita maxima]) HSP 1 Score: 175.3 bits (443), Expect = 2.5e-40 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0
BLAST of CmoCh15G003080 vs. NCBI nr
Match: XP_023549923.1 (uncharacterized protein LOC111808272 isoform X3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 175.3 bits (443), Expect = 2.5e-40 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0
BLAST of CmoCh15G003080 vs. TAIR 10
Match: AT3G28460.1 (methyltransferases ) HSP 1 Score: 124.4 bits (311), Expect = 4.7e-29 Identity = 55/82 (67.07%), Postives = 70/82 (85.37%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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