CmoCh15G002780 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh15G002780
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Ribosomal protein L34e superfamily protein, putative
Location	Cmo_Chr15: 1328781 .. 1330007 (+)
RNA-Seq Expression	CmoCh15G002780
Synteny	CmoCh15G002780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGTAAAGGAAAAAGAGGTGGGCCAAGGCCCATGGAGTGTCCCACCAAATCATTCCCACATCATGAAGGAGAAATCCAAAGCCCAGAAGTCGAAGGAAGTAGCCCTTCTCGCAAGCTTTCCTTCATCCTCTGACTTTCACCATTGCCATTTTCCCAAAATTTTCAACCTTTTTTTCTTTCTTTTTCGTTTTCTTGTTCGTTTTCCTTCAGAGATGTGGCTTCGAACCTCCAAATCACGCTCTCTCCACTCTTTGCTTCCTCATTTTGTGCCTCCGTTTCTTTGGTTTTAATCTGTTCTGCCCCCATTAGCTCCTTTGTTTTTTGGGTTTAATCGCGCTTTCGATTCGATTGAGGAGTTGGATTGGTTTAGGCGCCGACAAATTTCTGGGTTTTTTTTTTTTTTTTTGGTAATACCCTCTTTTCGATTTGGATTTTCCCCCTGAGTTGTTCGATCTGATATCGGGGTCTGATTGATTGCTGGAGATGATCTGTGTTTGATTGAATCGGGTAGTTTCAATCGCTGTTTGATTGGAATTTGGTTTGAGATGGTCTATTTCCCATACTCGATCTCGGTCTGCAAGTCCGTTGACCAACCAACCACTATGGCGAGTTCAGTGAATTTAGCCGATTCGAGTTTCAAATCCAGGAACAAGAAGATGACTCCCTCATCGACTTGTTCGAAATTTCCCGTTTGTCATCGGTCTCGATCGGCCGTCATCGATATTGTGATTTTGATTGCTGTCGTTGGTGCTTGTGGGTTTTTGTTATTCCCTTATATGAAGCTTCTTATTGTTGAATCCCTCGAGATTTTCGGTGCGATTCTGTATTTAATGGGAGATGAAGTCTCTCGTGCTCCTTGGATTTATGGATCCATTGGACTTGGGATTTTCTGTGCTTTATTAGCTGCTTGGGTTGTTTTAATATGCACGAGCAGGAAATGTGGAAATCCCTATTGCAAGGGGCTTCGAAAGGCGGCTGAATTCGACATCCAATTGGAGACGGAGGAGTGCGTGAAGAACTCTACTCCAGTGGTTAAAAATGGCGTGAAGAAGGGGCTTTTTGAATTGCCCCGTGATCATCACCGCGAGTTAGAAGCTGAACTTAAGAAGATGGCACCTCCTAATGGAAGGGCAGTGCTCATATTTCGAGCAAGATGTGGCTGTTCTGTTGGTAGGTTGGAAGTTCCTGGGCCTAGGAAGCAGCTGAAGAAGATCAAGAAATAG

