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CmoCh15G002780 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACGTAAAGGAAAAAGAGGTGGGCCAAGGCCCATGGAGTGTCCCACCAAATCATTCCCACATCATGAAGGAGAAATCCAAAGCCCAGAAGTCGAAGGAAGTAGCCCTTCTCGCAAGCTTTCCTTCATCCTCTGACTTTCACCATTGCCATTTTCCCAAAATTTTCAACCTTTTTTTCTTTCTTTTTCGTTTTCTTGTTCGTTTTCCTTCAGAGATGTGGCTTCGAACCTCCAAATCACGCTCTCTCCACTCTTTGCTTCCTCATTTTGTGCCTCCGTTTCTTTGGTTTTAATCTGTTCTGCCCCCATTAGCTCCTTTGTTTTTTGGGTTTAATCGCGCTTTCGATTCGATTGAGGAGTTGGATTGGTTTAGGCGCCGACAAATTTCTGGGTTTTTTTTTTTTTTTTTGGTAATACCCTCTTTTCGATTTGGATTTTCCCCCTGAGTTGTTCGATCTGATATCGGGGTCTGATTGATTGCTGGAGATGATCTGTGTTTGATTGAATCGGGTAGTTTCAATCGCTGTTTGATTGGAATTTGGTTTGAGATGGTCTATTTCCCATACTCGATCTCGGTCTGCAAGTCCGTTGACCAACCAACCACTATGGCGAGTTCAGTGAATTTAGCCGATTCGAGTTTCAAATCCAGGAACAAGAAGATGACTCCCTCATCGACTTGTTCGAAATTTCCCGTTTGTCATCGGTCTCGATCGGCCGTCATCGATATTGTGATTTTGATTGCTGTCGTTGGTGCTTGTGGGTTTTTGTTATTCCCTTATATGAAGCTTCTTATTGTTGAATCCCTCGAGATTTTCGGTGCGATTCTGTATTTAATGGGAGATGAAGTCTCTCGTGCTCCTTGGATTTATGGATCCATTGGACTTGGGATTTTCTGTGCTTTATTAGCTGCTTGGGTTGTTTTAATATGCACGAGCAGGAAATGTGGAAATCCCTATTGCAAGGGGCTTCGAAAGGCGGCTGAATTCGACATCCAATTGGAGACGGAGGAGTGCGTGAAGAACTCTACTCCAGTGGTTAAAAATGGCGTGAAGAAGGGGCTTTTTGAATTGCCCCGTGATCATCACCGCGAGTTAGAAGCTGAACTTAAGAAGATGGCACCTCCTAATGGAAGGGCAGTGCTCATATTTCGAGCAAGATGTGGCTGTTCTGTTGGTAGGTTGGAAGTTCCTGGGCCTAGGAAGCAGCTGAAGAAGATCAAGAAATAG ATGGACGTAAAGGAAAAAGAGGTGGGCCAAGGCCCATGGAGTGTCCCACCAAATCATTCCCACATCATGAAGGAGAAATCCAAAGCCCAGAAGTCGAAGGAAAGATGTGGCTTCGAACCTCCAAATCACGCTCTCTCCACTCTTTGCTTCCTCATTTTGTGCCTCCGTTTCTTTGCTCCTTTGTTTTTTGGGTTTAATCGCGCTTTCGATTCGATTGAGGAGTTGGATTGGTTTAGGCGCCGACAAATTTCTGGTTTCAATCGCTGTTTGATTGGAATTTGGTTTGAGATGGTCTATTTCCCATACTCGATCTCGGTCTGCAAGTCCGTTGACCAACCAACCACTATGGCGAGTTCAGTGAATTTAGCCGATTCGAGTTTCAAATCCAGGAACAAGAAGATGACTCCCTCATCGACTTGTTCGAAATTTCCCGTTTGTCATCGGTCTCGATCGGCCGTCATCGATATTGTGATTTTGATTGCTGTCGTTGGTGCTTGTGGGTTTTTGTTATTCCCTTATATGAAGCTTCTTATTGTTGAATCCCTCGAGATTTTCGGTGCGATTCTGTATTTAATGGGAGATGAAGTCTCTCGTGCTCCTTGGATTTATGGATCCATTGGACTTGGGATTTTCTGTGCTTTATTAGCTGCTTGGGTTGTTTTAATATGCACGAGCAGGAAATGTGGAAATCCCTATTGCAAGGGGCTTCGAAAGGCGGCTGAATTCGACATCCAATTGGAGACGGAGGAGTGCGTGAAGAACTCTACTCCAGTGGTTAAAAATGGCGTGAAGAAGGGGCTTTTTGAATTGCCCCGTGATCATCACCGCGAGTTAGAAGCTGAACTTAAGAAGATGGCACCTCCTAATGGAAGGGCAGTGCTCATATTTCGAGCAAGATGTGGCTGTTCTGTTGGTAGGTTGGAAGTTCCTGGGCCTAGGAAGCAGCTGAAGAAGATCAAGAAATAG