CmoCh14G009500 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh14G009500
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	BEST Arabidopsis thaliana protein match is: 3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein .
Location	Cmo_Chr14: 5059377 .. 5062922 (+)
RNA-Seq Expression	CmoCh14G009500
Synteny	CmoCh14G009500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCGTTGAATCGAACTCCGGGCCGCCGCCGCCGCCGCCATCGTCGTCGTCGTCTTCTACGCCATCTCCAAGCGGGAAGAGGGCTAGAGATCCCGACGATGAAGTTTATCTCGACAATTTTCACTCTCACAAGCGCTACCTAAGTGAGGTACCCCTTGTGTGCCCTTAATTTATTGTTAGGGCATCTGAAACTTCTTTGCCTTTACACATTTTGTTTTGATCCAGAAAAGCTATCGGTTTGTAGGTTGAACTTGAAATTTCAGCGTTTAGGGTATGAGTCTTTGTGGCATTTCTTAATTTGGGTCGATTATGCTCTTTCAGTTTTGCGTCATTCCTGTGTCTGCCTTTCTGGGTGCAAAATTCCCTCCTAACGTATATCCCTTCGTTGTTAATGATCTTGCACAGATAATGGCTTCTAGTTTGAATGGATTGACGGTTGGGGACCCTCTTTCAGAGAATCTCATGGATTCCCCTGCTAGGTCAGAGTCCATGCTTTATCTAAGGTAATGGAATTTGTTCCAATAAAGTTTAACTGATTTACTTTTAGATTGTCTTGTATACGAACGAGAATTTTAATACATAGAAGTTTACAAGCTCTTGTGCTGTATAAGATTATAGAAACAAATGGATGTTACTGGAAGAAATTGAAATTCTCCATTGTAACAAATCTTGTACTTTTGAAATGCGTCTGAAATGCCATTATGGGTCGAGATTTCTGAAACAAAACTCTCTTGATTCCTTTACTTAGTATTCTCAAGATGTAGTTTTCCTAAAAAAAAACTATGAATTTCCTTTACACTGCAAATAAAAAGTTACCGAGTTTATCCAGAAAGTTCGAATCTGACATTGAATTTCAAAATGTAATTGGCTCAACAAAACGCACAGTTCCAAACTTCGAAGTACCCTTCCTGGATTCTTTTAGGTAGAGGGTATCCTATCTACTTTACATGCCTATTGAAGAAGCTTATCGTCGTTACCTATTGATGCTTGTGCTGTTATAACCAGGCAGTAATGATGCACTTGATGGTGTATTCTAGGACAGCGAATTTTCATGGTTTTAATATGTGAGGTGTATGTGCTTCACTTCAGGAAAAAGTTCGATAAATGTTGTTTCATGTACCATCTTGGTTTGAACGGAGGAGTAGTTAGTATTCTTTGTTAAAATCTGATGGCTGAAAGATGAATAATGTCCACGAGGATGGTTTTCCCTGTTCTTATCTTCTGCCCCATCTTGGAGATTTAAAAATCTTGTCTGATTATTGTTATTTTTTCCTAGAATTGATCATTCATCCTTCTCTCTTAAGTTTGGCTTTGTGCATATTGTATGTGGTAAAGTACATCCAAAGCCTTGGTATGCATGTTAAAATTTTCTTCCATTAGTTACATTATAAGAAGAATCTCTCTAGTACGTGCGTACCACAACTTGCGTTCATGAGACTTCCAATTTCTTTTTTTCTTAATGTGCTTTTAAGATTTAACGAGGATATAGATGTATCATTTTGAATTTTCATTATGATCTTTCTGCTCCGTAGATTAAACTATACTTTAATTCAACATTGTGGGACTGATGATTTAGACAACCCACCTTTAGAACAAATGTGCAATGCCTTAACAAGTTGAAATCTGCTTAAATCGACACAGAGTCAACTTTATGTTGTTGAAAGTATGTTAGTTCAGGAGACTTGATTGAAATTTAAGGTCAGGAGACTTCTGTATTCCTTCTAGTTGTGCAACAAATGGTAGTCTTATTTTCTACGGACAATGTTTTATTTCAAAACTCGAGAGTTCATTGCTATTGATATTCATTCGTATAAATAGTAGTTTATTTTATTTATTTATTTATTTTTATTTTTAAACGGTAGTTGGGAAGTGTAACGGAAGAAACTATGATGAACTGGATTAAAACATTATTATCTGAAATTGTGATCTATCTTTAAAGTTCGTTAAGTTTTCTAGATCACAAAAGACATGCATATCTCTTCTTCTCATCTGTGTTCCACTGTCTAAACTAGTAGCAAAGAGATGCAGTATTCACCTATTCCAACTCTTCTGCAATCTTAGAGCCTCTTACTGCAACCCTTATTCTTTGGTTTAATACTTTTTCCCTCATTGTATGTTTATTCCTTCCAGTTTGGCCAAATCGCATGCATCTCGACTAATTCTAATTATGTAGAAAATCAATTTCCCACTGCCACCTAGAGCCATGTATTACATTTTGGGTCAGTATTTCGTTTAATATTGTATGATCCTAAATGATGGTTTTGGGATTTTCCGATTTTAATCTTTTTTCTTTTTTCTCTAACACTACATCTCAGGGATGAAATGTCCTGCCAATATTCTCCTATGTCGGAAGATTCAGATGACTGCCGGTTTTGTGAGACATCCACAAACTTATTTCCCTCGCAGTCTGATAGTAGTGTACCTACCAGTCCAGTCTCTCCATACCGATATCAGAGGCCATTCAGTGGGATGACTCCTTCAACAGGTACCAATACTTCACTTGGATGTAATACTGGTCCTGTCACTAGCTTGCAGCCCCATCAACGCGGATCAGATTCTGAGGGTCGTTTCCCTTCGTCTCCTAGTGATATATGTCACTCAGCAGATCTGAGAAGGGCTGCGCTCCTGCGCTCAGTGCAAATGAGAGCACAGCCTCATGGCCCATCATCTATGGAGTTGCCATATTGCTCCATGCCTGAACCTGGACCTAACATAGAAGCCGAAGAGCGGTCATGTTCTTTCATAAAATCGTTGGTTGATGAAAGAGTTTATCAACTTGGGGAATGCTCCTCAATGGGAGTGTCCGAACCTGAATATAATGAACAGAAATCTTGCAAGGACTTGAACAGGGAAATGAAAGACAGTGAGTCTGGAGGGTAGTTGTAAATGCTCAGCAGAGGAAAAATCTCTTCTAACGTAACACATGGGACACATTGCTGCTGTGGAACTGTGAAGTGTTTGTTTTTTGGTTCAACCTCCATGGAAATTCTCTTTTTGCATATGCTGCAAAATTGCTTTTGCTTGATTGAGTATGGTTTGGTCTTCTTCTAGGTCCTTTCCCGAGTGTGTGGTGCCTTGTGTGCTGTGTTCATTGTCGAGCGAGCTATTCTTATGAAGCCCGAGTCGAGTCGAGAAGAGATGTTCATTGTCAAGCTTGTGTGATCAACTCTGTCTATTTGATTCCTACTCGAGCTCGAGTCGAGAGAAGATGTTTCTCGGAGCTAATTTTCTAGATAAAATGCTGCTGCGGCTTTAGAGGTCACAAGATTGAAGCTGCCAGTGTCCCATTTGTTCCGTATTTATAACGCTGCTATTATTGAATTTTTGTTCTAATTGCCTTCTGAACTTACAGGCAAAATTGATCGGAAAATCAAAAGATGAATAGAGATATGATATTATATGTAGAGTTTCATCACCTGGGTCATAAACACGGCTGTATTGATGGGGACTTATTGGGCCGTTTCTTCCAAAGAGAAAGCCCAGCCGTATTAAAAGCCCATATGGATGGGCTTAAATAATTAAGAAAAAGGCAATCCACGGAGGC