mRNA sequence

ATGGACGTAAAGGAAAAAGAGGTGGGCCAAGGCCCATGGAGTGTCCCACCAAATCATTCCCACATCATGAAGGAGAAATCCAAAGCCCAGAAGTCGAAGGAAAGATGTGGCTTCGAACCTCCAAATCACGCTCTCTCCACTCTTTGCTTCCTCATTTTGTGCCTCCGTTTCTTTGCTCCTTTGTTTTTTGGGTTTAATCGCGCTTTCGATTCGATTGAGGAGTTGGATTGGTTTAGGCGCCGACAAATTTCTGGTTTCAATCGCTGTTTGATTGGAATTTGGTTTGAGATGGTCTATTTCCCATACTCGATCTCGGTCTGCAAGTCCGTTGACCAACCAACCACTATGGCGAGTTCAGTGAATTTAGCCGATTCGAGTTTCAAATCCAGGAACAAGAAGATGACTCCCTCATCGACTTGTTCGAAATTTCCCGTTTGTCATCGGTCTCGATCGGCCGTCATCGATATTGTGATTTTGATTGCTGTCGTTGGTGCTTGTGGGTTTTTGTTATTCCCTTATATGAAGCTTCTTATTGTTGAATCCCTCGAGATTTTCGGTGCGATTCTGTATTTAATGGGAGATGAAGTCTCTCGTGCTCCTTGGATTTATGGATCCATTGGACTTGGGATTTTCTGTGCTTTATTAGCTGCTTGGGTTGTTTTAATATGCACGAGCAGGAAATGTGGAAATCCCTATTGCAAGGGGCTTCGAAAGGCGGCTGAATTCGACATCCAATTGGAGACGGAGGAGTGCGTGAAGAACTCTACTCCAGTGGTTAAAAATGGCGTGAAGAAGGGGCTTTTTGAATTGCCCCGTGATCATCACCGCGAGTTAGAAGCTGAACTTAAGAAGATGGCACCTCCTAATGGAAGGGCAGTGCTCATATTTCGAGCAAGATGTGGCTGTTCTGTTGGTAGGTTGGAAGTTCCTGGGCCTAGGAAGCAGCTGAAGAAGATCAAGAAATAG

Coding sequence (CDS)

ATGGACGTAAAGGAAAAAGAGGTGGGCCAAGGCCCATGGAGTGTCCCACCAAATCATTCCCACATCATGAAGGAGAAATCCAAAGCCCAGAAGTCGAAGGAAAGATGTGGCTTCGAACCTCCAAATCACGCTCTCTCCACTCTTTGCTTCCTCATTTTGTGCCTCCGTTTCTTTGCTCCTTTGTTTTTTGGGTTTAATCGCGCTTTCGATTCGATTGAGGAGTTGGATTGGTTTAGGCGCCGACAAATTTCTGGTTTCAATCGCTGTTTGATTGGAATTTGGTTTGAGATGGTCTATTTCCCATACTCGATCTCGGTCTGCAAGTCCGTTGACCAACCAACCACTATGGCGAGTTCAGTGAATTTAGCCGATTCGAGTTTCAAATCCAGGAACAAGAAGATGACTCCCTCATCGACTTGTTCGAAATTTCCCGTTTGTCATCGGTCTCGATCGGCCGTCATCGATATTGTGATTTTGATTGCTGTCGTTGGTGCTTGTGGGTTTTTGTTATTCCCTTATATGAAGCTTCTTATTGTTGAATCCCTCGAGATTTTCGGTGCGATTCTGTATTTAATGGGAGATGAAGTCTCTCGTGCTCCTTGGATTTATGGATCCATTGGACTTGGGATTTTCTGTGCTTTATTAGCTGCTTGGGTTGTTTTAATATGCACGAGCAGGAAATGTGGAAATCCCTATTGCAAGGGGCTTCGAAAGGCGGCTGAATTCGACATCCAATTGGAGACGGAGGAGTGCGTGAAGAACTCTACTCCAGTGGTTAAAAATGGCGTGAAGAAGGGGCTTTTTGAATTGCCCCGTGATCATCACCGCGAGTTAGAAGCTGAACTTAAGAAGATGGCACCTCCTAATGGAAGGGCAGTGCTCATATTTCGAGCAAGATGTGGCTGTTCTGTTGGTAGGTTGGAAGTTCCTGGGCCTAGGAAGCAGCTGAAGAAGATCAAGAAATAG

Protein sequence

MDVKEKEVGQGPWSVPPNHSHIMKEKSKAQKSKERCGFEPPNHALSTLCFLILCLRFFAPLFFGFNRAFDSIEELDWFRRRQISGFNRCLIGIWFEMVYFPYSISVCKSVDQPTTMASSVNLADSSFKSRNKKMTPSSTCSKFPVCHRSRSAVIDIVILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCALLAAWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPVVKNGVKKGLFELPRDHHRELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK

Homology

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BLAST of CmoCh15G002780 vs. ExPASy Swiss-Prot
Match: P0C8Q9 (Uncharacterized protein At5g19025 OS=Arabidopsis thaliana OX=3702 GN=At5g19025 PE=2 SV=3)

