CmoCh14G010840 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh14G010840
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	SNARE associated Golgi protein family
Location	Cmo_Chr14: 6115791 .. 6118040 (+)
RNA-Seq Expression	CmoCh14G010840
Synteny	CmoCh14G010840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCCGCAAGCTTCACAGTGCACATTTAAGACGATCGGTGGTAGTTTCGGCGCCGGACGGTTTCGACCACAATCAAATCTCGAGAGAGATAGAGAGATGGGAGCTGGGTGGGGACGGTGGTCCAAATTAGCCGCCGTTGTGGCGGTGGTGGCGATTCTAAGAGAATTAGGGAAGCTATACGGATGGGAAATTGACAGAGAAGCAGCTCTCAAGGTTTTCGGCCAATGGTCAGATCGCTTGGGGGTATGGGCCATGCCTGCGTATGTCGGCGTCCATACCTTCACACTTGCACTCTGTTTGCCTTATGCCGTCTTCTTCGAAGCCACTGCTTCTTTGCTCTTCGGCTTCTTCCCTGCCGTCATTTGCGTGTTCTCTGCCAAGGTGCTTGGGGCTTCCCTCTCCTTCTGGATCGGCAGGTTTGATCTCTAATTTCTTGCCATATGATTTTGCTTTATTAGATTCTGAGTTTAAGGCTTATGATATATCGTAATATGAAATCGTCTGCTCGTTGTATGGAATTAGGTTGGAATTTTCTAGCTATAGTTTAAGATGTGTTTGTTGATTGGACAGTTTTCTTTTGTTCGCATCTTGGGATCTTTTATCTGTTCTATATTTTAATTGTAAGTGGATGCCACGAAATGGATTCCTTTTCGCTGATGCTTTAGTTTGAAGATGATGTTCAAGACGTCCTTAGTCTGTGTAGATAAGTGAAATGATACACGTTTTGCTGGTTGTACATAAGAATCGTTAGCATTGTGTTCAAAAGAATCTTTGCTTGGCATCTAAAGGGATGGGATAGCCACAAAGAAGCTGAATTAGAGCTACCGCATTATGTTAGGGAAGTACTGATGTAGGTTAAATTGATTAAATGACTCCACCCATCTTTTAGCTGGAAAGGTGCCATGAAAGTAGAGGTAATCTAGTCATCTGATGGTCTTTTACAAAAAAGCGCTCAAACTTGTGGACTAAGTATAGTTATGATGTTCTACAATTTGTTGCTAGTCGGCAACCGATCATGGAGTTTTAGATTTCCAAATACCTTTTGTCTAAGCAGATACCAAGGATTTGTTTCATTTGAAAAAGTTGTAGAAACAGGGATCCAATGATTTTTAAAAAAACAGCACACTCCCTCCATTGATGAGCTTTTTGAGGTCAACATACTTGAATGGATGCCAGAGAGTAGTGGATTCTTTACCTGCAAATTGGTGTTCGTACACAATCCACCTTTAGCAGAAAACAAAGGGTTGTTGTATGACTCTTCATTTCTTTAGCTATCATCAATGATTGCAATCAACCATTTAGAATTGATTAATATATGCATTTCAAAGTTAGTTTGACCAATAAATTGCTTGTTTTTCTAATATACTTTATTTCTGTCATCTTTTTGATTGGGATGTGGTGATCTGACTGGCTTTATTTGATTGTTTATATAAAATGTTTGAAGAGTCACTTGATTGGTTCTTTTGAATTTCCGTTCTCTATCCCTCTTCTCAATCTCAAGCCAAGGTCATCTTCTGTTCAGGTTACTTTTTAAGAATTCAAGTTCAGCTATGGAGTGGGCCCAGAGGAACAAATACTTCCATCTTCTTTCTAGAGGAGTAGAGCAAGATGGATGGAAATTTGTCCTTCTTGCCCGCTTTTCACCGATCCCCTCGTACGTTATAAATTATGCTCTTGCTGCAACCAAAGTTGGGTTCTTTCTAGACTTTCTGCTACCTACTGTAATCGGATGCATGCCGATGATACTTCAGAACACGTCGATTGGCAGTCTCGCCGGTGCTGCAGTTGCTTCAGCGTCTGGCTCCCAGAAATCTCAGATATGGTCATACATTTTTCCTGTACTTGGTATTGGGTCGAGCATTCTTATTTCCTTGAGGATTAAAAAGTACTCTAGTGGACTCAAAATGGCCGAAAGTTCCTCTAGTGTTGAAAGGAGTGACAGTGTTGAGCCATCCAAAGCCAAGGAGTTTAAGAAAACTCAATAGTTTTTAGTAACAGATGAGTTATTTACAAACTCTTAGATGATATATTTTCATTCATGATATTCATACCCTGGAGATCAGTGTCTACGACGTTTTTCCCCTTAAGAAGTTAGTAGATTTATGGCCTATTTTAGTCTTACACTTTACTGTAATTGATCTCGATTGTTTTATACATTCCATCATATATACTTGATATCTATTTATCATACTATACTATGAAATTATATCTTTTACCTTGTATGAAGTTTGTCATAAATACTTCAGTAATC