ATGGACGTAAAGGAAAAAGAGGTGGGCCAAGGCCCATGGAGTGTCCCACCAAATCATTCCCACATCATGAAGGAGAAATCCAAAGCCCAGAAGTCGAAGGAAAGATGTGGCTTCGAACCTCCAAATCACGCTCTCTCCACTCTTTGCTTCCTCATTTTGTGCCTCCGTTTCTTTGCTCCTTTGTTTTTTGGGTTTAATCGCGCTTTCGATTCGATTGAGGAGTTGGATTGGTTTAGGCGCCGACAAATTTCTGGTTTCAATCGCTGTTTGATTGGAATTTGGTTTGAGATGGTCTATTTCCCATACTCGATCTCGGTCTGCAAGTCCGTTGACCAACCAACCACTATGGCGAGTTCAGTGAATTTAGCCGATTCGAGTTTCAAATCCAGGAACAAGAAGATGACTCCCTCATCGACTTGTTCGAAATTTCCCGTTTGTCATCGGTCTCGATCGGCCGTCATCGATATTGTGATTTTGATTGCTGTCGTTGGTGCTTGTGGGTTTTTGTTATTCCCTTATATGAAGCTTCTTATTGTTGAATCCCTCGAGATTTTCGGTGCGATTCTGTATTTAATGGGAGATGAAGTCTCTCGTGCTCCTTGGATTTATGGATCCATTGGACTTGGGATTTTCTGTGCTTTATTAGCTGCTTGGGTTGTTTTAATATGCACGAGCAGGAAATGTGGAAATCCCTATTGCAAGGGGCTTCGAAAGGCGGCTGAATTCGACATCCAATTGGAGACGGAGGAGTGCGTGAAGAACTCTACTCCAGTGGTTAAAAATGGCGTGAAGAAGGGGCTTTTTGAATTGCCCCGTGATCATCACCGCGAGTTAGAAGCTGAACTTAAGAAGATGGCACCTCCTAATGGAAGGGCAGTGCTCATATTTCGAGCAAGATGTGGCTGTTCTGTTGGTAGGTTGGAAGTTCCTGGGCCTAGGAAGCAGCTGAAGAAGATCAAGAAATAG MDVKEKEVGQGPWSVPPNHSHIMKEKSKAQKSKERCGFEPPNHALSTLCFLILCLRFFAPLFFGFNRAFDSIEELDWFRRRQISGFNRCLIGIWFEMVYFPYSISVCKSVDQPTTMASSVNLADSSFKSRNKKMTPSSTCSKFPVCHRSRSAVIDIVILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCALLAAWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPVVKNGVKKGLFELPRDHHRELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK Homology
BLAST of CmoCh15G002780 vs. ExPASy Swiss-Prot
Match: P0C8Q9 (Uncharacterized protein At5g19025 OS=Arabidopsis thaliana OX=3702 GN=At5g19025 PE=2 SV=3) HSP 1 Score: 105.9 bits (263), Expect = 8.6e-22 Identity = 84/240 (35.00%), Postives = 118/240 (49.17%), Query Frame = 0
BLAST of CmoCh15G002780 vs. ExPASy TrEMBL
Match: A0A6J1FFK9 (uncharacterized protein At5g19025-like OS=Cucurbita moschata OX=3662 GN=LOC111445040 PE=4 SV=1) HSP 1 Score: 450.3 bits (1157), Expect = 6.8e-123 Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0
BLAST of CmoCh15G002780 vs. ExPASy TrEMBL
Match: A0A6J1K2Z1 (uncharacterized protein At5g19025-like OS=Cucurbita maxima OX=3661 GN=LOC111489591 PE=4 SV=1) HSP 1 Score: 443.7 bits (1140), Expect = 6.4e-121 Identity = 222/225 (98.67%), Postives = 223/225 (99.11%), Query Frame = 0
BLAST of CmoCh15G002780 vs. ExPASy TrEMBL
Match: A0A0A0KVL2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G636590 PE=4 SV=1) HSP 1 Score: 433.7 bits (1114), Expect = 6.6e-118 Identity = 217/225 (96.44%), Postives = 220/225 (97.78%), Query Frame = 0
BLAST of CmoCh15G002780 vs. ExPASy TrEMBL
Match: A0A5D3CWE1 (Putative Ribosomal protein L34e superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold892G00180 PE=4 SV=1) HSP 1 Score: 430.3 bits (1105), Expect = 7.3e-117 Identity = 215/225 (95.56%), Postives = 219/225 (97.33%), Query Frame = 0
BLAST of CmoCh15G002780 vs. ExPASy TrEMBL