HSP 1 Score: 105.9 bits (263), Expect = 8.6e-22
Identity = 84/240 (35.00%), Postives = 118/240 (49.17%), Query Frame = 0


Query: 118 SSVNLADSSFKSRNKKMTPSS-------TCSKFPVCHRSRSAVIDIVILIAVVGACGFLL 177
           SS     ++ +  +  M PSS       + S   +C  S SA +D++ILI V+ +  FLL
Sbjct: 8   SSAASTTTAVEDNSTTMPPSSRSAANQNSSSSLHLCKHSPSATLDLLILILVLFSGTFLL 67

Query: 178 FPYMKLLIVESLEIFGA----------------ILYLMGDEVSR-----------APWIY 237
             Y   LI  SL +  +                I++   D  +             P   
Sbjct: 68  SSYFSYLI-HSLSLLSSHFPSITISLSSLLPPLIIFFSSDHSTEDEDHHHPSGKIPPPAS 127

Query: 238 GSIGLGIFCALLAAWVVLIC--TSRKCGNPYCKGLRKAAEFDIQLETEECVKN-STPVVK 297
                 +F A   A++ L C   SRKC NP CKG++KA EFD+QL+TEECVK+ S   + 
Sbjct: 128 FFFAFAVFFAASIAFLDLCCGSRSRKCRNPKCKGMKKAMEFDLQLQTEECVKSGSVKEID 187

Query: 298 NGVKKGLFELPRDHHRELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIK 321
               KG  E   D+   L AEL+KMAP NGRAVLIFR++CGC + +LE  GP++  +  K
Sbjct: 188 RLPWKGGSESNPDYEC-LRAELRKMAPVNGRAVLIFRSKCGCPIAKLEGWGPKRSRRHKK 245

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BLAST of CmoCh15G002780 vs. ExPASy TrEMBL
Match: A0A6J1FFK9 (uncharacterized protein At5g19025-like OS=Cucurbita moschata OX=3662 GN=LOC111445040 PE=4 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 6.8e-123
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0


Query: 97  MVYFPYSISVCKSVDQPTTMASSVNLADSSFKSRNKKMTPSSTCSKFPVCHRSRSAVIDI 156
           MVYFPYSISVCKSVDQPTTMASSVNLADSSFKSRNKKMTPSSTCSKFPVCHRSRSAVIDI
Sbjct: 1   MVYFPYSISVCKSVDQPTTMASSVNLADSSFKSRNKKMTPSSTCSKFPVCHRSRSAVIDI 60

Query: 157 VILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCALLA 216
           VILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCALLA
Sbjct: 61  VILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCALLA 120

Query: 217 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPVVKNGVKKGLFELPRDHHR 276
           AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPVVKNGVKKGLFELPRDHHR
Sbjct: 121 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPVVKNGVKKGLFELPRDHHR 180

Query: 277 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 322
           ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK
Sbjct: 181 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 225

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BLAST of CmoCh15G002780 vs. ExPASy TrEMBL
Match: A0A6J1K2Z1 (uncharacterized protein At5g19025-like OS=Cucurbita maxima OX=3661 GN=LOC111489591 PE=4 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 6.4e-121
Identity = 222/225 (98.67%), Postives = 223/225 (99.11%), Query Frame = 0


Query: 97  MVYFPYSISVCKSVDQPTTMASSVNLADSSFKSRNKKMTPSSTCSKFPVCHRSRSAVIDI 156
           MVYFPYSISVCKSVDQPT MASSVNLADSSFKSRNKKMTPSSTCSKFPVCHRSRSAVIDI
Sbjct: 1   MVYFPYSISVCKSVDQPTIMASSVNLADSSFKSRNKKMTPSSTCSKFPVCHRSRSAVIDI 60

Query: 157 VILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCALLA 216
           VILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCALLA
Sbjct: 61  VILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCALLA 120