mRNA sequence

ATCCGCAAGCTTCACAGTGCACATTTAAGACGATCGGTGGTAGTTTCGGCGCCGGACGGTTTCGACCACAATCAAATCTCGAGAGAGATAGAGAGATGGGAGCTGGGTGGGGACGGTGGTCCAAATTAGCCGCCGTTGTGGCGGTGGTGGCGATTCTAAGAGAATTAGGGAAGCTATACGGATGGGAAATTGACAGAGAAGCAGCTCTCAAGGTTTTCGGCCAATGGTCAGATCGCTTGGGGGTATGGGCCATGCCTGCGTATGTCGGCGTCCATACCTTCACACTTGCACTCTGTTTGCCTTATGCCGTCTTCTTCGAAGCCACTGCTTCTTTGCTCTTCGGCTTCTTCCCTGCCGTCATTTGCGTGTTCTCTGCCAAGGTGCTTGGGGCTTCCCTCTCCTTCTGGATCGGCAGGTTACTTTTTAAGAATTCAAGTTCAGCTATGGAGTGGGCCCAGAGGAACAAATACTTCCATCTTCTTTCTAGAGGAGTAGAGCAAGATGGATGGAAATTTGTCCTTCTTGCCCGCTTTTCACCGATCCCCTCGTACGTTATAAATTATGCTCTTGCTGCAACCAAAGTTGGGTTCTTTCTAGACTTTCTGCTACCTACTGTAATCGGATGCATGCCGATGATACTTCAGAACACGTCGATTGGCAGTCTCGCCGGTGCTGCAGTTGCTTCAGCGTCTGGCTCCCAGAAATCTCAGATATGGTCATACATTTTTCCTGTACTTGGTATTGGGTCGAGCATTCTTATTTCCTTGAGGATTAAAAAGTACTCTAGTGGACTCAAAATGGCCGAAAGTTCCTCTAGTGTTGAAAGGAGTGACAGTGTTGAGCCATCCAAAGCCAAGGAGTTTAAGAAAACTCAATAGTTTTTAGTAACAGATGAGTTATTTACAAACTCTTAGATGATATATTTTCATTCATGATATTCATACCCTGGAGATCAGTGTCTACGACGTTTTTCCCCTTAAGAAGTTAGTAGATTTATGGCCTATTTTAGTCTTACACTTTACTGTAATTGATCTCGATTGTTTTATACATTCCATCATATATACTTGATATCTATTTATCATACTATACTATGAAATTATATCTTTTACCTTGTATGAAGTTTGTCATAAATACTTCAGTAATC

Coding sequence (CDS)

