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CmoCh15G002810 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACGATCAGGTCAGGGCGTACGTAGGCGCGGTGACCGACTTGACGGGCCACCACCGGACGGCTTTGAAGTCGGTCCCATTATGACACCGTTGGCAAACACGGGAAGTCTACGCTTTATTCTCTACGCTTATTAATATATATATATATATATATACACACACACATTGTATTTTCCTTTTTTTTAAAAAAAAATTATTTTCCATTTTAGTTGATAATTGATTGATGGATTCATTCGTCCACTTGTTATTTATTGAATTATTTGGAGTTGATAATTATTTTCAATTTCCAGAAATTTGATTTTAGTTTTTTTTATATATATATATATATATAAATTTAAAATTTGACTATGAAATTTAGGATTAAATAATTGAAAAAAAAAAAAAAAAAAGGAGAAAAGCCAGTAAAAAGCCAAGACAGAGAACCAAAACCAGAGCTGAAGGCGGAGGAGGGAAGAAAGAGTAACGAGAGAGCTTCCTTCTCTGTTATTGAGTTGGGGTCTGGAGGATTCTTCTTCTGCTCCTTGCTCCCCAACAATCTAACTTCCATGACTTCCGTTGTGGATTTCTTGCATATGAATCGCTTCGATATCGTCCAGATTTATCGTCAATACTGTGGTAACACCTTTCTTCTCCTCCTCACTGTTTCGAATTCTCGATTCAGTTCATTTCTCTTGAATCTTCTCCGATGCCTTTTCTATCCACAATTTGTTTCGTTATGCCTTTAGAATCTTAATATTTCTGCCCTTGGATTGATATCTGATTCAATATTTGAGGATCTTTAATAGAAATCTATGTATGCGTCTGCTTGCTCATGTATGTTAGCTTAGAAGATATAGGTATGTCAGAGATTTGGATGTTTTTATTTATCTTTTAGAAGATGGTTATTTGCTAACTGATTTTGGATGCTTAAGATGTTATGACGTATTTAGTCCGAAGAAGTCTAGGTGCCTTTATTTTTTGGAACCTGCATTAATAGTTTGGATGATAAAGAATGTAAAGAATTCAGTTTATGGCGATTCTCTTGCCGAGTATGATGCATGAGTGTTAATTTCAATTTTCTGTTCTGGTTAGTCCGATTCCTTAGAGAACAAATGAGCAATGTTATTACTCGTAGGTTGTCGGAAGAATAATCCAAGAATTACTCATTATTTTGTCACTTTGTGAACATTTGATAGAACTGGAACAATGTATAGAGGATATGTGTGGCCCTTGCACAAGGATGGTGCAAACTTCGAGAAGGGATCCAAAAAAGGAATTAGTAATATTGTATTATGATTTCAGAGTCTGAATTGCAGCCTTTTAGGAGAAGTTTGAGTCTTACTTAATCATTCCAGATTGATAATAGTAATATTGTTGTTATACTAGTTTCGCTTTTCTTTAGATGACAGAAAACCAGAATAAAAGGAGCCGAGAAAATGTGGGGTTGGTGGAGCTGAGTGGAAACACTAAACTCTATTGAAAGAAAGTAAAATAGTATCATGTTTTGGCTCTTGATCGTTTAGAATCAAGCTACTTATATATGCTTATCACTTTTTCGTATGAATGTAATATGAATAAATGGTTATCATGTGCATGGGTTTCTTCTGACTTCCGAGCACGTCAATGGCTTCCTATTTTTGTTTGAATGTATTACCTCTTAGTTGTCATGGAAAAAAGATCACGGTTCTGATATTTGAAACCCCCCTCATTGGTTGGACTATGAATTAATTGAACTCTAGTCTGATGTGCATTACGTTAGGAACTCAAATTAGCAATATAAGCGAGTCTTAACTTGTTTACAAACTTGTTTATAGATATTCGATCTCAAAATGGCCTTTATCATGGGAATGAAGACTCTGGACATGTTGAATCACAAATAGCTAAAAGTTCAAAGCAGGCTCTTGCAGAACTCTTCCTTTATGTGAAATCATCGCTGCAGATGGGGTATATCCCTCAAAACCTGTACTATAGCCCTCGAGTTGTTTTTTCAGATGCACTTTGTGTCAAATGGACCATGGTATTCTCGGATACGCAGAGTTACAAATCAATATTTTTTGTCCTTTCAAAAGAAGATATTTTCCAAACATATTTTAACCGACAGATGTATGAAACTAAGATAATTTATCAACTCAATTATCAAACCAAGGTAATTTTTAATAGACATGGATGCTTGCTAGTTTGATTTCATTTAGTTCTGGGTCTAGTATTTTCTGGCAGTTCAATAAAAAGAAATGTTACATGGAAAAAGAAAAAAAACTACACAGGTGCCAAATTTACAACTTGATAACGGAGGCCATCCTAAGTCATTTTTGTACTTCTGAAGCTGATCACAAGAAATAGCTGTTGATTACAGTACAAAAGTTTTTCTTATACTAACCTAGGTTATCTGAAAAGCATTTATTACACTGGCAGGAACTCAATTGTTGATGAACTAGCGAAGGTGATGTCACATCCAAACTTGATGGTAAACTCTTCCTTCCTAACAGTTTTCCTGGTTTCATACTATTCTCTGGTTTCCTTCAATTTGGCAAGCTTTTGGTATTAGCTGGTGGCAATATTTTTACTTTGTGCTTTGAATATGACAATTTTATTTTGTAGGTAGACTTCTCTGAATTTTCACGCTTTTACGAGTTTGTTTTTTTTGTGAGCCGTGAAAATGGTCAAAAGAATATCAGTAAGATTCCTTCTTTTGACTTGGATATAAAATATATGTTTTGGTTTCCCAACATAGATAACATGAAATGTGCACTAAGGAAGTCAAAGTTTCTCTTACATTCCGACAAGTTATTTAGTTTTTTATTTTATTTGAATTACAGCTGTTGGTAGGGCAGTTAGAGCATGGAGATTAGTTTTGGATGGGAGATTTCGGTTACTTAATCAATGGTGTGACTTTGTTGAGGTATCCTTTTTCCCTTTCTCTTTCTTTCCTTTTTATTTTAGAACTCAAGGACACAGTAATACAACCTACAGAAATATCTTGTTCAAATGAGGTATTTTCCTTTTGTTGAGGTACCCTTTTCCCCTCCTCTTTCGTTTGGTTATTTAAGCAGAATGATAATAATCAGGAAACCTGAATTTCTACCTGAAACTATTTTCATCGACCTGGGTTTATGGGGCCCAACAATTATGAAACCTACGTATATGCTAAATGCCCATGAATGAACTTTCCTATGTAGTTTTCCTCTGCAGACATGTTTGGATACACGTTCATATGTGTTTTACAAAAATGTATGCATTTGTCTCAATTTTTGAAGTAGATGAAATTGGGAAAATTTGGGTATTTTTATACCTAAGCTTTTAATCTATCTGATTTCTTCTATCTCGGTTTATGAATTTATGTTATTTTTGTGGTTTTATTCTTCAATTCGTTCCATGAAATAGAATTGCGATGTAGTGCAACTTATCTCCAGGGTTCTGATCTATTTAAGTTCCATAGAACAATCAGCGACACAATATATCTGAGGATACTTGGCTGCAAGTCTTGGCTTTCAGCTGTTGTGTACATGAAAATCTGGAAGGGTATGACCCGGAAGGTATATGTACTTTTTTCTTTTTTTTTAAATAATTCTTAATGGAAGTATTTTCGTAGATATTATTTGAATTAAAAATGTTAAGACTTGGGAGTACGTCAAGCAATCCGCCTCCTTATAGCTGTTGAATTTTTTTCAGTATAATTGAATTCTATCACAAGAAAAAGTATGTTGTCTATTTATATAAGAAAATTTTAATGCTTCACTTTCATGTTCAACCTTCTGTTTTGGTTCTTCTGTGGATGCTTGAAATATCATGAGAATGTGAATATTAATTGATCTCATTATGTTGTTATGGTGGCTTGGTATGATTATTTTGTTACCTCAAGTATAGGCTTAACGCCTAAAAAGGGTTTTGAGGTTTTGTGGCTTGGTATTATCATCGTGTTTAATAATTGCACAGTTCTATATTTTCTGAATTCATTAAAAAATTTCTAATTAACTTGAGGATTATGCCTCACTTCTCTTGAAGAAAGAGCCTTAAGACTACCCCCTTAGTCTTTTGGAATGTTGGGTATGCTTTTAAATAAGCACAATATTTCTCTTTTTTTACTGTAATGTCTGGAGTTACTCAGTTGCGTTCTTCAATCAGGTGCTTGGCCTGTCCTAATTGATGACTTCGTCGAGCACATGTACAGGTTCGTATGTGGAGATTCTTACACATGCGATGAGTTTGAAGTTGCATGTGGTTAAATAATTCTGGCCTATATATCATTTTAAGACTGTCGTTTTTTTATCACTGAAGCCTCGTACTAACACTTGATATGCTGATAGCATGTAATTATTGTGCAGGCGGTCAGGATCTAATAAAATTTCGAAGTTATATTGTACTTGTGGAGACTCAGAATCACAGTCTGGTGTCTTTGAAGATTCTCTTCCTGGTATAGACTCGTTCAACTGTCAAAAAAAAAAAAAAAAAAAAGTACTGTTTTACATATTGGACTTCCATGGCATGCAGAATGATATATAAGCCGTGTTTTACTGGTTTGGATTATGTCAGGATTAAAGTCTTTCCCTGGTTTGAAGAGGAAATTACCCGAGGACATGCAAGTGGACGACATTATGTCTCTGAGTGATCCTAGAACCGGCTCCATGGAGTTAATTCCTGTTACGAGCCTCAAGAAAACTAGATTCATGGGTTGCAGGCCAGTGAACTTGGAGGTAAACTTACCGTCATGCACTGCAGATGAGAACATAGATATGGTTCGACATAACGGTGCAGTAGGCTGCAAATCTCCTTGTGCTATTGAAGGTTTTCTGTCAAAAGGTTTTGCTGGGCTTTTCTCGACACGTTCAATCCTAGGATTGGATCGAGAAAGGAAAGCGTCATTCATGTGA ATGACGATCAGGTCAGGGCAGCTGAAGGCGGAGGAGGGAAGAAAGAGTAACGAGAGAGCTTCCTTCTCTGTTATTGAGTTGGGGTCTGGAGGATTCTTCTTCTGCTCCTTGCTCCCCAACAATCTAACTTCCATGACTTCCGTTGTGGATTTCTTGCATATGAATCGCTTCGATATCGTCCAGATTTATCGTCAATACTGTGATATTCGATCTCAAAATGGCCTTTATCATGGGAATGAAGACTCTGGACATGTTGAATCACAAATAGCTAAAAGTTCAAAGCAGGCTCTTGCAGAACTCTTCCTTTATGTGAAATCATCGCTGCAGATGGGGAACTCAATTGTTGATGAACTAGCGAAGGTGATGTCACATCCAAACTTGATGGTAGACTTCTCTGAATTTTCACGCTTTTACGAGTTTGTTTTTTTTGTGAGCCGTGAAAATGGTCAAAAGAATATCACTGTTGGTAGGGCAGTTAGAGCATGGAGATTAGTTTTGGATGGGAGATTTCGGTTACTTAATCAATGGTGTGACTTTGTTGAGAACAATCAGCGACACAATATATCTGAGGATACTTGGCTGCAAGTCTTGGCTTTCAGCTGTTGTGTACATGAAAATCTGGAAGGGTATGACCCGGAAGGTGCTTGGCCTGTCCTAATTGATGACTTCGTCGAGCACATGTACAGGCGGTCAGGATCTAATAAAATTTCGAAGTTATATTGTACTTGTGGAGACTCAGAATCACAGTCTGGTGTCTTTGAAGATTCTCTTCCTGGATTAAAGTCTTTCCCTGGTTTGAAGAGGAAATTACCCGAGGACATGCAAGTGGACGACATTATGTCTCTGAGTGATCCTAGAACCGGCTCCATGGAGTTAATTCCTGTTACGAGCCTCAAGAAAACTAGATTCATGGGTTGCAGGCCAGTGAACTTGGAGGTAAACTTACCGTCATGCACTGCAGATGAGAACATAGATATGGTTCGACATAACGGTGCAGTAGGCTGCAAATCTCCTTGTGCTATTGAAGGTTTTCTGTCAAAAGGTTTTGCTGGGCTTTTCTCGACACGTTCAATCCTAGGATTGGATCGAGAAAGGAAAGCGTCATTCATGTGA ATGACGATCAGGTCAGGGCAGCTGAAGGCGGAGGAGGGAAGAAAGAGTAACGAGAGAGCTTCCTTCTCTGTTATTGAGTTGGGGTCTGGAGGATTCTTCTTCTGCTCCTTGCTCCCCAACAATCTAACTTCCATGACTTCCGTTGTGGATTTCTTGCATATGAATCGCTTCGATATCGTCCAGATTTATCGTCAATACTGTGATATTCGATCTCAAAATGGCCTTTATCATGGGAATGAAGACTCTGGACATGTTGAATCACAAATAGCTAAAAGTTCAAAGCAGGCTCTTGCAGAACTCTTCCTTTATGTGAAATCATCGCTGCAGATGGGGAACTCAATTGTTGATGAACTAGCGAAGGTGATGTCACATCCAAACTTGATGGTAGACTTCTCTGAATTTTCACGCTTTTACGAGTTTGTTTTTTTTGTGAGCCGTGAAAATGGTCAAAAGAATATCACTGTTGGTAGGGCAGTTAGAGCATGGAGATTAGTTTTGGATGGGAGATTTCGGTTACTTAATCAATGGTGTGACTTTGTTGAGAACAATCAGCGACACAATATATCTGAGGATACTTGGCTGCAAGTCTTGGCTTTCAGCTGTTGTGTACATGAAAATCTGGAAGGGTATGACCCGGAAGGTGCTTGGCCTGTCCTAATTGATGACTTCGTCGAGCACATGTACAGGCGGTCAGGATCTAATAAAATTTCGAAGTTATATTGTACTTGTGGAGACTCAGAATCACAGTCTGGTGTCTTTGAAGATTCTCTTCCTGGATTAAAGTCTTTCCCTGGTTTGAAGAGGAAATTACCCGAGGACATGCAAGTGGACGACATTATGTCTCTGAGTGATCCTAGAACCGGCTCCATGGAGTTAATTCCTGTTACGAGCCTCAAGAAAACTAGATTCATGGGTTGCAGGCCAGTGAACTTGGAGGTAAACTTACCGTCATGCACTGCAGATGAGAACATAGATATGGTTCGACATAACGGTGCAGTAGGCTGCAAATCTCCTTGTGCTATTGAAGGTTTTCTGTCAAAAGGTTTTGCTGGGCTTTTCTCGACACGTTCAATCCTAGGATTGGATCGAGAAAGGAAAGCGTCATTCATGTGA MTIRSGQLKAEEGRKSNERASFSVIELGSGGFFFCSLLPNNLTSMTSVVDFLHMNRFDIVQIYRQYCDIRSQNGLYHGNEDSGHVESQIAKSSKQALAELFLYVKSSLQMGNSIVDELAKVMSHPNLMVDFSEFSRFYEFVFFVSRENGQKNITVGRAVRAWRLVLDGRFRLLNQWCDFVENNQRHNISEDTWLQVLAFSCCVHENLEGYDPEGAWPVLIDDFVEHMYRRSGSNKISKLYCTCGDSESQSGVFEDSLPGLKSFPGLKRKLPEDMQVDDIMSLSDPRTGSMELIPVTSLKKTRFMGCRPVNLEVNLPSCTADENIDMVRHNGAVGCKSPCAIEGFLSKGFAGLFSTRSILGLDRERKASFM Homology
BLAST of CmoCh15G002810 vs. ExPASy Swiss-Prot
Match: Q9MBG8 (Defective in cullin neddylation protein AAR3 OS=Arabidopsis thaliana OX=3702 GN=AAR3 PE=2 SV=1) HSP 1 Score: 285.0 bits (728), Expect = 1.2e-75 Identity = 156/311 (50.16%), Postives = 196/311 (63.02%), Query Frame = 0
BLAST of CmoCh15G002810 vs. ExPASy Swiss-Prot
Match: Q9VUQ8 (DCN1-like protein OS=Drosophila melanogaster OX=7227 GN=CG7427 PE=2 SV=2) HSP 1 Score: 104.4 bits (259), Expect = 2.9e-21 Identity = 48/124 (38.71%), Postives = 71/124 (57.26%), Query Frame = 0
BLAST of CmoCh15G002810 vs. ExPASy Swiss-Prot
Match: Q6PH85 (DCN1-like protein 2 OS=Homo sapiens OX=9606 GN=DCUN1D2 PE=1 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 9.2e-20 Identity = 42/97 (43.30%), Postives = 62/97 (63.92%), Query Frame = 0
BLAST of CmoCh15G002810 vs. ExPASy Swiss-Prot
Match: Q5ZKU1 (DCN1-like protein 1 OS=Gallus gallus OX=9031 GN=DCUN1D1 PE=2 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 2.1e-19 Identity = 54/186 (29.03%), Postives = 97/186 (52.15%), Query Frame = 0