Query: 217 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPVVKNGVKKGLFELPRDHHR 276
           AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTP+VKNGVKKGLFELP DHHR
Sbjct: 121 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPCDHHR 180

Query: 277 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 322
           ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK
Sbjct: 181 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 225

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BLAST of CmoCh15G002780 vs. ExPASy TrEMBL
Match: A0A0A0KVL2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G636590 PE=4 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 6.6e-118
Identity = 217/225 (96.44%), Postives = 220/225 (97.78%), Query Frame = 0


Query: 97  MVYFPYSISVCKSVDQPTTMASSVNLADSSFKSRNKKMTPSSTCSKFPVCHRSRSAVIDI 156
           MVYFPYSISVCKSVDQPT MASSVNLADSS KSRNKKMT SSTCSKFPVCHRSRSAVIDI
Sbjct: 1   MVYFPYSISVCKSVDQPTVMASSVNLADSSSKSRNKKMTASSTCSKFPVCHRSRSAVIDI 60

Query: 157 VILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCALLA 216
           VILIAVVGACGFLLFPYMKL+IVESLEIFGAILYLMG+EVSRAPWIYGSIGL IFCA LA
Sbjct: 61  VILIAVVGACGFLLFPYMKLVIVESLEIFGAILYLMGEEVSRAPWIYGSIGLSIFCASLA 120

Query: 217 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPVVKNGVKKGLFELPRDHHR 276
           AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTP+VKNGVKKGLFELPRDHHR
Sbjct: 121 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPRDHHR 180

Query: 277 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 322
           ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK
Sbjct: 181 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 225

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BLAST of CmoCh15G002780 vs. ExPASy TrEMBL
Match: A0A5D3CWE1 (Putative Ribosomal protein L34e superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold892G00180 PE=4 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 7.3e-117
Identity = 215/225 (95.56%), Postives = 219/225 (97.33%), Query Frame = 0


Query: 97  MVYFPYSISVCKSVDQPTTMASSVNLADSSFKSRNKKMTPSSTCSKFPVCHRSRSAVIDI 156
           MVYFPYSISVCKSVDQPT MASSVNLADSS KSRNK+M  SSTCSKFPVCHRSRSAVIDI
Sbjct: 1   MVYFPYSISVCKSVDQPTVMASSVNLADSSSKSRNKRMPASSTCSKFPVCHRSRSAVIDI 60

Query: 157 VILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCALLA 216
           VILIAVVGACGFLLFPYMKL+IVESLEIFGAILYLMG+EVSRAPWIYGSIGL IFCA LA
Sbjct: 61  VILIAVVGACGFLLFPYMKLVIVESLEIFGAILYLMGEEVSRAPWIYGSIGLSIFCASLA 120

Query: 217 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPVVKNGVKKGLFELPRDHHR 276
           AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTP+VKNGVKKGLFELPRDHHR
Sbjct: 121 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPRDHHR 180

Query: 277 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 322
           ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK
Sbjct: 181 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 225

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BLAST of CmoCh15G002780 vs. ExPASy TrEMBL
Match: A0A1S3CAF3 (uncharacterized protein At5g19025 OS=Cucumis melo OX=3656 GN=LOC103498491 PE=4 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 7.3e-117
Identity = 215/225 (95.56%), Postives = 219/225 (97.33%), Query Frame = 0


Query: 97  MVYFPYSISVCKSVDQPTTMASSVNLADSSFKSRNKKMTPSSTCSKFPVCHRSRSAVIDI 156
           MVYFPYSISVCKSVDQPT MASSVNLADSS KSRNK+M  SSTCSKFPVCHRSRSAVIDI
Sbjct: 1   MVYFPYSISVCKSVDQPTVMASSVNLADSSSKSRNKRMPASSTCSKFPVCHRSRSAVIDI 60

Query: 157 VILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCALLA 216
           VILIAVVGACGFLLFPYMKL+IVESLEIFGAILYLMG+EVSRAPWIYGSIGL IFCA LA
Sbjct: 61  VILIAVVGACGFLLFPYMKLVIVESLEIFGAILYLMGEEVSRAPWIYGSIGLSIFCASLA 120