Match: A0A1S3CAF3 (uncharacterized protein At5g19025 OS=Cucumis melo OX=3656 GN=LOC103498491 PE=4 SV=1) HSP 1 Score: 430.3 bits (1105), Expect = 7.3e-117 Identity = 215/225 (95.56%), Postives = 219/225 (97.33%), Query Frame = 0
BLAST of CmoCh15G002780 vs. NCBI nr
Match: XP_022938995.1 (uncharacterized protein At5g19025-like [Cucurbita moschata] >XP_022938997.1 uncharacterized protein At5g19025-like [Cucurbita moschata]) HSP 1 Score: 450.3 bits (1157), Expect = 1.4e-122 Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0
BLAST of CmoCh15G002780 vs. NCBI nr
Match: XP_023551693.1 (uncharacterized protein At5g19025-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 446.8 bits (1148), Expect = 1.6e-121 Identity = 223/225 (99.11%), Postives = 224/225 (99.56%), Query Frame = 0
BLAST of CmoCh15G002780 vs. NCBI nr
Match: KAG6578578.1 (hypothetical protein SDJN03_23026, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 444.9 bits (1143), Expect = 5.9e-121 Identity = 223/225 (99.11%), Postives = 223/225 (99.11%), Query Frame = 0
BLAST of CmoCh15G002780 vs. NCBI nr
Match: XP_022993668.1 (uncharacterized protein At5g19025-like [Cucurbita maxima]) HSP 1 Score: 443.7 bits (1140), Expect = 1.3e-120 Identity = 222/225 (98.67%), Postives = 223/225 (99.11%), Query Frame = 0
BLAST of CmoCh15G002780 vs. NCBI nr
Match: XP_004148702.1 (uncharacterized protein At5g19025 [Cucumis sativus]) HSP 1 Score: 433.7 bits (1114), Expect = 1.4e-117 Identity = 217/225 (96.44%), Postives = 220/225 (97.78%), Query Frame = 0
BLAST of CmoCh15G002780 vs. TAIR 10
Match: AT3G01170.1 (Ribosomal protein L34e superfamily protein ) HSP 1 Score: 262.7 bits (670), Expect = 3.9e-70 Identity = 139/228 (60.96%), Postives = 171/228 (75.00%), Query Frame = 0
BLAST of CmoCh15G002780 vs. TAIR 10
Match: AT5G15260.1 (Ribosomal protein L34e superfamily protein ) HSP 1 Score: 240.0 bits (611), Expect = 2.7e-63 Identity = 140/238 (58.82%), Postives = 172/238 (72.27%), Query Frame = 0
BLAST of CmoCh15G002780 vs. TAIR 10
Match: AT3G06180.1 (Ribosomal protein L34e superfamily protein ) HSP 1 Score: 124.4 bits (311), Expect = 1.7e-28 Identity = 82/215 (38.14%), Postives = 121/215 (56.28%), Query Frame = 0
BLAST of CmoCh15G002780 vs. TAIR 10
Match: AT5G19025.1 (Ribosomal protein L34e superfamily protein ) HSP 1 Score: 105.9 bits (263), Expect = 6.1e-23 Identity = 84/240 (35.00%), Postives = 118/240 (49.17%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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