CmoCh15G000960 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh15G000960
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Prohibitin
Location	Cmo_Chr15: 476245 .. 477582 (-)
RNA-Seq Expression	CmoCh15G000960
Synteny	CmoCh15G000960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGAATAGCTTCTTCTCAAGAACGACTCACCTGCTTACCAAGGTTGCTGGCTTTGCTGTTGGTGTCGGCGTGGTATCCTCGGTTGTCAATGCCTCTATGTACACCGTCCGCATGGGTGAACGAGCAGTCATCTTCCATCCATTTGGAGGTCGTACAGACAACACCATCGTCGGTGAAGGAACTCATTTCTGCATTCCATGGCTTCAAAAGCCCTCTATATTCAATATTCGTGTTCGACCTTACACTTTCAGTTTTGTTTCCTATACTAAGGATCGTCAAGAGGTGACTTTGACGGTGCGTGTTCTCTTTCATCCTGATATCCCTTACCTCCCACATAATCATCAAACTCTCCCTTCTATTAACCATAAGGATCTGGATGCTGTGGTCTCCAAATTCACCTCTCATGAGCTTGTGGCTAACTTGATGGATGTCTCCGCTCTTATCCGTGAGGCACTGGCTGCCAGGGCTACAGAATCACATATTGTCTTAGATTACGTATCCTTCACTAATGTCTCCTTTAGTCCAGAATTTTCCAGGGCTTGCGAGTCCGAGATTGACGCAACATTCAGAGATGACGCAACATTCAGAGATTGACGCAAACGTACTTGACCCTCTCACTTCAAGATATAGCAAATACTGTTAAACTCAACAGTCCTAAGGAAGCTGAAATGCATGTGCTACAAATGGTAACTTCAGAATCGCAGGATTATTCTATTAATCAGCATCCATCTCTAGTAATATCAGTTTTTGGTACAATTTTAGATCCAGGACGGTGAGATTTTTGCAACGATTAATCAGAAGGATGGAATGATTCATACTGTTTTCTTTAAATATATGGTCATCTGTACCAATTTCAAAGACCAATCCAGCTCAATTGTTCCGACTATTTCAAGATTTATCTCTTCTTGCAACCAGGAGCAGATTCTTTTAGCGCCTGAAAAATGTAAAGTTGTCTATGAGTTATTACTGTCATCCCTGCCCAAGCACTAACATCAGGTCTAACATCAGCTCTGACATCAGGTCGATGAGGAGTACTTAAAGGAGTACTTACTGTAACCGTAATCACCCGTTGGAGTGAGCATCCCTTCTCGGACGGCCTCTTTAGGCGTTGCACCGCCAACCCGCCTAAACACTATCCCGGTCTTCCTCCATCCCTTGCCTCTGTTGTCAGTGGGTGAAGATGTGAAGACCGCTACTGTGTGCCGAAAATTGTGTTTGGTTGAAAGGAGTTTGAACTTCCTCTTCTTCTGTTTTATAAAAGGTGTAGTGAGAAACACAAACTGCCTCTTCTTCTTCTGTTCTATAAATAAGTTCTATATAAATTCTAAACAACAA

mRNA sequence

ATGATGAATAGCTTCTTCTCAAGAACGACTCACCTGCTTACCAAGGTTGCTGGCTTTGCTGTTGGTGTCGGCGTGGTATCCTCGGTTGTCAATGCCTCTATGTACACCGTCCGCATGGGTGAACGAGCAGTCATCTTCCATCCATTTGGAGGTCGTACAGACAACACCATCGTCGGTGAAGGAACTCATTTCTGCATTCCATGGCTTCAAAAGCCCTCTATATTCAATATTCGTGTTCGACCTTACACTTTCAGTTTTGTTTCCTATACTAAGGATCGTCAAGAGGTGACTTTGACGGTGCGTGTTCTCTTTCATCCTGATATCCCTTACCTCCCACATAATCATCAAACTCTCCCTTCTATTAACCATAAGGATCTGGATGCTGTGGTCTCCAAATTCACCTCTCATGAGCTTGTGGCTAACTTGATGGATGTCTCCGCTCTTATCCGTGAGGCACTGGCTGCCAGGGCTACAGAATCACATATTGTCTTAGATTACAGATTGACGCAAACGTACTTGACCCTCTCACTTCAAGATATAGCAAATACTGTTAAACTCAACAGTCCTAAGGAAGCTGAAATGCATGTGCTACAAATGGTAACTTCAGAATCGCAGGATTATTCTATTAATCAGCATCCATCTCTAATCCAGGACGGTGAGATTTTTGCAACGATTAATCAGAAGGATGGAATGATTCATACTGTTTTCTTTAAATATATGGTCATCTGTACCAATTTCAAAGACCAATCCAGCTCAATTGTTCCGACTATTTCAAGATTTATCTCTTCTTGCAACCAGGAGCAGATTCTTTTAGCGCCTGAAAAATGTAAAGTTGTCTATGAGTTATTACTGTCATCCCTGCCCAAGCACTAACATCAGGTCTAACATCAGCTCTGACATCAGGTCGATGAGGAGTACTTAAAGGAGTACTTACTGTAACCGTAATCACCCGTTGGAGTGAGCATCCCTTCTCGGACGGCCTCTTTAGGCGTTGCACCGCCAACCCGCCTAAACACTATCCCGGTCTTCCTCCATCCCTTGCCTCTGTTGTCAGTGGGTGAAGATGTGAAGACCGCTACTGTGTGCCGAAAATTGTGTTTGGTTGAAAGGAGTTTGAACTTCCTCTTCTTCTGTTTTATAAAAGGTGTAGTGAGAAACACAAACTGCCTCTTCTTCTTCTGTTCTATAAATAAGTTCTATATAAATTCTAAACAACAA