Query: 217 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPVVKNGVKKGLFELPRDHHR 276
           AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTP+VKNGVKKGLFELPRDHHR
Sbjct: 121 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPRDHHR 180

Query: 277 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 322
           ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK
Sbjct: 181 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 225

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BLAST of CmoCh15G002780 vs. NCBI nr
Match: XP_022938995.1 (uncharacterized protein At5g19025-like [Cucurbita moschata] >XP_022938997.1 uncharacterized protein At5g19025-like [Cucurbita moschata])

HSP 1 Score: 450.3 bits (1157), Expect = 1.4e-122
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0


Query: 97  MVYFPYSISVCKSVDQPTTMASSVNLADSSFKSRNKKMTPSSTCSKFPVCHRSRSAVIDI 156
           MVYFPYSISVCKSVDQPTTMASSVNLADSSFKSRNKKMTPSSTCSKFPVCHRSRSAVIDI
Sbjct: 1   MVYFPYSISVCKSVDQPTTMASSVNLADSSFKSRNKKMTPSSTCSKFPVCHRSRSAVIDI 60

Query: 157 VILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCALLA 216
           VILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCALLA
Sbjct: 61  VILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCALLA 120

Query: 217 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPVVKNGVKKGLFELPRDHHR 276
           AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPVVKNGVKKGLFELPRDHHR
Sbjct: 121 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPVVKNGVKKGLFELPRDHHR 180

Query: 277 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 322
           ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK
Sbjct: 181 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 225

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BLAST of CmoCh15G002780 vs. NCBI nr
Match: XP_023551693.1 (uncharacterized protein At5g19025-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 446.8 bits (1148), Expect = 1.6e-121
Identity = 223/225 (99.11%), Postives = 224/225 (99.56%), Query Frame = 0


Query: 97  MVYFPYSISVCKSVDQPTTMASSVNLADSSFKSRNKKMTPSSTCSKFPVCHRSRSAVIDI 156
           MVYFPYSISVCKSVDQPT MASSVNLADSSFKSRNKKMTPSSTCSKFPVCHRSRSAVIDI
Sbjct: 1   MVYFPYSISVCKSVDQPTIMASSVNLADSSFKSRNKKMTPSSTCSKFPVCHRSRSAVIDI 60

Query: 157 VILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCALLA 216
           VILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCALLA
Sbjct: 61  VILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCALLA 120

Query: 217 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPVVKNGVKKGLFELPRDHHR 276
           AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTP+VKNGVKKGLFELPRDHHR
Sbjct: 121 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPRDHHR 180

Query: 277 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 322
           ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK
Sbjct: 181 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 225

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BLAST of CmoCh15G002780 vs. NCBI nr
Match: KAG6578578.1 (hypothetical protein SDJN03_23026, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 444.9 bits (1143), Expect = 5.9e-121
Identity = 223/225 (99.11%), Postives = 223/225 (99.11%), Query Frame = 0


Query: 97  MVYFPYSISVCKSVDQPTTMASSVNLADSSFKSRNKKMTPSSTCSKFPVCHRSRSAVIDI 156
           MVYFPYSISVCKSVDQPT MASSVNLADSSFKSRNKKMTPSSTCSKFPVCHRSRSAVIDI
Sbjct: 1   MVYFPYSISVCKSVDQPTIMASSVNLADSSFKSRNKKMTPSSTCSKFPVCHRSRSAVIDI 60

Query: 157 VILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCALLA 216
           VILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCALLA
Sbjct: 61  VILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCALLA 120

Query: 217 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPVVKNGVKKGLFELPRDHHR 276
           AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPVVKNGVKKGLFELPRDHHR
Sbjct: 121 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPVVKNGVKKGLFELPRDHHR 180

Query: 277 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 322
           ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPG RKQLKKIKK
Sbjct: 181 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGSRKQLKKIKK 225

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BLAST of CmoCh15G002780 vs. NCBI nr
Match: XP_022993668.1 (uncharacterized protein At5g19025-like [Cucurbita maxima])

