CmoCh14G012840 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh14G012840
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionEpidermal patterning factor-like protein
LocationCmo_Chr14: 10762651 .. 10763731 (+)
RNA-Seq ExpressionCmoCh14G012840
SyntenyCmoCh14G012840
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTAAAATTTTTAAAACACGTATGTCAGAAAGGGATTTCTAAACCTTTATAAAAAATGATTCATTTCCCTCTCTAATTGATACGTGATCTCATGGAGAGGCCTAGCATGACTTTGCTTCCTTCCTAACTCTTTGATAAGGATACATTACTTGTTTATAACGCCAAATCTCTCTGCCAGTCCTAAGATAGACGCCAAGAGGGGGAGAGAGAGAGAGGATCTGAGTTTGGGTATGGGGAAATGTGAAGCCGCTTGAGAGGCCTAATTCTTTCTACCTTCTTCTTATAACCCAAATCATTTCCCGTTTTTACCCATTTATCATCTCTCAATCCCACCATAATCATCATTATTATCATTTAAGCTTTAGAAGGAGAAGACATGAAAGGAACATACCGTTGTTGTTGTTGTTTTATATTGACTCTGCAATTAGCTTGTTGGGTTTCTGCAGCAACCACAACTTTTGCTCTCCTTCCTCATAAACAACAAGGTTCTTACAACTTCCTTTCCTCTTTTTGGTCTCACATTTAAGAGAAAGTCCAATATCGGTTAGCGGTGGGCGTGTATCGTTACATCTTCTTCTAACTCAAATTGCTTGCTTGCTTGTTGCTGCTTCCAGGTTTCAATTTTGATTCTGTGAAGGCTGTTGAAGAAGGTGTAGTAAAAGGGGGAGAAGTTTATAGAGGGATGAGGAAAATAGGGTCGAGTCCGCCGAGCTGTGAGCACAAATGCTATGGGTGCACACCATGTGAAGCCATTCAAGTGCCTACCAACAACAGGCGCAGCCATGTGGGGATCCAATACACTAACTATGAGCCTGAGGGATGGAAATGCAAGTGTGGCCCTTCCTTTTACAGCCCTTGATTTGATTCTAAACCTGAGAGAGAAAATTAACAAGTATTAGAATAAACTCCCTTTTCCTTCATTTTTCTTTTTAATTTACTTCCTGTATAAACAAACTTCTTCATTCAACTATCTCTCCCAAGTCATACGTACTCCTTAAAGAGCCTCTCTTTAATCGAGGTTCGATTCCTTTTTAGAGTCTTCGTACAAACTACATACTTTGTTCGACATTTGAAGATTTAGG

mRNA sequence

CTAAAATTTTTAAAACACGTATGTCAGAAAGGGATTTCTAAACCTTTATAAAAAATGATTCATTTCCCTCTCTAATTGATACGTGATCTCATGGAGAGGCCTAGCATGACTTTGCTTCCTTCCTAACTCTTTGATAAGGATACATTACTTGTTTATAACGCCAAATCTCTCTGCCAGTCCTAAGATAGACGCCAAGAGGGGGAGAGAGAGAGAGGATCTGAGTTTGGGTATGGGGAAATGTGAAGCCGCTTGAGAGGCCTAATTCTTTCTACCTTCTTCTTATAACCCAAATCATTTCCCGTTTTTACCCATTTATCATCTCTCAATCCCACCATAATCATCATTATTATCATTTAAGCTTTAGAAGGAGAAGACATGAAAGGAACATACCGTTGTTGTTGTTGTTTTATATTGACTCTGCAATTAGCTTGTTGGGTTTCTGCAGCAACCACAACTTTTGCTCTCCTTCCTCATAAACAACAAGGTTTCAATTTTGATTCTGTGAAGGCTGTTGAAGAAGGTGTAGTAAAAGGGGGAGAAGTTTATAGAGGGATGAGGAAAATAGGGTCGAGTCCGCCGAGCTGTGAGCACAAATGCTATGGGTGCACACCATGTGAAGCCATTCAAGTGCCTACCAACAACAGGCGCAGCCATGTGGGGATCCAATACACTAACTATGAGCCTGAGGGATGGAAATGCAAGTGTGGCCCTTCCTTTTACAGCCCTTGATTTGATTCTAAACCTGAGAGAGAAAATTAACAAGTATTAGAATAAACTCCCTTTTCCTTCATTTTTCTTTTTAATTTACTTCCTGTATAAACAAACTTCTTCATTCAACTATCTCTCCCAAGTCATACGTACTCCTTAAAGAGCCTCTCTTTAATCGAGGTTCGATTCCTTTTTAGAGTCTTCGTACAAACTACATACTTTGTTCGACATTTGAAGATTTAGG