ATGGGAGCTGGGTGGGGACGGTGGTCCAAATTAGCCGCCGTTGTGGCGGTGGTGGCGATTCTAAGAGAATTAGGGAAGCTATACGGATGGGAAATTGACAGAGAAGCAGCTCTCAAGGTTTTCGGCCAATGGTCAGATCGCTTGGGGGTATGGGCCATGCCTGCGTATGTCGGCGTCCATACCTTCACACTTGCACTCTGTTTGCCTTATGCCGTCTTCTTCGAAGCCACTGCTTCTTTGCTCTTCGGCTTCTTCCCTGCCGTCATTTGCGTGTTCTCTGCCAAGGTGCTTGGGGCTTCCCTCTCCTTCTGGATCGGCAGGTTACTTTTTAAGAATTCAAGTTCAGCTATGGAGTGGGCCCAGAGGAACAAATACTTCCATCTTCTTTCTAGAGGAGTAGAGCAAGATGGATGGAAATTTGTCCTTCTTGCCCGCTTTTCACCGATCCCCTCGTACGTTATAAATTATGCTCTTGCTGCAACCAAAGTTGGGTTCTTTCTAGACTTTCTGCTACCTACTGTAATCGGATGCATGCCGATGATACTTCAGAACACGTCGATTGGCAGTCTCGCCGGTGCTGCAGTTGCTTCAGCGTCTGGCTCCCAGAAATCTCAGATATGGTCATACATTTTTCCTGTACTTGGTATTGGGTCGAGCATTCTTATTTCCTTGAGGATTAAAAAGTACTCTAGTGGACTCAAAATGGCCGAAAGTTCCTCTAGTGTTGAAAGGAGTGACAGTGTTGAGCCATCCAAAGCCAAGGAGTTTAAGAAAACTCAATAG

Protein sequence

MGAGWGRWSKLAAVVAVVAILRELGKLYGWEIDREAALKVFGQWSDRLGVWAMPAYVGVHTFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFKNSSSAMEWAQRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPMILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISLRIKKYSSGLKMAESSSSVERSDSVEPSKAKEFKKTQ

Homology

[Close]

BLAST of CmoCh14G010840 vs. ExPASy TrEMBL
Match: A0A6J1F1R5 (uncharacterized protein LOC111441406 OS=Cucurbita moschata OX=3662 GN=LOC111441406 PE=4 SV=1)

HSP 1 Score: 502.7 bits (1293), Expect = 9.4e-139
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MGAGWGRWSKLAAVVAVVAILRELGKLYGWEIDREAALKVFGQWSDRLGVWAMPAYVGVH 60
           MGAGWGRWSKLAAVVAVVAILRELGKLYGWEIDREAALKVFGQWSDRLGVWAMPAYVGVH
Sbjct: 1   MGAGWGRWSKLAAVVAVVAILRELGKLYGWEIDREAALKVFGQWSDRLGVWAMPAYVGVH 60

Query: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFKNSSSAMEWA 120
           TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFKNSSSAMEWA
Sbjct: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFKNSSSAMEWA 120

Query: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180
           QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM
Sbjct: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180

Query: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISLRIKKYSSGLKMAESSS 240
           ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISLRIKKYSSGLKMAESSS
Sbjct: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISLRIKKYSSGLKMAESSS 240

Query: 241 SVERSDSVEPSKAKEFKKTQ 261
           SVERSDSVEPSKAKEFKKTQ
Sbjct: 241 SVERSDSVEPSKAKEFKKTQ 260

[Close]

BLAST of CmoCh14G010840 vs. ExPASy TrEMBL
Match: A0A6J1J5V4 (uncharacterized protein LOC111481545 OS=Cucurbita maxima OX=3661 GN=LOC111481545 PE=4 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 1.3e-132
Identity = 251/260 (96.54%), Postives = 252/260 (96.92%), Query Frame = 0


Query: 1   MGAGWGRWSKLAAVVAVVAILRELGKLYGWEIDREAALKVFGQWSDRLGVWAMPAYVGVH 60
           MGAGWGRWSKLAAVVAVVAILRELGKLYGWEIDREAALKVFG WSDRLGVWAMPAYVG+H
Sbjct: 1   MGAGWGRWSKLAAVVAVVAILRELGKLYGWEIDREAALKVFGHWSDRLGVWAMPAYVGIH 60

Query: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFKNSSSAMEWA 120
           TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFKNSSSAMEWA
Sbjct: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFKNSSSAMEWA 120

Query: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180
           QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM
Sbjct: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180