HSP 1 Score: 443.7 bits (1140), Expect = 1.3e-120
Identity = 222/225 (98.67%), Postives = 223/225 (99.11%), Query Frame = 0


Query: 97  MVYFPYSISVCKSVDQPTTMASSVNLADSSFKSRNKKMTPSSTCSKFPVCHRSRSAVIDI 156
           MVYFPYSISVCKSVDQPT MASSVNLADSSFKSRNKKMTPSSTCSKFPVCHRSRSAVIDI
Sbjct: 1   MVYFPYSISVCKSVDQPTIMASSVNLADSSFKSRNKKMTPSSTCSKFPVCHRSRSAVIDI 60

Query: 157 VILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCALLA 216
           VILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCALLA
Sbjct: 61  VILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCALLA 120

Query: 217 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPVVKNGVKKGLFELPRDHHR 276
           AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTP+VKNGVKKGLFELP DHHR
Sbjct: 121 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPCDHHR 180

Query: 277 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 322
           ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK
Sbjct: 181 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 225

[Close]

BLAST of CmoCh15G002780 vs. NCBI nr
Match: XP_004148702.1 (uncharacterized protein At5g19025 [Cucumis sativus])

HSP 1 Score: 433.7 bits (1114), Expect = 1.4e-117
Identity = 217/225 (96.44%), Postives = 220/225 (97.78%), Query Frame = 0


Query: 97  MVYFPYSISVCKSVDQPTTMASSVNLADSSFKSRNKKMTPSSTCSKFPVCHRSRSAVIDI 156
           MVYFPYSISVCKSVDQPT MASSVNLADSS KSRNKKMT SSTCSKFPVCHRSRSAVIDI
Sbjct: 1   MVYFPYSISVCKSVDQPTVMASSVNLADSSSKSRNKKMTASSTCSKFPVCHRSRSAVIDI 60

Query: 157 VILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCALLA 216
           VILIAVVGACGFLLFPYMKL+IVESLEIFGAILYLMG+EVSRAPWIYGSIGL IFCA LA
Sbjct: 61  VILIAVVGACGFLLFPYMKLVIVESLEIFGAILYLMGEEVSRAPWIYGSIGLSIFCASLA 120

Query: 217 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPVVKNGVKKGLFELPRDHHR 276
           AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTP+VKNGVKKGLFELPRDHHR
Sbjct: 121 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPRDHHR 180

Query: 277 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 322
           ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK
Sbjct: 181 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 225

[Close]

BLAST of CmoCh15G002780 vs. TAIR 10
Match: AT3G01170.1 (Ribosomal protein L34e superfamily protein )

HSP 1 Score: 262.7 bits (670), Expect = 3.9e-70
Identity = 139/228 (60.96%), Postives = 171/228 (75.00%), Query Frame = 0


Query: 97  MVYFPYSISVCKSVDQPTTMASSVNLADSSFKSRN--KKMTPSSTCSKFPVCHRSRSAVI 156
           MVY   SISVC SVD        + ++ SS KSRN   K + S TCSKFPVC  S+SA I
Sbjct: 1   MVYLHSSISVCNSVD-------PMIMSHSSPKSRNTRNKSSSSPTCSKFPVCDGSQSAAI 60

Query: 157 DIVILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCAL 216
           D+VILIAV+ ACGFL FPY+KL+ ++S+E+F  +  L+  E+ + P +YGS+ L IFCA 
Sbjct: 61  DVVILIAVITACGFLFFPYVKLITLKSIEVFSDLSLLVKQEILQNPIVYGSLALSIFCAA 120

Query: 217 LAAW-VVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPVVKNGVKKGLFELPRD 276
           ++ W V+L+CT ++CG P CKGLRKA EFDIQLETEECVK+S+       K+G+FELPR 
Sbjct: 121 ISTWLVILLCTMQRCGKPNCKGLRKAVEFDIQLETEECVKSSSN------KRGMFELPRV 180

Query: 277 HHRELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 322
           HHRELEAELKKMAPPNGRAVL+FRARCGCSV RL V GP+KQ +KIKK
Sbjct: 181 HHRELEAELKKMAPPNGRAVLVFRARCGCSVRRLVVSGPKKQQRKIKK 215

