CmoCh14G014180 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTTCCGCCCCTTTTTTGTTTATGTTTCCGATGTTAATTTTCTATTTGGTTCGAGGATATTTAGCAATGGAGTTGTTATTAATCGCAGTAAGCGAGTGGGAGTGAGATCGAAATGTGGTGCAGAAGAATCTCCTGCAATGGCGACTCTGGATCGGTGCCAGTGTACCTCAATGTGTACGACCTGACGCACATTAATGGCTACGCATATTGGCTCGGCCTCGGAGTTTATCATTCTGGTGTACAAGGTTCGTTCTAATTCGAGCTTTTCAATTCTTCTTCGTCTAATTCATCGGTTTATCTGCTGGAATTTGCTGTTAGATCTGCATTTTTTATGCTTAATCTGCTGGAATCCACTTTTGATGAGTTCTGTTTCTGTTTGGTTAGTGAGAAAATGGGGGGAAATTGATTGAACTTCTAGGTTTTTGCTTTCTGTTTACTTGTTTATTGTTCTTGTAAGTCGGATTTTACTCCTGTGAAAACTTTCCCGATGTTTTCTGGACCTGCATTTTGATGGATTCTGTTTGGATGGTGAGAAAATGATGGAAAATTAGACGAACTTCTAGGTTTTTACATTTAGTACTCTCGTTTGTTGTCTTCAAGTATAATTTGCTCTGTTTGTGACCTCCATTTTGACGGAATCTGTTTGGATGGTGAGAAAATGGAAGAAAATTGGACGAACATGGAGGATTTTACTTTTAGTTCACTTGTTGATTGTTCTTGAACTATAATTTACTTTTGGAGAATCTTTCCTGGTGTTTTCTGGACCTTCATTGTTGTGTTTGGCTGCTGAGAAAATGAAGGAAAATTGAATGAAGTCTGGTCTAGGAAAATCTATTCTGCCATTTTTTATCTGAAACTGAGAAATCTATGGGATTCTGATGCAGTTCATGGAATTGAATTTGCATTTGGGGCTCATGAGTATCCAAGTACAGGGATATTTGAAGGGGAACCGAAGCAATGTGATGGATTCAAGTTCAGAGAATCAATTTTGATTGGGAAAACAGATATGAGTGAAGCAGAAGTGAGGTCATTAATGGAGGAACTTGGTAAAGATTACAGAGGAAATGCATATAATCTCATCACCAAAAATTGCAACCATTTTTGCAACCATGTTTGCATCAAACTCACTGGAAATCCCATCCCAAATTGGGTCAATCGCCTCGCTAGAATTGGTAAATTTTGATCTAAATTTACTTTCCTTTTCTAGTTCTTGCTGCTACTGTTTCTCCTTGAATGCTGATGATGAGCTTGACTACTTTTGTTAATAGAAAATTATTTTGATCCTTTTTTTCTTAAACTAGTTTACAAAAAGTTGCTTGAAATATTCTCTACTCATTTAAGTGGTAGGTATAGAGTTTCATAACAAATTTAAGTGGTAGGTGGCTTGATATCATTTAGTTTTTTTTTTTTTTTTCATTCTTTCTTTTTGAAAATTTTGTTGGTTTGCTCAATGGTTTTCTGCGACCAAATTTCAAAAACAAGTTTACATTTTTTGGTATGAATTTTTGAAAATATTGATGATAAAACATAAAAAAATCAAACGACTATGAAGAAAATAAAATGATTAATGAAAATTAAACGAAAATGATCCTATATAGATGATGTGAGAACCCAGGTTAGTTGATGAAGGGAACGCATTTCTTATAAGGGTGCAGATCCTCTCCCTAATATATAGCATTTTAGAACCTTGAGGGGAAGCCTAGAAGTAGAAGCTCAAAGAGGACAATATCTGTTAGCGGTGGGCTTGGACCATTACAAATGGTATCAAAGCTAGACACCGGGGTGTGTGCCAACCCACATAGGTTGGAGAGGGGAACGAAACCTTTCTTATAATGGTGTGAAAACCTCTCCTTAAACGCGTTTTAAAACTTTGAGTGAAAGCTCAACGAAGACAACACTTACTAGTGGTAGGTTGAGCTATTATAAATTCGAATCTTCTAATATGTATGTGTCATGGATTGTGTTGAATGTTTGTGTTTGTGAAGAACTTCTGAGATGAGGGGTTTTGGAATGCAGGGTGGATATGCAACTGTGTTTTACCAGCAACCTTAAACTCCACGAAATTTGGACAAAACAGAGCGCAAAAGAAGAGAGGTGAAGAAAAACAAGAAGAAGAAGAAGAAGAGAAGAAGAAGAAGGAATTGGCAAGAAGAATCCAAACAGCTGAAATTTCAGCTTCTAATTCTTCATCTTCTTCAACTACTACTCTCCGCAGAGGAAGAAGCAGAACCAGACGTCCTCGTCTTCCAGCTTCACCATTGATACCCACTTCAAGTTCTTGAAGATTGTTATTTTACTAATTCCCCCTCTAAATTATATCTCTCTCTCTAAAAAAAAAAAAGGCATTCTTGGGGGGTATATCAGTGATTATGTAAATTGTGTATTATTAGGCAAAGTGGGCTGTTTTTTCTCTCTCTGCAATGTTTTTTCCCCACCATTAATGATTCCCATTTTCTTGGATTTTCTTGAGCTCCCATTGAAGTTCTTACAGGCTGGGTTTAATTTCCAGGTGAGATGTGGATTGGAATTCAAATTTTGATGAAATTGCTTAATGGGGCATATTCATTTTCTTAGTAGCAAATATGACCTCCGGAATGCTCTATAGAGTCGAC