mRNA sequence

ATGGGCGTTGAATCGAACTCCGGGCCGCCGCCGCCGCCGCCATCGTCGTCGTCGTCTTCTACGCCATCTCCAAGCGGGAAGAGGGCTAGAGATCCCGACGATGAAGTTTATCTCGACAATTTTCACTCTCACAAGCGCTACCTAAGGCATCTGAAACTTCTTTGCCTTTACACATTTTGTTTTGATCCAGAAAAGCTATCGTTTTGCGTCATTCCTGTGTCTGCCTTTCTGGGTGCAAAATTCCCTCCTAACGTATATCCCTTCGTTGTTAATGATCTTGCACAGATAATGGCTTCTAGTTTGAATGGATTGACGGTTGGGGACCCTCTTTCAGAGAATCTCATGGATTCCCCTGCTAGGTCAGAGTCCATGCTTTATCTAAGGGATGAAATGTCCTGCCAATATTCTCCTATGTCGGAAGATTCAGATGACTGCCGGTTTTGTGAGACATCCACAAACTTATTTCCCTCGCAGTCTGATAGTAGTGTACCTACCAGTCCAGTCTCTCCATACCGATATCAGAGGCCATTCAGTGGGATGACTCCTTCAACAGGTACCAATACTTCACTTGGATGTAATACTGGTCCTGTCACTAGCTTGCAGCCCCATCAACGCGGATCAGATTCTGAGGGTCGTTTCCCTTCGTCTCCTAGTGATATATGTCACTCAGCAGATCTGAGAAGGGCTGCGCTCCTGCGCTCAGTGCAAATGAGAGCACAGCCTCATGGCCCATCATCTATGGAGTTGCCATATTGCTCCATGCCTGAACCTGGACCTAACATAGAAGCCGAAGAGCGGTCATGTTCTTTCATAAAATCGTTGGTTGATGAAAGAGTTTATCAACTTGGGGAATGCTCCTCAATGGGAGTGTCCGAACCTGAATATAATGAACAGAAATCTTGCAAGGACTTGAACAGGGAAATGAAAGACAGTGAGTCTGGAGGGTAGTTGTAAATGCTCAGCAGAGGAAAAATCTCTTCTAACGTAACACATGGGACACATTGCTGCTGTGGAACTGTGAAGTGTTTGTTTTTTGGTTCAACCTCCATGGAAATTCTCTTTTTGCATATGCTGCAAAATTGCTTTTGCTTGATTGAGTATGGTTTGGTCTTCTTCTAGGTCCTTTCCCGAGTGTGTGGTGCCTTGTGTGCTGTGTTCATTGTCGAGCGAGCTATTCTTATGAAGCCCGAGTCGAGTCGAGAAGAGATGTTCATTGTCAAGCTTGTGTGATCAACTCTGTCTATTTGATTCCTACTCGAGCTCGAGTCGAGAGAAGATGTTTCTCGGAGCTAATTTTCTAGATAAAATGCTGCTGCGGCTTTAGAGGTCACAAGATTGAAGCTGCCAGTGTCCCATTTGTTCCGTATTTATAACGCTGCTATTATTGAATTTTTGTTCTAATTGCCTTCTGAACTTACAGGCAAAATTGATCGGAAAATCAAAAGATGAATAGAGATATGATATTATATGTAGAGTTTCATCACCTGGGTCATAAACACGGCTGTATTGATGGGGACTTATTGGGCCGTTTCTTCCAAAGAGAAAGCCCAGCCGTATTAAAAGCCCATATGGATGGGCTTAAATAATTAAGAAAAAGGCAATCCACGGAGGC

Coding sequence (CDS)