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BLAST of CmoCh15G002780 vs. TAIR 10
Match: AT5G15260.1 (Ribosomal protein L34e superfamily protein )

HSP 1 Score: 240.0 bits (611), Expect = 2.7e-63
Identity = 140/238 (58.82%), Postives = 172/238 (72.27%), Query Frame = 0


Query: 97  MVYFPYSISVCKSVDQPTTMASSVNLADSSFKSR----NKKMTPSSTCSKFPV-CHRSRS 156
           MVYF  SIS+   VDQ   MA S +    S +SR    N+K + SS  S F V C  SRS
Sbjct: 1   MVYFQNSISL---VDQSPIMAHSPDFHHHSKQSRTSSSNRKSSSSSCSSNFSVCCDGSRS 60

Query: 157 AVIDIVILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSR--APWIYGSIGLG 216
           A ID+VILIAV+ + GFL+FPY+K + ++S+EIF  +  L+ +E+ R   P +YG I L 
Sbjct: 61  AAIDVVILIAVITSSGFLIFPYIKFITIKSVEIFSELSCLVKEEILRNPDPIVYGLIALS 120

Query: 217 IFCALLAAW--VVLICTSRKCGNPYCKGLRKA-AEFDIQLETEECVKNSTPVVKNGVKKG 276
           I C  L+AW  V+L+C+  +CG P CKGLRKA AEFDIQLETE+CVK+S    K+  KKG
Sbjct: 121 ISCTALSAWMIVILLCSRHRCGKPNCKGLRKANAEFDIQLETEDCVKSSNS-GKSVSKKG 180

Query: 277 LFELPRDHHRELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRK---QLKKIKK 322
           LFELPRDHHRELEAELKKMAPPNGRAVL+FRA+CGCSVGRLEVPGP+K   Q +K+KK
Sbjct: 181 LFELPRDHHRELEAELKKMAPPNGRAVLVFRAKCGCSVGRLEVPGPKKQQLQQRKVKK 234

[Close]

BLAST of CmoCh15G002780 vs. TAIR 10
Match: AT3G06180.1 (Ribosomal protein L34e superfamily protein )

HSP 1 Score: 124.4 bits (311), Expect = 1.7e-28
Identity = 82/215 (38.14%), Postives = 121/215 (56.28%), Query Frame = 0


Query: 109 SVDQPTTMASSVNLADSSFKSRNKKMTPSSTCSKFPVCHRSRSAVIDIVILIAVVGACGF 168
           S ++ +T  S    + +S  + N   + SS+ S   +C  S SA +D++ILI V+ +  F
Sbjct: 8   SDEEHSTTNSMPPSSSASRSASNHSSSSSSSSSSLHLCKHSPSATLDLLILILVLFSGAF 67

Query: 169 LLFPYMKL------LIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCALLAAWVVLI 228
           LL  Y         L+        ++++   +++S  P         +F A   A++ L 
Sbjct: 68  LLSSYFSYLFHSFSLLSSHFPSLSSLIFSDDEDLSSIPPASYFFAFAVFFAASIAFLDLC 127

Query: 229 C--TSRKCGNPYCKGLRKAAEFDIQLETEECVKN-STPVVKNGVKKGLFELPRDHHRELE 288
           C   SRKC NP CKGL+KA EFD+QL+TEECVK+ +T  +     KG  E   D+   L 
Sbjct: 128 CGPRSRKCRNPKCKGLKKAMEFDLQLQTEECVKSGATKEIDRLPWKGGSESNPDYEC-LR 187

Query: 289 AELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRK 315
           AEL++MAPPNGRAVL+FR+RCGC V +LE  GP++
Sbjct: 188 AELRRMAPPNGRAVLLFRSRCGCPVAKLEGWGPKR 221

[Close]

BLAST of CmoCh15G002780 vs. TAIR 10
Match: AT5G19025.1 (Ribosomal protein L34e superfamily protein )

