CmoCh14G016810 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh14G016810
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	BHLH domain-containing protein
Location	Cmo_Chr14: 13230992 .. 13231672 (-)
RNA-Seq Expression	CmoCh14G016810
Synteny	CmoCh14G016810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGCATGCACCGACTCTGTGGTTTCACTTTTGCCTCACATATTGCCGGTGCATCAGTCTGAAGCTGCTGAAAACAAGGCTTCGACCTCAAGAAAGCGTCGGAGAGCTCTGGAAGCCAACGGCGGTGTACAGAGGAAGGGGAGAGAGAAGAGGAAGGAGATGAGTGAGAGTTTCGATGTTCTTCAATCTCTCGTCCCGAATCTCTCTCCTAAGGTTAGTGGATTTGATTCTCGCTGTAGTGTATAATCTGGCTACTTCTACATTTTTATAATCCAGTTTTGGTGCTGAAATAATCAGGCTACGAGGGAGACTATTGTTTCCGAGACGATCCAGTTCATCGAGGATCTACAGAAGCAGTTGATGAGGCTGGAAATGGAGAAGAAACCATTGGAATCGGTGACGATGCTTCCTAGTACGAACTCGGATTCACCAGGGGGCGGCGTCATCGTCTCGGTCTCCAGCAACATCGTGTTGTTTGGGATTATTTTTGCTTCTGTTCGACGAGGTATGGTGACACAGATTTTAATGGCGTTTGAAAGACACCAGGCTGAAGTTCTAGCAGCGAATGTTGCAGTCAGCCATGGCAATTTAACTTTAACTGTCACAGCTTCTGTACATGGTTACGTAGAGAACACCATAGAGCAGATTAGAAACGATATCCTAAGCTTAAAGAAGTAA

mRNA sequence

ATGGAGGCATGCACCGACTCTGTGGTTTCACTTTTGCCTCACATATTGCCGGTGCATCAGTCTGAAGCTGCTGAAAACAAGGCTTCGACCTCAAGAAAGCGTCGGAGAGCTCTGGAAGCCAACGGCGGTGTACAGAGGAAGGGGAGAGAGAAGAGGAAGGAGATGAGTGAGAGTTTCGATGTTCTTCAATCTCTCGTCCCGAATCTCTCTCCTAAGGCTACGAGGGAGACTATTGTTTCCGAGACGATCCAGTTCATCGAGGATCTACAGAAGCAGTTGATGAGGCTGGAAATGGAGAAGAAACCATTGGAATCGGTGACGATGCTTCCTAGTACGAACTCGGATTCACCAGGGGGCGGCGTCATCGTCTCGGTCTCCAGCAACATCGTGTTGTTTGGGATTATTTTTGCTTCTGTTCGACGAGGTATGGTGACACAGATTTTAATGGCGTTTGAAAGACACCAGGCTGAAGTTCTAGCAGCGAATGTTGCAGTCAGCCATGGCAATTTAACTTTAACTGTCACAGCTTCTGTACATGGTTACGTAGAGAACACCATAGAGCAGATTAGAAACGATATCCTAAGCTTAAAGAAGTAA

Coding sequence (CDS)

ATGGAGGCATGCACCGACTCTGTGGTTTCACTTTTGCCTCACATATTGCCGGTGCATCAGTCTGAAGCTGCTGAAAACAAGGCTTCGACCTCAAGAAAGCGTCGGAGAGCTCTGGAAGCCAACGGCGGTGTACAGAGGAAGGGGAGAGAGAAGAGGAAGGAGATGAGTGAGAGTTTCGATGTTCTTCAATCTCTCGTCCCGAATCTCTCTCCTAAGGCTACGAGGGAGACTATTGTTTCCGAGACGATCCAGTTCATCGAGGATCTACAGAAGCAGTTGATGAGGCTGGAAATGGAGAAGAAACCATTGGAATCGGTGACGATGCTTCCTAGTACGAACTCGGATTCACCAGGGGGCGGCGTCATCGTCTCGGTCTCCAGCAACATCGTGTTGTTTGGGATTATTTTTGCTTCTGTTCGACGAGGTATGGTGACACAGATTTTAATGGCGTTTGAAAGACACCAGGCTGAAGTTCTAGCAGCGAATGTTGCAGTCAGCCATGGCAATTTAACTTTAACTGTCACAGCTTCTGTACATGGTTACGTAGAGAACACCATAGAGCAGATTAGAAACGATATCCTAAGCTTAAAGAAGTAA