Query: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISLRIKKYSSGLKMAESSS 240
           ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISLRIKKYSSGLKMAESSS
Sbjct: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISLRIKKYSSGLKMAESSS 240

Query: 241 SVERSDSVEPSKAKEFKKTQ 261
                 SVEPSK KEFKKTQ
Sbjct: 241 ------SVEPSKTKEFKKTQ 254

[Close]

BLAST of CmoCh14G010840 vs. ExPASy TrEMBL
Match: A0A0A0LFP4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G845510 PE=4 SV=1)

HSP 1 Score: 469.9 bits (1208), Expect = 6.7e-129
Identity = 241/260 (92.69%), Postives = 250/260 (96.15%), Query Frame = 0


Query: 1   MGAGWGRWSKLAAVVAVVAILRELGKLYGWEIDREAALKVFGQWSDRLGVWAMPAYVGVH 60
           MGA WGRWSKLAA+VAVVAILR+LGK YGWE DR+AALKVF QWSDRLGVWAMPAYVG+H
Sbjct: 1   MGAAWGRWSKLAAIVAVVAILRQLGKTYGWEFDRDAALKVFTQWSDRLGVWAMPAYVGIH 60

Query: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFKNSSSAMEWA 120
           TFTLALCLPYAVFFEATASLLFGFFPAVICVF AKVLGASLSFWIGRLLFKNSSSAMEWA
Sbjct: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFFAKVLGASLSFWIGRLLFKNSSSAMEWA 120

Query: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180
           QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM
Sbjct: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180

Query: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISLRIKKYSSGLKMAESSS 240
           ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILIS RIKKYSSGLK+A SSS
Sbjct: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSSGLKVAGSSS 240

Query: 241 SVERSDSVEPSKAKEFKKTQ 261
           S E +D+V+PSK KEFKKT+
Sbjct: 241 SDEGNDNVDPSKTKEFKKTR 260

[Close]

BLAST of CmoCh14G010840 vs. ExPASy TrEMBL
Match: A0A6J1DDR9 (uncharacterized protein LOC111020123 OS=Momordica charantia OX=3673 GN=LOC111020123 PE=4 SV=1)

HSP 1 Score: 468.0 bits (1203), Expect = 2.6e-128
Identity = 239/260 (91.92%), Postives = 250/260 (96.15%), Query Frame = 0


Query: 1   MGAGWGRWSKLAAVVAVVAILRELGKLYGWEIDREAALKVFGQWSDRLGVWAMPAYVGVH 60
           MGAGW RWSKLAA VAVVAILRELGK YGWEID+EAA++V GQWSDRLG+WAMPAYVG+H
Sbjct: 1   MGAGWRRWSKLAAAVAVVAILRELGKRYGWEIDKEAAIEVVGQWSDRLGIWAMPAYVGIH 60

Query: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFKNSSSAMEWA 120
           TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLF+NS SAMEWA
Sbjct: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFRNSKSAMEWA 120

Query: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180
           QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGC+PM
Sbjct: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCLPM 180

Query: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISLRIKKYSSGLKMAESSS 240
           ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILIS RIKKYSSGLKMAESSS
Sbjct: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISWRIKKYSSGLKMAESSS 240

Query: 241 SVERSDSVEPSKAKEFKKTQ 261
           SVE SDSV+ SK ++ KKT+
Sbjct: 241 SVEGSDSVDTSKTRDLKKTR 260

[Close]

BLAST of CmoCh14G010840 vs. ExPASy TrEMBL
Match: A0A1S3CN62 (uncharacterized protein LOC103502831 OS=Cucumis melo OX=3656 GN=LOC103502831 PE=4 SV=1)

HSP 1 Score: 464.9 bits (1195), Expect = 2.2e-127
Identity = 240/260 (92.31%), Postives = 245/260 (94.23%), Query Frame = 0


Query: 1   MGAGWGRWSKLAAVVAVVAILRELGKLYGWEIDREAALKVFGQWSDRLGVWAMPAYVGVH 60
           M   WGRWSKLAA+VA VAILRELGK YGWE DREAALKVF QWSDRLGVWAMPAYVG+H
Sbjct: 1   MAPAWGRWSKLAALVAAVAILRELGKRYGWEFDREAALKVFTQWSDRLGVWAMPAYVGIH 60