Coding sequence (CDS)

ATGAAAGGAACATACCGTTGTTGTTGTTGTTTTATATTGACTCTGCAATTAGCTTGTTGGGTTTCTGCAGCAACCACAACTTTTGCTCTCCTTCCTCATAAACAACAAGGTTTCAATTTTGATTCTGTGAAGGCTGTTGAAGAAGGTGTAGTAAAAGGGGGAGAAGTTTATAGAGGGATGAGGAAAATAGGGTCGAGTCCGCCGAGCTGTGAGCACAAATGCTATGGGTGCACACCATGTGAAGCCATTCAAGTGCCTACCAACAACAGGCGCAGCCATGTGGGGATCCAATACACTAACTATGAGCCTGAGGGATGGAAATGCAAGTGTGGCCCTTCCTTTTACAGCCCTTGA

Protein sequence

MKGTYRCCCCFILTLQLACWVSAATTTFALLPHKQQGFNFDSVKAVEEGVVKGGEVYRGMRKIGSSPPSCEHKCYGCTPCEAIQVPTNNRRSHVGIQYTNYEPEGWKCKCGPSFYSP
Homology
[Close]
BLAST of CmoCh14G012840 vs. ExPASy Swiss-Prot
Match: C4B8C4 (EPIDERMAL PATTERNING FACTOR-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=EPFL3 PE=1 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 8.8e-17
Identity = 34/58 (58.62%), Postives = 41/58 (70.69%), Query Frame = 0 

Query: 55  EVYRGMRKIGSSPPSCEHKCYGCTPCEAIQVPTNNRRSHVGIQYTNYEPEGWKCKCGP 113
           E+ +  R+IGS PPSCE KCYGC PCEAIQ PT +   H+   Y NY+PEGW+C C P
Sbjct: 49  EIVKRRRRIGSKPPSCEKKCYGCEPCEAIQFPTISSIPHLSPHYANYQPEGWRCHCPP 106

[Close]
BLAST of CmoCh14G012840 vs. ExPASy Swiss-Prot
Match: Q9LFT5 (EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=EPFL1 PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.2e-10
Identity = 32/76 (42.11%), Postives = 40/76 (52.63%), Query Frame = 0 

Query: 62  KIGSSPPSCEHKCYGCTPCEAIQVPTNNRRSH--------------------VGIQYTNY 118
           ++GS+PPSC ++C  C PC AIQVPT   RS                     V  QY+NY
Sbjct: 47  RLGSTPPSCHNRCNNCHPCMAIQVPTLPTRSRFTRVNPFSGGFVRPPSSLTTVLDQYSNY 106

[Close]
BLAST of CmoCh14G012840 vs. ExPASy Swiss-Prot
Match: Q1PEY6 (EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EPFL6 PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 3.0e-09
Identity = 30/67 (44.78%), Postives = 36/67 (53.73%), Query Frame = 0 

Query: 52  KGGEVYRGMRKIGSSPPSCEHKCYGCTPCEAIQVPTNNRRSHVGIQYT-NYEPEGWKCKC 111
           K  E+ R +R +GSSPP C  KC  CTPC+ + VP        G   T  Y PE W+CKC
Sbjct: 95  KEAELRRILRGLGSSPPRCSSKCGRCTPCKPVHVPV-----PPGTPVTAEYYPEAWRCKC 154

Query: 112 GPSFYSP 118
           G   Y P
Sbjct: 155 GNKLYMP 156

[Close]
BLAST of CmoCh14G012840 vs. ExPASy Swiss-Prot
Match: Q2V3I3 (EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=EPFL4 PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.1e-06
Identity = 23/54 (42.59%), Postives = 28/54 (51.85%), Query Frame = 0 

Query: 64  GSSPPSCEHKCYGCTPCEAIQVPTNNRRSHVGIQYTNYEPEGWKCKCGPSFYSP 118
           GSSPP+C  KC  C PC+ + VP     S        Y PE W+CKCG   + P
Sbjct: 60  GSSPPTCRSKCGKCQPCKPVHVPIQPGLS----MPLEYYPEAWRCKCGNKLFMP 109

[Close]
BLAST of CmoCh14G012840 vs. ExPASy Swiss-Prot
Match: Q9LUH9 (EPIDERMAL PATTERNING FACTOR-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=EPFL5 PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 3.1e-06
Identity = 23/54 (42.59%), Postives = 27/54 (50.00%), Query Frame = 0 

Query: 64  GSSPPSCEHKCYGCTPCEAIQVPTNNRRSHVGIQYTNYEPEGWKCKCGPSFYSP 118
           GS PP C  KC  C PC+A+ VP         I    Y PE W+CKCG   + P
Sbjct: 58  GSVPPMCRLKCGKCEPCKAVHVPIQPGL----IMPLEYYPEAWRCKCGNKLFMP 107

[Close]
BLAST of CmoCh14G012840 vs. ExPASy TrEMBL
Match: A0A6J1GTM4 (Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111457464 PE=3 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 2.8e-66
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0 

Query: 1   MKGTYRCCCCFILTLQLACWVSAATTTFALLPHKQQGFNFDSVKAVEEGVVKGGEVYRGM 60
           MKGTYRCCCCFILTLQLACWVSAATTTFALLPHKQQGFNFDSVKAVEEGVVKGGEVYRGM
Sbjct: 1   MKGTYRCCCCFILTLQLACWVSAATTTFALLPHKQQGFNFDSVKAVEEGVVKGGEVYRGM 60

Query: 61  RKIGSSPPSCEHKCYGCTPCEAIQVPTNNRRSHVGIQYTNYEPEGWKCKCGPSFYSP 118
           RKIGSSPPSCEHKCYGCTPCEAIQVPTNNRRSHVGIQYTNYEPEGWKCKCGPSFYSP
Sbjct: 61  RKIGSSPPSCEHKCYGCTPCEAIQVPTNNRRSHVGIQYTNYEPEGWKCKCGPSFYSP 117

[Close]
BLAST of CmoCh14G012840 vs. ExPASy TrEMBL
Match: A0A6J1IUG9 (Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC111480029 PE=3 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 5.8e-64
Identity = 114/117 (97.44%), Postives = 115/117 (98.29%), Query Frame = 0 

Query: 1   MKGTYRCCCCFILTLQLACWVSAATTTFALLPHKQQGFNFDSVKAVEEGVVKGGEVYRGM 60
           MKGTY CCCCFILTLQLACWVSAATTTFALLPHKQQGFNFDSVKAVEEGVVK GEVYRGM
Sbjct: 1   MKGTYCCCCCFILTLQLACWVSAATTTFALLPHKQQGFNFDSVKAVEEGVVKEGEVYRGM 60

Query: 61  RKIGSSPPSCEHKCYGCTPCEAIQVPTNNRRSHVGIQYTNYEPEGWKCKCGPSFYSP 118
           RKIGSSPPSCEHKCYGC+PCEAIQVPTNNRRSHVGIQYTNYEPEGWKCKCGPSFYSP
Sbjct: 61  RKIGSSPPSCEHKCYGCSPCEAIQVPTNNRRSHVGIQYTNYEPEGWKCKCGPSFYSP 117

