CmoCh14G021430 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGCCACTGCTTCCAACAATTGCTTGGCGCCTTTCTGTCCACGCCACGAATCCCTTTCCATGAAATGAAATTTGCTTGCAGCTTACAATTTCCCACAAATCAATGAAATCATATATATATTTCTGTTTTTCTTATGTGTTTTGCAAAACCCAATTCGTCTTCCTCTTCGATTTCATTCTGATCACCAAACTATCTGTAGCCGCCTCAATTTTCTTTCACATTCATTCAAATTCGTCGACCCATCTTCCCACAATTTTTGAGCCTTCAACGGCGAAAGAGTCTTATTAGACGCGTTCTTCTTTGAAAATTTGCATTTCCCAGTTCCCGATACTTTTTGACATTGGGAAGAACGGAAATTAGTACGGTGTTCTTCAACCCAGTTGCGTAGAGGAAGATATGGTGGGCTTGAAGCCGAATTTACCCTCTTGGACGAGTTGCTCATCCACCCGGGTTGATTTTGAGGGAAACGTTTCTTCTCTATCGGATTCCATGTTCAGAGACGGCAAAGAAGGCCCCTCGGAGCAGCCGCGCCGTTCTAATACTCTCTCTGATGCCAATTTGAGCTTCGGAGAAAGATCCCTTTCCGCCGCTGCCGCCGCCGTTGTTTCTGCCATTCTCGTTAATCCCCTTGACATTGCCAAAGTATGTTAAATTTCTATGAATTTGTAATTGGGGTTTTCAGTATCGGAGATTAGGCTATGTGGGCATGTCATTTCTTGTTCTTTAGAAGACCGAGTAGTTTCAATTACTAATATCTTGACGTTCTTCCAAGTGTAGTTGCATATTTGTGAGTACCTTTAAGTCGGTTTCTTGTTTTGATTATGTTCTTCAGACAAGGTTGCAAGCACAAGCTGCTGGAGTCCCATATGAAGGGCCCTGTCGGATGACAAGTTTAGAAAGGAATACGGTGTGTGTGAATTGAATACCTTACCCTGCATTGGTTTCAATATGTTAATATGATAGGAACTCCGAGTTTTTTGGATAATTTTACAATGAGCTGGAAGAGATTAGGACCTTATGCCAATTGTTGTCTCACATTGAATAATGAAAAGACTCTCAATGAACTTTTTCTTGGTTGCTCCTCAGGTGATTCCTAATTTGAGATGTTCATCAGTATCCAGCTCACGTTCTCTCGTTGGCCTCGAACCTAATTGTTCGTTAGAGTGTAACCGGTATACAGGAGCGTTTGATGTGTTCAACAAGGTTATTCGTCAGGTTAGTCGAGGATCTTGAGACTAATACTAGTTAAGATCATCCATATGTTTCATAGATGCATTGTAGCTTTTGTAGTTTCAGTGAAATGTAGTATTTAATGAAAGGATCGAGCTGCGAATAAATATGTTAGTAAAGTTAGATGGTCTCTATGGTGATCAATAGTCTTCTACCTTTACTTATCCTGATCCCTGCACAGCTTGCTAGTGTATTTGACATGGCACTTTGTTGTTAAGGGTGGGTCGATTAGTATGCTAAGAACCGAACGATTTGCAGGAAGGCTTTGGGAGGCTGTGGCGAGGCACATATGCAAGCTTAACTCTGGCTGTGCCAACCGTGAGTATTTATTTTTAGCTGAGATGTATGACCAAGGATTACATTGTTTATGATTTTTTGCTTCCTGCTGCCTTCCAGGTGGGGATCTACATGCCTTGTTATGATATCTTCCGCAATTTCATGGAAGATTTTACTACCAAGAACGCTCCGAACTTGACTCCATATGTTCCGTTAGTTGCAGGATCAGCTGCCCGCTCATTAGCTGTTATATCATGTTACCCTGTTGAACTTGCACGGACGCGAATGCAGGTTTAGGATTATGCATATTGATCTTTATTTCGGGTTTATTTACGACGATATGCTACAAGCCTATATCATAGCTCAAGCTCATAGTTCAAGTATTTTTCTTCGCTCCCTCTCCTAGGCGTTTAGGGAAAAACAAACTGGCACTAAGCCTCCAGGGGTGTGGAAGACGTTGGTTGAGGTCGTCAACCCTATTAGGGGTAATCGCCTTCAAGATTGTAAGTACTAGTTGAAGTACGATTCAGTGTCTAGTTAAGTTATGTAGAAGTTTAGTATGAAAGTATTGATTCCGTTTCCAACAGTACAGAACTATCGTTTCTTATGGACTGGCCTTGGGGCACAACTTGCTCGAGATGTCCCGTTTTCTGCCATCTGCTGGGCAGCACTTGAGCCTGTGAGAAATTTTCTGTCAAGTTGTTTGAGGAAGGCACATCTTAGCTATGATAATGCCTTGCTTTGGTATGTTTGAGGATTTTGAACGTCTTTCCTGTCCACCTTGTTTTGCAGTCAAGGAGGAAAATTCTAAGCCTAGTTGGAGAGGACGCCAATGTATCAAGTGTGCTTGGTGCAAATTTCTCTGCTGGCTTCATTGCTGGAAGTCTTGCAGCTGCTGCAACATGTCCACTGGATGTTGCTAAAACCCGAAGGCAAATCGAGGTTTCTTTCCCAATTATTTTTCTAATTTTAGGCTTCCGATCCCACACCTTTTGTCGAAGGTTTGCTTTCGTTTTACGCTAAAGTTCATCGGAGATTGATTTCACAGCTCCCTTGTTGAGCTGAAGTTCACAGTCAGTCCCAATGGGTCCAAACCCAGCTGACATATAAAATTGAAACCTTCACAGCATCTGATTGAGTTGTGGGACTTTGATATCTGAAACGGCTGGGAATGGTGTGAATAAAGTTCGATGCGAACACCCTTTTTTTGCTTGGAAACAACAAGCTAACCTGTATCTATATGGGTTTCTATGGCCCCCGACCCTATGAATTACGGTTGCATTTGATGTTGGGTTTCTTTTGGTATTTTGCAGAGAGATTCTGAAAAGGCATTAAAGATGACTACAAGAACAACTCTGGCAGAAATTTGGAGGTAAGTAGCAATTTTGGTTCCAAGGTTTCCATTGTCATTAGTAGTTGTTCTTGGTGTTGGCATGAGTTTCATTGTACTTTGGGCAATGAGTTGCATTATACTTTGGGCAATGAGTTGCATTATACTTTGGGCAATGAGTTGCATTATACTTTGGACAGGGATGGAGGAATCAAAGGAATGTTTACTGGAATTGGTCCCCGGGTTGGTCGTGCAGGTCCCTCTGTCGGGATAGTCGTCTCCTTCTACGAAGTTATGAAGTATGCTCTGTATCACAGACACCCAAAAGAACAAAAGAAAGGATGACTGAATAGAGGGAGTGTCACTTGGAATGTGCCGTCCCTATGTATGTAAGCTCAAGAAATCTCCTCTCCACAGATTCTTTTGGCCAAAGACCTTTGGATGGTTAAGACAGCAACTTGTAATGAAACAAAAATCTCTCCTATTGTGAGACCTCTCAAGTCCAGTTTTTCACCCAACGATTTGTTCAAACACGAGATTAGATGTACATGAACTCTTTGGTTTGATGTTTATAGTTCGATTAAGAATCTGTTTTGATAAGTTTAAAGCAGGCCATTCCAAACT TGCCACTGCTTCCAACAATTGCTTGGCGCCTTTCTGTCCACGCCACGAATCCCTTTCCATGAAATGAAATTTGCTTGCAGCTTACAATTTCCCACAAATCAATGAAATCATATATATATTTCTGTTTTTCTTATGTGTTTTGCAAAACCCAATTCGTCTTCCTCTTCGATTTCATTCTGATCACCAAACTATCTGTAGCCGCCTCAATTTTCTTTCACATTCATTCAAATTCGTCGACCCATCTTCCCACAATTTTTGAGCCTTCAACGGCGAAAGAGTCTTATTAGACGCGTTCTTCTTTGAAAATTTGCATTTCCCAGTTCCCGATACTTTTTGACATTGGGAAGAACGGAAATTAGTACGGTGTTCTTCAACCCAGTTGCGTAGAGGAAGATATGGTGGGCTTGAAGCCGAATTTACCCTCTTGGACGAGTTGCTCATCCACCCGGGTTGATTTTGAGGGAAACGTTTCTTCTCTATCGGATTCCATGTTCAGAGACGGCAAAGAAGGCCCCTCGGAGCAGCCGCGCCGTTCTAATACTCTCTCTGATGCCAATTTGAGCTTCGGAGAAAGATCCCTTTCCGCCGCTGCCGCCGCCGTTGTTTCTGCCATTCTCGTTAATCCCCTTGACATTGCCAAAACAAGGTTGCAAGCACAAGCTGCTGGAGTCCCATATGAAGGGCCCTGTCGGATGACAAGTTTAGAAAGGAATACGGTGATTCCTAATTTGAGATGTTCATCAGTATCCAGCTCACGTTCTCTCGTTGGCCTCGAACCTAATTGTTCGTTAGAGTGTAACCGGTATACAGGAGCGTTTGATGTGTTCAACAAGGTTATTCGTCAGGAAGGCTTTGGGAGGCTGTGGCGAGGCACATATGCAAGCTTAACTCTGGCTGTGCCAACCGTGGGGATCTACATGCCTTGTTATGATATCTTCCGCAATTTCATGGAAGATTTTACTACCAAGAACGCTCCGAACTTGACTCCATATGTTCCGTTAGTTGCAGGATCAGCTGCCCGCTCATTAGCTGTTATATCATGTTACCCTGTTGAACTTGCACGGACGCGAATGCAGGCGTTTAGGGAAAAACAAACTGGCACTAAGCCTCCAGGGGTGTGGAAGACGTTGGTTGAGGTCGTCAACCCTATTAGGGGTAATCGCCTTCAAGATTTACAGAACTATCGTTTCTTATGGACTGGCCTTGGGGCACAACTTGCTCGAGATGTCCCGTTTTCTGCCATCTGCTGGGCAGCACTTGAGCCTTCAAGGAGGAAAATTCTAAGCCTAGTTGGAGAGGACGCCAATGTATCAAGTGTGCTTGGTGCAAATTTCTCTGCTGGCTTCATTGCTGGAAGTCTTGCAGCTGCTGCAACATGTCCACTGGATGTTGCTAAAACCCGAAGGCAAATCGAGAGAGATTCTGAAAAGGCATTAAAGATGACTACAAGAACAACTCTGGCAGAAATTTGGAGGGATGGAGGAATCAAAGGAATGTTTACTGGAATTGGTCCCCGGGTTGGTCGTGCAGGTCCCTCTGTCGGGATAGTCGTCTCCTTCTACGAAGTTATGAAGTATGCTCTGTATCACAGACACCCAAAAGAACAAAAGAAAGGATGACTGAATAGAGGGAGTGTCACTTGGAATGTGCCGTCCCTATGTATGTAAGCTCAAGAAATCTCCTCTCCACAGATTCTTTTGGCCAAAGACCTTTGGATGGTTAAGACAGCAACTTGTAATGAAACAAAAATCTCTCCTATTGTGAGACCTCTCAAGTCCAGTTTTTCACCCAACGATTTGTTCAAACACGAGATTAGATGTACATGAACTCTTTGGTTTGATGTTTATAGTTCGATTAAGAATCTGTTTTGATAAGTTTAAAGCAGGCCATTCCAAACT ATGGTGGGCTTGAAGCCGAATTTACCCTCTTGGACGAGTTGCTCATCCACCCGGGTTGATTTTGAGGGAAACGTTTCTTCTCTATCGGATTCCATGTTCAGAGACGGCAAAGAAGGCCCCTCGGAGCAGCCGCGCCGTTCTAATACTCTCTCTGATGCCAATTTGAGCTTCGGAGAAAGATCCCTTTCCGCCGCTGCCGCCGCCGTTGTTTCTGCCATTCTCGTTAATCCCCTTGACATTGCCAAAACAAGGTTGCAAGCACAAGCTGCTGGAGTCCCATATGAAGGGCCCTGTCGGATGACAAGTTTAGAAAGGAATACGGTGATTCCTAATTTGAGATGTTCATCAGTATCCAGCTCACGTTCTCTCGTTGGCCTCGAACCTAATTGTTCGTTAGAGTGTAACCGGTATACAGGAGCGTTTGATGTGTTCAACAAGGTTATTCGTCAGGAAGGCTTTGGGAGGCTGTGGCGAGGCACATATGCAAGCTTAACTCTGGCTGTGCCAACCGTGGGGATCTACATGCCTTGTTATGATATCTTCCGCAATTTCATGGAAGATTTTACTACCAAGAACGCTCCGAACTTGACTCCATATGTTCCGTTAGTTGCAGGATCAGCTGCCCGCTCATTAGCTGTTATATCATGTTACCCTGTTGAACTTGCACGGACGCGAATGCAGGCGTTTAGGGAAAAACAAACTGGCACTAAGCCTCCAGGGGTGTGGAAGACGTTGGTTGAGGTCGTCAACCCTATTAGGGGTAATCGCCTTCAAGATTTACAGAACTATCGTTTCTTATGGACTGGCCTTGGGGCACAACTTGCTCGAGATGTCCCGTTTTCTGCCATCTGCTGGGCAGCACTTGAGCCTTCAAGGAGGAAAATTCTAAGCCTAGTTGGAGAGGACGCCAATGTATCAAGTGTGCTTGGTGCAAATTTCTCTGCTGGCTTCATTGCTGGAAGTCTTGCAGCTGCTGCAACATGTCCACTGGATGTTGCTAAAACCCGAAGGCAAATCGAGAGAGATTCTGAAAAGGCATTAAAGATGACTACAAGAACAACTCTGGCAGAAATTTGGAGGGATGGAGGAATCAAAGGAATGTTTACTGGAATTGGTCCCCGGGTTGGTCGTGCAGGTCCCTCTGTCGGGATAGTCGTCTCCTTCTACGAAGTTATGAAGTATGCTCTGTATCACAGACACCCAAAAGAACAAAAGAAAGGATGA