Protein sequence

MEACTDSVVSLLPHILPVHQSEAAENKASTSRKRRRALEANGGVQRKGREKRKEMSESFDVLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEKKPLESVTMLPSTNSDSPGGGVIVSVSSNIVLFGIIFASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHGYVENTIEQIRNDILSLKK

Homology

[Close]

BLAST of CmoCh14G016810 vs. ExPASy Swiss-Prot
Match: Q9FXA3 (Transcription factor bHLH95 OS=Arabidopsis thaliana OX=3702 GN=BHLH95 PE=2 SV=2)

HSP 1 Score: 49.7 bits (117), Expect = 4.5e-05
Identity = 27/69 (39.13%), Postives = 44/69 (63.77%), Query Frame = 0


Query: 49  REKRKEMSESFDVLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEKKPLESVTM 108
           RE+RK+M + F  L +L+P L PKA + TIV E +  I+ L++ L +LEM+K  LE +  
Sbjct: 79  RERRKKMRDMFSKLHALLPQLPPKADKSTIVDEAVSSIKSLEQTLQKLEMQK--LEKLQY 138

Query: 109 LPSTNSDSP 118
             ++ + +P
Sbjct: 139 SSASTNTTP 145

[Close]

BLAST of CmoCh14G016810 vs. ExPASy TrEMBL
Match: A0A6J1GWN9 (uncharacterized protein LOC111457820 OS=Cucurbita moschata OX=3662 GN=LOC111457838 PE=4 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 3.0e-97
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0


Query: 1   MEACTDSVVSLLPHILPVHQSEAAENKASTSRKRRRALEANGGVQRKGREKRKEMSESFD 60
           MEACTDSVVSLLPHILPVHQSEAAENKASTSRKRRRALEANGGVQRKGREKRKEMSESFD
Sbjct: 1   MEACTDSVVSLLPHILPVHQSEAAENKASTSRKRRRALEANGGVQRKGREKRKEMSESFD 60

Query: 61  VLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEKKPLESVTMLPSTNSDSPGGG 120
           VLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEKKPLESVTMLPSTNSDSPGGG
Sbjct: 61  VLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEKKPLESVTMLPSTNSDSPGGG 120

Query: 121 VIVSVSSNIVLFGIIFASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHG 180
           VIVSVSSNIVLFGIIFASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHG
Sbjct: 121 VIVSVSSNIVLFGIIFASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHG 180

Query: 181 YVENTIEQIRNDILSLKK 199
           YVENTIEQIRNDILSLKK
Sbjct: 181 YVENTIEQIRNDILSLKK 198

[Close]

BLAST of CmoCh14G016810 vs. ExPASy TrEMBL
Match: A0A6J1IS55 (uncharacterized protein LOC111479473 OS=Cucurbita maxima OX=3661 GN=LOC111479473 PE=4 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 2.7e-93
Identity = 195/203 (96.06%), Postives = 196/203 (96.55%), Query Frame = 0


Query: 1   MEACTDSVVSLLPHILPVHQSEAAENKASTSRKRRRALEANGGVQRKGREKRKEMSESFD 60
           MEACTDSVVSLLPHILPVHQSEAAENKASTSRKR RALEANGG QRKGREKRKEMSESFD
Sbjct: 1   MEACTDSVVSLLPHILPVHQSEAAENKASTSRKRWRALEANGGEQRKGREKRKEMSESFD 60

Query: 61  VLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEKKPLESVTMLPSTNSDSPG-- 120
           VLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEKKPLESVTMLPSTNSDSPG  
Sbjct: 61  VLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEKKPLESVTMLPSTNSDSPGGD 120

Query: 121 ---GGVIVSVSSNIVLFGIIFASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVT 180
              GGVIVSVSSNIVLFGIIFASVRRGMVT+ILMAFERHQAEVLAANVAVSHGNLTLTVT
Sbjct: 121 GGDGGVIVSVSSNIVLFGIIFASVRRGMVTRILMAFERHQAEVLAANVAVSHGNLTLTVT 180

