CmoCh14G014480 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CATCTTTCTCTCTCAGAGTTCGTTCCTCGAAATATGTCCTTTGTTGAGTTGGATTTCTTCGCCATGGACAGTCGATCCCTCAACTCCGACTCCAATCCCACTCTCTTCCGTCGCCATAGAAGCTTCAAAGGTTCCACAATTTCTTTATGCATTCTGTTTTTCATCCAATGTTTACAAATTACGCGATATCTTGCTTTCAGATATTCAAGGCGCCATTTCCAAAATCAATCCTGAGATTCTCAAATCTCTCATCGCCTCTGGCTCTACAGAGCATAGTTCCGATTTCGCCACTCCGATTCCTCAGAAATTTCCGCCGCTGTCACTGCACCGGACTCCTAATGTTGATCAGAATCTCTCCACGCCACCGCCTGTTTATTCCGCTACTACCTCTAGGCATTCTTCAAATCCTTCATTGTTCGGTTCTGTAATCGTAATTCGTTGTTTGATTTCTGAAACTCTACTCTTCTTTTTGTTATAAAATCATGATTGTGGTTTCTGATTTTCAGGATGAGTCCAGTGATCGCTTCCGAAAAATATCCTCTAACGATTTTCTACAACGAAACCGTCTCCGTTTTCCACGTTTCGCGTGATGAGGTATCATTCGTTTAAACCATTTCCTCTTCCTTTCCGTAATCATGTACGGATTTCAACCTAAAATATACGCTGCCTTTTACTGAAGGATGAAAAAAAATTAAAAGGAAAAATAAATTAATTTATATTCATCAGCTTTAGAGTTTATTAATTAAAATTCAACTTCAAACTTTAAGAAATCAATATAAAATTAAGAACTAAATCGATTTAGAGCCATACAAATTATTAGTTATCTAACTTGCACATATTTTAGACGTTTGAATTTGGTAAATAAAAACATTATATTCATATTTATGTCATTTTTATTTTTACAAAATATTTAGTGGATATTACTTTATTGGTTGTTGGGATAAGCATTCTATTTTATTCCACTAGTCGTTAAATTTATATTATATTGATTAAATTAAAGTTATTTTCCAATTTCATTCATGTTTTAAATCCCTTACTTTACTTGCACCTTTTGCAAAAGAATAATTTACTTGATATTTTATATTTGGCACGTTTTTTTAGTTTTTATATATACATAACTATAATTAGTTGCTATATATGGTCCTCTTTATTTATTCTATCCATCATTAATTATTTATTCTATCCATCATTATTTAGAATAGATAATTTATTGAGATTCTACCTTTTTTTTTTTGTTATTAGTATTAGGTTAGACTTTGTTAATTTGAATATGATTTAATCCGTGATTGAGTTAGTGGTCAAAGAGATAATTTTTTTTATAGGTTTGAATTTTTGTTCCATTTTTTATAATATAAATATATTCATTATATAACATGAAAATGAATTATTCAAGTGTGGTTTTGAATTTTATGTTTATTTTTACTGCAAAAGTTTTTAATAAATATTTATCGAAATTTATAATTTTGTTGAAAAAGAAATTATTCCTTACAATTTATAATCATTTCCCTTCTCCTCCTCTTACTTCTCTTACCCATGTGTTTCACAAATAATAATTATAATTAAAATAAAATAAAATAAAAAAGTAAAACGAAAGGGGATTTGGCCTTTGTTACGAATGAACCCAGAACTGAGGATCGATTTATATATGTGTATATATATATATTGAAAGAGGATTTGCCTTTTGTGCTAGAAGACGCTGATGATCGATTGGGAGAGGCGCCATATGGTGCTGTCCCCGGTACGACGTCCCTTTAATTAAAACGAAGTTGTTGTAGGATGTTGCGTGGGGAAGACAAGCTGAGTTTGCCTCTTTTCCTCCCTGTAGTAGGCCTGAAATGAACCCACATGTTGGTCCTTCCATATCTGAAATGAAGGGAAACACTTTTTGTGCTTTGAAAAACATAGTTAAGAGGGGAAGGAAACAAAAGGAACCATGAAAAAGGCCGCTGATGACTGGTGTTCAGTGTGTTGAGGATTGTCCTATGTTGACTAATTTAGGGAATGATCATGAGTTTATAAGTGCATTTCTCCATTGAAATGAGGTATTTTGGGGAACAAGTCTAAAGCAATACCATCTAAAGCAATACCATGTGAGTTTATGCTCAAAGTAAGAATATCATACAATTAATCAGAGCTGTGATTACTAACATGGAGGCGAGCGGCAGCGAATATCCACGGGCGACCATGCATGGAGAAAGAAGAGGGAGGAAAAAAAGATGGATTTTAAAAAATAAAGGAATTCTTTTAGTAATTAAAATCTCAAATGATCAAAACTGTACTTTTTCCAATATTGTTTGATGAATCTCGTTTCCCTGTCTAACCATATATGCTATACTCGCACTGATAGGCCAAAAACATTATGAGGTTTGCTGAAAAGGCGAGTGGCACTGGCACTGGCATTAGAAAGGGTGAAGCCGAAAAGGGCCGACCAATGGCTGAAATTACTTCAAATCAGAACCAGCAACCGGTGGCCATTGATCCTGAAGATGATGAGGGTACGTATAGGATAGATAATTTTCTAGCAATGTGAGTTAAAAATGAACAAGATTGGTCATTGATTTTTTAGTTGAAAGTGTATATGTTTTAACTGTATAATACAATTTTGGGAATATATATATATATAATTTCTGTAAGCCCTAAACTATAGATAGCCCTTATTTCAATGTCTTCCAATAATTTCTCTTAAAAGACTGGTTAATTTGTTCTCAGATCTTCCATTGGCAAGGAAAAGGTCACTCCAGAGATTTTTGGAGAGGCGGAAGGAGAGGTAACACCCCCAATGTTTATTTACTTAGACAGAATTTACTTGGTCTAATAGATATCTCTGTTTATGTTTGATATGAACTAAATCAAATGGAAGTGCAACTAACCTGATTTGCTCGAAAACACTTCATTATTCTTTCAATATTTTGGATAAAACTGAATCCATTGGCCTTCTTGAGTTAGAAACTATTAGGGATTGAACATTGAACATATGCATAATGTGAGATTTAAGTTAAAAAGAGTGTGATAAATGAGTAGTTATCAGCATGTCGATGAAATCTTTTAGCATTTGTTGATGAATTGGTAGTTTAAACATTTGATGCATCATCGACGTTTAAGAAATGAATTTGAACTGTGATTAAGAAGCTTCACATTAGCAATAAAAAAAGGATTTGTATTTATGTTCAGTGGGGTTATGATTTATAGGTTAATTCCGGCGGTGCCCTATGGTTGTCGCTTCTAATCAGGGAAGGGAAGGGAAGGCAAGAC CATCTTTCTCTCTCAGAGTTCGTTCCTCGAAATATGTCCTTTGTTGAGTTGGATTTCTTCGCCATGGACAGTCGATCCCTCAACTCCGACTCCAATCCCACTCTCTTCCGTCGCCATAGAAGCTTCAAAGATATTCAAGGCGCCATTTCCAAAATCAATCCTGAGATTCTCAAATCTCTCATCGCCTCTGGCTCTACAGAGCATAGTTCCGATTTCGCCACTCCGATTCCTCAGAAATTTCCGCCGCTGTCACTGCACCGGACTCCTAATGTTGATCAGAATCTCTCCACGCCACCGCCTGTTTATTCCGCTACTACCTCTAGGATGAGTCCAGTGATCGCTTCCGAAAAATATCCTCTAACGATTTTCTACAACGAAACCGTCTCCGTTTTCCACGTTTCGCGTGATGAGGCCAAAAACATTATGAGGTTTGCTGAAAAGGCGAGTGGCACTGGCACTGGCATTAGAAAGGGTGAAGCCGAAAAGGGCCGACCAATGGCTGAAATTACTTCAAATCAGAACCAGCAACCGGTGGCCATTGATCCTGAAGATGATGAGGATCTTCCATTGGCAAGGAAAAGGTCACTCCAGAGATTTTTGGAGAGGCGGAAGGAGAGGTTAATTCCGGCGGTGCCCTATGGTTGTCGCTTCTAATCAGGGAAGGGAAGGGAAGGCAAGAC ATGTCCTTTGTTGAGTTGGATTTCTTCGCCATGGACAGTCGATCCCTCAACTCCGACTCCAATCCCACTCTCTTCCGTCGCCATAGAAGCTTCAAAGATATTCAAGGCGCCATTTCCAAAATCAATCCTGAGATTCTCAAATCTCTCATCGCCTCTGGCTCTACAGAGCATAGTTCCGATTTCGCCACTCCGATTCCTCAGAAATTTCCGCCGCTGTCACTGCACCGGACTCCTAATGTTGATCAGAATCTCTCCACGCCACCGCCTGTTTATTCCGCTACTACCTCTAGGATGAGTCCAGTGATCGCTTCCGAAAAATATCCTCTAACGATTTTCTACAACGAAACCGTCTCCGTTTTCCACGTTTCGCGTGATGAGGCCAAAAACATTATGAGGTTTGCTGAAAAGGCGAGTGGCACTGGCACTGGCATTAGAAAGGGTGAAGCCGAAAAGGGCCGACCAATGGCTGAAATTACTTCAAATCAGAACCAGCAACCGGTGGCCATTGATCCTGAAGATGATGAGGATCTTCCATTGGCAAGGAAAAGGTCACTCCAGAGATTTTTGGAGAGGCGGAAGGAGAGGTTAATTCCGGCGGTGCCCTATGGTTGTCGCTTCTAA MSFVELDFFAMDSRSLNSDSNPTLFRRHRSFKDIQGAISKINPEILKSLIASGSTEHSSDFATPIPQKFPPLSLHRTPNVDQNLSTPPPVYSATTSRMSPVIASEKYPLTIFYNETVSVFHVSRDEAKNIMRFAEKASGTGTGIRKGEAEKGRPMAEITSNQNQQPVAIDPEDDEDLPLARKRSLQRFLERRKERLIPAVPYGCRF Homology
BLAST of CmoCh14G014480 vs. ExPASy Swiss-Prot