TTTTTCCGCCCCTTTTTTGTTTATGTTTCCGATGTTAATTTTCTATTTGGTTCGAGGATATTTAGCAATGGAGTTGTTATTAATCGCAGTAAGCGAGTGGGAGTGAGATCGAAATGTGGTGCAGAAGAATCTCCTGCAATGGCGACTCTGGATCGGTGCCAGTGTACCTCAATGTGTACGACCTGACGCACATTAATGGCTACGCATATTGGCTCGGCCTCGGAGTTTATCATTCTGGTGTACAAGTTCATGGAATTGAATTTGCATTTGGGGCTCATGAGTATCCAAGTACAGGGATATTTGAAGGGGAACCGAAGCAATGTGATGGATTCAAGTTCAGAGAATCAATTTTGATTGGGAAAACAGATATGAGTGAAGCAGAAGTGAGGTCATTAATGGAGGAACTTGGTAAAGATTACAGAGGAAATGCATATAATCTCATCACCAAAAATTGCAACCATTTTTGCAACCATGTTTGCATCAAACTCACTGGAAATCCCATCCCAAATTGGGTCAATCGCCTCGCTAGAATTGGGTGGATATGCAACTGTGTTTTACCAGCAACCTTAAACTCCACGAAATTTGGACAAAACAGAGCGCAAAAGAAGAGAGGTGAAGAAAAACAAGAAGAAGAAGAAGAAGAGAAGAAGAAGAAGGAATTGGCAAGAAGAATCCAAACAGCTGAAATTTCAGCTTCTAATTCTTCATCTTCTTCAACTACTACTCTCCGCAGAGGAAGAAGCAGAACCAGACGTCCTCGTCTTCCAGCTTCACCATTGATACCCACTTCAAGTTCTTGAAGATTGTTATTTTACTAATTCCCCCTCTAAATTATATCTCTCTCTCTAAAAAAAAAAAAGGCATTCTTGGGGGGTATATCAGTGATTATGTAAATTGTGTATTATTAGGCAAAGTGGGCTGTTTTTTCTCTCTCTGCAATGTTTTTTCCCCACCATTAATGATTCCCATTTTCTTGGATTTTCTTGAGCTCCCATTGAAGTTCTTACAGGCTGGGTTTAATTTCCAGGTGAGATGTGGATTGGAATTCAAATTTTGATGAAATTGCTTAATGGGGCATATTCATTTTCTTAGTAGCAAATATGACCTCCGGAATGCTCTATAGAGTCGAC ATGTGGTGCAGAAGAATCTCCTGCAATGGCGACTCTGGATCGGTGCCAGTGTACCTCAATGTGTACGACCTGACGCACATTAATGGCTACGCATATTGGCTCGGCCTCGGAGTTTATCATTCTGGTGTACAAGTTCATGGAATTGAATTTGCATTTGGGGCTCATGAGTATCCAAGTACAGGGATATTTGAAGGGGAACCGAAGCAATGTGATGGATTCAAGTTCAGAGAATCAATTTTGATTGGGAAAACAGATATGAGTGAAGCAGAAGTGAGGTCATTAATGGAGGAACTTGGTAAAGATTACAGAGGAAATGCATATAATCTCATCACCAAAAATTGCAACCATTTTTGCAACCATGTTTGCATCAAACTCACTGGAAATCCCATCCCAAATTGGGTCAATCGCCTCGCTAGAATTGGGTGGATATGCAACTGTGTTTTACCAGCAACCTTAAACTCCACGAAATTTGGACAAAACAGAGCGCAAAAGAAGAGAGGTGAAGAAAAACAAGAAGAAGAAGAAGAAGAGAAGAAGAAGAAGGAATTGGCAAGAAGAATCCAAACAGCTGAAATTTCAGCTTCTAATTCTTCATCTTCTTCAACTACTACTCTCCGCAGAGGAAGAAGCAGAACCAGACGTCCTCGTCTTCCAGCTTCACCATTGATACCCACTTCAAGTTCTTGA MWCRRISCNGDSGSVPVYLNVYDLTHINGYAYWLGLGVYHSGVQVHGIEFAFGAHEYPSTGIFEGEPKQCDGFKFRESILIGKTDMSEAEVRSLMEELGKDYRGNAYNLITKNCNHFCNHVCIKLTGNPIPNWVNRLARIGWICNCVLPATLNSTKFGQNRAQKKRGEEKQEEEEEEKKKKELARRIQTAEISASNSSSSSTTTLRRGRSRTRRPRLPASPLIPTSSS Homology
BLAST of CmoCh14G014180 vs. ExPASy Swiss-Prot
Match: Q93VG8 (DeSI-like protein At4g17486 OS=Arabidopsis thaliana OX=3702 GN=At4g17486 PE=2 SV=1) HSP 1 Score: 198.0 bits (502), Expect = 1.2e-49 Identity = 86/174 (49.43%), Postives = 121/174 (69.54%), Query Frame = 0
BLAST of CmoCh14G014180 vs. ExPASy Swiss-Prot
