CmoCh14G014160 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh14G014160
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Transducin/WD40 repeat-like superfamily protein
Location	Cmo_Chr14: 11561697 .. 11566745 (-)
RNA-Seq Expression	CmoCh14G014160
Synteny	CmoCh14G014160

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTGCAACGTGCGTAAGTTTTGGAACTCGATTTCATTTGTAAATCAGTTCGATGCCTAGTTTGGTATGGTTTAAACTTAATTGTTGTGTTTCTTTTTGAATGCCTGTTTTTAGGTTGCTCAGCCTCCGAGTGATTCTGTGTCGAGCCTTAGTTTTAGTCCAAAGGCCAATCACTTGGTTGCCACTTCATGGGATAATCAGGTCCTTTTCTTTTTCCTCTTCTTTTCAACTCTTTTTGTGCTTTTACTTCCTTATTTAACCGTTTTGTTTATTTTCTATCCAGATTAGGGTTTACTTTTATGCGAATAAGAAAGTTTTGCTTGCTATTTTTACTTTTCTTCGAGGTTTTCTATCCAAATTAGCTATGAGAATGTCAAATTGATGTATAGTCTTCGAGGTCTGCGAGTTTATTCTATAATTTCATAGTAATGGCTCTGCAGGTTCGTTGTTGGGAAATAATGCAAAATGCGGGTAATGTTGCCAGTACGCCCAAGGCTTCTATATCTCACGATCAACCGGTATATAACAATTTAGTTTTGATTTTGTGGTTTGATTAGAATTTTGTTGCTGTAAGATCCAAAACGTTGCTAAGTTATCGTGCACATTAGGTTTTATGCTCAGCGTGGAAGGACGATGGAACAACTGTGTTTTCTGGAGGCTGCGACAAACAAGTTAAAATGTGGCCCTTGTTGTCCGGTGGCCAAGCCATGACTGTAGCCATGCATGAAGCACCTGTCAAAGAAGTTGCGTGGATCCCTGAGATGAGCCTATTAGTCTCTGGAAGCTGGGACAAGACATTGAAGTAAGCACCAATCTGTTGATTCTTAATTATCTTTAAGTAATTAAAACATGCGTTCTGTGACATCCATATATTCTTTTTAATATGCGTAGCACAGTTTCGCTATTAGAGCTCAGTTCATTATTGTGGAACACGAAAAACATTCTAGGAGTCAGTTTCAAACAATTTGTCTCACTAGCCTGTTTTGATGTCGTTTCATTCATCTATGATGTGGGCATCGTGTTTGTTCAAACTAAGGCACGTGTAAGCAAGATATGTGGCTCTGGCCTCTGCCTTTCTATGGCATGAGTTGATGTAGTATTGCTCCTTAATTTTTTCCTCAAATGGTTTCACTGTTTTATGTTTCTTCCTAAGATTAATTATGAATATGAGTGTGTATTTTGTTTTAACATAAAATTACATGTTGAACCATTTCAATTAGTCAGGTTTAAATGAAAGATGTTGCTGAAAATAAGTGGGTTCATATCCACTAAGCACCTGACTCTCCGTCTCTCTCTCTCTCTCTCTCTCTCTGATATTCTAGAACTTGCATCACTGCAGTCCCTAGTTACTATGATGAAAAATAGCAAATGCGCCCTGCCAAGGTAGACAATTTACCCTTTTCTGGTCTACATGTTCACCCTTTGCCTTTTGTTTTTCTACCATGTGGAAGTGTAATTGTAGATTGTGGTAGATTACCTATGTTTTCTAGTTATGATGAAAAGATTTGATGGGGTTCTATAAATTCTCAGGTATTGGGATACAAGGCAGCCAAACCCAGTGCATACACAACAACTTCCTGATCGCTGTTATTCAATGACAGTGAGATATCCACTAATGGTAGTTGGTACTGCAGACAGAAATCTGATAGTGTTTAACTTGCAAAATCCTCAGGTATTGTTTTTTTTTCCTCTCATTTCTTCTACAATGTAATATATGAAGTTGTGTATAATATTCTTTAAATTTCAGTTTTTGACATCTGCGTGTGGGGTCTTTCTGTGACAGAATGAATTTAAGAGAATTGTTTCACCCTTGAAGTATCAAACAAGATGTGTAGCTGCCTTTCCTGATCAGCAAGGTTTTTTGGTAATGTTTCCATCCCTTATATTCCTTTGTTTAGATGTTACTTGCTGTCAAGTATAATTCTTATATTATGTCTTGATGATATATATATATACTTTTTTGATAAGAGACTGTCTTGATGATATTTTAGTTACTACTACTTCCAGAATAAGAATCTACTTCCAGATTCTTATTTCTTTACAGGTTGATCTTACTGTGAAATTGCTTAATTTGAGTTCATTAACCATTCCAGGTTGGTTCAATTGAGGGAAGGGTTGGTGTTCATCACCTTGATGAGTCTTTGGCGAATAAGAATTTCACTTTTAAGTGCCACAGGGATGGATCTGAGATATATTCTGTCAACTCCTTGAACTTTCATCCCGTAAGTTTGTATTAAATTATTTATTTTTTGAAGCATAAATAAATCCAAGAAACTTCAAAACTACACAAATTCCCAATTTTTTTCTTTCTAGAAGAACTTTGGAAAATCAGAGGGGAGAAGTCTTCTCCAGCTTTTGAGCACTGCACTCATTTGAATTTAAAATTCGTTAAATAAAGGCACATGTATTGAAGCCTATTGTATATGTCTTCGCCCTTCAGAAACCCACATTGAGGCTTTTCATTTTACACAATACATTTACTACCTCCTTCAAGATCAAATTCTGGAATTTTCTACCTCCTCCAATCAAGTCGAGTGCCATCAATTAGCTGCAAAAGCTTTCAAGCTTCCTTCCCTTCCTCATCTCAAACTTGTACTCCAGTGATGATCATCCACCATGGATAGCTGGCACCTCCTGATCTTTTAGTTCTAGTATACTTCCCAAAATCTTCTTTTCCATTAATTCTAACCATCACTTTGTGCCCTTGCTTATTTGGCTCTCTGGAAATCTCTACACCGTTTGGATTCTTATTTTTTAAGCTCCTGACTCCTTAACTGTCACTACACACAAGCTTAGCAATCATGTTCCAACCAACTAATTAATTGACCTCTTCTCTTCATTTCCACTCCAAAGAAATACACCCAATCCATATTGGCATTTGGAAAATCGAATTGTAGTACTCAGGGAGGTTAGAAGGTACTGCATTACGTAATAATATCCTTCCACCCTAGACGAGCAAATTTTTTTTTTCATCTGTCAATTTTTCCTTGTGGTTTTTCCATAGTAGGAAGTTGGACCTCCGTTTTTATTTAATTTACCCCCAAAGACATAAGAAAAAGGAAGGCATTCTCACCTAGGATAGTGTACTGTTGTTGGCTATTTTTTAAGATGACAAGGATTTTTTCTGATTGGTGCGCTCATAAGTGATTATCTGCTACCAATTCGCCATAATTTGCAGCATCTTGATTAATGGTTCTTTAAATCTTGCTATTTATTGACCGGAACTTTCTTTCAGGTGCATCACACTTTTGCAACTGCAGGGTCAGATGGTGCCTTTAATTTCTGGGACAAGGATAGCAAACAGAGGCTGAAGGTGCATTCAATATATTTATTATACTTACAGCTACATAATCCTCTTTTGTCAGTCTTCTTCCATCTGTATAAAATAGCTTATGGTTGCATCGGAACTACGTTTAGAAAACTTGTTAGGTGGGAATAATGCTCAAAAACAAGTTGCTAACAAGTTTTTGGCTCAATTAATATTTTCATAATTTAACTTCATTTCCAGTTGTTAGCTTTACGAACAATCAGTATATTCATTTTTGAGAAGATTAAATTGAGTAAAAAACTAACGAGAAACTTAATATTCACCTATGTACTTGAATTAAATGAACCTGTGCAATACCTCCAACATCTAAATATTTTTTTGGGAGATAGTGCAGGTGTAGAGATCTATAATAACTTGAGAGCAGGGAAAAGGGAAAAAAAAAAAAAACTGCAAGAACATGTCTGCATACAACTTGTTCTAGTTTTACAATTAGTTCCTTCTATAGCAAATTATCTGTTCTGTTCTATTAATCAACACAGAACTCTTAAGTGTATGGCTTTTATGTGTCAGGTCACTACCTTTTCCTTCAATTTATTAACATCTAGAAAATATTTAGAGTATTCTTCTTAATGAATGAATGGTGAATGGTTATCTTTTTTGCTTTCAGGCTATGTTACGATGCAGTCAGCCCATAAGTAGTAGCACTTTCAACCAGGATGGGTCGATATTTGCATATTCAGTACGTATCACCTTAATTATTAATCTTTTAATTTTTTATCACTTGCTGATGCTTGCTTCTTTAAGTTGCACCACCTTCCCTCAAATGTTACGTGAGCACCTATCATAATCCATTATTTCCAACAACTATAGCAACGTGCATTTCATTTGAGGTATATCATAGTTTCGTTGCAAATAGACTTAATGGATTGAGTGTTCAGAAAATAGTAGATAAGCATTCCAAATAGCTCGGAAGTGGGGCCCAAGGGAGGGCTCTTGAATTTCTTATTATCCTTGAAGCCTTTTCTTTATTCCTACAATGTTTCTCTTTAAACTATAATGTTTCAACCAGTTCTAATTGAAAAGCTTTCAGACCCCAATATGTGCAAGTTGTATTAACGTTATACGCATGATATGGTACCCGTACTCCTTGAGACTGAAATCTCTTTCTAGCAAACAGCGGGAATACTTCTGTTCATAGTTTTAAAGAACGCTAGAAAGATATTATTTGACGTGAGCTGAACTCGACATGTGGGATTTCTATAGGTGTGCTATGATTGGAGTAAAGGGGCAGAAAATCACAACCCAGCAACAGCAAAGACTTGCATTTACTTGCACCTTCCACAGGTACTTGGTGTACATAATCTTTTTATTACCTTTTTTTCTCTGTTCTTATTTGGAATATCGTTGAAAACTGACTGAGAAATTTGCCTTTTGGTTGTAGGAGTCCGAGGTTAAAGGCAAGCCTCGGGTTGGGGGCAGCGGAAGAAAGTAGTCACTGTAAAATCGATTACATTTCCCCCCTTCGAATGTATCTTTATTCTTTAATGTCAAATTACTAATAGGTTAAACTAGGTTTGCAAAAATCTTGAATATATTTCTAGTTTAGAACGTCATGTATGGCTTTTTGTATGATTGGAAATACTGAATTTTCAAATACATAAGAGATCTACTGCCGTTGTTTTCCTTCGGCTAAGAAACTGTAATTTTTACCAAGTTGATAACCAGTGGTGATGTTTTTAGCGAGGTTGAACAGTTTTGTTTTAATTTGAAGCACATTGC