Match: Q93ZM9 (Protein TIFY 9 OS=Arabidopsis thaliana OX=3702 GN=TIFY9 PE=1 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 2.8e-26 Identity = 82/203 (40.39%), Postives = 117/203 (57.64%), Query Frame = 0
BLAST of CmoCh14G014480 vs. ExPASy Swiss-Prot
Match: A2XSX6 (Protein TIFY 9 OS=Oryza sativa subsp. indica OX=39946 GN=TIFY9 PE=3 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 1.1e-09 Identity = 61/205 (29.76%), Postives = 90/205 (43.90%), Query Frame = 0
BLAST of CmoCh14G014480 vs. ExPASy Swiss-Prot
Match: Q7XV97 (Protein TIFY 9 OS=Oryza sativa subsp. japonica OX=39947 GN=TIFY9 PE=1 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 1.1e-09 Identity = 59/205 (28.78%), Postives = 88/205 (42.93%), Query Frame = 0
BLAST of CmoCh14G014480 vs. ExPASy Swiss-Prot
Match: Q9LMA8 (Protein TIFY 10A OS=Arabidopsis thaliana OX=3702 GN=TIFY10A PE=1 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 1.7e-07 Identity = 45/137 (32.85%), Postives = 68/137 (49.64%), Query Frame = 0
BLAST of CmoCh14G014480 vs. ExPASy Swiss-Prot
Match: Q9S7M2 (Protein TIFY 10B OS=Arabidopsis thaliana OX=3702 GN=TIFY10B PE=1 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 2.1e-05 Identity = 42/124 (33.87%), Postives = 58/124 (46.77%), Query Frame = 0
BLAST of CmoCh14G014480 vs. ExPASy TrEMBL
Match: A0A6J1GWT1 (protein TIFY 9-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457867 PE=3 SV=1) HSP 1 Score: 406.0 bits (1042), Expect = 9.5e-110 Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0
BLAST of CmoCh14G014480 vs. ExPASy TrEMBL
Match: A0A6J1GXZ7 (protein TIFY 9-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457867 PE=3 SV=1) HSP 1 Score: 399.4 bits (1025), Expect = 8.9e-108 Identity = 206/212 (97.17%), Postives = 206/212 (97.17%), Query Frame = 0
BLAST of CmoCh14G014480 vs. ExPASy TrEMBL
Match: A0A6J1ISR6 (protein TIFY 9-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111479616 PE=3 SV=1) HSP 1 Score: 378.3 bits (970), Expect = 2.1e-101 Identity = 193/206 (93.69%), Postives = 196/206 (95.15%), Query Frame = 0
BLAST of CmoCh14G014480 vs. ExPASy TrEMBL
Match: A0A6J1IVD8 (protein TIFY 9-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111479616 PE=3 SV=1) HSP 1 Score: 371.7 bits (953), Expect = 2.0e-99 Identity = 193/212 (91.04%), Postives = 196/212 (92.45%), Query Frame = 0
BLAST of CmoCh14G014480 vs. ExPASy TrEMBL