BLAST of CmoCh15G002810 vs. ExPASy Swiss-Prot
Match: Q9QZ73 (DCN1-like protein 1 OS=Mus musculus OX=10090 GN=Dcun1d1 PE=2 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 2.7e-19 Identity = 44/124 (35.48%), Postives = 74/124 (59.68%), Query Frame = 0
BLAST of CmoCh15G002810 vs. ExPASy TrEMBL
Match: A0A6J1JZZ8 (Defective in cullin neddylation protein OS=Cucurbita maxima OX=3661 GN=LOC111489407 PE=4 SV=1) HSP 1 Score: 712.6 bits (1838), Expect = 8.5e-202 Identity = 348/361 (96.40%), Postives = 353/361 (97.78%), Query Frame = 0
BLAST of CmoCh15G002810 vs. ExPASy TrEMBL
Match: A0A6J1FFS5 (Defective in cullin neddylation protein OS=Cucurbita moschata OX=3662 GN=LOC111445042 PE=4 SV=1) HSP 1 Score: 672.9 bits (1735), Expect = 7.5e-190 Identity = 326/326 (100.00%), Postives = 326/326 (100.00%), Query Frame = 0
BLAST of CmoCh15G002810 vs. ExPASy TrEMBL
Match: A0A1S3CB35 (Defective in cullin neddylation protein OS=Cucumis melo OX=3656 GN=LOC103498486 PE=4 SV=1) HSP 1 Score: 562.8 bits (1449), Expect = 1.1e-156 Identity = 271/325 (83.38%), Postives = 296/325 (91.08%), Query Frame = 0
BLAST of CmoCh15G002810 vs. ExPASy TrEMBL
Match: A0A0A0KU82 (Defective in cullin neddylation protein OS=Cucumis sativus OX=3659 GN=Csa_5G636560 PE=4 SV=1) HSP 1 Score: 555.1 bits (1429), Expect = 2.3e-154 Identity = 270/325 (83.08%), Postives = 292/325 (89.85%), Query Frame = 0
BLAST of CmoCh15G002810 vs. ExPASy TrEMBL
Match: A0A6J1BYJ7 (Defective in cullin neddylation protein OS=Momordica charantia OX=3673 GN=LOC111006635 PE=4 SV=1) HSP 1 Score: 525.8 bits (1353), Expect = 1.5e-145 Identity = 264/326 (80.98%), Postives = 286/326 (87.73%), Query Frame = 0
BLAST of CmoCh15G002810 vs. NCBI nr
Match: KAG7016135.1 (DCN1-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 720.7 bits (1859), Expect = 6.4e-204 Identity = 352/363 (96.97%), Postives = 358/363 (98.62%), Query Frame = 0
BLAST of CmoCh15G002810 vs. NCBI nr
Match: XP_022993364.1 (uncharacterized protein LOC111489407 [Cucurbita maxima]) HSP 1 Score: 712.6 bits (1838), Expect = 1.8e-201 Identity = 348/361 (96.40%), Postives = 353/361 (97.78%), Query Frame = 0