Coding sequence (CDS)

ATGATGAATAGCTTCTTCTCAAGAACGACTCACCTGCTTACCAAGGTTGCTGGCTTTGCTGTTGGTGTCGGCGTGGTATCCTCGGTTGTCAATGCCTCTATGTACACCGTCCGCATGGGTGAACGAGCAGTCATCTTCCATCCATTTGGAGGTCGTACAGACAACACCATCGTCGGTGAAGGAACTCATTTCTGCATTCCATGGCTTCAAAAGCCCTCTATATTCAATATTCGTGTTCGACCTTACACTTTCAGTTTTGTTTCCTATACTAAGGATCGTCAAGAGGTGACTTTGACGGTGCGTGTTCTCTTTCATCCTGATATCCCTTACCTCCCACATAATCATCAAACTCTCCCTTCTATTAACCATAAGGATCTGGATGCTGTGGTCTCCAAATTCACCTCTCATGAGCTTGTGGCTAACTTGATGGATGTCTCCGCTCTTATCCGTGAGGCACTGGCTGCCAGGGCTACAGAATCACATATTGTCTTAGATTACAGATTGACGCAAACGTACTTGACCCTCTCACTTCAAGATATAGCAAATACTGTTAAACTCAACAGTCCTAAGGAAGCTGAAATGCATGTGCTACAAATGGTAACTTCAGAATCGCAGGATTATTCTATTAATCAGCATCCATCTCTAATCCAGGACGGTGAGATTTTTGCAACGATTAATCAGAAGGATGGAATGATTCATACTGTTTTCTTTAAATATATGGTCATCTGTACCAATTTCAAAGACCAATCCAGCTCAATTGTTCCGACTATTTCAAGATTTATCTCTTCTTGCAACCAGGAGCAGATTCTTTTAGCGCCTGAAAAATGTAAAGTTGTCTATGAGTTATTACTGTCATCCCTGCCCAAGCACTAA

Protein sequence

MMNSFFSRTTHLLTKVAGFAVGVGVVSSVVNASMYTVRMGERAVIFHPFGGRTDNTIVGEGTHFCIPWLQKPSIFNIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLPHNHQTLPSINHKDLDAVVSKFTSHELVANLMDVSALIREALAARATESHIVLDYRLTQTYLTLSLQDIANTVKLNSPKEAEMHVLQMVTSESQDYSINQHPSLIQDGEIFATINQKDGMIHTVFFKYMVICTNFKDQSSSIVPTISRFISSCNQEQILLAPEKCKVVYELLLSSLPKH

Homology

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BLAST of CmoCh15G000960 vs. ExPASy Swiss-Prot
Match: Q9LK25 (Prohibitin-4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PHB4 PE=1 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 4.8e-32
Identity = 81/162 (50.00%), Postives = 107/162 (66.05%), Query Frame = 0


Query: 13  LTKVAGFAVGVGVVSSVVNASMYTVRMGERAVIFHPFGGRTDNTIVGEGTHFCIPWLQKP 72
           LT +A  A G+GV ++ +N+S+YTV  GERAV+F  F G  D T VGEGTHF IP+LQ P
Sbjct: 11  LTNLAKAAFGLGVAATALNSSLYTVDGGERAVLFDRFRGVLDQT-VGEGTHFLIPYLQTP 70

Query: 73  SIFNIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLPHNHQT---------LPSINH 132
            I++IR +P+TFS  S TKD Q V LT+RVLF P++  LP+  QT         LPSI +
Sbjct: 71  HIYDIRTKPHTFSSKSGTKDLQMVNLTLRVLFRPEVSRLPYIFQTLGLEYDEKVLPSIGN 130

Query: 133 KDLDAVVSKFTSHELVANLMDVSALIREALAARATESHIVLD 166
           + L AVV+ F + +L+     VSAL+R+AL  RA E +I LD
Sbjct: 131 EVLKAVVANFNADQLLTERPQVSALVRDALIKRAREFNIELD 171

[Close]

BLAST of CmoCh15G000960 vs. ExPASy Swiss-Prot
Match: O04331 (Prohibitin-3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PHB3 PE=1 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.8e-31
Identity = 80/162 (49.38%), Postives = 108/162 (66.67%), Query Frame = 0