Query: 181 ASVHGYVENTIEQIRNDILSLKK 199
           ASVHGYVENTIEQIRNDILSLKK
Sbjct: 181 ASVHGYVENTIEQIRNDILSLKK 203

[Close]

BLAST of CmoCh14G016810 vs. ExPASy TrEMBL
Match: A0A5A7U767 (Transcription factor bHLH95-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00480 PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 5.0e-76
Identity = 163/201 (81.09%), Postives = 177/201 (88.06%), Query Frame = 0


Query: 1   MEACTDSVVSLLPHILPVHQSEAAENKASTSRKRRRALEANGGVQRKGREKRKEMSESFD 60
           MEAC+DSVV L P ILP+H  EA E +AS SRKR RALEANGGVQ+K +EKRKEMSESFD
Sbjct: 1   MEACSDSVVPLFPLILPIHHFEATEKEASASRKRCRALEANGGVQKKEKEKRKEMSESFD 60

Query: 61  VLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEKKPLESVTMLPSTNSDSPGG- 120
           VL+SLVPNLSPKATRETIVS  IQFIE LQKQLMRLEMEKK  ESVT+LP++NSDS GG 
Sbjct: 61  VLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESVTLLPNSNSDSSGGN 120

Query: 121 --GVIVSVSSNIVLFGIIFASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTAS 180
             GVIVS+S NIVLFG+I ASV+RGMVTQIL+ FERH+ EVLAANV VSHGNLTLTVTAS
Sbjct: 121 GDGVIVSISGNIVLFGVIIASVQRGMVTQILLVFERHKTEVLAANVVVSHGNLTLTVTAS 180

Query: 181 VHGYVENTIEQIRNDILSLKK 199
           VHGYVENTIEQIRNDILSLKK
Sbjct: 181 VHGYVENTIEQIRNDILSLKK 201

[Close]

BLAST of CmoCh14G016810 vs. ExPASy TrEMBL
Match: A0A1S4DSM0 (transcription factor bHLH95-like OS=Cucumis melo OX=3656 GN=LOC103483801 PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 5.0e-76
Identity = 163/201 (81.09%), Postives = 177/201 (88.06%), Query Frame = 0


Query: 1   MEACTDSVVSLLPHILPVHQSEAAENKASTSRKRRRALEANGGVQRKGREKRKEMSESFD 60
           MEAC+DSVV L P ILP+H  EA E +AS SRKR RALEANGGVQ+K +EKRKEMSESFD
Sbjct: 1   MEACSDSVVPLFPLILPIHHFEATEKEASASRKRCRALEANGGVQKKEKEKRKEMSESFD 60

Query: 61  VLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEKKPLESVTMLPSTNSDSPGG- 120
           VL+SLVPNLSPKATRETIVS  IQFIE LQKQLMRLEMEKK  ESVT+LP++NSDS GG 
Sbjct: 61  VLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESVTLLPNSNSDSSGGN 120

Query: 121 --GVIVSVSSNIVLFGIIFASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTAS 180
             GVIVS+S NIVLFG+I ASV+RGMVTQIL+ FERH+ EVLAANV VSHGNLTLTVTAS
Sbjct: 121 GDGVIVSISGNIVLFGVIIASVQRGMVTQILLVFERHKTEVLAANVVVSHGNLTLTVTAS 180

Query: 181 VHGYVENTIEQIRNDILSLKK 199
           VHGYVENTIEQIRNDILSLKK
Sbjct: 181 VHGYVENTIEQIRNDILSLKK 201

[Close]

BLAST of CmoCh14G016810 vs. ExPASy TrEMBL
Match: A0A0A0L5R7 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G151510 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 2.5e-75
Identity = 162/202 (80.20%), Postives = 176/202 (87.13%), Query Frame = 0


Query: 1   MEACTDSVVSLLPHILPVHQSEAAENKASTSRKRRRALEANGGVQRKGREKRKEMSESFD 60
           MEAC+DSV+ L P ILPVH  EA E +AS SRKR RALEANGGVQ+K +EKRKEMSESFD
Sbjct: 1   MEACSDSVIPLFPLILPVHHFEATEKEASASRKRCRALEANGGVQKKEKEKRKEMSESFD 60