Query: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFKNSSSAMEWA 120
           TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLF NSSSAMEWA
Sbjct: 61  TFTLALCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFTNSSSAMEWA 120

Query: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180
           QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM
Sbjct: 121 QRNKYFHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPM 180

Query: 181 ILQNTSIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISLRIKKYSSGLKMAESSS 240
           ILQNTSIGSLAGAAVASASGS KSQIWSYIFPVLGIGSSILIS RIKKYSSGLKM  SSS
Sbjct: 181 ILQNTSIGSLAGAAVASASGSHKSQIWSYIFPVLGIGSSILISWRIKKYSSGLKMTGSSS 240

Query: 241 SVERSDSVEPSKAKEFKKTQ 261
           S E +D+V+PSK KEFKKTQ
Sbjct: 241 SDEGNDNVDPSKTKEFKKTQ 260

[Close]

BLAST of CmoCh14G010840 vs. TAIR 10
Match: AT1G44960.1 (SNARE associated Golgi protein family )

HSP 1 Score: 327.8 bits (839), Expect = 8.0e-90
Identity = 165/240 (68.75%), Postives = 196/240 (81.67%), Query Frame = 0


Query: 7   RWSKLAAVVAVVAILRELGKL-YGWEIDREAALKVFGQWSDRLGVWAMPAYVGVHTFTLA 66
           +W  +AA VA++AI+   G   YGW  ++EAAL+   +WSDRLG+WA+P YV VHT TLA
Sbjct: 3   KWLAIAATVAIIAIIVRQGTTQYGW--NKEAALEKLKEWSDRLGIWAIPTYVAVHTITLA 62

Query: 67  LCLPYAVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFKNSSSAMEWAQRNKY 126
           LCLP+AVFFEA AS+LFGF PA++CVFSAKVL AS SFWIGR +FK+S+ A  WA  NKY
Sbjct: 63  LCLPHAVFFEAGASMLFGFLPALLCVFSAKVLAASFSFWIGRFVFKSSTRATGWAHSNKY 122

Query: 127 FHLLSRGVEQDGWKFVLLARFSPIPSYVINYALAATKVGFFLDFLLPTVIGCMPMILQNT 186
           F++LSRGVE+DGWKFVLLARFSPIPSYVINYALAAT+V F  DFL PTVIGC+PMILQN 
Sbjct: 123 FNILSRGVERDGWKFVLLARFSPIPSYVINYALAATEVRFVADFLFPTVIGCLPMILQNA 182

Query: 187 SIGSLAGAAVASASGSQKSQIWSYIFPVLGIGSSILISLRIKKYSSGLKMAESSSSVERS 246
           S+GSLAG AVAS +G QKSQ+W Y+FPVLGI SS+LISLRIKKYS+G+  A S +S   S
Sbjct: 183 SVGSLAGMAVASVAGKQKSQVWGYVFPVLGILSSVLISLRIKKYSAGITEASSDTSANNS 240

[Close]

BLAST of CmoCh14G010840 vs. TAIR 10
Match: AT1G22850.1 (SNARE associated Golgi protein family )

HSP 1 Score: 43.9 bits (102), Expect = 2.3e-04
Identity = 46/190 (24.21%), Postives = 83/190 (43.68%), Query Frame = 0


Query: 11  LAAVVAVVAILRELGKLYGWEIDREAALKVFGQWSDRLGVWAMPAYVGVHTFTLALCLPY 70
           LA V+ +  +    G  Y +       L  F  + +  G      ++ V+     L +P 
Sbjct: 111 LAGVLLIGTVGGFAGVGYVYRDQINTFLTQFSTYIEGYGTAGYALFIAVYAGLEILAIP- 170