Query: 13  LTKVAGFAVGVGVVSSVVNASMYTVRMGERAVIFHPFGGRTDNTIVGEGTHFCIPWLQKP 72
           L+ +A  A G+G  ++V+N S++TV  GERAVIF  F G  D T VGEGTHF IP LQ+P
Sbjct: 11  LSNLAKAAFGLGTAATVLNTSLFTVDGGERAVIFDRFRGVMDQT-VGEGTHFLIPILQRP 70

Query: 73  SIFNIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLPHNHQT---------LPSINH 132
            IF+IR +P+TFS +S TKD Q V LT+RVL  P++  LP+  QT         LPSI +
Sbjct: 71  HIFDIRTKPHTFSSISGTKDLQMVNLTLRVLSRPEVSRLPYIFQTLGLEYDEKVLPSIGN 130

Query: 133 KDLDAVVSKFTSHELVANLMDVSALIREALAARATESHIVLD 166
           + L AVV++F + +L+     VSAL+RE+L  RA + +IVLD
Sbjct: 131 EVLKAVVAQFNADQLLTERPHVSALVRESLITRAKDFNIVLD 171

[Close]

BLAST of CmoCh15G000960 vs. ExPASy Swiss-Prot
Match: Q54GI9 (Prohibitin-1, mitochondrial OS=Dictyostelium discoideum OX=44689 GN=phbA PE=3 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 5.2e-26
Identity = 80/204 (39.22%), Postives = 122/204 (59.80%), Query Frame = 0


Query: 13  LTKVAGFAVGVGVVSSVVNASMYTVRMGERAVIFHPFGGRTDNTIVGEGTHFCIPWLQKP 72
           L K+   A+ VG   S+  +SMYTV  G+RAVIF    G  + + VGEGTHF +PWLQKP
Sbjct: 5   LNKLIPLALTVGTGLSLAQSSMYTVDGGQRAVIFDRISGVKEKS-VGEGTHFIMPWLQKP 64

Query: 73  SIFNIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLP---------HNHQTLPSINH 132
            IF+IR  P      + +KD Q V++TVRVLF PD+ +LP         ++ + LPS+ +
Sbjct: 65  IIFDIRSSPRNIKSDTGSKDLQTVSVTVRVLFRPDVEHLPSIFSKLGLDYDERILPSLGN 124

Query: 133 KDLDAVVSKFTSHELVANLMDVSALIREALAARATESHIVLDYRLTQTYLTLSLQDIANT 192
           + L +VV+++ + EL+     VS  IRE+L  RA E +++LD  ++ T+L+ S QD  N 
Sbjct: 125 EVLKSVVAQYDATELITQREVVSKEIRESLMKRAKEFNLLLD-DVSITHLSFS-QDFTNA 184

Query: 193 V--KLNSPKEAEMHVLQMVTSESQ 206
           +  K  + +EAE     ++ +E +
Sbjct: 185 IEHKQVAQQEAERSKYIVMKNEQE 205

[Close]

BLAST of CmoCh15G000960 vs. ExPASy Swiss-Prot
Match: Q9LY99 (Prohibitin-5, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PHB5 PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.3e-24
Identity = 68/152 (44.74%), Postives = 91/152 (59.87%), Query Frame = 0


Query: 14  TKVAGFAVGVGVVSSVVNASMYTVRMGERAVIFHPFGGRTDNTIVGEGTHFCIPWLQKPS 73
           +K    A+G+G   + V ++M+TV  G+RAV+FH F G  +   VGEGTH  IPW+QKP 
Sbjct: 4   SKFTKVALGLGAAIAAVRSTMFTVDGGQRAVMFHRFEGILEEP-VGEGTHRKIPWVQKPY 63

Query: 74  IFNIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLPHNHQTLPSINHKDLDAVVSKF 133
           IF+IR +PY  +  S TKD Q V LT+RV+F PD+                 + AVV++F
Sbjct: 64  IFDIRTKPYKINTDSGTKDLQMVNLTLRVMFRPDV-----------------VKAVVAQF 123

Query: 134 TSHELVANLMDVSALIREALAARATESHIVLD 166
            + EL+     VSALIRE L  RA E +IVLD
Sbjct: 124 NADELLTERPQVSALIRETLIKRAKEFNIVLD 137

[Close]

BLAST of CmoCh15G000960 vs. ExPASy Swiss-Prot
Match: P84173 (Prohibitin OS=Gallus gallus OX=9031 GN=PHB PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.3e-24
Identity = 70/199 (35.18%), Postives = 110/199 (55.28%), Query Frame = 0


Query: 16  VAGFAVGVGVVSSVVNASMYTVRMGERAVIFHPFGGRTDNTIVGEGTHFCIPWLQKPSIF 75
           +  F +G+ V   VVN+++Y V  G RAVIF  F G  D T+VGEGTHF IPW+QKP IF
Sbjct: 9   IGKFGLGLAVAGGVVNSALYNVDAGHRAVIFDRFRGVQD-TVVGEGTHFLIPWVQKPIIF 68

Query: 76  NIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLP---------HNHQTLPSINHKDL 135
           + R RP     ++ +KD Q V +T+R+LF P    LP         ++ + LPSI  + L
Sbjct: 69  DCRSRPRNIPVITGSKDLQNVNITLRILFRPVTAQLPRIFTSIGEDYDERVLPSITTEIL 128

Query: 136 DAVVSKFTSHELVANLMDVSALIREALAARATESHIVLDYRLTQTYLTLSLQDIANTVKL 195
            +VV++F + EL+     VS  + E L  RA    ++LD  ++ T+LT   ++    V++
Sbjct: 129 KSVVARFDAGELITQRELVSRQVSEDLTERAATFGLILD-DVSLTHLTFG-KEFTEAVEM 188

Query: 196 NSPKEAEMHVLQMVTSESQ 206
               + E    + +  +++
Sbjct: 189 KQVAQQEAERARFIVEKAE 204

[Close]

BLAST of CmoCh15G000960 vs. ExPASy TrEMBL
Match: A0A6J1FJK0 (Prohibitin OS=Cucurbita moschata OX=3662 GN=LOC111444828 PE=3 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 3.8e-88
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 1   MMNSFFSRTTHLLTKVAGFAVGVGVVSSVVNASMYTVRMGERAVIFHPFGGRTDNTIVGE 60
           MMNSFFSRTTHLLTKVAGFAVGVGVVSSVVNASMYTVRMGERAVIFHPFGGRTDNTIVGE
Sbjct: 1   MMNSFFSRTTHLLTKVAGFAVGVGVVSSVVNASMYTVRMGERAVIFHPFGGRTDNTIVGE 60

Query: 61  GTHFCIPWLQKPSIFNIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLPHNHQTLPS 120
           GTHFCIPWLQKPSIFNIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLPHNHQTLPS
Sbjct: 61  GTHFCIPWLQKPSIFNIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLPHNHQTLPS 120

Query: 121 INHKDLDAVVSKFTSHELVANLMDVSALIREALAARATESHIVLDY 167
           INHKDLDAVVSKFTSHELVANLMDVSALIREALAARATESHIVLDY
Sbjct: 121 INHKDLDAVVSKFTSHELVANLMDVSALIREALAARATESHIVLDY 166

[Close]

BLAST of CmoCh15G000960 vs. ExPASy TrEMBL
Match: A0A6J1FES9 (Prohibitin OS=Cucurbita moschata OX=3662 GN=LOC111444832 PE=3 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 3.8e-88
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 1   MMNSFFSRTTHLLTKVAGFAVGVGVVSSVVNASMYTVRMGERAVIFHPFGGRTDNTIVGE 60
           MMNSFFSRTTHLLTKVAGFAVGVGVVSSVVNASMYTVRMGERAVIFHPFGGRTDNTIVGE
Sbjct: 1   MMNSFFSRTTHLLTKVAGFAVGVGVVSSVVNASMYTVRMGERAVIFHPFGGRTDNTIVGE 60

Query: 61  GTHFCIPWLQKPSIFNIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLPHNHQTLPS 120
           GTHFCIPWLQKPSIFNIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLPHNHQTLPS
Sbjct: 61  GTHFCIPWLQKPSIFNIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLPHNHQTLPS 120

Query: 121 INHKDLDAVVSKFTSHELVANLMDVSALIREALAARATESHIVLDY 167
           INHKDLDAVVSKFTSHELVANLMDVSALIREALAARATESHIVLDY
Sbjct: 121 INHKDLDAVVSKFTSHELVANLMDVSALIREALAARATESHIVLDY 166

[Close]

BLAST of CmoCh15G000960 vs. ExPASy TrEMBL
Match: A0A6J1JU21 (Prohibitin OS=Cucurbita maxima OX=3661 GN=LOC111488908 PE=3 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 3.9e-85
Identity = 162/165 (98.18%), Postives = 162/165 (98.18%), Query Frame = 0


Query: 2   MNSFFSRTTHLLTKVAGFAVGVGVVSSVVNASMYTVRMGERAVIFHPFGGRTDNTIVGEG 61
           MNSFFSRTTH LTKVAGFAVGVGVVSSVVNASMYTVRMGERAVIFHPFGGRTDNTIVGEG
Sbjct: 91  MNSFFSRTTHPLTKVAGFAVGVGVVSSVVNASMYTVRMGERAVIFHPFGGRTDNTIVGEG 150

Query: 62  THFCIPWLQKPSIFNIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLPHNHQTLPSI 121
           THFCIPWLQKPSIFNIRVRPYTFSFVS TKDRQEV LTVRVLFHPDIPYLPHNHQTLPSI
Sbjct: 151 THFCIPWLQKPSIFNIRVRPYTFSFVSNTKDRQEVNLTVRVLFHPDIPYLPHNHQTLPSI 210

Query: 122 NHKDLDAVVSKFTSHELVANLMDVSALIREALAARATESHIVLDY 167
           NHKDLDAVVSKFTSHELVANLMDVSALIREALAARATESHIVLDY
Sbjct: 211 NHKDLDAVVSKFTSHELVANLMDVSALIREALAARATESHIVLDY 255

[Close]

BLAST of CmoCh15G000960 vs. ExPASy TrEMBL
Match: A0A2I0B0X6 (Prohibitin OS=Apostasia shenzhenica OX=1088818 GN=PHB3 PE=3 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 3.5e-33
Identity = 96/203 (47.29%), Postives = 130/203 (64.04%), Query Frame = 0


Query: 13  LTKVAGFAVGVGVVSSVVNASMYTVRMGERAVIFHPFGGRTDNTIVGEGTHFCIPWLQKP 72
           LT VA  AVG+GV +SV++AS+YTV  GERAV+F  F G  D TI GEGTHF IPWLQKP
Sbjct: 12  LTNVARAAVGLGVSASVLSASLYTVDGGERAVLFDRFRGVLDETI-GEGTHFLIPWLQKP 71

Query: 73  SIFNIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLP---------HNHQTLPSINH 132
            IF+IR RP+TF+  S TKD Q V LT+R+L  PD+P LP         ++ + LPSI +
Sbjct: 72  YIFDIRTRPHTFTSNSGTKDLQMVNLTLRLLSRPDVPMLPTIFKSLGTEYDEKVLPSIGN 131

Query: 133 KDLDAVVSKFTSHELVANLMDVSALIREALAARATESHIVLDYRLTQTYLTLSLQ-DIAN 192
           + L AVV++F + +L+     VSAL+R+AL  RA + HIVLD  +  T+L+   +  IA 
Sbjct: 132 EVLKAVVAQFNADQLLTERPHVSALVRDALIRRARDFHIVLD-DVAITHLSYGTEFSIAV 191

Query: 193 TVKLNSPKEAEMHVLQMVTSESQ 206
             K  + +EAE     +  +E +
Sbjct: 192 EKKQVAQQEAERSKFLVARAEQE 212

[Close]

BLAST of CmoCh15G000960 vs. ExPASy TrEMBL
Match: A0A2G2VEA8 (Prohibitin OS=Capsicum baccatum OX=33114 GN=CQW23_27615 PE=3 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 1.7e-32
Identity = 83/168 (49.40%), Postives = 114/168 (67.86%), Query Frame = 0


Query: 7   SRTTHLLTKVAGFAVGVGVVSSVVNASMYTVRMGERAVIFHPFGGRTDNTIVGEGTHFCI 66
           ++    LT +A  AVG+G+ +S++N+S+YTV  GERAV+F  F G  D+TI GEGTHF I
Sbjct: 4   NQAVSFLTNIARAAVGLGISASILNSSLYTVDGGERAVLFDRFSGVKDDTI-GEGTHFLI 63

Query: 67  PWLQKPSIFNIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLP---------HNHQT 126
           PWLQKP IF+IR RP+TFS VS TKD Q V LT+RVL  P++  LP         ++ + 
Sbjct: 64  PWLQKPFIFDIRTRPHTFSSVSGTKDLQMVHLTLRVLSRPEVMRLPYIFKTLGLEYDEKV 123

Query: 127 LPSINHKDLDAVVSKFTSHELVANLMDVSALIREALAARATESHIVLD 166
           LPSI ++ L AVV++F + +L+     VSA +RE+L  RA + +IVLD
Sbjct: 124 LPSIGNEVLKAVVAQFNADQLLTERPQVSAFVRESLIRRAKDFNIVLD 170

[Close]

BLAST of CmoCh15G000960 vs. NCBI nr
Match: KAG6578396.1 (Prohibitin-4, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 334.7 bits (857), Expect = 7.8e-88
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 1   MMNSFFSRTTHLLTKVAGFAVGVGVVSSVVNASMYTVRMGERAVIFHPFGGRTDNTIVGE 60
           MMNSFFSRTTHLLTKVAGFAVGVGVVSSVVNASMYTVRMGERAVIFHPFGGRTDNTIVGE
Sbjct: 1   MMNSFFSRTTHLLTKVAGFAVGVGVVSSVVNASMYTVRMGERAVIFHPFGGRTDNTIVGE 60

Query: 61  GTHFCIPWLQKPSIFNIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLPHNHQTLPS 120
           GTHFCIPWLQKPSIFNIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLPHNHQTLPS
Sbjct: 61  GTHFCIPWLQKPSIFNIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLPHNHQTLPS 120

Query: 121 INHKDLDAVVSKFTSHELVANLMDVSALIREALAARATESHIVLDY 167
           INHKDLDAVVSKFTSHELVANLMDVSALIREALAARATESHIVLDY
Sbjct: 121 INHKDLDAVVSKFTSHELVANLMDVSALIREALAARATESHIVLDY 166

[Close]

BLAST of CmoCh15G000960 vs. NCBI nr
Match: XP_022938672.1 (prohibitin-4, mitochondrial-like [Cucurbita moschata] >XP_022938673.1 prohibitin-4, mitochondrial-like [Cucurbita moschata] >KAG6578388.1 Prohibitin-4, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 334.7 bits (857), Expect = 7.8e-88
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 1   MMNSFFSRTTHLLTKVAGFAVGVGVVSSVVNASMYTVRMGERAVIFHPFGGRTDNTIVGE 60
           MMNSFFSRTTHLLTKVAGFAVGVGVVSSVVNASMYTVRMGERAVIFHPFGGRTDNTIVGE
Sbjct: 1   MMNSFFSRTTHLLTKVAGFAVGVGVVSSVVNASMYTVRMGERAVIFHPFGGRTDNTIVGE 60

Query: 61  GTHFCIPWLQKPSIFNIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLPHNHQTLPS 120
           GTHFCIPWLQKPSIFNIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLPHNHQTLPS
Sbjct: 61  GTHFCIPWLQKPSIFNIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLPHNHQTLPS 120

Query: 121 INHKDLDAVVSKFTSHELVANLMDVSALIREALAARATESHIVLDY 167
           INHKDLDAVVSKFTSHELVANLMDVSALIREALAARATESHIVLDY
Sbjct: 121 INHKDLDAVVSKFTSHELVANLMDVSALIREALAARATESHIVLDY 166

[Close]

BLAST of CmoCh15G000960 vs. NCBI nr
Match: KAG6578402.1 (Prohibitin-4, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 334.7 bits (857), Expect = 7.8e-88
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 1   MMNSFFSRTTHLLTKVAGFAVGVGVVSSVVNASMYTVRMGERAVIFHPFGGRTDNTIVGE 60
           MMNSFFSRTTHLLTKVAGFAVGVGVVSSVVNASMYTVRMGERAVIFHPFGGRTDNTIVGE
Sbjct: 1   MMNSFFSRTTHLLTKVAGFAVGVGVVSSVVNASMYTVRMGERAVIFHPFGGRTDNTIVGE 60

Query: 61  GTHFCIPWLQKPSIFNIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLPHNHQTLPS 120
           GTHFCIPWLQKPSIFNIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLPHNHQTLPS
Sbjct: 61  GTHFCIPWLQKPSIFNIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLPHNHQTLPS 120

Query: 121 INHKDLDAVVSKFTSHELVANLMDVSALIREALAARATESHIVLDY 167
           INHKDLDAVVSKFTSHELVANLMDVSALIREALAARATESHIVLDY
Sbjct: 121 INHKDLDAVVSKFTSHELVANLMDVSALIREALAARATESHIVLDY 166

[Close]

BLAST of CmoCh15G000960 vs. NCBI nr
Match: XP_022938678.1 (prohibitin-4, mitochondrial-like isoform X1 [Cucurbita moschata] >XP_022938679.1 prohibitin-4, mitochondrial-like isoform X2 [Cucurbita moschata] >XP_022938680.1 prohibitin-4, mitochondrial-like isoform X2 [Cucurbita moschata] >KAG6578386.1 Prohibitin-4, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 334.7 bits (857), Expect = 7.8e-88
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 1   MMNSFFSRTTHLLTKVAGFAVGVGVVSSVVNASMYTVRMGERAVIFHPFGGRTDNTIVGE 60
           MMNSFFSRTTHLLTKVAGFAVGVGVVSSVVNASMYTVRMGERAVIFHPFGGRTDNTIVGE
Sbjct: 1   MMNSFFSRTTHLLTKVAGFAVGVGVVSSVVNASMYTVRMGERAVIFHPFGGRTDNTIVGE 60

Query: 61  GTHFCIPWLQKPSIFNIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLPHNHQTLPS 120
           GTHFCIPWLQKPSIFNIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLPHNHQTLPS
Sbjct: 61  GTHFCIPWLQKPSIFNIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLPHNHQTLPS 120

Query: 121 INHKDLDAVVSKFTSHELVANLMDVSALIREALAARATESHIVLDY 167
           INHKDLDAVVSKFTSHELVANLMDVSALIREALAARATESHIVLDY
Sbjct: 121 INHKDLDAVVSKFTSHELVANLMDVSALIREALAARATESHIVLDY 166

[Close]

BLAST of CmoCh15G000960 vs. NCBI nr
Match: KAG6578377.1 (Prohibitin-4, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 333.2 bits (853), Expect = 2.3e-87
Identity = 165/166 (99.40%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 1   MMNSFFSRTTHLLTKVAGFAVGVGVVSSVVNASMYTVRMGERAVIFHPFGGRTDNTIVGE 60
           MMNSFFSRTTHLLTKVAGFAVGVGVVSSVVNASMYTVR+GERAVIFHPFGGRTDNTIVGE
Sbjct: 1   MMNSFFSRTTHLLTKVAGFAVGVGVVSSVVNASMYTVRIGERAVIFHPFGGRTDNTIVGE 60

Query: 61  GTHFCIPWLQKPSIFNIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLPHNHQTLPS 120
           GTHFCIPWLQKPSIFNIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLPHNHQTLPS
Sbjct: 61  GTHFCIPWLQKPSIFNIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLPHNHQTLPS 120

Query: 121 INHKDLDAVVSKFTSHELVANLMDVSALIREALAARATESHIVLDY 167
           INHKDLDAVVSKFTSHELVANLMDVSALIREALAARATESHIVLDY
Sbjct: 121 INHKDLDAVVSKFTSHELVANLMDVSALIREALAARATESHIVLDY 166

[Close]

BLAST of CmoCh15G000960 vs. TAIR 10
Match: AT3G27280.2 (prohibitin 4 )

HSP 1 Score: 139.8 bits (351), Expect = 3.4e-33
Identity = 81/162 (50.00%), Postives = 107/162 (66.05%), Query Frame = 0


Query: 13  LTKVAGFAVGVGVVSSVVNASMYTVRMGERAVIFHPFGGRTDNTIVGEGTHFCIPWLQKP 72
           LT +A  A G+GV ++ +N+S+YTV  GERAV+F  F G  D T VGEGTHF IP+LQ P
Sbjct: 11  LTNLAKAAFGLGVAATALNSSLYTVDGGERAVLFDRFRGVLDQT-VGEGTHFLIPYLQTP 70

Query: 73  SIFNIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLPHNHQT---------LPSINH 132
            I++IR +P+TFS  S TKD Q V LT+RVLF P++  LP+  QT         LPSI +
Sbjct: 71  HIYDIRTKPHTFSSKSGTKDLQMVNLTLRVLFRPEVSRLPYIFQTLGLEYDEKVLPSIGN 130

Query: 133 KDLDAVVSKFTSHELVANLMDVSALIREALAARATESHIVLD 166
           + L AVV+ F + +L+     VSAL+R+AL  RA E +I LD
Sbjct: 131 EVLKAVVANFNADQLLTERPQVSALVRDALIKRAREFNIELD 171

[Close]

BLAST of CmoCh15G000960 vs. TAIR 10
Match: AT3G27280.1 (prohibitin 4 )

HSP 1 Score: 139.8 bits (351), Expect = 3.4e-33
Identity = 81/162 (50.00%), Postives = 107/162 (66.05%), Query Frame = 0


Query: 13  LTKVAGFAVGVGVVSSVVNASMYTVRMGERAVIFHPFGGRTDNTIVGEGTHFCIPWLQKP 72
           LT +A  A G+GV ++ +N+S+YTV  GERAV+F  F G  D T VGEGTHF IP+LQ P
Sbjct: 11  LTNLAKAAFGLGVAATALNSSLYTVDGGERAVLFDRFRGVLDQT-VGEGTHFLIPYLQTP 70

Query: 73  SIFNIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLPHNHQT---------LPSINH 132
            I++IR +P+TFS  S TKD Q V LT+RVLF P++  LP+  QT         LPSI +
Sbjct: 71  HIYDIRTKPHTFSSKSGTKDLQMVNLTLRVLFRPEVSRLPYIFQTLGLEYDEKVLPSIGN 130

Query: 133 KDLDAVVSKFTSHELVANLMDVSALIREALAARATESHIVLD 166
           + L AVV+ F + +L+     VSAL+R+AL  RA E +I LD
Sbjct: 131 EVLKAVVANFNADQLLTERPQVSALVRDALIKRAREFNIELD 171

[Close]

BLAST of CmoCh15G000960 vs. TAIR 10
Match: AT5G40770.1 (prohibitin 3 )

HSP 1 Score: 137.9 bits (346), Expect = 1.3e-32
Identity = 80/162 (49.38%), Postives = 108/162 (66.67%), Query Frame = 0


Query: 13  LTKVAGFAVGVGVVSSVVNASMYTVRMGERAVIFHPFGGRTDNTIVGEGTHFCIPWLQKP 72
           L+ +A  A G+G  ++V+N S++TV  GERAVIF  F G  D T VGEGTHF IP LQ+P
Sbjct: 11  LSNLAKAAFGLGTAATVLNTSLFTVDGGERAVIFDRFRGVMDQT-VGEGTHFLIPILQRP 70

Query: 73  SIFNIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLPHNHQT---------LPSINH 132
            IF+IR +P+TFS +S TKD Q V LT+RVL  P++  LP+  QT         LPSI +
Sbjct: 71  HIFDIRTKPHTFSSISGTKDLQMVNLTLRVLSRPEVSRLPYIFQTLGLEYDEKVLPSIGN 130

Query: 133 KDLDAVVSKFTSHELVANLMDVSALIREALAARATESHIVLD 166
           + L AVV++F + +L+     VSAL+RE+L  RA + +IVLD
Sbjct: 131 EVLKAVVAQFNADQLLTERPHVSALVRESLITRAKDFNIVLD 171

[Close]

BLAST of CmoCh15G000960 vs. TAIR 10
Match: AT5G14300.1 (prohibitin 5 )

HSP 1 Score: 115.2 bits (287), Expect = 9.0e-26
Identity = 68/152 (44.74%), Postives = 91/152 (59.87%), Query Frame = 0


Query: 14  TKVAGFAVGVGVVSSVVNASMYTVRMGERAVIFHPFGGRTDNTIVGEGTHFCIPWLQKPS 73
           +K    A+G+G   + V ++M+TV  G+RAV+FH F G  +   VGEGTH  IPW+QKP 
Sbjct: 4   SKFTKVALGLGAAIAAVRSTMFTVDGGQRAVMFHRFEGILEEP-VGEGTHRKIPWVQKPY 63

Query: 74  IFNIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLPHNHQTLPSINHKDLDAVVSKF 133
           IF+IR +PY  +  S TKD Q V LT+RV+F PD+                 + AVV++F
Sbjct: 64  IFDIRTKPYKINTDSGTKDLQMVNLTLRVMFRPDV-----------------VKAVVAQF 123

Query: 134 TSHELVANLMDVSALIREALAARATESHIVLD 166
            + EL+     VSALIRE L  RA E +IVLD
Sbjct: 124 NADELLTERPQVSALIRETLIKRAKEFNIVLD 137

[Close]

BLAST of CmoCh15G000960 vs. TAIR 10
Match: AT2G20530.1 (prohibitin 6 )

HSP 1 Score: 92.4 bits (228), Expect = 6.3e-19
Identity = 56/162 (34.57%), Postives = 85/162 (52.47%), Query Frame = 0


Query: 22  GVGVVSSVV---------NASMYTVRMGERAVIFHPFGGRTDNTIVGEGTHFCIPWLQKP 81
           G GV+++VV           ++Y V  G RA++F+   G  D  +  EGTH  IPW ++P
Sbjct: 13  GGGVIAAVVIGGLSLYGATHTLYNVDGGHRAIVFNRLVGIKDK-VYPEGTHLMIPWFERP 72

Query: 82  SIFNIRVRPYTFSFVSYTKDRQEVTLTVRVLFHPDIPYLP---------HNHQTLPSINH 141
            I+++R +PY     S ++D Q V + +RVL  P    LP         +  + LPSI H
Sbjct: 73  IIYDVRAKPYLVESTSGSRDLQMVKIGLRVLTRPMADQLPEVYRSLGENYRERVLPSIIH 132

Query: 142 KDLDAVVSKFTSHELVANLMDVSALIREALAARATESHIVLD 166
           + L AVV+++ + +L+     VS  IR+ L  RA   HI LD
Sbjct: 133 ETLKAVVAQYNASQLITQRESVSREIRKILTLRAANFHIALD 173

The following BLAST results are available for this feature:

BLAST of CmoCh15G000960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LK25	4.8e-32	50.00	Prohibitin-4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PHB4 PE=1 SV=1	[more]
O04331	1.8e-31	49.38	Prohibitin-3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PHB3 PE=1 SV=1	[more]
Q54GI9	5.2e-26	39.22	Prohibitin-1, mitochondrial OS=Dictyostelium discoideum OX=44689 GN=phbA PE=3 SV...	[more]
Q9LY99	1.3e-24	44.74	Prohibitin-5, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PHB5 PE=1 SV=1	[more]
P84173	1.3e-24	35.18	Prohibitin OS=Gallus gallus OX=9031 GN=PHB PE=1 SV=1	[more]

BLAST of CmoCh15G000960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FJK0	3.8e-88	100.00	Prohibitin OS=Cucurbita moschata OX=3662 GN=LOC111444828 PE=3 SV=1	[more]
A0A6J1FES9	3.8e-88	100.00	Prohibitin OS=Cucurbita moschata OX=3662 GN=LOC111444832 PE=3 SV=1	[more]
A0A6J1JU21	3.9e-85	98.18	Prohibitin OS=Cucurbita maxima OX=3661 GN=LOC111488908 PE=3 SV=1	[more]
A0A2I0B0X6	3.5e-33	47.29	Prohibitin OS=Apostasia shenzhenica OX=1088818 GN=PHB3 PE=3 SV=1	[more]
A0A2G2VEA8	1.7e-32	49.40	Prohibitin OS=Capsicum baccatum OX=33114 GN=CQW23_27615 PE=3 SV=1	[more]

BLAST of CmoCh15G000960 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6578396.1	7.8e-88	100.00	Prohibitin-4, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022938672.1	7.8e-88	100.00	prohibitin-4, mitochondrial-like [Cucurbita moschata] >XP_022938673.1 prohibitin...	[more]
KAG6578402.1	7.8e-88	100.00	Prohibitin-4, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022938678.1	7.8e-88	100.00	prohibitin-4, mitochondrial-like isoform X1 [Cucurbita moschata] >XP_022938679.1...	[more]
KAG6578377.1	2.3e-87	99.40	Prohibitin-4, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CmoCh15G000960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G27280.2	3.4e-33	50.00	prohibitin 4	[more]
AT3G27280.1	3.4e-33	50.00	prohibitin 4	[more]
AT5G40770.1	1.3e-32	49.38	prohibitin 3	[more]
AT5G14300.1	9.0e-26	44.74	prohibitin 5	[more]
AT2G20530.1	6.3e-19	34.57	prohibitin 6	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001107	Band 7 domain	SMART	SM00244	PHB_4	coord: 32..192 e-value: 4.0E-4 score: 29.7
IPR001107	Band 7 domain	PFAM	PF01145	Band_7	coord: 36..174 e-value: 7.7E-11 score: 42.3
None	No IPR available	PANTHER	PTHR23222:SF17	PROHIBITIN-3, MITOCHONDRIAL-RELATED	coord: 11..166
IPR000163	Prohibitin	PANTHER	PTHR23222	PROHIBITIN	coord: 11..166
IPR000163	Prohibitin	CDD	cd03401	SPFH_prohibitin	coord: 34..165 e-value: 6.02825E-38 score: 130.711

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh15G000960.1	CmoCh15G000960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0016020	membrane