mRNA sequence

ATGTGTGCAACGTGCGTTGCTCAGCCTCCGAGTGATTCTGTGTCGAGCCTTAGTTTTAGTCCAAAGGCCAATCACTTGGTTGCCACTTCATGGGATAATCAGGTTCGTTGTTGGGAAATAATGCAAAATGCGGGTAATGTTGCCAGTACGCCCAAGGCTTCTATATCTCACGATCAACCGGTTTTATGCTCAGCGTGGAAGGACGATGGAACAACTGTGTTTTCTGGAGGCTGCGACAAACAAGTTAAAATGTGGCCCTTGTTGTCCGGTGGCCAAGCCATGACTGTAGCCATGCATGAAGCACCTGTCAAAGAAGTTGCGTGGATCCCTGAGATGAGCCTATTAGTCTCTGGAAGCTGGGACAAGACATTGAAGTATTGGGATACAAGGCAGCCAAACCCAGTGCATACACAACAACTTCCTGATCGCTGTTATTCAATGACAGTGAGATATCCACTAATGGTAGTTGGTACTGCAGACAGAAATCTGATAGTGTTTAACTTGCAAAATCCTCAGAATGAATTTAAGAGAATTGTTTCACCCTTGAAGTATCAAACAAGATGTGTAGCTGCCTTTCCTGATCAGCAAGGTTTTTTGGTTGGTTCAATTGAGGGAAGGGTTGGTGTTCATCACCTTGATGAGTCTTTGGCGAATAAGAATTTCACTTTTAAGTGCCACAGGGATGGATCTGAGATATATTCTGTCAACTCCTTGAACTTTCATCCCGTGCATCACACTTTTGCAACTGCAGGGTCAGATGGTGCCTTTAATTTCTGGGACAAGGATAGCAAACAGAGGCTGAAGGCTATGTTACGATGCAGTCAGCCCATAAGTAGTAGCACTTTCAACCAGGATGGGTCGATATTTGCATATTCAGTGTGCTATGATTGGAGTAAAGGGGCAGAAAATCACAACCCAGCAACAGCAAAGACTTGCATTTACTTGCACCTTCCACAGGAGTCCGAGGTTAAAGGCAAGCCTCGGGTTGGGGGCAGCGGAAGAAAGTAGTCACTGTAAAATCGATTACATTTCCCCCCTTCGAATGTATCTTTATTCTTTAATGTCAAATTACTAATAGGTTAAACTAGGTTTGCAAAAATCTTGAATATATTTCTAGTTTAGAACGTCATGTATGGCTTTTTGTATGATTGGAAATACTGAATTTTCAAATACATAAGAGATCTACTGCCGTTGTTTTCCTTCGGCTAAGAAACTGTAATTTTTACCAAGTTGATAACCAGTGGTGATGTTTTTAGCGAGGTTGAACAGTTTTGTTTTAATTTGAAGCACATTGC

Coding sequence (CDS)

ATGTGTGCAACGTGCGTTGCTCAGCCTCCGAGTGATTCTGTGTCGAGCCTTAGTTTTAGTCCAAAGGCCAATCACTTGGTTGCCACTTCATGGGATAATCAGGTTCGTTGTTGGGAAATAATGCAAAATGCGGGTAATGTTGCCAGTACGCCCAAGGCTTCTATATCTCACGATCAACCGGTTTTATGCTCAGCGTGGAAGGACGATGGAACAACTGTGTTTTCTGGAGGCTGCGACAAACAAGTTAAAATGTGGCCCTTGTTGTCCGGTGGCCAAGCCATGACTGTAGCCATGCATGAAGCACCTGTCAAAGAAGTTGCGTGGATCCCTGAGATGAGCCTATTAGTCTCTGGAAGCTGGGACAAGACATTGAAGTATTGGGATACAAGGCAGCCAAACCCAGTGCATACACAACAACTTCCTGATCGCTGTTATTCAATGACAGTGAGATATCCACTAATGGTAGTTGGTACTGCAGACAGAAATCTGATAGTGTTTAACTTGCAAAATCCTCAGAATGAATTTAAGAGAATTGTTTCACCCTTGAAGTATCAAACAAGATGTGTAGCTGCCTTTCCTGATCAGCAAGGTTTTTTGGTTGGTTCAATTGAGGGAAGGGTTGGTGTTCATCACCTTGATGAGTCTTTGGCGAATAAGAATTTCACTTTTAAGTGCCACAGGGATGGATCTGAGATATATTCTGTCAACTCCTTGAACTTTCATCCCGTGCATCACACTTTTGCAACTGCAGGGTCAGATGGTGCCTTTAATTTCTGGGACAAGGATAGCAAACAGAGGCTGAAGGCTATGTTACGATGCAGTCAGCCCATAAGTAGTAGCACTTTCAACCAGGATGGGTCGATATTTGCATATTCAGTGTGCTATGATTGGAGTAAAGGGGCAGAAAATCACAACCCAGCAACAGCAAAGACTTGCATTTACTTGCACCTTCCACAGGAGTCCGAGGTTAAAGGCAAGCCTCGGGTTGGGGGCAGCGGAAGAAAGTAG

Protein sequence

MCATCVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTPKASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLVSGSWDKTLKYWDTRQPNPVHTQQLPDRCYSMTVRYPLMVVGTADRNLIVFNLQNPQNEFKRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDESLANKNFTFKCHRDGSEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMLRCSQPISSSTFNQDGSIFAYSVCYDWSKGAENHNPATAKTCIYLHLPQESEVKGKPRVGGSGRK

Homology

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BLAST of CmoCh14G014160 vs. ExPASy Swiss-Prot
Match: Q38942 (Protein RAE1 OS=Arabidopsis thaliana OX=3702 GN=RAE1 PE=1 SV=2)

HSP 1 Score: 591.7 bits (1524), Expect = 5.4e-168
Identity = 270/330 (81.82%), Postives = 300/330 (90.91%), Query Frame = 0


Query: 6   VAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTPKASISHDQPVLCSA 65
           V   P+DS+SSLSFSP+A+ LVATSWDNQVRCWEI ++  ++AS PKASISHDQPVLCSA
Sbjct: 20  VTPSPADSISSLSFSPRADILVATSWDNQVRCWEISRSGASLASAPKASISHDQPVLCSA 79

Query: 66  WKDDGTTVFSGGCDKQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLVSGSWDKTLK 125
           WKDDGTTVFSGGCDKQ KMWPLLSGGQ +TVAMHE P+  +AWIP M+LL +GSWDKTLK
Sbjct: 80  WKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIPGMNLLATGSWDKTLK 139

Query: 126 YWDTRQPNPVHTQQLPDRCYSMTVRYPLMVVGTADRNLIVFNLQNPQNEFKRIVSPLKYQ 185
           YWDTRQ NPVHTQQLPD+CY+++V++PLMVVGTADRNLIVFNLQNPQ EFKRI SPLKYQ
Sbjct: 140 YWDTRQQNPVHTQQLPDKCYTLSVKHPLMVVGTADRNLIVFNLQNPQTEFKRIQSPLKYQ 199

Query: 186 TRCVAAFPDQQGFLVGSIEGRVGVHHLDESLANKNFTFKCHRDGSEIYSVNSLNFHPVHH 245
           TRCV AFPDQQGFLVGSIEGRVGVHHLD+S  +KNFTFKCHRDG++IYSVNSLNFHPVH 
Sbjct: 200 TRCVTAFPDQQGFLVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGNDIYSVNSLNFHPVHG 259

Query: 246 TFATAGSDGAFNFWDKDSKQRLKAMLRCSQPISSSTFNQDGSIFAYSVCYDWSKGAENHN 305
           TFATAGSDGAFNFWDKDSKQRLKAM RC+QPI  S+FN DGSI+AY+ CYDWSKGAENHN
Sbjct: 260 TFATAGSDGAFNFWDKDSKQRLKAMSRCNQPIPCSSFNHDGSIYAYAACYDWSKGAENHN 319

Query: 306 PATAKTCIYLHLPQESEVKGKPRVGGSGRK 336
           PATAK+ I+LHLPQESEVK KPRVG +GRK
Sbjct: 320 PATAKSSIFLHLPQESEVKAKPRVGATGRK 349

[Close]

BLAST of CmoCh14G014160 vs. ExPASy Swiss-Prot
Match: Q5FVA9 (mRNA export factor OS=Xenopus tropicalis OX=8364 GN=rae1 PE=2 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 1.1e-93
Identity = 169/338 (50.00%), Postives = 220/338 (65.09%), Query Frame = 0


Query: 6   VAQPPSDSVSSLSFSP---KANHLVATSWDNQVRCWEIMQNAGNVASTPKASISHDQPVL 65
           V  PP DS+S LSFSP     N L+A SW N VRCWE+  N   +   PKA   H  PVL
Sbjct: 34  VTSPPDDSISCLSFSPPTLPGNFLIAGSWANDVRCWEVQDNGQTI---PKAQQMHTGPVL 93

Query: 66  CSAWKDDGTTVFSGGCDKQVKMWPLLSGGQAMTVAMHEAPVKEVAWI--PEMSLLVSGSW 125
              W DDG+ VF+  CDK  KMW  L+  Q++ +A H+AP+K V W+  P  S +++GSW
Sbjct: 94  DVCWSDDGSKVFTASCDKTAKMWD-LNSNQSIQIAQHDAPIKTVHWVKAPNYSCIMTGSW 153

Query: 126 DKTLKYWDTRQPNPVHTQQLPDRCYSMTVRYPLMVVGTADRNLIVFNLQNPQNEFKRIVS 185
           DK+LK+WDTR PNP+ T QLP+RCY   V YP+ VV TA+R LIV+ L+N  +EF+RI S
Sbjct: 154 DKSLKFWDTRSPNPLLTLQLPERCYCADVVYPMAVVATAERGLIVYQLENQPSEFRRIDS 213

Query: 186 PLKYQTRCVAAFPDQQ----GFLVGSIEGRVGVHHLD-ESLANKNFTFKCHRDG------ 245
           PLK+Q RCVA F D+Q    GF +GSIEGRV +H+++  + A  NFTFKCHR        
Sbjct: 214 PLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTTA 273

Query: 246 -SEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMLRCSQPISSSTFNQDGSI 305
             +IY+VN + FHPVH T AT GSDG F+FWDKD++ +LK   +  QPIS+ +FN +G+I
Sbjct: 274 PQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACSFNHNGNI 333

Query: 306 FAYSVCYDWSKGAENHNPATAKTCIYLHLPQESEVKGK 327
           FAYS  YDWSKG E +NP         +  +E + + K
Sbjct: 334 FAYSSSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRNK 367

[Close]

BLAST of CmoCh14G014160 vs. ExPASy Swiss-Prot
Match: Q7ZWF0 (mRNA export factor OS=Danio rerio OX=7955 GN=rae1 PE=2 SV=2)

HSP 1 Score: 340.9 bits (873), Expect = 1.6e-92
Identity = 165/338 (48.82%), Postives = 219/338 (64.79%), Query Frame = 0


Query: 6   VAQPPSDSVSSLSFSP---KANHLVATSWDNQVRCWEIMQNAGNVASTPKASISHDQPVL 65
           V  PP DS+S L+FSP     N L+  SW N VRCWE+  N   V   PKA   H  PVL
Sbjct: 34  VTSPPDDSISCLAFSPPTMPGNFLIGGSWANDVRCWEVQDNGQTV---PKAQQMHTGPVL 93

Query: 66  CSAWKDDGTTVFSGGCDKQVKMWPLLSGGQAMTVAMHEAPVKEVAWI--PEMSLLVSGSW 125
              W DDG+ VF+  CDK  KMW  L+  QA+ +A HE P++ + WI  P  S +++GSW
Sbjct: 94  DVCWSDDGSKVFTASCDKTAKMWD-LNSNQAIQIAQHEGPIRTIHWIKAPNYSCIMTGSW 153

Query: 126 DKTLKYWDTRQPNPVHTQQLPDRCYSMTVRYPLMVVGTADRNLIVFNLQNPQNEFKRIVS 185
           DKTLK+WDTR PNP+ + Q+P+RCY   V YP+ VV TA+R LIV+ L+N  +EF+RI S
Sbjct: 154 DKTLKFWDTRSPNPMMSLQMPERCYCADVVYPMAVVATAERGLIVYQLENQPSEFRRIES 213

Query: 186 PLKYQTRCVAAFPDQQ----GFLVGSIEGRVGVHHLD-ESLANKNFTFKCHRDG------ 245
           PLK+Q RCVA F D+Q    GF +GSIEGRV +H+++  + A  NFTFKCHR        
Sbjct: 214 PLKHQHRCVAIFKDKQSKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTAT 273

Query: 246 -SEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMLRCSQPISSSTFNQDGSI 305
             +IY+VN+++FHPVH T AT GSDG F+FWDKD++ +LK   +  QPI++  FN +G+I
Sbjct: 274 PQDIYAVNAISFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPITACCFNHNGNI 333

Query: 306 FAYSVCYDWSKGAENHNPATAKTCIYLHLPQESEVKGK 327
           FAY+  YDWSKG E +NP         +  +E + + K
Sbjct: 334 FAYASSYDWSKGHEYYNPQKKNYIFLRNAAEELKPRNK 367

[Close]

BLAST of CmoCh14G014160 vs. ExPASy Swiss-Prot
Match: P78406 (mRNA export factor OS=Homo sapiens OX=9606 GN=RAE1 PE=1 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 6.9e-91
Identity = 169/338 (50.00%), Postives = 218/338 (64.50%), Query Frame = 0


Query: 6   VAQPPSDSVSSLSFSP---KANHLVATSWDNQVRCWEIMQNAGNVASTPKASISHDQPVL 65
           V   P DS+  LSFSP     N L+A SW N VRCWE+ Q++G   + PKA   H  PVL
Sbjct: 34  VTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEV-QDSGQ--TIPKAQQMHTGPVL 93

Query: 66  CSAWKDDGTTVFSGGCDKQVKMWPLLSGGQAMTVAMHEAPVKEVAWI--PEMSLLVSGSW 125
              W DDG+ VF+  CDK  KMW  LS  QA+ +A H+APVK + WI  P  S +++GSW
Sbjct: 94  DVCWSDDGSKVFTASCDKTAKMWD-LSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSW 153

Query: 126 DKTLKYWDTRQPNPVHTQQLPDRCYSMTVRYPLMVVGTADRNLIVFNLQNPQNEFKRIVS 185
           DKTLK+WDTR  NP+   QLP+RCY   V YP+ VV TA+R LIV+ L+N  +EF+RI S
Sbjct: 154 DKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIES 213

Query: 186 PLKYQTRCVAAFPDQQ----GFLVGSIEGRVGVHHLD-ESLANKNFTFKCHRDG------ 245
           PLK+Q RCVA F D+Q    GF +GSIEGRV +H+++  + A  NFTFKCHR        
Sbjct: 214 PLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSA 273

Query: 246 -SEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMLRCSQPISSSTFNQDGSI 305
             +IY+VN + FHPVH T AT GSDG F+FWDKD++ +LK   +  QPIS+  FN +G+I
Sbjct: 274 PQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNI 333

Query: 306 FAYSVCYDWSKGAENHNPATAKTCIYLHLPQESEVKGK 327
           FAY+  YDWSKG E +NP         +  +E + + K
Sbjct: 334 FAYASSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRNK 367

[Close]

BLAST of CmoCh14G014160 vs. ExPASy Swiss-Prot
Match: Q5RF99 (mRNA export factor OS=Pongo abelii OX=9601 GN=RAE1 PE=2 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 6.9e-91
Identity = 169/338 (50.00%), Postives = 218/338 (64.50%), Query Frame = 0


Query: 6   VAQPPSDSVSSLSFSP---KANHLVATSWDNQVRCWEIMQNAGNVASTPKASISHDQPVL 65
           V   P DS+  LSFSP     N L+A SW N VRCWE+ Q++G   + PKA   H  PVL
Sbjct: 34  VTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEV-QDSGQ--TIPKAQQMHTGPVL 93

Query: 66  CSAWKDDGTTVFSGGCDKQVKMWPLLSGGQAMTVAMHEAPVKEVAWI--PEMSLLVSGSW 125
              W DDG+ VF+  CDK  KMW  LS  QA+ +A H+APVK + WI  P  S +++GSW
Sbjct: 94  DVCWSDDGSKVFTASCDKTAKMWD-LSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSW 153

Query: 126 DKTLKYWDTRQPNPVHTQQLPDRCYSMTVRYPLMVVGTADRNLIVFNLQNPQNEFKRIVS 185
           DKTLK+WDTR  NP+   QLP+RCY   V YP+ VV TA+R LIV+ L+N  +EF+RI S
Sbjct: 154 DKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIES 213

Query: 186 PLKYQTRCVAAFPDQQ----GFLVGSIEGRVGVHHLD-ESLANKNFTFKCHRDG------ 245
           PLK+Q RCVA F D+Q    GF +GSIEGRV +H+++  + A  NFTFKCHR        
Sbjct: 214 PLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSA 273

Query: 246 -SEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMLRCSQPISSSTFNQDGSI 305
             +IY+VN + FHPVH T AT GSDG F+FWDKD++ +LK   +  QPIS+  FN +G+I
Sbjct: 274 PQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNI 333

Query: 306 FAYSVCYDWSKGAENHNPATAKTCIYLHLPQESEVKGK 327
           FAY+  YDWSKG E +NP         +  +E + + K
Sbjct: 334 FAYASSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRNK 367

[Close]

BLAST of CmoCh14G014160 vs. ExPASy TrEMBL
Match: A0A6J1ITM9 (protein RAE1-like OS=Cucurbita maxima OX=3661 GN=LOC111479843 PE=4 SV=1)

HSP 1 Score: 699.5 bits (1804), Expect = 6.7e-198
Identity = 330/330 (100.00%), Postives = 330/330 (100.00%), Query Frame = 0


Query: 6   VAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTPKASISHDQPVLCSA 65
           VAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTPKASISHDQPVLCSA
Sbjct: 15  VAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTPKASISHDQPVLCSA 74

Query: 66  WKDDGTTVFSGGCDKQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLVSGSWDKTLK 125
           WKDDGTTVFSGGCDKQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLVSGSWDKTLK
Sbjct: 75  WKDDGTTVFSGGCDKQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLVSGSWDKTLK 134

Query: 126 YWDTRQPNPVHTQQLPDRCYSMTVRYPLMVVGTADRNLIVFNLQNPQNEFKRIVSPLKYQ 185
           YWDTRQPNPVHTQQLPDRCYSMTVRYPLMVVGTADRNLIVFNLQNPQNEFKRIVSPLKYQ
Sbjct: 135 YWDTRQPNPVHTQQLPDRCYSMTVRYPLMVVGTADRNLIVFNLQNPQNEFKRIVSPLKYQ 194

Query: 186 TRCVAAFPDQQGFLVGSIEGRVGVHHLDESLANKNFTFKCHRDGSEIYSVNSLNFHPVHH 245
           TRCVAAFPDQQGFLVGSIEGRVGVHHLDESLANKNFTFKCHRDGSEIYSVNSLNFHPVHH
Sbjct: 195 TRCVAAFPDQQGFLVGSIEGRVGVHHLDESLANKNFTFKCHRDGSEIYSVNSLNFHPVHH 254

Query: 246 TFATAGSDGAFNFWDKDSKQRLKAMLRCSQPISSSTFNQDGSIFAYSVCYDWSKGAENHN 305
           TFATAGSDGAFNFWDKDSKQRLKAMLRCSQPISSSTFNQDGSIFAYSVCYDWSKGAENHN
Sbjct: 255 TFATAGSDGAFNFWDKDSKQRLKAMLRCSQPISSSTFNQDGSIFAYSVCYDWSKGAENHN 314

Query: 306 PATAKTCIYLHLPQESEVKGKPRVGGSGRK 336
           PATAKTCIYLHLPQESEVKGKPRVGGSGRK
Sbjct: 315 PATAKTCIYLHLPQESEVKGKPRVGGSGRK 344

[Close]

BLAST of CmoCh14G014160 vs. ExPASy TrEMBL
Match: A0A6J1GU54 (protein RAE1-like OS=Cucurbita moschata OX=3662 GN=LOC111457513 PE=4 SV=1)

HSP 1 Score: 699.5 bits (1804), Expect = 6.7e-198
Identity = 330/330 (100.00%), Postives = 330/330 (100.00%), Query Frame = 0


Query: 6   VAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTPKASISHDQPVLCSA 65
           VAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTPKASISHDQPVLCSA
Sbjct: 15  VAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTPKASISHDQPVLCSA 74

Query: 66  WKDDGTTVFSGGCDKQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLVSGSWDKTLK 125
           WKDDGTTVFSGGCDKQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLVSGSWDKTLK
Sbjct: 75  WKDDGTTVFSGGCDKQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLVSGSWDKTLK 134

Query: 126 YWDTRQPNPVHTQQLPDRCYSMTVRYPLMVVGTADRNLIVFNLQNPQNEFKRIVSPLKYQ 185
           YWDTRQPNPVHTQQLPDRCYSMTVRYPLMVVGTADRNLIVFNLQNPQNEFKRIVSPLKYQ
Sbjct: 135 YWDTRQPNPVHTQQLPDRCYSMTVRYPLMVVGTADRNLIVFNLQNPQNEFKRIVSPLKYQ 194

Query: 186 TRCVAAFPDQQGFLVGSIEGRVGVHHLDESLANKNFTFKCHRDGSEIYSVNSLNFHPVHH 245
           TRCVAAFPDQQGFLVGSIEGRVGVHHLDESLANKNFTFKCHRDGSEIYSVNSLNFHPVHH
Sbjct: 195 TRCVAAFPDQQGFLVGSIEGRVGVHHLDESLANKNFTFKCHRDGSEIYSVNSLNFHPVHH 254

Query: 246 TFATAGSDGAFNFWDKDSKQRLKAMLRCSQPISSSTFNQDGSIFAYSVCYDWSKGAENHN 305
           TFATAGSDGAFNFWDKDSKQRLKAMLRCSQPISSSTFNQDGSIFAYSVCYDWSKGAENHN
Sbjct: 255 TFATAGSDGAFNFWDKDSKQRLKAMLRCSQPISSSTFNQDGSIFAYSVCYDWSKGAENHN 314

Query: 306 PATAKTCIYLHLPQESEVKGKPRVGGSGRK 336
           PATAKTCIYLHLPQESEVKGKPRVGGSGRK
Sbjct: 315 PATAKTCIYLHLPQESEVKGKPRVGGSGRK 344

[Close]

BLAST of CmoCh14G014160 vs. ExPASy TrEMBL
Match: A0A6J1CSA6 (protein RAE1-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014118 PE=4 SV=1)

HSP 1 Score: 687.6 bits (1773), Expect = 2.7e-194
Identity = 324/330 (98.18%), Postives = 326/330 (98.79%), Query Frame = 0


Query: 6   VAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTPKASISHDQPVLCSA 65
           VAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTPKASISHD PVLCSA
Sbjct: 15  VAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTPKASISHDHPVLCSA 74

Query: 66  WKDDGTTVFSGGCDKQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLVSGSWDKTLK 125
           WKDDGTTVFSGGCDKQVKMWPLLSGGQAMT+AMHEAPVKEVAWIPEMSLLVSGSWDKTLK
Sbjct: 75  WKDDGTTVFSGGCDKQVKMWPLLSGGQAMTIAMHEAPVKEVAWIPEMSLLVSGSWDKTLK 134

Query: 126 YWDTRQPNPVHTQQLPDRCYSMTVRYPLMVVGTADRNLIVFNLQNPQNEFKRIVSPLKYQ 185
           YWDTRQPNPVHTQQLPDRCYSMTVRYPLMVVGTADRNLIVFNLQ+PQNEFKRIVSPLKYQ
Sbjct: 135 YWDTRQPNPVHTQQLPDRCYSMTVRYPLMVVGTADRNLIVFNLQSPQNEFKRIVSPLKYQ 194

Query: 186 TRCVAAFPDQQGFLVGSIEGRVGVHHLDESLANKNFTFKCHRDGSEIYSVNSLNFHPVHH 245
           TRCVAAFPDQQGFLVGSIEGRVGVHHLDESLANKNFTFKCHRDGSEIYSVNSLNFHPVHH
Sbjct: 195 TRCVAAFPDQQGFLVGSIEGRVGVHHLDESLANKNFTFKCHRDGSEIYSVNSLNFHPVHH 254

Query: 246 TFATAGSDGAFNFWDKDSKQRLKAMLRCSQPISSSTFNQDGSIFAYSVCYDWSKGAENHN 305
           TFATAGSDGAFNFWDKDSKQRLKAMLRCSQPIS STFNQDGSIFAYSVCYDWSKGAENHN
Sbjct: 255 TFATAGSDGAFNFWDKDSKQRLKAMLRCSQPISCSTFNQDGSIFAYSVCYDWSKGAENHN 314

Query: 306 PATAKTCIYLHLPQESEVKGKPRVGGSGRK 336
           PATAKT IYLHLPQESEVKGKPRVGG GRK
Sbjct: 315 PATAKTYIYLHLPQESEVKGKPRVGGGGRK 344

[Close]

BLAST of CmoCh14G014160 vs. ExPASy TrEMBL
Match: A0A0A0KXV7 (WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G649250 PE=4 SV=1)

HSP 1 Score: 676.0 bits (1743), Expect = 8.0e-191
Identity = 317/330 (96.06%), Postives = 324/330 (98.18%), Query Frame = 0


Query: 6   VAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTPKASISHDQPVLCSA 65
           VAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGN+ASTPKASISHDQPVLCSA
Sbjct: 15  VAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNLASTPKASISHDQPVLCSA 74

Query: 66  WKDDGTTVFSGGCDKQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLVSGSWDKTLK 125
           WKDDGTTVFSGGCDKQVKMWPLLSGGQAMTVAMH+APVKEVAWIPE++LLVSGSWDKTLK
Sbjct: 75  WKDDGTTVFSGGCDKQVKMWPLLSGGQAMTVAMHDAPVKEVAWIPELNLLVSGSWDKTLK 134

Query: 126 YWDTRQPNPVHTQQLPDRCYSMTVRYPLMVVGTADRNLIVFNLQNPQNEFKRIVSPLKYQ 185
           YWDTRQPNPVHTQQLPDRCYSM VR+PLMVVGTADRNLIVFNLQNPQ+EFKRIVSPLKYQ
Sbjct: 135 YWDTRQPNPVHTQQLPDRCYSMAVRHPLMVVGTADRNLIVFNLQNPQSEFKRIVSPLKYQ 194

Query: 186 TRCVAAFPDQQGFLVGSIEGRVGVHHLDESLANKNFTFKCHRDGSEIYSVNSLNFHPVHH 245
           TRCVAAFPDQQGFLVGSIEGRVGVHHLDES+ANKNFTFKCHRDGSEIYSVNSLNFHPVHH
Sbjct: 195 TRCVAAFPDQQGFLVGSIEGRVGVHHLDESMANKNFTFKCHRDGSEIYSVNSLNFHPVHH 254

Query: 246 TFATAGSDGAFNFWDKDSKQRLKAMLRCSQPISSSTFNQDGSIFAYSVCYDWSKGAENHN 305
           TFATAGSDGAFNFWDKDSKQRLKAM RCSQPIS STFNQDGSIFAYSVCYDWSKGAENHN
Sbjct: 255 TFATAGSDGAFNFWDKDSKQRLKAMSRCSQPISCSTFNQDGSIFAYSVCYDWSKGAENHN 314

Query: 306 PATAKTCIYLHLPQESEVKGKPRVGGSGRK 336
           PATAKT IYLHLPQE EVKGKPRVGG GRK
Sbjct: 315 PATAKTYIYLHLPQEVEVKGKPRVGGGGRK 344

[Close]

BLAST of CmoCh14G014160 vs. ExPASy TrEMBL
Match: A0A1S3CAI4 (protein RAE1 OS=Cucumis melo OX=3656 GN=LOC103498666 PE=4 SV=1)

HSP 1 Score: 673.7 bits (1737), Expect = 4.0e-190
Identity = 316/330 (95.76%), Postives = 323/330 (97.88%), Query Frame = 0


Query: 6   VAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTPKASISHDQPVLCSA 65
           VAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGN+ASTPKASISHDQPVLCSA
Sbjct: 15  VAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNLASTPKASISHDQPVLCSA 74

Query: 66  WKDDGTTVFSGGCDKQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLVSGSWDKTLK 125
           WKDDGTTVFSGGCDKQVKMWPLLSGGQAMTVAMH+APVKEVAWIPE++LLVSGSWDKTLK
Sbjct: 75  WKDDGTTVFSGGCDKQVKMWPLLSGGQAMTVAMHDAPVKEVAWIPELNLLVSGSWDKTLK 134

Query: 126 YWDTRQPNPVHTQQLPDRCYSMTVRYPLMVVGTADRNLIVFNLQNPQNEFKRIVSPLKYQ 185
           YWDTRQPNPVHTQQLPDRCYSM VR+PLMVVGTADRNLIVFNLQ PQ+EFKRIVSPLKYQ
Sbjct: 135 YWDTRQPNPVHTQQLPDRCYSMAVRHPLMVVGTADRNLIVFNLQTPQSEFKRIVSPLKYQ 194

Query: 186 TRCVAAFPDQQGFLVGSIEGRVGVHHLDESLANKNFTFKCHRDGSEIYSVNSLNFHPVHH 245
           TRCVAAFPDQQGFLVGSIEGRVGVHHLDES+ANKNFTFKCHRDGSEIYSVNSLNFHPVHH
Sbjct: 195 TRCVAAFPDQQGFLVGSIEGRVGVHHLDESMANKNFTFKCHRDGSEIYSVNSLNFHPVHH 254

Query: 246 TFATAGSDGAFNFWDKDSKQRLKAMLRCSQPISSSTFNQDGSIFAYSVCYDWSKGAENHN 305
           TFATAGSDGAFNFWDKDSKQRLKAM RCSQPIS STFNQDGSIFAYSVCYDWSKGAENHN
Sbjct: 255 TFATAGSDGAFNFWDKDSKQRLKAMSRCSQPISCSTFNQDGSIFAYSVCYDWSKGAENHN 314

Query: 306 PATAKTCIYLHLPQESEVKGKPRVGGSGRK 336
           PATAKT IYLHLPQE EVKGKPRVGG GRK
Sbjct: 315 PATAKTYIYLHLPQEVEVKGKPRVGGGGRK 344

[Close]

BLAST of CmoCh14G014160 vs. NCBI nr
Match: XP_022955507.1 (protein RAE1-like [Cucurbita moschata] >XP_022955508.1 protein RAE1-like [Cucurbita moschata] >KAG7018381.1 Protein RAE1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 699.5 bits (1804), Expect = 1.4e-197
Identity = 330/330 (100.00%), Postives = 330/330 (100.00%), Query Frame = 0


Query: 6   VAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTPKASISHDQPVLCSA 65
           VAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTPKASISHDQPVLCSA
Sbjct: 15  VAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTPKASISHDQPVLCSA 74

Query: 66  WKDDGTTVFSGGCDKQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLVSGSWDKTLK 125
           WKDDGTTVFSGGCDKQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLVSGSWDKTLK
Sbjct: 75  WKDDGTTVFSGGCDKQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLVSGSWDKTLK 134

Query: 126 YWDTRQPNPVHTQQLPDRCYSMTVRYPLMVVGTADRNLIVFNLQNPQNEFKRIVSPLKYQ 185
           YWDTRQPNPVHTQQLPDRCYSMTVRYPLMVVGTADRNLIVFNLQNPQNEFKRIVSPLKYQ
Sbjct: 135 YWDTRQPNPVHTQQLPDRCYSMTVRYPLMVVGTADRNLIVFNLQNPQNEFKRIVSPLKYQ 194

Query: 186 TRCVAAFPDQQGFLVGSIEGRVGVHHLDESLANKNFTFKCHRDGSEIYSVNSLNFHPVHH 245
           TRCVAAFPDQQGFLVGSIEGRVGVHHLDESLANKNFTFKCHRDGSEIYSVNSLNFHPVHH
Sbjct: 195 TRCVAAFPDQQGFLVGSIEGRVGVHHLDESLANKNFTFKCHRDGSEIYSVNSLNFHPVHH 254

Query: 246 TFATAGSDGAFNFWDKDSKQRLKAMLRCSQPISSSTFNQDGSIFAYSVCYDWSKGAENHN 305
           TFATAGSDGAFNFWDKDSKQRLKAMLRCSQPISSSTFNQDGSIFAYSVCYDWSKGAENHN
Sbjct: 255 TFATAGSDGAFNFWDKDSKQRLKAMLRCSQPISSSTFNQDGSIFAYSVCYDWSKGAENHN 314

Query: 306 PATAKTCIYLHLPQESEVKGKPRVGGSGRK 336
           PATAKTCIYLHLPQESEVKGKPRVGGSGRK
Sbjct: 315 PATAKTCIYLHLPQESEVKGKPRVGGSGRK 344

[Close]

BLAST of CmoCh14G014160 vs. NCBI nr
Match: XP_022980460.1 (protein RAE1-like [Cucurbita maxima] >XP_022980461.1 protein RAE1-like [Cucurbita maxima])

HSP 1 Score: 699.5 bits (1804), Expect = 1.4e-197
Identity = 330/330 (100.00%), Postives = 330/330 (100.00%), Query Frame = 0


Query: 6   VAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTPKASISHDQPVLCSA 65
           VAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTPKASISHDQPVLCSA
Sbjct: 15  VAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTPKASISHDQPVLCSA 74

Query: 66  WKDDGTTVFSGGCDKQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLVSGSWDKTLK 125
           WKDDGTTVFSGGCDKQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLVSGSWDKTLK
Sbjct: 75  WKDDGTTVFSGGCDKQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLVSGSWDKTLK 134

Query: 126 YWDTRQPNPVHTQQLPDRCYSMTVRYPLMVVGTADRNLIVFNLQNPQNEFKRIVSPLKYQ 185
           YWDTRQPNPVHTQQLPDRCYSMTVRYPLMVVGTADRNLIVFNLQNPQNEFKRIVSPLKYQ
Sbjct: 135 YWDTRQPNPVHTQQLPDRCYSMTVRYPLMVVGTADRNLIVFNLQNPQNEFKRIVSPLKYQ 194

Query: 186 TRCVAAFPDQQGFLVGSIEGRVGVHHLDESLANKNFTFKCHRDGSEIYSVNSLNFHPVHH 245
           TRCVAAFPDQQGFLVGSIEGRVGVHHLDESLANKNFTFKCHRDGSEIYSVNSLNFHPVHH
Sbjct: 195 TRCVAAFPDQQGFLVGSIEGRVGVHHLDESLANKNFTFKCHRDGSEIYSVNSLNFHPVHH 254

Query: 246 TFATAGSDGAFNFWDKDSKQRLKAMLRCSQPISSSTFNQDGSIFAYSVCYDWSKGAENHN 305
           TFATAGSDGAFNFWDKDSKQRLKAMLRCSQPISSSTFNQDGSIFAYSVCYDWSKGAENHN
Sbjct: 255 TFATAGSDGAFNFWDKDSKQRLKAMLRCSQPISSSTFNQDGSIFAYSVCYDWSKGAENHN 314

Query: 306 PATAKTCIYLHLPQESEVKGKPRVGGSGRK 336
           PATAKTCIYLHLPQESEVKGKPRVGGSGRK
Sbjct: 315 PATAKTCIYLHLPQESEVKGKPRVGGSGRK 344

[Close]

BLAST of CmoCh14G014160 vs. NCBI nr
Match: XP_023528848.1 (protein RAE1-like [Cucurbita pepo subsp. pepo] >XP_023528849.1 protein RAE1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 697.2 bits (1798), Expect = 6.9e-197
Identity = 329/330 (99.70%), Postives = 329/330 (99.70%), Query Frame = 0


Query: 6   VAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTPKASISHDQPVLCSA 65
           VAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNA NVASTPKASISHDQPVLCSA
Sbjct: 15  VAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNASNVASTPKASISHDQPVLCSA 74

Query: 66  WKDDGTTVFSGGCDKQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLVSGSWDKTLK 125
           WKDDGTTVFSGGCDKQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLVSGSWDKTLK
Sbjct: 75  WKDDGTTVFSGGCDKQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLVSGSWDKTLK 134

Query: 126 YWDTRQPNPVHTQQLPDRCYSMTVRYPLMVVGTADRNLIVFNLQNPQNEFKRIVSPLKYQ 185
           YWDTRQPNPVHTQQLPDRCYSMTVRYPLMVVGTADRNLIVFNLQNPQNEFKRIVSPLKYQ
Sbjct: 135 YWDTRQPNPVHTQQLPDRCYSMTVRYPLMVVGTADRNLIVFNLQNPQNEFKRIVSPLKYQ 194

Query: 186 TRCVAAFPDQQGFLVGSIEGRVGVHHLDESLANKNFTFKCHRDGSEIYSVNSLNFHPVHH 245
           TRCVAAFPDQQGFLVGSIEGRVGVHHLDESLANKNFTFKCHRDGSEIYSVNSLNFHPVHH
Sbjct: 195 TRCVAAFPDQQGFLVGSIEGRVGVHHLDESLANKNFTFKCHRDGSEIYSVNSLNFHPVHH 254

Query: 246 TFATAGSDGAFNFWDKDSKQRLKAMLRCSQPISSSTFNQDGSIFAYSVCYDWSKGAENHN 305
           TFATAGSDGAFNFWDKDSKQRLKAMLRCSQPISSSTFNQDGSIFAYSVCYDWSKGAENHN
Sbjct: 255 TFATAGSDGAFNFWDKDSKQRLKAMLRCSQPISSSTFNQDGSIFAYSVCYDWSKGAENHN 314

Query: 306 PATAKTCIYLHLPQESEVKGKPRVGGSGRK 336
           PATAKTCIYLHLPQESEVKGKPRVGGSGRK
Sbjct: 315 PATAKTCIYLHLPQESEVKGKPRVGGSGRK 344

[Close]

BLAST of CmoCh14G014160 vs. NCBI nr
Match: XP_022144434.1 (protein RAE1-like isoform X1 [Momordica charantia] >XP_022144435.1 protein RAE1-like isoform X1 [Momordica charantia])

HSP 1 Score: 687.6 bits (1773), Expect = 5.5e-194
Identity = 324/330 (98.18%), Postives = 326/330 (98.79%), Query Frame = 0


Query: 6   VAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTPKASISHDQPVLCSA 65
           VAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTPKASISHD PVLCSA
Sbjct: 15  VAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTPKASISHDHPVLCSA 74

Query: 66  WKDDGTTVFSGGCDKQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLVSGSWDKTLK 125
           WKDDGTTVFSGGCDKQVKMWPLLSGGQAMT+AMHEAPVKEVAWIPEMSLLVSGSWDKTLK
Sbjct: 75  WKDDGTTVFSGGCDKQVKMWPLLSGGQAMTIAMHEAPVKEVAWIPEMSLLVSGSWDKTLK 134

Query: 126 YWDTRQPNPVHTQQLPDRCYSMTVRYPLMVVGTADRNLIVFNLQNPQNEFKRIVSPLKYQ 185
           YWDTRQPNPVHTQQLPDRCYSMTVRYPLMVVGTADRNLIVFNLQ+PQNEFKRIVSPLKYQ
Sbjct: 135 YWDTRQPNPVHTQQLPDRCYSMTVRYPLMVVGTADRNLIVFNLQSPQNEFKRIVSPLKYQ 194

Query: 186 TRCVAAFPDQQGFLVGSIEGRVGVHHLDESLANKNFTFKCHRDGSEIYSVNSLNFHPVHH 245
           TRCVAAFPDQQGFLVGSIEGRVGVHHLDESLANKNFTFKCHRDGSEIYSVNSLNFHPVHH
Sbjct: 195 TRCVAAFPDQQGFLVGSIEGRVGVHHLDESLANKNFTFKCHRDGSEIYSVNSLNFHPVHH 254

Query: 246 TFATAGSDGAFNFWDKDSKQRLKAMLRCSQPISSSTFNQDGSIFAYSVCYDWSKGAENHN 305
           TFATAGSDGAFNFWDKDSKQRLKAMLRCSQPIS STFNQDGSIFAYSVCYDWSKGAENHN
Sbjct: 255 TFATAGSDGAFNFWDKDSKQRLKAMLRCSQPISCSTFNQDGSIFAYSVCYDWSKGAENHN 314

Query: 306 PATAKTCIYLHLPQESEVKGKPRVGGSGRK 336
           PATAKT IYLHLPQESEVKGKPRVGG GRK
Sbjct: 315 PATAKTYIYLHLPQESEVKGKPRVGGGGRK 344

[Close]

BLAST of CmoCh14G014160 vs. NCBI nr
Match: XP_038890307.1 (protein RAE1 [Benincasa hispida])

HSP 1 Score: 676.4 bits (1744), Expect = 1.3e-190
Identity = 318/330 (96.36%), Postives = 324/330 (98.18%), Query Frame = 0


Query: 6   VAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTPKASISHDQPVLCSA 65
           VAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTPKASISHDQPVLCSA
Sbjct: 15  VAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTPKASISHDQPVLCSA 74

Query: 66  WKDDGTTVFSGGCDKQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLVSGSWDKTLK 125
           WKDDGTTVFSGGCDKQVKMWPLL+GGQAMTVAMHEAPVKEVAWIPEMSLLVSGSWDKTLK
Sbjct: 75  WKDDGTTVFSGGCDKQVKMWPLLAGGQAMTVAMHEAPVKEVAWIPEMSLLVSGSWDKTLK 134

Query: 126 YWDTRQPNPVHTQQLPDRCYSMTVRYPLMVVGTADRNLIVFNLQNPQNEFKRIVSPLKYQ 185
           YWDTRQPNPVHTQQLPDRCYSM+VR+PLMVVGTADRNLIVFNLQ PQ+E+KRIVSPLKYQ
Sbjct: 135 YWDTRQPNPVHTQQLPDRCYSMSVRHPLMVVGTADRNLIVFNLQTPQSEYKRIVSPLKYQ 194

Query: 186 TRCVAAFPDQQGFLVGSIEGRVGVHHLDESLANKNFTFKCHRDGSEIYSVNSLNFHPVHH 245
           TRCVAAFPDQQGFLVGSIEGRVGVHHLDES+ANKNFTFKCHRDGSEIYSVNSLNFHPVHH
Sbjct: 195 TRCVAAFPDQQGFLVGSIEGRVGVHHLDESMANKNFTFKCHRDGSEIYSVNSLNFHPVHH 254

Query: 246 TFATAGSDGAFNFWDKDSKQRLKAMLRCSQPISSSTFNQDGSIFAYSVCYDWSKGAENHN 305
           TFATAGSDGAFNFWDKDSKQRLKAM RCSQPIS STFNQDGSIFAYSVCYDWSKGAENHN
Sbjct: 255 TFATAGSDGAFNFWDKDSKQRLKAMSRCSQPISCSTFNQDGSIFAYSVCYDWSKGAENHN 314

Query: 306 PATAKTCIYLHLPQESEVKGKPRVGGSGRK 336
           PATAKT IYLHLPQE EVKGKPRVGG GRK
Sbjct: 315 PATAKTYIYLHLPQEVEVKGKPRVGGGGRK 344

[Close]

BLAST of CmoCh14G014160 vs. TAIR 10
Match: AT1G80670.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 591.7 bits (1524), Expect = 3.8e-169
Identity = 270/330 (81.82%), Postives = 300/330 (90.91%), Query Frame = 0


Query: 6   VAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTPKASISHDQPVLCSA 65
           V   P+DS+SSLSFSP+A+ LVATSWDNQVRCWEI ++  ++AS PKASISHDQPVLCSA
Sbjct: 20  VTPSPADSISSLSFSPRADILVATSWDNQVRCWEISRSGASLASAPKASISHDQPVLCSA 79

Query: 66  WKDDGTTVFSGGCDKQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLVSGSWDKTLK 125
           WKDDGTTVFSGGCDKQ KMWPLLSGGQ +TVAMHE P+  +AWIP M+LL +GSWDKTLK
Sbjct: 80  WKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIPGMNLLATGSWDKTLK 139

Query: 126 YWDTRQPNPVHTQQLPDRCYSMTVRYPLMVVGTADRNLIVFNLQNPQNEFKRIVSPLKYQ 185
           YWDTRQ NPVHTQQLPD+CY+++V++PLMVVGTADRNLIVFNLQNPQ EFKRI SPLKYQ
Sbjct: 140 YWDTRQQNPVHTQQLPDKCYTLSVKHPLMVVGTADRNLIVFNLQNPQTEFKRIQSPLKYQ 199

Query: 186 TRCVAAFPDQQGFLVGSIEGRVGVHHLDESLANKNFTFKCHRDGSEIYSVNSLNFHPVHH 245
           TRCV AFPDQQGFLVGSIEGRVGVHHLD+S  +KNFTFKCHRDG++IYSVNSLNFHPVH 
Sbjct: 200 TRCVTAFPDQQGFLVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGNDIYSVNSLNFHPVHG 259

Query: 246 TFATAGSDGAFNFWDKDSKQRLKAMLRCSQPISSSTFNQDGSIFAYSVCYDWSKGAENHN 305
           TFATAGSDGAFNFWDKDSKQRLKAM RC+QPI  S+FN DGSI+AY+ CYDWSKGAENHN
Sbjct: 260 TFATAGSDGAFNFWDKDSKQRLKAMSRCNQPIPCSSFNHDGSIYAYAACYDWSKGAENHN 319

Query: 306 PATAKTCIYLHLPQESEVKGKPRVGGSGRK 336
           PATAK+ I+LHLPQESEVK KPRVG +GRK
Sbjct: 320 PATAKSSIFLHLPQESEVKAKPRVGATGRK 349

[Close]

BLAST of CmoCh14G014160 vs. TAIR 10
Match: AT3G19590.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 206.5 bits (524), Expect = 3.4e-53
Identity = 117/335 (34.93%), Postives = 186/335 (55.52%), Query Frame = 0


Query: 6   VAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTPKASISHDQPVLCSA 65
           ++ PPSD +S+L FS  ++HL+ +SWD +VR +++  N      + K    H   VL   
Sbjct: 12  LSNPPSDGISNLRFSNNSDHLLVSSWDKRVRLYDVSTN------SLKGEFLHGGAVLDCC 71

Query: 66  WKDDGTTVFSGGCDKQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLVSGSWDKTLK 125
           + DD  + FS G D +V+   + + G+   +  H+  V+ V +      +++GSWDKT+K
Sbjct: 72  FHDD-FSGFSVGADYKVRR-IVFNVGKEDILGTHDKAVRCVEYSYAAGQVITGSWDKTVK 131

Query: 126 YWDTR-----QPNPVHTQQLPDRCYSMTVRYPLMVVGTADRNLIVFNLQNPQNEFKRIVS 185
            WD R     +   V T   P+R YSM++    +VV TA R++ +++L+N     +R  S
Sbjct: 132 CWDPRGASGPERTQVGTYLQPERVYSMSLVGHRLVVATAGRHVNIYDLRNMSQPEQRRES 191

Query: 186 PLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLD--ESLANKNFTFKCHRDGSE----IYS 245
            LKYQTRCV  +P+  G+ + S+EGRV +   D  E+   K + FKCHR        +Y 
Sbjct: 192 SLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEAAQAKKYAFKCHRKSEAGRDIVYP 251

Query: 246 VNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMLRCSQPISSSTFNQDGSIFAYSVC 305
           VNS+ FHP++ TFAT G DG  N WD ++K+RL    +    IS+ +F++DG + A +  
Sbjct: 252 VNSIAFHPIYGTFATGGCDGFVNIWDGNNKKRLYQYSKYPTSISALSFSRDGQLLAVASS 311

Query: 306 YDWSKGAENHNPATAKTCIYLHLPQESEVKGKPRV 330
           Y + +G ++  P      I++    E EVK KP+V
Sbjct: 312 YTFEEGEKSQEP----EAIFVRSVNEIEVKPKPKV 334

[Close]

BLAST of CmoCh14G014160 vs. TAIR 10
Match: AT1G49910.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 199.9 bits (507), Expect = 3.2e-51
Identity = 114/335 (34.03%), Postives = 184/335 (54.93%), Query Frame = 0


Query: 6   VAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTPKASISHDQPVLCSA 65
           ++ PPSD +S+L FS  ++HL+ +SWD  VR ++            +    H   VL   
Sbjct: 11  LSNPPSDGISNLRFSNNSDHLLVSSWDKSVRLYDAN------GDLMRGEFKHGGAVLDCC 70

Query: 66  WKDDGTTVFSGGCDKQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLVSGSWDKTLK 125
           + DD ++ FS   D +V+     + G+   +  HE PV+ V +      +++GSWDKT+K
Sbjct: 71  FHDD-SSGFSVCADTKVRRID-FNAGKEDVLGTHEKPVRCVEYSYAAGQVITGSWDKTIK 130

Query: 126 YWDTR-----QPNPVHTQQLPDRCYSMTVRYPLMVVGTADRNLIVFNLQNPQNEFKRIVS 185
            WD R     +   + T   P+R  S+++    +VV TA R++ +++L+N     +R  S
Sbjct: 131 CWDPRGASGTERTQIGTYMQPERVNSLSLVGNRLVVATAGRHVNIYDLRNMSQPEQRRES 190

Query: 186 PLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLD--ESLANKNFTFKCHR---DGSEI-YS 245
            LKYQTRCV  +P+  G+ + S+EGRV +   D  E+   K + FKCHR   DG +I Y 
Sbjct: 191 SLKYQTRCVRCYPNGTGYALSSVEGRVSMEFFDLSEAAQAKKYAFKCHRKSEDGRDIVYP 250

Query: 246 VNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMLRCSQPISSSTFNQDGSIFAYSVC 305
           VN++ FHP++ TFA+ G DG  N WD ++K+RL    +    I++ +F++DG + A +  
Sbjct: 251 VNAIAFHPIYGTFASGGCDGFVNIWDGNNKKRLYQYSKYPTSIAALSFSRDGGLLAVASS 310

Query: 306 YDWSKGAENHNPATAKTCIYLHLPQESEVKGKPRV 330
           Y + +G + H P      I++    E EVK KP+V
Sbjct: 311 YTFEEGDKPHEP----DAIFVRSVNEIEVKPKPKV 333

[Close]

BLAST of CmoCh14G014160 vs. TAIR 10
Match: AT1G15850.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 199.9 bits (507), Expect = 3.2e-51
Identity = 89/120 (74.17%), Postives = 104/120 (86.67%), Query Frame = 0


Query: 6   VAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTPKASISHDQPVLCSA 65
           +  P +DS+SSLSFSPKA+ LVATSWD QVRCWEI ++ G++AS PK S+SHDQPVLCSA
Sbjct: 21  ITPPATDSISSLSFSPKADILVATSWDCQVRCWEITRSDGSIASEPKVSMSHDQPVLCSA 80

Query: 66  WKDDGTTVFSGGCDKQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLVSGSWDKTLK 125
           WKDDGTTVF+GGCDKQ KMWPLLSG Q  TVAMH+AP  ++AWIP M+LLV+GSWDKTLK
Sbjct: 81  WKDDGTTVFTGGCDKQAKMWPLLSGAQPSTVAMHDAPFNQIAWIPGMNLLVTGSWDKTLK 140

[Close]

BLAST of CmoCh14G014160 vs. TAIR 10
Match: AT1G69400.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 125.2 bits (313), Expect = 1.0e-28
Identity = 81/301 (26.91%), Postives = 154/301 (51.16%), Query Frame = 0


Query: 9   PPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTPKASISHDQPVLCSAWKD 68
           P  D+VS L FSP++N+L+  SWD+ +R ++       V S+  +   + Q  L     +
Sbjct: 11  PIEDAVSRLRFSPQSNNLLVASWDSYLRLYD-------VESSSLSLELNSQAALLDCCFE 70

Query: 69  DGTTVFSGGCDKQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPEMSLLVSGSWDKTLKYWD 128
           + +T F+ G D  ++ +  L+ G   T+  H+     + +  E   ++S  +D+ +K+WD
Sbjct: 71  NESTSFTSGSDGFIRRYD-LNAGTVDTIGRHDDISTSIVYSYEKGEVISTGFDEKIKFWD 130

Query: 129 TRQ-PNPVHTQQLPDRCYSMTVRYPLMVVGTADRNLIVFNLQNPQNEFKRIVSPLKYQTR 188
           TRQ  + V +         +TV    +VV   D ++ +++L+N    F+   S ++   R
Sbjct: 131 TRQRESLVFSTDAGGAVGCVTVSGNNLVV-CVDASMHIYDLRNLDEAFQSYASQVEVPIR 190

Query: 189 CVAAFPDQQGFLVGSIEGRVGVHHLDESLANK-NFTFKCH---RDGS-EIYSVNSLNFHP 248
           C+ + P  +G+ VGS++GRV V   + S +++  ++F+CH   R+G  +   +N++ F P
Sbjct: 191 CITSVPYSRGYAVGSVDGRVAVDFPNTSCSSEIKYSFRCHPKSRNGRLDGVCINAIEFSP 250

Query: 249 V-HHTFATAGSDGAFNFWDKDSKQRLKAMLRCSQPISSSTFNQDGSIFAYSVCYDWSKGA 303
               TF T  ++G    W+  S++RL  + R S  I+S  F+  G + A +  + +    
Sbjct: 251 CGSGTFVTGDNEGYVISWNAKSRRRLNELPRYSNSIASLAFDHTGELLAIASSHTYQDAK 302

The following BLAST results are available for this feature:

BLAST of CmoCh14G014160 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q38942	5.4e-168	81.82	Protein RAE1 OS=Arabidopsis thaliana OX=3702 GN=RAE1 PE=1 SV=2	[more]
Q5FVA9	1.1e-93	50.00	mRNA export factor OS=Xenopus tropicalis OX=8364 GN=rae1 PE=2 SV=1	[more]
Q7ZWF0	1.6e-92	48.82	mRNA export factor OS=Danio rerio OX=7955 GN=rae1 PE=2 SV=2	[more]
P78406	6.9e-91	50.00	mRNA export factor OS=Homo sapiens OX=9606 GN=RAE1 PE=1 SV=1	[more]
Q5RF99	6.9e-91	50.00	mRNA export factor OS=Pongo abelii OX=9601 GN=RAE1 PE=2 SV=1	[more]

BLAST of CmoCh14G014160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ITM9	6.7e-198	100.00	protein RAE1-like OS=Cucurbita maxima OX=3661 GN=LOC111479843 PE=4 SV=1	[more]
A0A6J1GU54	6.7e-198	100.00	protein RAE1-like OS=Cucurbita moschata OX=3662 GN=LOC111457513 PE=4 SV=1	[more]
A0A6J1CSA6	2.7e-194	98.18	protein RAE1-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014118 PE=4...	[more]
A0A0A0KXV7	8.0e-191	96.06	WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G...	[more]
A0A1S3CAI4	4.0e-190	95.76	protein RAE1 OS=Cucumis melo OX=3656 GN=LOC103498666 PE=4 SV=1	[more]

BLAST of CmoCh14G014160 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022955507.1	1.4e-197	100.00	protein RAE1-like [Cucurbita moschata] >XP_022955508.1 protein RAE1-like [Cucurb...	[more]
XP_022980460.1	1.4e-197	100.00	protein RAE1-like [Cucurbita maxima] >XP_022980461.1 protein RAE1-like [Cucurbit...	[more]
XP_023528848.1	6.9e-197	99.70	protein RAE1-like [Cucurbita pepo subsp. pepo] >XP_023528849.1 protein RAE1-like...	[more]
XP_022144434.1	5.5e-194	98.18	protein RAE1-like isoform X1 [Momordica charantia] >XP_022144435.1 protein RAE1-...	[more]
XP_038890307.1	1.3e-190	96.36	protein RAE1 [Benincasa hispida]	[more]

BLAST of CmoCh14G014160 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80670.1	3.8e-169	81.82	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G19590.1	3.4e-53	34.93	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G49910.1	3.2e-51	34.03	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G15850.1	3.2e-51	74.17	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G69400.1	1.0e-28	26.91	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 247..261 score: 29.22 coord: 26..40 score: 29.43 coord: 115..129 score: 42.89
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 172..211 e-value: 320.0 score: 1.2 coord: 89..128 e-value: 1.1E-5 score: 34.9 coord: 216..260 e-value: 0.0021 score: 27.3 coord: 48..86 e-value: 1.4E-4 score: 31.2 coord: 2..39 e-value: 0.014 score: 24.5 coord: 131..167 e-value: 230.0 score: 2.0
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 221..260 e-value: 0.018 score: 15.9 coord: 99..128 e-value: 0.0024 score: 18.7 coord: 13..38 e-value: 0.0028 score: 18.5 coord: 56..85 e-value: 0.013 score: 16.3
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 54..95 score: 11.009724
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 235..269 score: 9.806668
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 7..40 score: 10.307941
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 96..137 score: 14.41838
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 2..329 e-value: 2.1E-105 score: 355.1
None	No IPR available	PANTHER	PTHR10971	MRNA EXPORT FACTOR AND BUB3	coord: 6..331
None	No IPR available	PANTHER	PTHR10971:SF27	PLANT POLY(A)+ RNA EXPORT PROTEIN	coord: 6..331
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 96..130 score: 11.049229
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 7..40 score: 8.676514
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 54..85 score: 8.676514
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 9..292

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh14G014160.1	CmoCh14G014160.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006405	RNA export from nucleus
biological_process	GO:0000972	transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery
cellular_component	GO:0005643	nuclear pore
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0043130	ubiquitin binding
molecular_function	GO:0005515	protein binding