[Close]
BLAST of CmoCh14G012840 vs. ExPASy TrEMBL
Match: A0A1S3BIS6 (Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103490030 PE=3 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 7.7e-40
Identity = 88/122 (72.13%), Postives = 94/122 (77.05%), Query Frame = 0 

Query: 1   MKGTYRCCCCFILTLQLACWVSAATTTF----ALLPHKQQGFNFDSVKAVEEGVVKGGEV 60
           MKGTY    CFI  LQL CWVSAA  TF    ALLPHKQ     +S +AV+   +K  E 
Sbjct: 1   MKGTY---WCFIFILQLVCWVSAAARTFAPNPALLPHKQG--LIESKQAVKG--IKEEEF 60

Query: 61  YRGMRKIGSSPPSCEHKCYGCTPCEAIQVP-TNNRRSHVGIQYTNYEPEGWKCKCGPSFY 118
           YRGMRKIGSSPPSCEHKCYGC PCEAIQVP T NRRSH+G+QYTNYEPEGWKCKCGPSFY
Sbjct: 61  YRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHIGVQYTNYEPEGWKCKCGPSFY 115

[Close]
BLAST of CmoCh14G012840 vs. ExPASy TrEMBL
Match: A0A5D3BVF6 (Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G00550 PE=3 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 7.7e-40
Identity = 88/122 (72.13%), Postives = 94/122 (77.05%), Query Frame = 0 

Query: 1   MKGTYRCCCCFILTLQLACWVSAATTTF----ALLPHKQQGFNFDSVKAVEEGVVKGGEV 60
           MKGTY    CFI  LQL CWVSAA  TF    ALLPHKQ     +S +AV+   +K  E 
Sbjct: 1   MKGTY---WCFIFILQLVCWVSAAARTFAPNPALLPHKQG--LIESKQAVKG--IKEEEF 60

Query: 61  YRGMRKIGSSPPSCEHKCYGCTPCEAIQVP-TNNRRSHVGIQYTNYEPEGWKCKCGPSFY 118
           YRGMRKIGSSPPSCEHKCYGC PCEAIQVP T NRRSH+G+QYTNYEPEGWKCKCGPSFY
Sbjct: 61  YRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHIGVQYTNYEPEGWKCKCGPSFY 115

[Close]
BLAST of CmoCh14G012840 vs. ExPASy TrEMBL
Match: A0A6J1DIF6 (Epidermal patterning factor-like protein OS=Momordica charantia OX=3673 GN=LOC111020335 PE=3 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 2.5e-38
Identity = 85/127 (66.93%), Postives = 95/127 (74.80%), Query Frame = 0 

Query: 1   MKGTYRCCCCFILTLQLA--CWVSAATTTFA------LLPHKQQ--GFNFDSVKAVEEGV 60
           MKGT+   CCFILTLQ+A  CWVSAAT  FA      LLPHKQ     +FDS +  E   
Sbjct: 1   MKGTF---CCFILTLQIACSCWVSAATRPFAPNHALPLLPHKQGLISGSFDSKEGFE--- 60

Query: 61  VKGGEVYRGMRKIGSSPPSCEHKCYGCTPCEAIQVPTNNRRSHVGIQYTNYEPEGWKCKC 118
                V RGMR+IGSSPPSC+HKCYGC+PCEAIQVPT +R SH+G+QYTNYEPEGWKCKC
Sbjct: 61  ----AVNRGMREIGSSPPSCQHKCYGCSPCEAIQVPTTSRHSHLGVQYTNYEPEGWKCKC 117

[Close]
BLAST of CmoCh14G012840 vs. NCBI nr
Match: XP_022955437.1 (EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita moschata])

HSP 1 Score: 260.8 bits (665), Expect = 5.8e-66
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0 

Query: 1   MKGTYRCCCCFILTLQLACWVSAATTTFALLPHKQQGFNFDSVKAVEEGVVKGGEVYRGM 60
           MKGTYRCCCCFILTLQLACWVSAATTTFALLPHKQQGFNFDSVKAVEEGVVKGGEVYRGM
Sbjct: 1   MKGTYRCCCCFILTLQLACWVSAATTTFALLPHKQQGFNFDSVKAVEEGVVKGGEVYRGM 60

Query: 61  RKIGSSPPSCEHKCYGCTPCEAIQVPTNNRRSHVGIQYTNYEPEGWKCKCGPSFYSP 118
           RKIGSSPPSCEHKCYGCTPCEAIQVPTNNRRSHVGIQYTNYEPEGWKCKCGPSFYSP
Sbjct: 61  RKIGSSPPSCEHKCYGCTPCEAIQVPTNNRRSHVGIQYTNYEPEGWKCKCGPSFYSP 117

[Close]
BLAST of CmoCh14G012840 vs. NCBI nr
Match: XP_022980756.1 (EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita maxima])

HSP 1 Score: 253.1 bits (645), Expect = 1.2e-63
Identity = 114/117 (97.44%), Postives = 115/117 (98.29%), Query Frame = 0 

Query: 1   MKGTYRCCCCFILTLQLACWVSAATTTFALLPHKQQGFNFDSVKAVEEGVVKGGEVYRGM 60
           MKGTY CCCCFILTLQLACWVSAATTTFALLPHKQQGFNFDSVKAVEEGVVK GEVYRGM
Sbjct: 1   MKGTYCCCCCFILTLQLACWVSAATTTFALLPHKQQGFNFDSVKAVEEGVVKEGEVYRGM 60

Query: 61  RKIGSSPPSCEHKCYGCTPCEAIQVPTNNRRSHVGIQYTNYEPEGWKCKCGPSFYSP 118
           RKIGSSPPSCEHKCYGC+PCEAIQVPTNNRRSHVGIQYTNYEPEGWKCKCGPSFYSP
Sbjct: 61  RKIGSSPPSCEHKCYGCSPCEAIQVPTNNRRSHVGIQYTNYEPEGWKCKCGPSFYSP 117

[Close]
BLAST of CmoCh14G012840 vs. NCBI nr
Match: XP_023526549.1 (EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 251.9 bits (642), Expect = 2.7e-63
Identity = 114/117 (97.44%), Postives = 114/117 (97.44%), Query Frame = 0 

Query: 1   MKGTYRCCCCFILTLQLACWVSAATTTFALLPHKQQGFNFDSVKAVEEGVVKGGEVYRGM 60
           MKGTY CCCCFILTLQLACWVSAATTTFALLPHKQQGFN DSVKAVEEGVVK GEVYRGM
Sbjct: 1   MKGTYCCCCCFILTLQLACWVSAATTTFALLPHKQQGFNVDSVKAVEEGVVKEGEVYRGM 60

Query: 61  RKIGSSPPSCEHKCYGCTPCEAIQVPTNNRRSHVGIQYTNYEPEGWKCKCGPSFYSP 118
           RKIGSSPPSCEHKCYGCTPCEAIQVPTNNRRSHVGIQYTNYEPEGWKCKCGPSFYSP
Sbjct: 61  RKIGSSPPSCEHKCYGCTPCEAIQVPTNNRRSHVGIQYTNYEPEGWKCKCGPSFYSP 117

[Close]
BLAST of CmoCh14G012840 vs. NCBI nr
Match: XP_004146810.1 (EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis sativus] >XP_011652341.1 EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis sativus] >XP_011652342.1 EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis sativus] >KAE8651286.1 hypothetical protein Csa_001818 [Cucumis sativus])

HSP 1 Score: 177.2 bits (448), Expect = 8.4e-41
Identity = 91/122 (74.59%), Postives = 94/122 (77.05%), Query Frame = 0 

Query: 1   MKGTYRCCCCFILTLQLACWVSAATTTF----ALLPHKQQGFNFDSVKAVEEGVVKGGEV 60
           MKGTY    CFI  LQL CWVSAA   F    AL PHKQQG   DS +AV+   VK  E 
Sbjct: 1   MKGTY---WCFIFILQLVCWVSAAARNFAPNPALPPHKQQGL-IDSKQAVKG--VKEEEF 60

Query: 61  YRGMRKIGSSPPSCEHKCYGCTPCEAIQVP-TNNRRSHVGIQYTNYEPEGWKCKCGPSFY 118
           YRGMRKIGSSPPSCEHKCYGC PCEAIQVP T NRRSHVG+QYTNYEPEGWKCKCGPSFY
Sbjct: 61  YRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTTTNRRSHVGVQYTNYEPEGWKCKCGPSFY 116

[Close]
BLAST of CmoCh14G012840 vs. NCBI nr
Match: XP_038904354.1 (EPIDERMAL PATTERNING FACTOR-like protein 3 isoform X1 [Benincasa hispida])

HSP 1 Score: 176.4 bits (446), Expect = 1.4e-40
Identity = 90/123 (73.17%), Postives = 93/123 (75.61%), Query Frame = 0 

Query: 1   MKGTYRCCCCFILTLQLACWVSAATTTF----ALLPHKQQGFNFDSVKAVEEGV-VKGGE 60
           MK TY    CFIL LQLACWVSAA  TF    ALLPHKQQG    S+ + E G  V    
Sbjct: 1   MKRTY---WCFILILQLACWVSAAARTFAPNHALLPHKQQGLISGSLDSKEAGKGVNEEA 60

Query: 61  VYRGMRKIGSSPPSCEHKCYGCTPCEAIQVPT-NNRRSHVGIQYTNYEPEGWKCKCGPSF 118
            YRGMRKIGSSPPSCEHKCYGC PCEAIQVPT  NR SHVG+QYTNYEPEGWKCKCGPSF
Sbjct: 61  FYRGMRKIGSSPPSCEHKCYGCIPCEAIQVPTATNRHSHVGVQYTNYEPEGWKCKCGPSF 120

[Close]
BLAST of CmoCh14G012840 vs. TAIR 10
Match: AT3G13898.1 (unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10310.1). )

HSP 1 Score: 87.8 bits (216), Expect = 6.2e-18
Identity = 34/58 (58.62%), Postives = 41/58 (70.69%), Query Frame = 0 

Query: 55  EVYRGMRKIGSSPPSCEHKCYGCTPCEAIQVPTNNRRSHVGIQYTNYEPEGWKCKCGP 113
           E+ +  R+IGS PPSCE KCYGC PCEAIQ PT +   H+   Y NY+PEGW+C C P
Sbjct: 49  EIVKRRRRIGSKPPSCEKKCYGCEPCEAIQFPTISSIPHLSPHYANYQPEGWRCHCPP 106

[Close]
BLAST of CmoCh14G012840 vs. TAIR 10
Match: AT5G10310.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13898.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 67.4 bits (163), Expect = 8.7e-12
Identity = 32/76 (42.11%), Postives = 40/76 (52.63%), Query Frame = 0 

Query: 62  KIGSSPPSCEHKCYGCTPCEAIQVPTNNRRSH--------------------VGIQYTNY 118
           ++GS+PPSC ++C  C PC AIQVPT   RS                     V  QY+NY
Sbjct: 47  RLGSTPPSCHNRCNNCHPCMAIQVPTLPTRSRFTRVNPFSGGFVRPPSSLTTVLDQYSNY 106

[Close]
BLAST of CmoCh14G012840 vs. TAIR 10
Match: AT2G30370.1 (allergen-related )

HSP 1 Score: 62.8 bits (151), Expect = 2.1e-10
Identity = 30/67 (44.78%), Postives = 36/67 (53.73%), Query Frame = 0 

Query: 52  KGGEVYRGMRKIGSSPPSCEHKCYGCTPCEAIQVPTNNRRSHVGIQYT-NYEPEGWKCKC 111
           K  E+ R +R +GSSPP C  KC  CTPC+ + VP        G   T  Y PE W+CKC
Sbjct: 169 KEAELRRILRGLGSSPPRCSSKCGRCTPCKPVHVPV-----PPGTPVTAEYYPEAWRCKC 228

Query: 112 GPSFYSP 118
           G   Y P
Sbjct: 229 GNKLYMP 230

[Close]
BLAST of CmoCh14G012840 vs. TAIR 10
Match: AT2G30370.2 (allergen-related )

HSP 1 Score: 62.8 bits (151), Expect = 2.1e-10
Identity = 30/67 (44.78%), Postives = 36/67 (53.73%), Query Frame = 0 

Query: 52  KGGEVYRGMRKIGSSPPSCEHKCYGCTPCEAIQVPTNNRRSHVGIQYT-NYEPEGWKCKC 111
           K  E+ R +R +GSSPP C  KC  CTPC+ + VP        G   T  Y PE W+CKC
Sbjct: 95  KEAELRRILRGLGSSPPRCSSKCGRCTPCKPVHVPV-----PPGTPVTAEYYPEAWRCKC 154

Query: 112 GPSFYSP 118
           G   Y P
Sbjct: 155 GNKLYMP 156

[Close]
BLAST of CmoCh14G012840 vs. TAIR 10
Match: AT4G14723.1 (BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 54.3 bits (129), Expect = 7.6e-08
Identity = 23/54 (42.59%), Postives = 28/54 (51.85%), Query Frame = 0 

Query: 64  GSSPPSCEHKCYGCTPCEAIQVPTNNRRSHVGIQYTNYEPEGWKCKCGPSFYSP 118
           GSSPP+C  KC  C PC+ + VP     S        Y PE W+CKCG   + P
Sbjct: 60  GSSPPTCRSKCGKCQPCKPVHVPIQPGLS----MPLEYYPEAWRCKCGNKLFMP 109

The following BLAST results are available for this feature:
BLAST of CmoCh14G012840 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
C4B8C48.8e-1758.62EPIDERMAL PATTERNING FACTOR-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=EP... [more]
Q9LFT51.2e-1042.11EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=EP... [more]
Q1PEY63.0e-0944.78EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EP... [more]
Q2V3I31.1e-0642.59EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=EP... [more]
Q9LUH93.1e-0642.59EPIDERMAL PATTERNING FACTOR-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=EP... [more]
BLAST of CmoCh14G012840 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GTM42.8e-66100.00Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
A0A6J1IUG95.8e-6497.44Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC11148... [more]
A0A1S3BIS67.7e-4072.13Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103490030... [more]
A0A5D3BVF67.7e-4072.13Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A6J1DIF62.5e-3866.93Epidermal patterning factor-like protein OS=Momordica charantia OX=3673 GN=LOC11... [more]
BLAST of CmoCh14G012840 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022955437.15.8e-66100.00EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita moschata][more]
XP_022980756.11.2e-6397.44EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita maxima][more]
XP_023526549.12.7e-6397.44EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita pepo subsp. pepo][more]
XP_004146810.18.4e-4174.59EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis sativus] >XP_011652341.1 EPI... [more]
XP_038904354.11.4e-4073.17EPIDERMAL PATTERNING FACTOR-like protein 3 isoform X1 [Benincasa hispida][more]
BLAST of CmoCh14G012840 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G13898.16.2e-1858.62unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana prot... [more]
AT5G10310.18.7e-1242.11unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G30370.12.1e-1044.78allergen-related [more]
AT2G30370.22.1e-1044.78allergen-related [more]
AT4G14723.17.6e-0842.59BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1);... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF17181EPFcoord: 62..117
e-value: 4.8E-21
score: 74.5
NoneNo IPR availablePANTHERPTHR33109:SF14EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 3coord: 7..117
IPR039455EPIDERMAL PATTERNING FACTOR-like proteinPANTHERPTHR33109EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4coord: 7..117

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh14G012840.1CmoCh14G012840.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010052 guard cell differentiation
biological_process GO:0010374 stomatal complex development
cellular_component GO:0005576 extracellular region