CmoCh15G002870 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGAAAGCGTCAAGTGGTGCTCAGAAGATCAGAAGAACCCTCGAGAGACACTGAGGCTTCCTCTTTCACAGTAAGGAGTGTTAGATATGGGGAGTGCCAAAAGAACCACGCTGCGAGTGTCGGAGGGTACGCCGTCGATGGGTGTCGAGAATTCATGGCAAGCGGCGATGAAGGTACGACTTCTGCACTGACTTGCGCTGCCTGCGGTTGCCACCGGAGTTTCCATAGAAGGCAAGTTGGAACGGAGGTAGTCAGTGATTGCTCGTCGTCTCCCTCAAACGAAACTTAA ATGAGAAAGCGTCAAGTGGTGCTCAGAAGATCAGAAGAACCCTCGAGAGACACTGAGGCTTCCTCTTTCACAGTAAGGAGTGTTAGATATGGGGAGTGCCAAAAGAACCACGCTGCGAGTGTCGGAGGGTACGCCGTCGATGGGTGTCGAGAATTCATGGCAAGCGGCGATGAAGGTACGACTTCTGCACTGACTTGCGCTGCCTGCGGTTGCCACCGGAGTTTCCATAGAAGGCAAGTTGGAACGGAGGTAGTCAGTGATTGCTCGTCGTCTCCCTCAAACGAAACTTAA ATGAGAAAGCGTCAAGTGGTGCTCAGAAGATCAGAAGAACCCTCGAGAGACACTGAGGCTTCCTCTTTCACAGTAAGGAGTGTTAGATATGGGGAGTGCCAAAAGAACCACGCTGCGAGTGTCGGAGGGTACGCCGTCGATGGGTGTCGAGAATTCATGGCAAGCGGCGATGAAGGTACGACTTCTGCACTGACTTGCGCTGCCTGCGGTTGCCACCGGAGTTTCCATAGAAGGCAAGTTGGAACGGAGGTAGTCAGTGATTGCTCGTCGTCTCCCTCAAACGAAACTTAA MRKRQVVLRRSEEPSRDTEASSFTVRSVRYGECQKNHAASVGGYAVDGCREFMASGDEGTTSALTCAACGCHRSFHRRQVGTEVVSDCSSSPSNET Homology
BLAST of CmoCh15G002870 vs. ExPASy Swiss-Prot
Match: Q9LJW5 (Mini zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=MIF2 PE=1 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 5.9e-35 Identity = 77/97 (79.38%), Postives = 86/97 (88.66%), Query Frame = 0
BLAST of CmoCh15G002870 vs. ExPASy Swiss-Prot
Match: Q9CA51 (Mini zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=MIF1 PE=1 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 1.2e-24 Identity = 58/102 (56.86%), Postives = 73/102 (71.57%), Query Frame = 0
BLAST of CmoCh15G002870 vs. ExPASy Swiss-Prot
Match: Q2Q493 (Mini zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=MIF3 PE=1 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 1.8e-23 Identity = 59/94 (62.77%), Postives = 71/94 (75.53%), Query Frame = 0
BLAST of CmoCh15G002870 vs. ExPASy Swiss-Prot
Match: B8BIU8 (Mini zinc finger protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=MIF1 PE=3 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 5.7e-22 Identity = 50/70 (71.43%), Postives = 56/70 (80.00%), Query Frame = 0
BLAST of CmoCh15G002870 vs. ExPASy Swiss-Prot
Match: Q2RB28 (Mini zinc finger protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=MIF1 PE=3 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 5.7e-22 Identity = 50/70 (71.43%), Postives = 56/70 (80.00%), Query Frame = 0
BLAST of CmoCh15G002870 vs. ExPASy TrEMBL
Match: A0A6J1FM92 (mini zinc finger protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111445245 PE=4 SV=1) HSP 1 Score: 193.7 bits (491), Expect = 3.4e-46 Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0
BLAST of CmoCh15G002870 vs. ExPASy TrEMBL
Match: A0A6J1K0U7 (mini zinc finger protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111489611 PE=4 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 1.3e-45 Identity = 95/96 (98.96%), Postives = 96/96 (100.00%), Query Frame = 0
BLAST of CmoCh15G002870 vs. ExPASy TrEMBL
Match: A0A5D3CUT9 (Mini zinc finger protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold892G00300 PE=4 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 2.3e-42 Identity = 89/96 (92.71%), Postives = 91/96 (94.79%), Query Frame = 0
BLAST of CmoCh15G002870 vs. ExPASy TrEMBL
Match: A0A1S4E2E9 (mini zinc finger protein 2 OS=Cucumis melo OX=3656 GN=LOC103498482 PE=4 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 2.3e-42 Identity = 89/96 (92.71%), Postives = 91/96 (94.79%), Query Frame = 0
BLAST of CmoCh15G002870 vs. ExPASy TrEMBL
Match: A0A0A0KVJ7 (Transcription factor OS=Cucumis sativus OX=3659 GN=Csa_5G636500 PE=4 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 1.1e-39 Identity = 84/92 (91.30%), Postives = 87/92 (94.57%), Query Frame = 0
BLAST of CmoCh15G002870 vs. NCBI nr
Match: XP_022939280.1 (mini zinc finger protein 2-like [Cucurbita moschata] >XP_023550974.1 mini zinc finger protein 2-like [Cucurbita pepo subsp. pepo] >KAG6578586.1 Mini zinc finger protein 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 193.7 bits (491), Expect = 7.1e-46 Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0
BLAST of CmoCh15G002870 vs. NCBI nr
Match: XP_022993699.1 (mini zinc finger protein 2 [Cucurbita maxima]) HSP 1 Score: 191.8 bits (486), Expect = 2.7e-45 Identity = 95/96 (98.96%), Postives = 96/96 (100.00%), Query Frame = 0
BLAST of CmoCh15G002870 vs. NCBI nr
Match: XP_016902406.1 (PREDICTED: mini zinc finger protein 2 [Cucumis melo] >KAA0039501.1 mini zinc finger protein 2 [Cucumis melo var. makuwa] >TYK15255.1 mini zinc finger protein 2 [Cucumis melo var. makuwa]) HSP 1 Score: 181.0 bits (458), Expect = 4.8e-42 Identity = 89/96 (92.71%), Postives = 91/96 (94.79%), Query Frame = 0
BLAST of CmoCh15G002870 vs. NCBI nr
Match: XP_038890678.1 (mini zinc finger protein 2-like [Benincasa hispida]) HSP 1 Score: 180.6 bits (457), Expect = 6.2e-42 Identity = 87/96 (90.62%), Postives = 92/96 (95.83%), Query Frame = 0
BLAST of CmoCh15G002870 vs. NCBI nr
Match: KAG7016139.1 (Zinc-finger homeodomain protein 9, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 178.7 bits (452), Expect = 2.4e-41 Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0
BLAST of CmoCh15G002870 vs. TAIR 10
Match: AT3G28917.1 (mini zinc finger 2 ) HSP 1 Score: 147.9 bits (372), Expect = 4.2e-36 Identity = 77/97 (79.38%), Postives = 86/97 (88.66%), Query Frame = 0
BLAST of CmoCh15G002870 vs. TAIR 10
Match: AT1G74660.1 (mini zinc finger 1 ) HSP 1 Score: 113.6 bits (283), Expect = 8.7e-26 Identity = 58/102 (56.86%), Postives = 73/102 (71.57%), Query Frame = 0
BLAST of CmoCh15G002870 vs. TAIR 10
Match: AT1G18835.1 (mini zinc finger ) HSP 1 Score: 109.8 bits (273), Expect = 1.3e-24 Identity = 59/94 (62.77%), Postives = 71/94 (75.53%), Query Frame = 0
BLAST of CmoCh15G002870 vs. TAIR 10
Match: AT3G50890.1 (homeobox protein 28 ) HSP 1 Score: 88.6 bits (218), Expect = 3.0e-18 Identity = 38/55 (69.09%), Postives = 44/55 (80.00%), Query Frame = 0
BLAST of CmoCh15G002870 vs. TAIR 10
Match: AT2G18350.1 (homeobox protein 24 ) HSP 1 Score: 87.8 bits (216), Expect = 5.1e-18 Identity = 37/52 (71.15%), Postives = 44/52 (84.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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