Match: Q5PQ09 (Deubiquitinase DESI2 OS=Xenopus laevis OX=8355 GN=desi2 PE=2 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 2.6e-33 Identity = 85/198 (42.93%), Postives = 117/198 (59.09%), Query Frame = 0
BLAST of CmoCh14G014180 vs. ExPASy Swiss-Prot
Match: Q6DC39 (Deubiquitinase DESI2 OS=Danio rerio OX=7955 GN=desi2 PE=2 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 2.9e-32 Identity = 71/167 (42.51%), Postives = 109/167 (65.27%), Query Frame = 0
BLAST of CmoCh14G014180 vs. ExPASy Swiss-Prot
Match: H2KZK4 (Desumoylating isopeptidase 1 homolog OS=Caenorhabditis elegans OX=6239 GN=F36D4.5 PE=2 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 3.6e-30 Identity = 74/202 (36.63%), Postives = 120/202 (59.41%), Query Frame = 0
BLAST of CmoCh14G014180 vs. ExPASy Swiss-Prot
Match: Q5ZIV7 (Deubiquitinase DESI2 OS=Gallus gallus OX=9031 GN=DESI2 PE=2 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 1.0e-29 Identity = 80/199 (40.20%), Postives = 117/199 (58.79%), Query Frame = 0
BLAST of CmoCh14G014180 vs. ExPASy TrEMBL
Match: A0A6J1GTY9 (deSI-like protein At4g17486 OS=Cucurbita moschata OX=3662 GN=LOC111457516 PE=3 SV=1) HSP 1 Score: 459.5 bits (1181), Expect = 8.0e-126 Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0
BLAST of CmoCh14G014180 vs. ExPASy TrEMBL
Match: A0A6J1J0C0 (deSI-like protein At4g17486 OS=Cucurbita maxima OX=3661 GN=LOC111480086 PE=3 SV=1) HSP 1 Score: 440.7 bits (1132), Expect = 3.8e-120 Identity = 224/232 (96.55%), Postives = 225/232 (96.98%), Query Frame = 0
BLAST of CmoCh14G014180 vs. ExPASy TrEMBL
Match: A0A0A0KX01 (PPPDE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G006490 PE=3 SV=1) HSP 1 Score: 396.4 bits (1017), Expect = 8.3e-107 Identity = 200/235 (85.11%), Postives = 213/235 (90.64%), Query Frame = 0
BLAST of CmoCh14G014180 vs. ExPASy TrEMBL
Match: A0A1S3BXH1 (deSI-like protein At4g17486 OS=Cucumis melo OX=3656 GN=LOC103494655 PE=3 SV=1) HSP 1 Score: 388.7 bits (997), Expect = 1.7e-104 Identity = 196/234 (83.76%), Postives = 213/234 (91.03%), Query Frame = 0
BLAST of CmoCh14G014180 vs. ExPASy TrEMBL
Match: A0A6J1DIV3 (deSI-like protein At4g17486 OS=Momordica charantia OX=3673 GN=LOC111020936 PE=3 SV=1) HSP 1 Score: 384.8 bits (987), Expect = 2.5e-103 Identity = 199/231 (86.15%), Postives = 209/231 (90.48%), Query Frame = 0
BLAST of CmoCh14G014180 vs. NCBI nr
Match: XP_022955511.1 (deSI-like protein At4g17486 [Cucurbita moschata]) HSP 1 Score: 459.5 bits (1181), Expect = 1.7e-125 Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0