Match: A0A0A0KX64 (Tify domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G009880 PE=3 SV=1) HSP 1 Score: 231.1 bits (588), Expect = 4.2e-57 Identity = 133/209 (63.64%), Postives = 156/209 (74.64%), Query Frame = 0
BLAST of CmoCh14G014480 vs. NCBI nr
Match: XP_022956060.1 (protein TIFY 9-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 406.0 bits (1042), Expect = 2.0e-109 Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0
BLAST of CmoCh14G014480 vs. NCBI nr
Match: XP_022956059.1 (protein TIFY 9-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 399.4 bits (1025), Expect = 1.8e-107 Identity = 206/212 (97.17%), Postives = 206/212 (97.17%), Query Frame = 0
BLAST of CmoCh14G014480 vs. NCBI nr
Match: KAG6581992.1 (Protein TIFY 9, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 392.1 bits (1006), Expect = 2.9e-105 Identity = 199/206 (96.60%), Postives = 202/206 (98.06%), Query Frame = 0
BLAST of CmoCh14G014480 vs. NCBI nr
Match: XP_023528529.1 (protein TIFY 9-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 382.5 bits (981), Expect = 2.3e-102 Identity = 195/205 (95.12%), Postives = 199/205 (97.07%), Query Frame = 0
BLAST of CmoCh14G014480 vs. NCBI nr
Match: XP_022980141.1 (protein TIFY 9-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 378.3 bits (970), Expect = 4.4e-101 Identity = 193/206 (93.69%), Postives = 196/206 (95.15%), Query Frame = 0
BLAST of CmoCh14G014480 vs. TAIR 10
Match: AT5G13220.1 (jasmonate-zim-domain protein 10 ) HSP 1 Score: 120.2 bits (300), Expect = 2.0e-27 Identity = 82/203 (40.39%), Postives = 117/203 (57.64%), Query Frame = 0
BLAST of CmoCh14G014480 vs. TAIR 10
Match: AT5G13220.2 (jasmonate-zim-domain protein 10 ) HSP 1 Score: 112.5 bits (280), Expect = 4.2e-25 Identity = 79/196 (40.31%), Postives = 113/196 (57.65%), Query Frame = 0
BLAST of CmoCh14G014480 vs. TAIR 10
Match: AT5G13220.3 (jasmonate-zim-domain protein 10 ) HSP 1 Score: 112.5 bits (280), Expect = 4.2e-25 Identity = 79/196 (40.31%), Postives = 113/196 (57.65%), Query Frame = 0
BLAST of CmoCh14G014480 vs. TAIR 10
Match: AT5G13220.4 (jasmonate-zim-domain protein 10 ) HSP 1 Score: 91.3 bits (225), Expect = 9.9e-19 Identity = 59/139 (42.45%), Postives = 83/139 (59.71%), Query Frame = 0
BLAST of CmoCh14G014480 vs. TAIR 10
Match: AT1G19180.1 (jasmonate-zim-domain protein 1 ) HSP 1 Score: 57.8 bits (138), Expect = 1.2e-08 Identity = 45/137 (32.85%), Postives = 68/137 (49.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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