BLAST of CmoCh15G002810 vs. NCBI nr
Match: XP_022938999.1 (DCN1-like protein 1 [Cucurbita moschata] >XP_022939000.1 DCN1-like protein 1 [Cucurbita moschata]) HSP 1 Score: 672.9 bits (1735), Expect = 1.5e-189 Identity = 326/326 (100.00%), Postives = 326/326 (100.00%), Query Frame = 0
BLAST of CmoCh15G002810 vs. NCBI nr
Match: XP_023550121.1 (DCN1-like protein 1 [Cucurbita pepo subsp. pepo] >XP_023550122.1 DCN1-like protein 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 646.0 bits (1665), Expect = 2.0e-181 Identity = 313/325 (96.31%), Postives = 318/325 (97.85%), Query Frame = 0
BLAST of CmoCh15G002810 vs. NCBI nr
Match: KAG6578581.1 (DCN1-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 607.4 bits (1565), Expect = 8.0e-170 Identity = 292/301 (97.01%), Postives = 296/301 (98.34%), Query Frame = 0
BLAST of CmoCh15G002810 vs. TAIR 10
Match: AT3G28970.1 (Domain of unknown function (DUF298) ) HSP 1 Score: 285.0 bits (728), Expect = 8.4e-77 Identity = 156/311 (50.16%), Postives = 196/311 (63.02%), Query Frame = 0
BLAST of CmoCh15G002810 vs. TAIR 10
Match: AT3G12760.1 (CONTAINS InterPro DOMAIN/s: Defective-in-cullin neddylation protein (InterPro:IPR014764), Protein of unknown function DUF298 (InterPro:IPR005176), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF298) (TAIR:AT1G15860.2); Has 857 Blast hits to 855 proteins in 202 species: Archae - 0; Bacteria - 0; Metazoa - 482; Fungi - 154; Plants - 139; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink). ) HSP 1 Score: 97.8 bits (242), Expect = 1.9e-20 Identity = 43/103 (41.75%), Postives = 64/103 (62.14%), Query Frame = 0
BLAST of CmoCh15G002810 vs. TAIR 10
Match: AT1G15860.1 (Domain of unknown function (DUF298) ) HSP 1 Score: 48.5 bits (114), Expect = 1.3e-05 Identity = 31/113 (27.43%), Postives = 58/113 (51.33%), Query Frame = 0
BLAST of CmoCh15G002810 vs. TAIR 10
Match: AT1G15860.3 (Domain of unknown function (DUF298) ) HSP 1 Score: 46.2 bits (108), Expect = 6.6e-05 Identity = 33/122 (27.05%), Postives = 54/122 (44.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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