MVGLKPNLPSWTSCSSTRVDFEGNVSSLSDSMFRDGKEGPSEQPRRSNTLSDANLSFGERSLSAAAAAVVSAILVNPLDIAKTRLQAQAAGVPYEGPCRMTSLERNTVIPNLRCSSVSSSRSLVGLEPNCSLECNRYTGAFDVFNKVIRQEGFGRLWRGTYASLTLAVPTVGIYMPCYDIFRNFMEDFTTKNAPNLTPYVPLVAGSAARSLAVISCYPVELARTRMQAFREKQTGTKPPGVWKTLVEVVNPIRGNRLQDLQNYRFLWTGLGAQLARDVPFSAICWAALEPSRRKILSLVGEDANVSSVLGANFSAGFIAGSLAAAATCPLDVAKTRRQIERDSEKALKMTTRTTLAEIWRDGGIKGMFTGIGPRVGRAGPSVGIVVSFYEVMKYALYHRHPKEQKKG Homology
BLAST of CmoCh14G021430 vs. ExPASy Swiss-Prot
Match: Q944H5 (Mitochondrial carrier protein MTM1 OS=Arabidopsis thaliana OX=3702 GN=MTM1 PE=2 SV=1) HSP 1 Score: 434.9 bits (1117), Expect = 1.0e-120 Identity = 230/400 (57.50%), Postives = 283/400 (70.75%), Query Frame = 0
BLAST of CmoCh14G021430 vs. ExPASy Swiss-Prot
Match: Q4V8K4 (Solute carrier family 25 member 39 OS=Rattus norvegicus OX=10116 GN=Slc25a39 PE=2 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 1.7e-35 Identity = 120/371 (32.35%), Postives = 177/371 (47.71%), Query Frame = 0
BLAST of CmoCh14G021430 vs. ExPASy Swiss-Prot
Match: Q17QI7 (Solute carrier family 25 member 39 OS=Bos taurus OX=9913 GN=SLC25A39 PE=2 SV=2) HSP 1 Score: 151.4 bits (381), Expect = 2.3e-35 Identity = 118/367 (32.15%), Postives = 176/367 (47.96%), Query Frame = 0
BLAST of CmoCh14G021430 vs. ExPASy Swiss-Prot
Match: Q9D8K8 (Solute carrier family 25 member 39 OS=Mus musculus OX=10090 GN=Slc25a39 PE=2 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 1.5e-34 Identity = 116/370 (31.35%), Postives = 180/370 (48.65%), Query Frame = 0
BLAST of CmoCh14G021430 vs. ExPASy Swiss-Prot
Match: Q498U3 (Solute carrier family 25 member 40 OS=Rattus norvegicus OX=10116 GN=Slc25a40 PE=2 SV=2) HSP 1 Score: 148.7 bits (374), Expect = 1.5e-34 Identity = 113/341 (33.14%), Postives = 171/341 (50.15%), Query Frame = 0
BLAST of CmoCh14G021430 vs. ExPASy TrEMBL
Match: A0A6J1EEQ5 (mitochondrial carrier protein MTM1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431858 PE=3 SV=1) HSP 1 Score: 810.4 bits (2092), Expect = 3.3e-231 Identity = 407/407 (100.00%), Postives = 407/407 (100.00%), Query Frame = 0
BLAST of CmoCh14G021430 vs. ExPASy TrEMBL
Match: A0A6J1E996 (mitochondrial carrier protein MTM1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111431858 PE=3 SV=1) HSP 1 Score: 790.0 bits (2039), Expect = 4.6e-225 Identity = 400/407 (98.28%), Postives = 401/407 (98.53%), Query Frame = 0
BLAST of CmoCh14G021430 vs. ExPASy TrEMBL
Match: A0A6J1IT31 (mitochondrial carrier protein MTM1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111479124 PE=3 SV=1) HSP 1 Score: 789.3 bits (2037), Expect = 7.9e-225 Identity = 397/403 (98.51%), Postives = 397/403 (98.51%), Query Frame = 0
BLAST of CmoCh14G021430 vs. ExPASy TrEMBL
Match: A0A6J1IQM1 (mitochondrial carrier protein MTM1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111479124 PE=3 SV=1) HSP 1 Score: 771.9 bits (1992), Expect = 1.3e-219 Identity = 391/403 (97.02%), Postives = 392/403 (97.27%), Query Frame = 0
BLAST of CmoCh14G021430 vs. ExPASy TrEMBL
Match: A0A1S4DT07 (mitochondrial carrier protein MTM1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483222 PE=3 SV=1) HSP 1 Score: 723.8 bits (1867), Expect = 4.1e-205 Identity = 364/404 (90.10%), Postives = 378/404 (93.56%), Query Frame = 0
BLAST of CmoCh14G021430 vs. TAIR 10
Match: AT2G46320.1 (Mitochondrial substrate carrier family protein ) HSP 1 Score: 471.5 bits (1212), Expect = 7.0e-133 Identity = 233/356 (65.45%), Postives = 285/356 (80.06%), Query Frame = 0
BLAST of CmoCh14G021430 vs. TAIR 10
Match: AT4G27940.1 (manganese tracking factor for mitochondrial SOD2 ) HSP 1 Score: 434.9 bits (1117), Expect = 7.2e-122 Identity = 230/400 (57.50%), Postives = 283/400 (70.75%), Query Frame = 0
BLAST of CmoCh14G021430 vs. TAIR 10
Match: AT2G46320.2 (Mitochondrial substrate carrier family protein ) HSP 1 Score: 378.6 bits (971), Expect = 6.2e-105 Identity = 181/251 (72.11%), Postives = 214/251 (85.26%), Query Frame = 0
BLAST of CmoCh14G021430 vs. TAIR 10
Match: AT2G46320.3 (Mitochondrial substrate carrier family protein ) HSP 1 Score: 378.6 bits (971), Expect = 6.2e-105 Identity = 181/251 (72.11%), Postives = 214/251 (85.26%), Query Frame = 0
BLAST of CmoCh14G021430 vs. TAIR 10
Match: AT3G53940.1 (Mitochondrial substrate carrier family protein ) HSP 1 Score: 85.1 bits (209), Expect = 1.4e-16 Identity = 68/258 (26.36%), Postives = 116/258 (44.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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