Query: 71  AVFFEATASLLFGFFPAVICVFSAKVLGASLSFWIGRLLFKNSSSAMEWAQRNKYFHLLS 130
           A+    +A LLFG     I V  +  + AS++F I R   +     ++  + NK F  + 
Sbjct: 171 ALPLTMSAGLLFGPLIGTIIVSISGTMAASVAFLIARYFAR--ERILKLVEDNKKFLAID 230

Query: 131 RGVEQDGWKFVLLARFSP-IPSYVINYALAATKVGFFLDFLLPTVIGCMPMILQNTSIGS 190
           + + ++G++ V L R SP +P  + NY    T V  F+ ++L + +G +P      S G+
Sbjct: 231 KAIGENGFRVVTLLRLSPLLPFSLGNYLYGLTSVK-FVPYVLGSWLGMLPGSWAYVSAGA 290

Query: 191 LAGAAVASAS 200
              A +   S
Sbjct: 291 FGRAIIQEES 296

[Close]

BLAST of CmoCh14G010840 vs. TAIR 10
Match: AT1G03260.1 (SNARE associated Golgi protein family )

HSP 1 Score: 43.9 bits (102), Expect = 2.3e-04
Identity = 50/214 (23.36%), Postives = 95/214 (44.39%), Query Frame = 0


Query: 35  EAALKVFGQW-SDRLGVWAMPAYVGVHTFTLALCLPYAVFFEATASLLFGFFPAVICVFS 94
           E  LK F  W  + LG +  P  + +    L +    A         LFG     +    
Sbjct: 33  EQKLKDFLLWIKEDLGPFG-PLALALAYIPLTIVAVPASVLTLGGGYLFGLPVGFVADSL 92

Query: 95  AKVLGASLSFWIGRLLFKNSSSAMEWAQRNKYFHLLSRGVEQDGWKFVLLARFSPI-PSY 154
              LGA+ +F +GR + K  S      +    F  +S  +++ G+K VLL R  PI P  
Sbjct: 93  GATLGATAAFLLGRTIGK--SYVTSKIKHYPKFQAVSVAIQKSGFKIVLLLRVVPILPFN 152

Query: 155 VINYALAATKVGFFLDFLLPTVIGCMPMILQNTSIGSLAGAAVASASGSQKSQIWSYIFP 214
           ++NY L+ T V    +++L T +G MP+      +G+          G  +  ++ ++  
Sbjct: 153 MLNYLLSVTPVRLG-EYMLATWLGMMPITFALVYVGTTLKDLSDITHGWHEVSVFRWVIM 212

Query: 215 VLGIGSSILISL---RIKKYSSGLKMAESSSSVE 244
           ++G+  ++++ +   R+ K S    +AE+ + ++
Sbjct: 213 MVGVALAVILIICITRVAKSSLDKALAENGTELD 242

The following BLAST results are available for this feature:

BLAST of CmoCh14G010840 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh14G010840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F1R5	9.4e-139	100.00	uncharacterized protein LOC111441406 OS=Cucurbita moschata OX=3662 GN=LOC1114414...	[more]
A0A6J1J5V4	1.3e-132	96.54	uncharacterized protein LOC111481545 OS=Cucurbita maxima OX=3661 GN=LOC111481545...	[more]
A0A0A0LFP4	6.7e-129	92.69	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G845510 PE=4 SV=1	[more]
A0A6J1DDR9	2.6e-128	91.92	uncharacterized protein LOC111020123 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A1S3CN62	2.2e-127	92.31	uncharacterized protein LOC103502831 OS=Cucumis melo OX=3656 GN=LOC103502831 PE=...	[more]

BLAST of CmoCh14G010840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G44960.1	8.0e-90	68.75	SNARE associated Golgi protein family	[more]
AT1G22850.1	2.3e-04	24.21	SNARE associated Golgi protein family	[more]
AT1G03260.1	2.3e-04	23.36	SNARE associated Golgi protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032816	SNARE associated Golgi protein	PFAM	PF09335	SNARE_assoc	coord: 68..189 e-value: 3.0E-21 score: 76.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 236..260
None	No IPR available	PANTHER	PTHR47699	SNARE ASSOCIATED GOLGI PROTEIN FAMILY	coord: 6..254

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh14G010840.1	CmoCh14G010840.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane