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CmoCh14G011950 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAAAAGGCTTTGCCTTTTGGTGGCAGTGGTGGCGATGGTGGTGCTGCTCACTGGAGCTGGAGTGGCAGAGGCGGTGAAGTGCGATCCGATGGAGATGAGAGCATGTCTTCCTGCAATCAAATCCTCAGAGCCGCCGACAGCGGAATGCTGTGATAAAGTGAAGAAGCAAGAGGGATGCCTTTGTGAATACCTGAAAAGCCCAATATTGAAGCCTTATTTAGAGTCACCCAATGCTAAAAAGATAGCTTCTTCCTGTGGGGTTCCCATCCCCACCTGCTAG ATGAAGAAAAGGCTTTGCCTTTTGGTGGCAGTGGTGGCGATGGTGGTGCTGCTCACTGGAGCTGGAGTGGCAGAGGCGGTGAAGTGCGATCCGATGGAGATGAGAGCATGTCTTCCTGCAATCAAATCCTCAGAGCCGCCGACAGCGGAATGCTGTGATAAAGTGAAGAAGCAAGAGGGATGCCTTTGTGAATACCTGAAAAGCCCAATATTGAAGCCTTATTTAGAGTCACCCAATGCTAAAAAGATAGCTTCTTCCTGTGGGGTTCCCATCCCCACCTGCTAG ATGAAGAAAAGGCTTTGCCTTTTGGTGGCAGTGGTGGCGATGGTGGTGCTGCTCACTGGAGCTGGAGTGGCAGAGGCGGTGAAGTGCGATCCGATGGAGATGAGAGCATGTCTTCCTGCAATCAAATCCTCAGAGCCGCCGACAGCGGAATGCTGTGATAAAGTGAAGAAGCAAGAGGGATGCCTTTGTGAATACCTGAAAAGCCCAATATTGAAGCCTTATTTAGAGTCACCCAATGCTAAAAAGATAGCTTCTTCCTGTGGGGTTCCCATCCCCACCTGCTAG MKKRLCLLVAVVAMVVLLTGAGVAEAVKCDPMEMRACLPAIKSSEPPTAECCDKVKKQEGCLCEYLKSPILKPYLESPNAKKIASSCGVPIPTC Homology
BLAST of CmoCh14G011950 vs. ExPASy Swiss-Prot
Match: Q43681 (Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata OX=3917 PE=2 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 1.5e-19 Identity = 46/95 (48.42%), Postives = 64/95 (67.37%), Query Frame = 0
BLAST of CmoCh14G011950 vs. ExPASy Swiss-Prot
Match: P82353 (Non-specific lipid-transfer protein 2 OS=Prunus armeniaca OX=36596 PE=1 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 7.8e-16 Identity = 34/68 (50.00%), Postives = 47/68 (69.12%), Query Frame = 0
BLAST of CmoCh14G011950 vs. ExPASy Swiss-Prot
Match: P20145 (Probable non-specific lipid-transfer protein OS=Hordeum vulgare OX=4513 GN=LTP2 PE=2 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 3.3e-14 Identity = 34/94 (36.17%), Postives = 53/94 (56.38%), Query Frame = 0
BLAST of CmoCh14G011950 vs. ExPASy Swiss-Prot
Match: A2XBN5 (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=LTP-2 PE=3 SV=2) HSP 1 Score: 79.0 bits (193), Expect = 3.3e-14 Identity = 40/95 (42.11%), Postives = 54/95 (56.84%), Query Frame = 0
BLAST of CmoCh14G011950 vs. ExPASy Swiss-Prot
Match: Q10ST8 (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=LTP-2 PE=1 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 1.2e-13 Identity = 39/95 (41.05%), Postives = 54/95 (56.84%), Query Frame = 0
BLAST of CmoCh14G011950 vs. ExPASy TrEMBL
Match: A0A0A0KW09 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G141230 PE=4 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 1.7e-29 Identity = 67/93 (72.04%), Postives = 80/93 (86.02%), Query Frame = 0
BLAST of CmoCh14G011950 vs. ExPASy TrEMBL
Match: A0A5A7VF50 (Non-specific lipid-transfer protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold218G00770 PE=4 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 3.2e-28 Identity = 65/93 (69.89%), Postives = 78/93 (83.87%), Query Frame = 0
BLAST of CmoCh14G011950 vs. ExPASy TrEMBL
Match: A0A5N5G8U2 (Non-specific lipid-transfer protein 2-like OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_019891 PE=3 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 2.2e-21 Identity = 50/89 (56.18%), Postives = 68/89 (76.40%), Query Frame = 0
BLAST of CmoCh14G011950 vs. ExPASy TrEMBL
