CmoCh14G011710 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh14G011710
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr14: 9551103 .. 9551912 (+)
RNA-Seq ExpressionCmoCh14G011710
SyntenyCmoCh14G011710
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAATTGGCATTCGGCAATCGGCAATTGGCAATTGGCAAGTGGGGCCTCGTTTTTTCTCATCGACAGGACGCTTGTGGTCGCCGATTTCCCCTTTTTCAATTTTTGAAGGGGAAACCGATAGAATTCGCAATCACAATCCTGTTTTCAACACAAAACGGAGTAATTCTCCGGAGGCGGAGAGATTAGAAGATAAACTATCAACTACCCATATTCTCGTCTCTATCCTTTTTAGTCAATTCGTATTTTGTATGCGTACATATGGTACCGATACCCTTTTGATATTTGCGTGTGTTCTTATCTCTCTTTTCTTCGCCATTGCCCCAGAGACGTGATTATTCCGCTTTTTTCTCCTAATTGCATTATTGACCATTCTGTTCTTGGCTGAAAGTGAATCCCATTCCGGATCTTCTTGTTCGGGAGTTGAGTTTCTTTGATTGCCTTGTCTGATAAAAGGGGTCTGCGTTAATCTCCTCTTTCCGATCTTAAGAACCCAGGTTTTGATCTTACTTATACTAGCTCTCGATTCATTTTCTTCGCTTCCTGTTTCTGATTCGATTCTATTTCATTTCAGAAGTGTTTGATTTTCCGGTTAATCGGATTGTTTTAAAATTTTTACAAGGAGCTGAGTATTTAGATTCTGGTGGTTTCTGTTAAAAGTAGCCATTGACTGCATACGATCCTTTACCGCGAAGTCTTGAAAGTTCATCTATCAGGTGGAGTTATGTTACTTTTGGAATCTCGACAGCCTATGTCAGATTTATGCCAAATTCTTATGTTGTTTTTCTTGCAGATTGCTTGAAAATTAG

mRNA sequence

ATGGCAATTGGCATTCGGCAATCGGCAATTGGCAATTGGCAAGTGGGGCCTCGTTTTTTCTCATCGACAGGACGCTTGTGGTCGCCGATTTCCCCTTTTTCAATTTTTGAAGGGGAAACCGATAGAATTCGCAATCACAATCCTGTTTTCAACACAAAACGGAGTAATTCTCCGGAGGCGGAGAGATTAGAAGATAAACTATCAACTACCCATATTCTCGTCTCTATCCTTTTTAGTCAATTCGTATTTTGTATGCGTACATATGGTACCGATACCCTTTTGATATTTGCGTGTGTTCTTATCTCTCTTTTCTTCGCCATTGCCCCAGAGACATTGCTTGAAAATTAG

Coding sequence (CDS)

ATGGCAATTGGCATTCGGCAATCGGCAATTGGCAATTGGCAAGTGGGGCCTCGTTTTTTCTCATCGACAGGACGCTTGTGGTCGCCGATTTCCCCTTTTTCAATTTTTGAAGGGGAAACCGATAGAATTCGCAATCACAATCCTGTTTTCAACACAAAACGGAGTAATTCTCCGGAGGCGGAGAGATTAGAAGATAAACTATCAACTACCCATATTCTCGTCTCTATCCTTTTTAGTCAATTCGTATTTTGTATGCGTACATATGGTACCGATACCCTTTTGATATTTGCGTGTGTTCTTATCTCTCTTTTCTTCGCCATTGCCCCAGAGACATTGCTTGAAAATTAG

Protein sequence

MAIGIRQSAIGNWQVGPRFFSSTGRLWSPISPFSIFEGETDRIRNHNPVFNTKRSNSPEAERLEDKLSTTHILVSILFSQFVFCMRTYGTDTLLIFACVLISLFFAIAPETLLEN
Homology
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BLAST of CmoCh14G011710 vs. NCBI nr
Match: KAG6581708.1 (hypothetical protein SDJN03_21710, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 185.7 bits (470), Expect = 2.3e-43
Identity = 91/96 (94.79%), Postives = 92/96 (95.83%), Query Frame = 0 

Query: 1  MAIGIRQSAIGNWQVGPRFFSSTGRLWSPISPFSIFEGETDRIRNHNPVFNTKRSNSPEA 60
          MAIGIRQSAIGNWQVGPRFFSSTGRLWSPISPFSIFEGETDRIRNHNPVFNTKRSNSPEA
Sbjct: 1  MAIGIRQSAIGNWQVGPRFFSSTGRLWSPISPFSIFEGETDRIRNHNPVFNTKRSNSPEA 60

Query: 61 ERLEDKLSTTHILVSILFSQFVFCMRTYGTDTLLIF 97
          ERLEDKLSTTHILVSILFSQFVFCMRTYG    L+F
Sbjct: 61 ERLEDKLSTTHILVSILFSQFVFCMRTYGVCVNLLF 96

The following BLAST results are available for this feature:
BLAST of CmoCh14G011710 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh14G011710 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh14G011710 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6581708.12.3e-4394.79hypothetical protein SDJN03_21710, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of CmoCh14G011710 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh14G011710.1CmoCh14G011710.1mRNA