ATGGGCGTTGAATCGAACTCCGGGCCGCCGCCGCCGCCGCCATCGTCGTCGTCGTCTTCTACGCCATCTCCAAGCGGGAAGAGGGCTAGAGATCCCGACGATGAAGTTTATCTCGACAATTTTCACTCTCACAAGCGCTACCTAAGGCATCTGAAACTTCTTTGCCTTTACACATTTTGTTTTGATCCAGAAAAGCTATCGTTTTGCGTCATTCCTGTGTCTGCCTTTCTGGGTGCAAAATTCCCTCCTAACGTATATCCCTTCGTTGTTAATGATCTTGCACAGATAATGGCTTCTAGTTTGAATGGATTGACGGTTGGGGACCCTCTTTCAGAGAATCTCATGGATTCCCCTGCTAGGTCAGAGTCCATGCTTTATCTAAGGGATGAAATGTCCTGCCAATATTCTCCTATGTCGGAAGATTCAGATGACTGCCGGTTTTGTGAGACATCCACAAACTTATTTCCCTCGCAGTCTGATAGTAGTGTACCTACCAGTCCAGTCTCTCCATACCGATATCAGAGGCCATTCAGTGGGATGACTCCTTCAACAGGTACCAATACTTCACTTGGATGTAATACTGGTCCTGTCACTAGCTTGCAGCCCCATCAACGCGGATCAGATTCTGAGGGTCGTTTCCCTTCGTCTCCTAGTGATATATGTCACTCAGCAGATCTGAGAAGGGCTGCGCTCCTGCGCTCAGTGCAAATGAGAGCACAGCCTCATGGCCCATCATCTATGGAGTTGCCATATTGCTCCATGCCTGAACCTGGACCTAACATAGAAGCCGAAGAGCGGTCATGTTCTTTCATAAAATCGTTGGTTGATGAAAGAGTTTATCAACTTGGGGAATGCTCCTCAATGGGAGTGTCCGAACCTGAATATAATGAACAGAAATCTTGCAAGGACTTGAACAGGGAAATGAAAGACAGTGAGTCTGGAGGGTAG

Protein sequence

MGVESNSGPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLRHLKLLCLYTFCFDPEKLSFCVIPVSAFLGAKFPPNVYPFVVNDLAQIMASSLNGLTVGDPLSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPVSPYRYQRPFSGMTPSTGTNTSLGCNTGPVTSLQPHQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGECSSMGVSEPEYNEQKSCKDLNREMKDSESGG

Homology

[Close]

BLAST of CmoCh14G009500 vs. ExPASy TrEMBL
Match: A0A6J1F722 (uncharacterized protein LOC111441454 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111441454 PE=4 SV=1)

HSP 1 Score: 510.4 bits (1313), Expect = 5.5e-141
Identity = 268/315 (85.08%), Postives = 270/315 (85.71%), Query Frame = 0


Query: 1   MGVESNSGPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLRHLKLLCLYTFC 60
           MGVESNSGPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRY             
Sbjct: 1   MGVESNSGPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRY------------- 60

Query: 61  FDPEKLSFCVIPVSAFLGAKFPPNVYPFVVNDLAQIMASSLNGLTVGDPLSENLMDSPAR 120
                                           L++IMASSLNGLTVGDPLSENLMDSPAR
Sbjct: 61  --------------------------------LSEIMASSLNGLTVGDPLSENLMDSPAR 120

Query: 121 SESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPVSPYRYQRPFSGM 180
           SESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPVSPYRYQRPFSGM
Sbjct: 121 SESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPVSPYRYQRPFSGM 180

Query: 181 TPSTGTNTSLGCNTGPVTSLQPHQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRAQ 240
           TPSTGTNTSLGCNTGPVTSLQPHQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRAQ
Sbjct: 181 TPSTGTNTSLGCNTGPVTSLQPHQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRAQ 240

Query: 241 PHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGECSSMGVSEPEYNEQKS 300
           PHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGECSSMGVSEPEYNEQKS
Sbjct: 241 PHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGECSSMGVSEPEYNEQKS 270

Query: 301 CKDLNREMKDSESGG 316
           CKDLNREMKDSESGG
Sbjct: 301 CKDLNREMKDSESGG 270

[Close]

BLAST of CmoCh14G009500 vs. ExPASy TrEMBL
Match: A0A6J1J464 (uncharacterized protein LOC111482488 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482488 PE=4 SV=1)

HSP 1 Score: 486.9 bits (1252), Expect = 6.5e-134
Identity = 258/315 (81.90%), Postives = 262/315 (83.17%), Query Frame = 0


Query: 1   MGVESNSGPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLRHLKLLCLYTFC 60
           MGVESNS PPPPP   SSSSTPSPSGKRARDPDDEVYLDNFHSHKRY             
Sbjct: 1   MGVESNSAPPPPP---SSSSTPSPSGKRARDPDDEVYLDNFHSHKRY------------- 60

Query: 61  FDPEKLSFCVIPVSAFLGAKFPPNVYPFVVNDLAQIMASSLNGLTVGDPLSENLMDSPAR 120
                                           L++IMASSLNGLTVGD LSENLMDSPAR
Sbjct: 61  --------------------------------LSEIMASSLNGLTVGDSLSENLMDSPAR 120

Query: 121 SESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPVSPYRYQRPFSGM 180
           SESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSD+SVPTSPVSPYRYQRPFSGM
Sbjct: 121 SESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDNSVPTSPVSPYRYQRPFSGM 180

Query: 181 TPSTGTNTSLGCNTGPVTSLQPHQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRAQ 240
           TPST TNTSLGCNT PVTSLQPHQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRAQ
Sbjct: 181 TPSTATNTSLGCNTSPVTSLQPHQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRAQ 240

Query: 241 PHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGECSSMGVSEPEYNEQKS 300
           PHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGECS+MGVSEPEYNEQKS
Sbjct: 241 PHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGECSAMGVSEPEYNEQKS 267

Query: 301 CKDLNREMKDSESGG 316
           CKDLNREMKD ESGG
Sbjct: 301 CKDLNREMKDGESGG 267

[Close]

BLAST of CmoCh14G009500 vs. ExPASy TrEMBL
Match: A0A5A7TRC2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001370 PE=4 SV=1)

HSP 1 Score: 457.6 bits (1176), Expect = 4.2e-125
Identity = 248/317 (78.23%), Postives = 257/317 (81.07%), Query Frame = 0


Query: 1   MGVESNSGPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLRHLKLLCLYTFC 60
           MGVESNS PPPPP  +SSSSTPSPSGKRARDP+DEVYLDNFHSHKRY             
Sbjct: 1   MGVESNSAPPPPP--TSSSSTPSPSGKRARDPEDEVYLDNFHSHKRY------------- 60

Query: 61  FDPEKLSFCVIPVSAFLGAKFPPNVYPFVVNDLAQIMASSLNGLTVGDPLSENLMDSPAR 120
                                           L++IMASSLNGLTVG+PLSENLMDSPAR
Sbjct: 61  --------------------------------LSEIMASSLNGLTVGEPLSENLMDSPAR 120

Query: 121 SESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPVSPYRYQRPFSGM 180
           SESMLY RDEMS QYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPVSPYRYQRPFSGM
Sbjct: 121 SESMLYQRDEMSWQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPVSPYRYQRPFSGM 180

Query: 181 TPSTGTNTSLGCNTGPVTSLQPHQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRAQ 240
            PS GTNTSLGC+T PVTSLQPHQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRAQ
Sbjct: 181 APSNGTNTSLGCSTSPVTSLQPHQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRAQ 240

Query: 241 PHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGECSSM--GVSEPEYNEQ 300
           P GPSSMELPYCSMPEPGPNIEAE+R CS IKSLVDERVYQL ECSSM  GVSE EYNEQ
Sbjct: 241 PAGPSSMELPYCSMPEPGPNIEAEDRPCSCIKSLVDERVYQLEECSSMGLGVSESEYNEQ 270

Query: 301 KSCKDLNREMKDSESGG 316
           KSCKDLNR+MKDS+SGG
Sbjct: 301 KSCKDLNRDMKDSQSGG 270

[Close]

BLAST of CmoCh14G009500 vs. ExPASy TrEMBL
Match: A0A1S3BXT2 (uncharacterized protein LOC103494744 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494744 PE=4 SV=1)

HSP 1 Score: 457.6 bits (1176), Expect = 4.2e-125
Identity = 248/317 (78.23%), Postives = 257/317 (81.07%), Query Frame = 0


Query: 1   MGVESNSGPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLRHLKLLCLYTFC 60
           MGVESNS PPPPP  +SSSSTPSPSGKRARDP+DEVYLDNFHSHKRY             
Sbjct: 1   MGVESNSAPPPPP--TSSSSTPSPSGKRARDPEDEVYLDNFHSHKRY------------- 60

Query: 61  FDPEKLSFCVIPVSAFLGAKFPPNVYPFVVNDLAQIMASSLNGLTVGDPLSENLMDSPAR 120
                                           L++IMASSLNGLTVG+PLSENLMDSPAR
Sbjct: 61  --------------------------------LSEIMASSLNGLTVGEPLSENLMDSPAR 120

Query: 121 SESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPVSPYRYQRPFSGM 180
           SESMLY RDEMS QYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPVSPYRYQRPFSGM
Sbjct: 121 SESMLYQRDEMSWQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPVSPYRYQRPFSGM 180

Query: 181 TPSTGTNTSLGCNTGPVTSLQPHQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRAQ 240
            PS GTNTSLGC+T PVTSLQPHQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRAQ
Sbjct: 181 APSNGTNTSLGCSTSPVTSLQPHQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRAQ 240

Query: 241 PHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGECSSM--GVSEPEYNEQ 300
           P GPSSMELPYCSMPEPGPNIEAE+R CS IKSLVDERVYQL ECSSM  GVSE EYNEQ
Sbjct: 241 PAGPSSMELPYCSMPEPGPNIEAEDRPCSCIKSLVDERVYQLEECSSMGLGVSESEYNEQ 270

Query: 301 KSCKDLNREMKDSESGG 316
           KSCKDLNR+MKDS+SGG
Sbjct: 301 KSCKDLNRDMKDSQSGG 270

[Close]

BLAST of CmoCh14G009500 vs. ExPASy TrEMBL
Match: A0A0A0KWN0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G003080 PE=4 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 6.1e-124
Identity = 249/318 (78.30%), Postives = 256/318 (80.50%), Query Frame = 0


Query: 1   MGVESNSGPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLRHLKLLCLYTFC 60
           MGVESNS PPPP   +SSSSTPSPSGKRARDPDDEVYLDNFHSHKRY             
Sbjct: 1   MGVESNSAPPPP---TSSSSTPSPSGKRARDPDDEVYLDNFHSHKRY------------- 60

Query: 61  FDPEKLSFCVIPVSAFLGAKFPPNVYPFVVNDLAQIMASSLNGLTVGDPLSENLMDSPAR 120
                                           L++IMASSLNGLTVGDPLSENLMDSPAR
Sbjct: 61  --------------------------------LSEIMASSLNGLTVGDPLSENLMDSPAR 120

Query: 121 SESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPVSPYRYQRPFSGM 180
           SESMLY RDEMS QYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPVSPYRYQRPFSG+
Sbjct: 121 SESMLYQRDEMSWQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPVSPYRYQRPFSGV 180

Query: 181 TPSTGTNTSLGCN-TGPVTSLQPHQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRA 240
            PSTGTNTSLGC+ T PVTSLQPHQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRA
Sbjct: 181 APSTGTNTSLGCSTTSPVTSLQPHQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRA 240