Query: 61  VLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEKKPLESVTMLPSTNSDSPGG- 120
           VL+SLVPNLSPKATRETIVS  IQFIE LQKQLMRLEMEKK  ESV +LP+TNSDS GG 
Sbjct: 61  VLRSLVPNLSPKATRETIVSGAIQFIEFLQKQLMRLEMEKKSSESVALLPNTNSDSSGGI 120

Query: 121 ---GVIVSVSSNIVLFGIIFASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTA 180
              GVIVS+S NIVLFG+I ASV+RG+VTQIL+ FERH+AEVLAANV VSHGNLTLTVTA
Sbjct: 121 NGDGVIVSISGNIVLFGVIIASVQRGIVTQILLVFERHKAEVLAANVVVSHGNLTLTVTA 180

Query: 181 SVHGYVENTIEQIRNDILSLKK 199
           SVHGYVENTIEQIRNDIL LKK
Sbjct: 181 SVHGYVENTIEQIRNDILGLKK 202

[Close]

BLAST of CmoCh14G016810 vs. NCBI nr
Match: XP_022955986.1 (uncharacterized protein LOC111457820 [Cucurbita moschata] >XP_022956015.1 uncharacterized protein LOC111457838 isoform X1 [Cucurbita moschata])

HSP 1 Score: 364.4 bits (934), Expect = 6.3e-97
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0


Query: 1   MEACTDSVVSLLPHILPVHQSEAAENKASTSRKRRRALEANGGVQRKGREKRKEMSESFD 60
           MEACTDSVVSLLPHILPVHQSEAAENKASTSRKRRRALEANGGVQRKGREKRKEMSESFD
Sbjct: 1   MEACTDSVVSLLPHILPVHQSEAAENKASTSRKRRRALEANGGVQRKGREKRKEMSESFD 60

Query: 61  VLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEKKPLESVTMLPSTNSDSPGGG 120
           VLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEKKPLESVTMLPSTNSDSPGGG
Sbjct: 61  VLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEKKPLESVTMLPSTNSDSPGGG 120

Query: 121 VIVSVSSNIVLFGIIFASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHG 180
           VIVSVSSNIVLFGIIFASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHG
Sbjct: 121 VIVSVSSNIVLFGIIFASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHG 180

Query: 181 YVENTIEQIRNDILSLKK 199
           YVENTIEQIRNDILSLKK
Sbjct: 181 YVENTIEQIRNDILSLKK 198

[Close]

BLAST of CmoCh14G016810 vs. NCBI nr
Match: KAG6582238.1 (Transcription factor basic helix-loop-helix 95, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018637.1 Transcription factor bHLH95 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 363.2 bits (931), Expect = 1.4e-96
Identity = 197/198 (99.49%), Postives = 198/198 (100.00%), Query Frame = 0


Query: 1   MEACTDSVVSLLPHILPVHQSEAAENKASTSRKRRRALEANGGVQRKGREKRKEMSESFD 60
           MEACTDSVV+LLPHILPVHQSEAAENKASTSRKRRRALEANGGVQRKGREKRKEMSESFD
Sbjct: 1   MEACTDSVVTLLPHILPVHQSEAAENKASTSRKRRRALEANGGVQRKGREKRKEMSESFD 60

Query: 61  VLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEKKPLESVTMLPSTNSDSPGGG 120
           VLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEKKPLESVTMLPSTNSDSPGGG
Sbjct: 61  VLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEKKPLESVTMLPSTNSDSPGGG 120

Query: 121 VIVSVSSNIVLFGIIFASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHG 180
           VIVSVSSNIVLFGIIFASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHG
Sbjct: 121 VIVSVSSNIVLFGIIFASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTASVHG 180

Query: 181 YVENTIEQIRNDILSLKK 199
           YVENTIEQIRNDILSLKK
Sbjct: 181 YVENTIEQIRNDILSLKK 198

[Close]

BLAST of CmoCh14G016810 vs. NCBI nr
Match: XP_023528352.1 (uncharacterized protein LOC111791298 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 356.3 bits (913), Expect = 1.7e-94
Identity = 196/201 (97.51%), Postives = 197/201 (98.01%), Query Frame = 0


Query: 1   MEACTDSVVSLLPHILPVHQSEAAENKASTSRKRRRALEANGGVQRKGREKRKEMSESFD 60
           MEACTDSVVSLLPHILPVHQSEAAENKASTSRKRRRALEANGGVQRKGREKRKEMSESFD
Sbjct: 1   MEACTDSVVSLLPHILPVHQSEAAENKASTSRKRRRALEANGGVQRKGREKRKEMSESFD 60

Query: 61  VLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEKKPLESVTMLPSTNSDSPG-- 120
           VLQSLVPNLSPKATRETIVSETIQFIEDLQKQL RLEMEKKPLESVTMLPSTNSDSPG  
Sbjct: 61  VLQSLVPNLSPKATRETIVSETIQFIEDLQKQLTRLEMEKKPLESVTMLPSTNSDSPGGG 120

Query: 121 -GGVIVSVSSNIVLFGIIFASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTAS 180
            GGVIVSVSSNIVLFGIIFASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTAS
Sbjct: 121 DGGVIVSVSSNIVLFGIIFASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTAS 180

Query: 181 VHGYVENTIEQIRNDILSLKK 199
           +HGYVENTIEQIRNDILSLKK
Sbjct: 181 IHGYVENTIEQIRNDILSLKK 201

[Close]

BLAST of CmoCh14G016810 vs. NCBI nr
Match: XP_022979931.1 (uncharacterized protein LOC111479473 [Cucurbita maxima])

HSP 1 Score: 351.3 bits (900), Expect = 5.5e-93
Identity = 195/203 (96.06%), Postives = 196/203 (96.55%), Query Frame = 0


Query: 1   MEACTDSVVSLLPHILPVHQSEAAENKASTSRKRRRALEANGGVQRKGREKRKEMSESFD 60
           MEACTDSVVSLLPHILPVHQSEAAENKASTSRKR RALEANGG QRKGREKRKEMSESFD
Sbjct: 1   MEACTDSVVSLLPHILPVHQSEAAENKASTSRKRWRALEANGGEQRKGREKRKEMSESFD 60

Query: 61  VLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEKKPLESVTMLPSTNSDSPG-- 120
           VLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEKKPLESVTMLPSTNSDSPG  
Sbjct: 61  VLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEKKPLESVTMLPSTNSDSPGGD 120

Query: 121 ---GGVIVSVSSNIVLFGIIFASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVT 180
              GGVIVSVSSNIVLFGIIFASVRRGMVT+ILMAFERHQAEVLAANVAVSHGNLTLTVT
Sbjct: 121 GGDGGVIVSVSSNIVLFGIIFASVRRGMVTRILMAFERHQAEVLAANVAVSHGNLTLTVT 180

Query: 181 ASVHGYVENTIEQIRNDILSLKK 199
           ASVHGYVENTIEQIRNDILSLKK
Sbjct: 181 ASVHGYVENTIEQIRNDILSLKK 203

[Close]

BLAST of CmoCh14G016810 vs. NCBI nr
Match: XP_038885840.1 (transcription factor bHLH95-like [Benincasa hispida])

HSP 1 Score: 315.5 bits (807), Expect = 3.3e-82
Identity = 179/201 (89.05%), Postives = 182/201 (90.55%), Query Frame = 0


Query: 1   MEACTDSVVSLLPHILPVHQSEAAENKASTSRKRRRALEANGGVQRKGREKRKEMSESFD 60
           MEACTDSVV L P ILPVHQSEA E KAS SRKR RALEANGGVQ+K REKRKEMSESFD
Sbjct: 1   MEACTDSVVPLFPLILPVHQSEATEKKASASRKRIRALEANGGVQKKEREKRKEMSESFD 60

Query: 61  VLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEKKPLESVTMLPSTNSDSP--- 120
           VLQSLVPNLSPKATRETIVSETIQFIE LQKQLMRLEMEKK  ESVTMLPSTNSDS    
Sbjct: 61  VLQSLVPNLSPKATRETIVSETIQFIEFLQKQLMRLEMEKKSSESVTMLPSTNSDSSGGG 120

Query: 121 GGGVIVSVSSNIVLFGIIFASVRRGMVTQILMAFERHQAEVLAANVAVSHGNLTLTVTAS 180
           GGGVIVSVS NIVLFGII ASV+RGMVTQILM FERHQAEVLAANVAVSHGNLTLTVTAS
Sbjct: 121 GGGVIVSVSGNIVLFGIIIASVQRGMVTQILMVFERHQAEVLAANVAVSHGNLTLTVTAS 180

Query: 181 VHGYVENTIEQIRNDILSLKK 199
           VHGYVENTIE I+NDILSLKK
Sbjct: 181 VHGYVENTIELIKNDILSLKK 201

[Close]

BLAST of CmoCh14G016810 vs. TAIR 10
Match: AT1G49770.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 49.7 bits (117), Expect = 3.2e-06
Identity = 27/69 (39.13%), Postives = 44/69 (63.77%), Query Frame = 0


Query: 49  REKRKEMSESFDVLQSLVPNLSPKATRETIVSETIQFIEDLQKQLMRLEMEKKPLESVTM 108
           RE+RK+M + F  L +L+P L PKA + TIV E +  I+ L++ L +LEM+K  LE +  
Sbjct: 79  RERRKKMRDMFSKLHALLPQLPPKADKSTIVDEAVSSIKSLEQTLQKLEMQK--LEKLQY 138

Query: 109 LPSTNSDSP 118
             ++ + +P
Sbjct: 139 SSASTNTTP 145

The following BLAST results are available for this feature:

BLAST of CmoCh14G016810 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FXA3	4.5e-05	39.13	Transcription factor bHLH95 OS=Arabidopsis thaliana OX=3702 GN=BHLH95 PE=2 SV=2	[more]

BLAST of CmoCh14G016810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GWN9	3.0e-97	100.00	uncharacterized protein LOC111457820 OS=Cucurbita moschata OX=3662 GN=LOC1114578...	[more]
A0A6J1IS55	2.7e-93	96.06	uncharacterized protein LOC111479473 OS=Cucurbita maxima OX=3661 GN=LOC111479473...	[more]
A0A5A7U767	5.0e-76	81.09	Transcription factor bHLH95-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S4DSM0	5.0e-76	81.09	transcription factor bHLH95-like OS=Cucumis melo OX=3656 GN=LOC103483801 PE=4 SV...	[more]
A0A0A0L5R7	2.5e-75	80.20	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G151510 PE=4 S...	[more]

BLAST of CmoCh14G016810 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022955986.1	6.3e-97	100.00	uncharacterized protein LOC111457820 [Cucurbita moschata] >XP_022956015.1 unchar...	[more]
KAG6582238.1	1.4e-96	99.49	Transcription factor basic helix-loop-helix 95, partial [Cucurbita argyrosperma ...	[more]
XP_023528352.1	1.7e-94	97.51	uncharacterized protein LOC111791298 [Cucurbita pepo subsp. pepo]	[more]
XP_022979931.1	5.5e-93	96.06	uncharacterized protein LOC111479473 [Cucurbita maxima]	[more]
XP_038885840.1	3.3e-82	89.05	transcription factor bHLH95-like [Benincasa hispida]	[more]

BLAST of CmoCh14G016810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G49770.1	3.2e-06	39.13	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 79..106
None	No IPR available	COILS	Coil	Coil	coord: 21..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..55
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..55
None	No IPR available	PANTHER	PTHR31945:SF53	HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN	coord: 8..195
None	No IPR available	PANTHER	PTHR31945	TRANSCRIPTION FACTOR SCREAM2-RELATED	coord: 8..195
None	No IPR available	CDD	cd11393	bHLH_AtbHLH_like	coord: 49..97 e-value: 9.94776E-9 score: 47.9464
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 47..95 e-value: 7.0E-5 score: 32.2
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 49..90 e-value: 2.9E-4 score: 20.8
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 39..89 score: 9.330667
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 44..113 e-value: 4.8E-9 score: 38.1
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 49..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh14G016810.1	CmoCh14G016810.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0043565	sequence-specific DNA binding