BLAST of CmoCh14G014180 vs. NCBI nr
Match: KAG6581964.1 (DeSI-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 447.6 bits (1150), Expect = 6.5e-122 Identity = 227/233 (97.42%), Postives = 227/233 (97.42%), Query Frame = 0
BLAST of CmoCh14G014180 vs. NCBI nr
Match: XP_023528854.1 (deSI-like protein At4g17486 [Cucurbita pepo subsp. pepo] >XP_023528855.1 deSI-like protein At4g17486 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 444.5 bits (1142), Expect = 5.5e-121 Identity = 223/230 (96.96%), Postives = 224/230 (97.39%), Query Frame = 0
BLAST of CmoCh14G014180 vs. NCBI nr
Match: XP_022980803.1 (deSI-like protein At4g17486 [Cucurbita maxima]) HSP 1 Score: 440.7 bits (1132), Expect = 7.9e-120 Identity = 224/232 (96.55%), Postives = 225/232 (96.98%), Query Frame = 0
BLAST of CmoCh14G014180 vs. NCBI nr
Match: KAG7018383.1 (DeSI-like protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 432.6 bits (1111), Expect = 2.2e-117 Identity = 228/265 (86.04%), Postives = 228/265 (86.04%), Query Frame = 0
BLAST of CmoCh14G014180 vs. TAIR 10
Match: AT1G80690.1 (PPPDE putative thiol peptidase family protein ) HSP 1 Score: 296.6 bits (758), Expect = 1.7e-80 Identity = 152/230 (66.09%), Postives = 181/230 (78.70%), Query Frame = 0
BLAST of CmoCh14G014180 vs. TAIR 10
Match: AT5G25170.1 (PPPDE putative thiol peptidase family protein ) HSP 1 Score: 243.0 bits (619), Expect = 2.3e-64 Identity = 130/226 (57.52%), Postives = 155/226 (68.58%), Query Frame = 0
BLAST of CmoCh14G014180 vs. TAIR 10
Match: AT4G31980.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158), Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT5G11290.1); Has 1967 Blast hits to 1844 proteins in 183 species: Archae - 0; Bacteria - 6; Metazoa - 223; Fungi - 83; Plants - 1477; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). ) HSP 1 Score: 236.1 bits (601), Expect = 2.8e-62 Identity = 123/227 (54.19%), Postives = 164/227 (72.25%), Query Frame = 0
BLAST of CmoCh14G014180 vs. TAIR 10
Match: AT2G25190.1 (PPPDE putative thiol peptidase family protein ) HSP 1 Score: 221.9 bits (564), Expect = 5.4e-58 Identity = 123/217 (56.68%), Postives = 147/217 (67.74%), Query Frame = 0
BLAST of CmoCh14G014180 vs. TAIR 10
Match: AT1G47740.1 (PPPDE putative thiol peptidase family protein ) HSP 1 Score: 201.4 bits (511), Expect = 7.5e-52 Identity = 99/199 (49.75%), Postives = 130/199 (65.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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