Query: 241 QPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGECSSM--GVSEPEYNE 300
           QP GPSSMELPYCSMPEPGPNIEAE+R CS IKSLVDERVYQL ECSSM  GVSE EYNE
Sbjct: 241 QPPGPSSMELPYCSMPEPGPNIEAEDRPCSCIKSLVDERVYQLEECSSMGLGVSESEYNE 270

Query: 301 QKSCKDLNREMKDSESGG 316
           QKSCKDLNR+MKDS SGG
Sbjct: 301 QKSCKDLNRDMKDSRSGG 270

[Close]

BLAST of CmoCh14G009500 vs. TAIR 10
Match: AT2G25920.1 (BEST Arabidopsis thaliana protein match is: 3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein (TAIR:AT2G25910.2); Has 131 Blast hits to 125 proteins in 54 species: Archae - 0; Bacteria - 50; Metazoa - 12; Fungi - 12; Plants - 41; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). )

HSP 1 Score: 204.1 bits (518), Expect = 1.6e-52
Identity = 144/310 (46.45%), Postives = 169/310 (54.52%), Query Frame = 0


Query: 11  PPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLRHLKLLCLYTFCFDPEKLSFCV 70
           PP P S S    SP GKR RDP+DEVYLDN  S KRY                       
Sbjct: 30  PPVPISVS----SPCGKRTRDPEDEVYLDNLRSQKRY----------------------- 89

Query: 71  IPVSAFLGAKFPPNVYPFVVNDLAQIMASSLNGLTVGDPLSENLMDSPARSESMLYLRDE 130
                                 L++IMA SLNGLTVGD L  N+++SPARSES LY RD+
Sbjct: 90  ----------------------LSEIMACSLNGLTVGDSLPVNMLESPARSESFLYHRDD 149

Query: 131 MSCQYSPMSEDSDDCRFCE--TSTNLFPSQSDSSVPTSPVSPYRYQRPFSGMTPSTGTNT 190
           +S QYSPMSEDSD+ RFCE  T+T    S    S PTSPVSPYRYQRP +       + T
Sbjct: 150 LSLQYSPMSEDSDEARFCEDPTATASTSSSQPESRPTSPVSPYRYQRPLTSTNSPQPSPT 209

Query: 191 ----------SLGCNTGPVTSLQPHQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMR 250
                     S+  N    T+ Q  QRGSD+EGRFPSSPSDICHS DLRR ALLRSVQMR
Sbjct: 210 ILHHSHTCPASMISNAATTTTPQSRQRGSDTEGRFPSSPSDICHSGDLRRTALLRSVQMR 269

Query: 251 AQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGECSSMGVSEPEYNEQ 309
            QP G SS   P         NI+ EER CS  KS+ ++R Y  GE   +  +E   ++ 
Sbjct: 270 TQPCGYSSSSGP--------SNIDGEERMCS--KSMEEDRGYNKGE--DIPYAEVS-SKS 277

The following BLAST results are available for this feature:

BLAST of CmoCh14G009500 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh14G009500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F722	5.5e-141	85.08	uncharacterized protein LOC111441454 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1J464	6.5e-134	81.90	uncharacterized protein LOC111482488 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A5A7TRC2	4.2e-125	78.23	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BXT2	4.2e-125	78.23	uncharacterized protein LOC103494744 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0KWN0	6.1e-124	78.30	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G003080 PE=4 SV=1	[more]

BLAST of CmoCh14G009500 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G25920.1	1.6e-52	46.45	BEST Arabidopsis thaliana protein match is: 3'-5' exonuclease domain-containing ...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 289..315
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 296..315
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 155..216
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 155..220
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..19
None	No IPR available	PANTHER	PTHR35717	OS05G0156200 PROTEIN	coord: 4..313
None	No IPR available	PANTHER	PTHR35717:SF1	OS05G0156200 PROTEIN	coord: 4..313

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh14G009500.1	CmoCh14G009500.1	mRNA