Match: A0A4S4CYQ9 (AAI domain-containing protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_017064 PE=4 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 4.9e-21 Identity = 53/96 (55.21%), Postives = 71/96 (73.96%), Query Frame = 0
BLAST of CmoCh14G011950 vs. ExPASy TrEMBL
Match: A0A6A4L2T0 (AAI domain-containing protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3L33_18628 PE=4 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 1.1e-20 Identity = 52/96 (54.17%), Postives = 71/96 (73.96%), Query Frame = 0
BLAST of CmoCh14G011950 vs. NCBI nr
Match: KAG6581740.1 (hypothetical protein SDJN03_21742, partial [Cucurbita argyrosperma subsp. sororia] >KAG6581742.1 hypothetical protein SDJN03_21744, partial [Cucurbita argyrosperma subsp. sororia] >KAG6581745.1 hypothetical protein SDJN03_21747, partial [Cucurbita argyrosperma subsp. sororia] >KAG6581746.1 hypothetical protein SDJN03_21748, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 182.2 bits (461), Expect = 2.1e-42 Identity = 89/94 (94.68%), Postives = 91/94 (96.81%), Query Frame = 0
BLAST of CmoCh14G011950 vs. NCBI nr
Match: XP_023527041.1 (non-specific lipid-transfer protein 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 176.0 bits (445), Expect = 1.5e-40 Identity = 86/94 (91.49%), Postives = 90/94 (95.74%), Query Frame = 0
BLAST of CmoCh14G011950 vs. NCBI nr
Match: KGN53815.1 (hypothetical protein Csa_014873 [Cucumis sativus]) HSP 1 Score: 138.3 bits (347), Expect = 3.5e-29 Identity = 67/93 (72.04%), Postives = 80/93 (86.02%), Query Frame = 0
BLAST of CmoCh14G011950 vs. NCBI nr
Match: KAA0064159.1 (non-specific lipid-transfer protein 2-like [Cucumis melo var. makuwa] >TYK02870.1 non-specific lipid-transfer protein 2-like [Cucumis melo var. makuwa]) HSP 1 Score: 134.0 bits (336), Expect = 6.5e-28 Identity = 65/93 (69.89%), Postives = 78/93 (83.87%), Query Frame = 0
BLAST of CmoCh14G011950 vs. NCBI nr
Match: KAB2611859.1 (non-specific lipid-transfer protein 2-like [Pyrus ussuriensis x Pyrus communis]) HSP 1 Score: 111.3 bits (277), Expect = 4.5e-21 Identity = 50/89 (56.18%), Postives = 68/89 (76.40%), Query Frame = 0
BLAST of CmoCh14G011950 vs. TAIR 10
Match: AT1G48750.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 91.3 bits (225), Expect = 4.5e-19 Identity = 40/94 (42.55%), Postives = 64/94 (68.09%), Query Frame = 0
BLAST of CmoCh14G011950 vs. TAIR 10
Match: AT3G18280.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 88.6 bits (218), Expect = 2.9e-18 Identity = 42/94 (44.68%), Postives = 63/94 (67.02%), Query Frame = 0
BLAST of CmoCh14G011950 vs. TAIR 10
Match: AT1G07747.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 77.0 bits (188), Expect = 8.8e-15 Identity = 36/94 (38.30%), Postives = 56/94 (59.57%), Query Frame = 0
BLAST of CmoCh14G011950 vs. TAIR 10
Match: AT5G38160.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 75.1 bits (183), Expect = 3.4e-14 Identity = 32/88 (36.36%), Postives = 54/88 (61.36%), Query Frame = 0
BLAST of CmoCh14G011950 vs. TAIR 10
Match: AT2G14846.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 74.7 bits (182), Expect = 4.4e-14 Identity = 30/70 (42.86%), Postives = 45/70 (64.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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