CmoCh15G002760 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh15G002760
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
Descriptionsporozoite surface protein 2-like
LocationCmo_Chr15: 1325043 .. 1325612 (-)
RNA-Seq ExpressionCmoCh15G002760
SyntenyCmoCh15G002760
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CACAAAAATGGGTAGCTCTAAACCTCTGTCCATGCTTCTCCTTTCATGCTTTCTTGTTCTCTTGCTCACTTCTGGTACTCTGTTTTCTCTTATTCTTCTCGTATCTTCGACTCATCTTATTGACTTACTAATCTTTGTTCGACATTTTTGAAGCAAAAGGCGAAGAGGTGATGGGAATAGGCGTGAAAGATGCAGGCTTGTTTGCTCCGCTAAAGGTATGTAAGTGTAGAGTTTTGGTTGGATTTTGTGTCGAGTGTGTTTGATTATTATGTTGTTTTTTTTTTTTAGGTAGGAAAATCGAGAAAGTTGGTTGTTGATGTAAACGACTATCGAAGTACTGGAGCTAATATTCCTGGAGGACCTTTATTCCACGCCACTTCTCCATGAACTCGACCTCGTCATTTCATGGATGGATCGTACCTTCGCTGTTTATAACTACTATATAACTCTCTTAAGCCCCTCTCTTTACTTCTATGGAATGAGTTGAAATGTACGTTCTTAGTGTTGTTGTCTCTATGTGTCCAAATATAATAATAATCCATGCGTCTGCATGGACCTTTTAACTTTAAA

mRNA sequence

CACAAAAATGGGTAGCTCTAAACCTCTGTCCATGCTTCTCCTTTCATGCTTTCTTGTTCTCTTGCTCACTTCTGCAAAAGGCGAAGAGGTGATGGGAATAGGCGTGAAAGATGCAGGCTTGTTTGCTCCGCTAAAGGTAGGAAAATCGAGAAAGTTGGTTGTTGATGTAAACGACTATCGAAGTACTGGAGCTAATATTCCTGGAGGACCTTTATTCCACGCCACTTCTCCATGAACTCGACCTCGTCATTTCATGGATGGATCGTACCTTCGCTGTTTATAACTACTATATAACTCTCTTAAGCCCCTCTCTTTACTTCTATGGAATGAGTTGAAATGTACGTTCTTAGTGTTGTTGTCTCTATGTGTCCAAATATAATAATAATCCATGCGTCTGCATGGACCTTTTAACTTTAAA

Coding sequence (CDS)

ATGGGTAGCTCTAAACCTCTGTCCATGCTTCTCCTTTCATGCTTTCTTGTTCTCTTGCTCACTTCTGCAAAAGGCGAAGAGGTGATGGGAATAGGCGTGAAAGATGCAGGCTTGTTTGCTCCGCTAAAGGTAGGAAAATCGAGAAAGTTGGTTGTTGATGTAAACGACTATCGAAGTACTGGAGCTAATATTCCTGGAGGACCTTTATTCCACGCCACTTCTCCATGA

Protein sequence

MGSSKPLSMLLLSCFLVLLLTSAKGEEVMGIGVKDAGLFAPLKVGKSRKLVVDVNDYRSTGANIPGGPLFHATSP
Homology
BLAST of CmoCh15G002760 vs. ExPASy TrEMBL
Match: A0A6J1JX22 (uncharacterized protein LOC111489608 isoform X5 OS=Cucurbita maxima OX=3661 GN=LOC111489608 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.5e-28
Identity = 66/75 (88.00%), Postives = 70/75 (93.33%), Query Frame = 0

Query: 1  MGSSKPLSMLLLSCFLVLLLTSAKGEEVMGIGVKDAGLFAPLKVGKSRKLVVDVNDYRST 60
          MGSS+  SMLLLSC LVLLLTSAKGEEVMGIGVKDAGLFAPLKVGKSRKL++D+NDYRST
Sbjct: 1  MGSSRTPSMLLLSCILVLLLTSAKGEEVMGIGVKDAGLFAPLKVGKSRKLMIDINDYRST 60

Query: 61 GANIPGGPLFHATSP 76
          G NIPGGPLFHA SP
Sbjct: 61 GPNIPGGPLFHANSP 75

BLAST of CmoCh15G002760 vs. ExPASy TrEMBL
Match: A0A6J1JYX7 (kininogen-1a-like OS=Cucurbita maxima OX=3661 GN=LOC111489536 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 5.8e-17
Identity = 51/68 (75.00%), Postives = 55/68 (80.88%), Query Frame = 0

Query: 1  MGSSKPLSMLLLSCFLVLLLTSAKGEEVMGIGVKDAGLFAPLKVGKSRKLVVDVNDYRST 60
          M SS PLS+LLLSCFLVLLL+ A GEE MGIGVKDAGLF  LK  KSRK+ +DV DYR T
Sbjct: 1  MSSSTPLSVLLLSCFLVLLLSPAYGEEAMGIGVKDAGLFGSLKDEKSRKM-IDVTDYRRT 60

Query: 61 GANIPGGP 69
          G NIPGGP
Sbjct: 61 GPNIPGGP 67

BLAST of CmoCh15G002760 vs. ExPASy TrEMBL
Match: A0A6J1FG76 (sporozoite surface protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111445128 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.3e-13
Identity = 47/67 (70.15%), Postives = 52/67 (77.61%), Query Frame = 0

Query: 1  MGSSKPLSMLLLSCFLVLLLTSAKGEEVMGIGVKDAGLFAPLKVGKSRKLVVDVNDYRST 60
          MGSS PLS+LLLSCFLVL+L+ A G E M IGVKDAGLF  LK  KSRK+ VDVNDY  T
Sbjct: 1  MGSSTPLSVLLLSCFLVLVLSPAYGGEAMRIGVKDAGLFGSLKDEKSRKM-VDVNDYLPT 60

Query: 61 GANIPGG 68
          G +IP G
Sbjct: 61 GPSIPEG 66

BLAST of CmoCh15G002760 vs. NCBI nr
Match: XP_022993696.1 (uncharacterized protein LOC111489608 isoform X5 [Cucurbita maxima])

HSP 1 Score: 134.0 bits (336), Expect = 5.2e-28
Identity = 66/75 (88.00%), Postives = 70/75 (93.33%), Query Frame = 0

Query: 1  MGSSKPLSMLLLSCFLVLLLTSAKGEEVMGIGVKDAGLFAPLKVGKSRKLVVDVNDYRST 60
          MGSS+  SMLLLSC LVLLLTSAKGEEVMGIGVKDAGLFAPLKVGKSRKL++D+NDYRST
Sbjct: 1  MGSSRTPSMLLLSCILVLLLTSAKGEEVMGIGVKDAGLFAPLKVGKSRKLMIDINDYRST 60

Query: 61 GANIPGGPLFHATSP 76
          G NIPGGPLFHA SP
Sbjct: 61 GPNIPGGPLFHANSP 75

BLAST of CmoCh15G002760 vs. NCBI nr
Match: KAG6578576.1 (hypothetical protein SDJN03_23024, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 129.0 bits (323), Expect = 1.7e-26
Identity = 63/67 (94.03%), Postives = 65/67 (97.01%), Query Frame = 0

Query: 9  MLLLSCFLVLLLTSAKGEEVMGIGVKDAGLFAPLKVGKSRKLVVDVNDYRSTGANIPGGP 68
          MLLLSCFLVLLLTSAKGEEVMG+GVKDAG F P+KVGKSRKLVVDVNDYRSTGANIPGGP
Sbjct: 1  MLLLSCFLVLLLTSAKGEEVMGLGVKDAGSFGPIKVGKSRKLVVDVNDYRSTGANIPGGP 60

Query: 69 LFHATSP 76
          LFHATSP
Sbjct: 61 LFHATSP 67

BLAST of CmoCh15G002760 vs. NCBI nr
Match: XP_022993585.1 (kininogen-1a-like [Cucurbita maxima])

HSP 1 Score: 96.3 bits (238), Expect = 1.2e-16
Identity = 51/68 (75.00%), Postives = 55/68 (80.88%), Query Frame = 0

Query: 1  MGSSKPLSMLLLSCFLVLLLTSAKGEEVMGIGVKDAGLFAPLKVGKSRKLVVDVNDYRST 60
          M SS PLS+LLLSCFLVLLL+ A GEE MGIGVKDAGLF  LK  KSRK+ +DV DYR T
Sbjct: 1  MSSSTPLSVLLLSCFLVLLLSPAYGEEAMGIGVKDAGLFGSLKDEKSRKM-IDVTDYRRT 60

Query: 61 GANIPGGP 69
          G NIPGGP
Sbjct: 61 GPNIPGGP 67

BLAST of CmoCh15G002760 vs. NCBI nr
Match: KAG6578577.1 (hypothetical protein SDJN03_23025, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 91.3 bits (225), Expect = 3.9e-15
Identity = 48/68 (70.59%), Postives = 53/68 (77.94%), Query Frame = 0

Query: 1  MGSSKPLSMLLLSCFLVLLLTSAKGEEVMGIGVKDAGLFAPLKVGKSRKLVVDVNDYRST 60
          MGSS PLS+LLLSCFLV +L+ A G E MGIGVKDAG F  LK  KSRK ++DV DYR T
Sbjct: 1  MGSSTPLSVLLLSCFLVFVLSPAYGGEAMGIGVKDAGSFGSLKDEKSRK-IIDVTDYRRT 60

Query: 61 GANIPGGP 69
          G NIPGGP
Sbjct: 61 GPNIPGGP 67

BLAST of CmoCh15G002760 vs. NCBI nr
Match: XP_023549861.1 (titin-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 89.4 bits (220), Expect = 1.5e-14
Identity = 48/68 (70.59%), Postives = 54/68 (79.41%), Query Frame = 0

Query: 1  MGSSKPLSMLLLSCFLVLLLTSAKGEEVMGIGVKDAGLFAPLKVGKSRKLVVDVNDYRST 60
          MGSS PLS+LLLSCFL+L+L+ A G + MG GVKDAGLF  LK  KSRK+ VDV DYR T
Sbjct: 1  MGSSTPLSVLLLSCFLLLVLSPAYGAKSMGKGVKDAGLFGSLKDEKSRKM-VDVTDYRPT 60

Query: 61 GANIPGGP 69
          G NIPGGP
Sbjct: 61 GPNIPGGP 67

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1JX222.5e-2888.00uncharacterized protein LOC111489608 isoform X5 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1JYX75.8e-1775.00kininogen-1a-like OS=Cucurbita maxima OX=3661 GN=LOC111489536 PE=4 SV=1[more]
A0A6J1FG762.3e-1370.15sporozoite surface protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111445128 ... [more]
Match NameE-valueIdentityDescription
XP_022993696.15.2e-2888.00uncharacterized protein LOC111489608 isoform X5 [Cucurbita maxima][more]
KAG6578576.11.7e-2694.03hypothetical protein SDJN03_23024, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022993585.11.2e-1675.00kininogen-1a-like [Cucurbita maxima][more]
KAG6578577.13.9e-1570.59hypothetical protein SDJN03_23025, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023549861.11.5e-1470.59titin-like [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh15G002760.1CmoCh15G002760.1mRNA