HSP 1 Score: 105.9 bits (263), Expect = 6.1e-23
Identity = 84/240 (35.00%), Postives = 118/240 (49.17%), Query Frame = 0


Query: 118 SSVNLADSSFKSRNKKMTPSS-------TCSKFPVCHRSRSAVIDIVILIAVVGACGFLL 177
           SS     ++ +  +  M PSS       + S   +C  S SA +D++ILI V+ +  FLL
Sbjct: 8   SSAASTTTAVEDNSTTMPPSSRSAANQNSSSSLHLCKHSPSATLDLLILILVLFSGTFLL 67

Query: 178 FPYMKLLIVESLEIFGA----------------ILYLMGDEVSR-----------APWIY 237
             Y   LI  SL +  +                I++   D  +             P   
Sbjct: 68  SSYFSYLI-HSLSLLSSHFPSITISLSSLLPPLIIFFSSDHSTEDEDHHHPSGKIPPPAS 127

Query: 238 GSIGLGIFCALLAAWVVLIC--TSRKCGNPYCKGLRKAAEFDIQLETEECVKN-STPVVK 297
                 +F A   A++ L C   SRKC NP CKG++KA EFD+QL+TEECVK+ S   + 
Sbjct: 128 FFFAFAVFFAASIAFLDLCCGSRSRKCRNPKCKGMKKAMEFDLQLQTEECVKSGSVKEID 187

Query: 298 NGVKKGLFELPRDHHRELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIK 321
               KG  E   D+   L AEL+KMAP NGRAVLIFR++CGC + +LE  GP++  +  K
Sbjct: 188 RLPWKGGSESNPDYEC-LRAELRKMAPVNGRAVLIFRSKCGCPIAKLEGWGPKRSRRHKK 245

The following BLAST results are available for this feature:

BLAST of CmoCh15G002780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0C8Q9	8.6e-22	35.00	Uncharacterized protein At5g19025 OS=Arabidopsis thaliana OX=3702 GN=At5g19025 P...	[more]

BLAST of CmoCh15G002780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FFK9	6.8e-123	100.00	uncharacterized protein At5g19025-like OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1K2Z1	6.4e-121	98.67	uncharacterized protein At5g19025-like OS=Cucurbita maxima OX=3661 GN=LOC1114895...	[more]
A0A0A0KVL2	6.6e-118	96.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G636590 PE=4 SV=1	[more]
A0A5D3CWE1	7.3e-117	95.56	Putative Ribosomal protein L34e superfamily protein OS=Cucumis melo var. makuwa ...	[more]
A0A1S3CAF3	7.3e-117	95.56	uncharacterized protein At5g19025 OS=Cucumis melo OX=3656 GN=LOC103498491 PE=4 S...	[more]

BLAST of CmoCh15G002780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022938995.1	1.4e-122	100.00	uncharacterized protein At5g19025-like [Cucurbita moschata] >XP_022938997.1 unch...	[more]
XP_023551693.1	1.6e-121	99.11	uncharacterized protein At5g19025-like [Cucurbita pepo subsp. pepo]	[more]
KAG6578578.1	5.9e-121	99.11	hypothetical protein SDJN03_23026, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022993668.1	1.3e-120	98.67	uncharacterized protein At5g19025-like [Cucurbita maxima]	[more]
XP_004148702.1	1.4e-117	96.44	uncharacterized protein At5g19025 [Cucumis sativus]	[more]

BLAST of CmoCh15G002780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G01170.1	3.9e-70	60.96	Ribosomal protein L34e superfamily protein	[more]
AT5G15260.1	2.7e-63	58.82	Ribosomal protein L34e superfamily protein	[more]
AT3G06180.1	1.7e-28	38.14	Ribosomal protein L34e superfamily protein	[more]
AT5G19025.1	6.1e-23	35.00	Ribosomal protein L34e superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR46996	OS05G0488500 PROTEIN	coord: 97..321
None	No IPR available	PANTHER	PTHR46996:SF4	BNAC09G54710D PROTEIN	coord: 97..321

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh15G002780.1	CmoCh15G002780.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane