CmoCh14G021980 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCGGTGGAGAGAGACGACGCCAGCACTCCGGCGCCGGCGTCCCCAAAGGCTGCTTGGCGGTCCGAGTGGGGCAGAAGGAGGAAGAGCAGCAGAGATTTGTGGTGCCGGTTATGTACTTCAATCACCCGCGCTTCATGCAACTTCTCAAGGAGGCGGAGGAGGAGTACGGATTCGATCAGAAAGGGACCATCGCCATTCCTTGCCACGTCGAGGAGTTCCGCCACGTCCAGGGCATGATTGACCGTGAAAATTCATTCCACCGCCGTCACCACCACCACCACGTCGGTTGCTTTCGGGTTTCATTCTGA ATGGGCGGTGGAGAGAGACGACGCCAGCACTCCGGCGCCGGCGTCCCCAAAGGCTGCTTGGCGGTCCGAGTGGGGCAGAAGGAGGAAGAGCAGCAGAGATTTGTGGTGCCGGTTATGTACTTCAATCACCCGCGCTTCATGCAACTTCTCAAGGAGGCGGAGGAGGAGTACGGATTCGATCAGAAAGGGACCATCGCCATTCCTTGCCACGTCGAGGAGTTCCGCCACGTCCAGGGCATGATTGACCGTGAAAATTCATTCCACCGCCGTCACCACCACCACCACGTCGGTTGCTTTCGGGTTTCATTCTGA ATGGGCGGTGGAGAGAGACGACGCCAGCACTCCGGCGCCGGCGTCCCCAAAGGCTGCTTGGCGGTCCGAGTGGGGCAGAAGGAGGAAGAGCAGCAGAGATTTGTGGTGCCGGTTATGTACTTCAATCACCCGCGCTTCATGCAACTTCTCAAGGAGGCGGAGGAGGAGTACGGATTCGATCAGAAAGGGACCATCGCCATTCCTTGCCACGTCGAGGAGTTCCGCCACGTCCAGGGCATGATTGACCGTGAAAATTCATTCCACCGCCGTCACCACCACCACCACGTCGGTTGCTTTCGGGTTTCATTCTGA MGGGERRRQHSGAGVPKGCLAVRVGQKEEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHHHHHVGCFRVSF Homology
BLAST of CmoCh14G021980 vs. ExPASy Swiss-Prot
Match: Q9ZUZ3 (Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 5.0e-32 Identity = 67/97 (69.07%), Postives = 77/97 (79.38%), Query Frame = 0
BLAST of CmoCh14G021980 vs. ExPASy Swiss-Prot
Match: O22150 (Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana OX=3702 GN=SAUR36 PE=2 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 1.0e-13 Identity = 35/67 (52.24%), Postives = 48/67 (71.64%), Query Frame = 0
BLAST of CmoCh14G021980 vs. ExPASy Swiss-Prot
Match: Q41220 (Auxin-responsive protein SAUR15 OS=Arabidopsis thaliana OX=3702 GN=SAUR15 PE=1 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 6.3e-11 Identity = 32/80 (40.00%), Postives = 50/80 (62.50%), Query Frame = 0
BLAST of CmoCh14G021980 vs. ExPASy Swiss-Prot
Match: P33082 (Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 5.4e-10 Identity = 33/72 (45.83%), Postives = 44/72 (61.11%), Query Frame = 0
BLAST of CmoCh14G021980 vs. ExPASy Swiss-Prot
Match: P33079 (Auxin-induced protein 10A5 OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 9.2e-10 Identity = 33/64 (51.56%), Postives = 41/64 (64.06%), Query Frame = 0
BLAST of CmoCh14G021980 vs. ExPASy TrEMBL
Match: A0A6J1EEX5 (auxin-responsive protein SAUR32-like OS=Cucurbita moschata OX=3662 GN=LOC111431915 PE=3 SV=1) HSP 1 Score: 219.5 bits (558), Expect = 6.3e-54 Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0
BLAST of CmoCh14G021980 vs. ExPASy TrEMBL
Match: A0A6J1IWQ0 (auxin-responsive protein SAUR32-like OS=Cucurbita maxima OX=3661 GN=LOC111479275 PE=3 SV=1) HSP 1 Score: 205.7 bits (522), Expect = 9.4e-50 Identity = 99/104 (95.19%), Postives = 100/104 (96.15%), Query Frame = 0
BLAST of CmoCh14G021980 vs. ExPASy TrEMBL
Match: A0A5D3DBZ9 (Auxin-responsive family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00700 PE=3 SV=1) HSP 1 Score: 195.3 bits (495), Expect = 1.3e-46 Identity = 97/109 (88.99%), Postives = 100/109 (91.74%), Query Frame = 0
BLAST of CmoCh14G021980 vs. ExPASy TrEMBL
Match: A0A0A0L5S7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G118740 PE=3 SV=1) HSP 1 Score: 193.7 bits (491), Expect = 3.7e-46 Identity = 97/112 (86.61%), Postives = 99/112 (88.39%), Query Frame = 0
BLAST of CmoCh14G021980 vs. ExPASy TrEMBL
Match: A0A6J1ICI8 (auxin-responsive protein SAUR32-like OS=Cucurbita maxima OX=3661 GN=LOC111473610 PE=3 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 1.1e-42 Identity = 90/106 (84.91%), Postives = 95/106 (89.62%), Query Frame = 0
BLAST of CmoCh14G021980 vs. TAIR 10
Match: AT2G46690.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 138.3 bits (347), Expect = 3.5e-33 Identity = 67/97 (69.07%), Postives = 77/97 (79.38%), Query Frame = 0
BLAST of CmoCh14G021980 vs. TAIR 10
Match: AT4G00880.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 136.7 bits (343), Expect = 1.0e-32 Identity = 68/102 (66.67%), Postives = 78/102 (76.47%), Query Frame = 0
BLAST of CmoCh14G021980 vs. TAIR 10
Match: AT3G61900.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 129.0 bits (323), Expect = 2.2e-30 Identity = 59/78 (75.64%), Postives = 67/78 (85.90%), Query Frame = 0
BLAST of CmoCh14G021980 vs. TAIR 10
Match: AT5G53590.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 98.2 bits (243), Expect = 4.1e-21 Identity = 50/104 (48.08%), Postives = 68/104 (65.38%), Query Frame = 0
BLAST of CmoCh14G021980 vs. TAIR 10
Match: AT3G60690.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 84.7 bits (208), Expect = 4.7e-17 Identity = 38/73 (52.05%), Postives = 53/73 (72.60%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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