CmoCh14G008150 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh14G008150
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	transcription factor TCP12-like
Location	Cmo_Chr14: 4204911 .. 4206041 (+)
RNA-Seq Expression	CmoCh14G008150
Synteny	CmoCh14G008150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATCTTCAAGCTTCAATCTCAACCCTTTCCCTTGCTTTCCTCTTGCATTTCCTTCACTTCTCAACCCTGACCCTTCACCCAACAACCCTACTTTCAACTTCCATCAACCCCATCTAGATCCACTCTCATTTCTTCCTCCCTATTTCCCGATCGCCCACTTCTCGGCATCGGCAACGGGGAACAGTATCCAAGCTCTCGGCGACATCCCAAGTGCTCTTACGGTCGGGATGGGGACGGGGACGAGGACGGGGAAGAAGGATCGACATAGTAAGATTTATACGGCGCAGGGTTTACGGGATCGGAGAGTGAGATTATCCATCGATATAGCTCGAAAGTTCTTTGATTTGCAAGACATGTTAGGGTATGACAAAGCTAGCAAAACCCTAGAGTGGCTTTTTGGTAAATCTAGAAAAGCAATTAAAGAGCTTTCAAGGTCCAAGTATGGAAATGTTGAAGAAAAGGAGGAAGATAGTGAAAAAGTTGAGGTTTTTAATCTTCTTGCTAAAGAATCAAGAGCCAAGGCCCGAGCAAGAGCCAGGGAAGACGACAACGACAACGACAACGACAACGACAACGATAAAAAGTATTATGGTCATCGGATGAGCCGCGTCGAGGAAGTTTCAGATCATTGGAGTACTCAAACTTCAAATCTATCAATGGAGGAATACTCTTTCACGAACAAGAGAAGGATTTGTGCTACCAAGTTCATCGGTGACAACGACAACGACAATATGAAACCGTGTCGGGACGACGATGCCGAAGCCTCAAAAGGGTATTTACAAGAACACTCCATGATCAAGAGGAAATGGAAAGCTTCCTCCATTGATGGCATCCCAAGTTATCCTTTTTCCAAGTAATTTCAACCATCAAAGTCTTGAAATTTCTGCTTTTTTACCCAATAATTTCTGATTTTTCTATGTTTTTTTTTGCAGGATTTGAGAGTTTAATGAAAACCCTTTTGAGAAATTAAGGATAAAATGCAGCCAAGAACGTCAAAACATGGCCTTTTTTAGATCATATTATAATAATTAAAGACTGATGATGATGTTTTTTCCTGCTTTATTAAGGTTACTAGATCATGTTTGATTTCCGTCCTTAGTTTATCCGAATATATATTGTCTTTGTCT

mRNA sequence

ATGGCATCTTCAAGCTTCAATCTCAACCCTTTCCCTTGCTTTCCTCTTGCATTTCCTTCACTTCTCAACCCTGACCCTTCACCCAACAACCCTACTTTCAACTTCCATCAACCCCATCTAGATCCACTCTCATTTCTTCCTCCCTATTTCCCGATCGCCCACTTCTCGGCATCGGCAACGGGGAACAGTATCCAAGCTCTCGGCGACATCCCAAGTGCTCTTACGGTCGGGATGGGGACGGGGACGAGGACGGGGAAGAAGGATCGACATAGTAAGATTTATACGGCGCAGGGTTTACGGGATCGGAGAGTGAGATTATCCATCGATATAGCTCGAAAGTTCTTTGATTTGCAAGACATGTTAGGGTATGACAAAGCTAGCAAAACCCTAGAGTGGCTTTTTGGTAAATCTAGAAAAGCAATTAAAGAGCTTTCAAGGTCCAAGTATGGAAATGTTGAAGAAAAGGAGGAAGATAGTGAAAAAGTTGAGGTTTTTAATCTTCTTGCTAAAGAATCAAGAGCCAAGGCCCGAGCAAGAGCCAGGGAAGACGACAACGACAACGACAACGACAACGACAACGATAAAAAGTATTATGGTCATCGGATGAGCCGCGTCGAGGAAGTTTCAGATCATTGGAGTACTCAAACTTCAAATCTATCAATGGAGGAATACTCTTTCACGAACAAGAGAAGGATTTGTGCTACCAAGTTCATCGGTGACAACGACAACGACAATATGAAACCGTGTCGGGACGACGATGCCGAAGCCTCAAAAGGGTATTTACAAGAACACTCCATGATCAAGAGGAAATGGAAAGCTTCCTCCATTGATGGCATCCCAAGTTATCCTTTTTCCAAGATTTGAGAGTTTAATGAAAACCCTTTTGAGAAATTAAGGATAAAATGCAGCCAAGAACGTCAAAACATGGCCTTTTTTAGATCATATTATAATAATTAAAGACTGATGATGATGTTTTTTCCTGCTTTATTAAGGTTACTAGATCATGTTTGATTTCCGTCCTTAGTTTATCCGAATATATATTGTCTTTGTCT

Coding sequence (CDS)

ATGGCATCTTCAAGCTTCAATCTCAACCCTTTCCCTTGCTTTCCTCTTGCATTTCCTTCACTTCTCAACCCTGACCCTTCACCCAACAACCCTACTTTCAACTTCCATCAACCCCATCTAGATCCACTCTCATTTCTTCCTCCCTATTTCCCGATCGCCCACTTCTCGGCATCGGCAACGGGGAACAGTATCCAAGCTCTCGGCGACATCCCAAGTGCTCTTACGGTCGGGATGGGGACGGGGACGAGGACGGGGAAGAAGGATCGACATAGTAAGATTTATACGGCGCAGGGTTTACGGGATCGGAGAGTGAGATTATCCATCGATATAGCTCGAAAGTTCTTTGATTTGCAAGACATGTTAGGGTATGACAAAGCTAGCAAAACCCTAGAGTGGCTTTTTGGTAAATCTAGAAAAGCAATTAAAGAGCTTTCAAGGTCCAAGTATGGAAATGTTGAAGAAAAGGAGGAAGATAGTGAAAAAGTTGAGGTTTTTAATCTTCTTGCTAAAGAATCAAGAGCCAAGGCCCGAGCAAGAGCCAGGGAAGACGACAACGACAACGACAACGACAACGACAACGATAAAAAGTATTATGGTCATCGGATGAGCCGCGTCGAGGAAGTTTCAGATCATTGGAGTACTCAAACTTCAAATCTATCAATGGAGGAATACTCTTTCACGAACAAGAGAAGGATTTGTGCTACCAAGTTCATCGGTGACAACGACAACGACAATATGAAACCGTGTCGGGACGACGATGCCGAAGCCTCAAAAGGGTATTTACAAGAACACTCCATGATCAAGAGGAAATGGAAAGCTTCCTCCATTGATGGCATCCCAAGTTATCCTTTTTCCAAGATTTGA

Protein sequence

MASSSFNLNPFPCFPLAFPSLLNPDPSPNNPTFNFHQPHLDPLSFLPPYFPIAHFSASATGNSIQALGDIPSALTVGMGTGTRTGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFGKSRKAIKELSRSKYGNVEEKEEDSEKVEVFNLLAKESRAKARARAREDDNDNDNDNDNDKKYYGHRMSRVEEVSDHWSTQTSNLSMEEYSFTNKRRICATKFIGDNDNDNMKPCRDDDAEASKGYLQEHSMIKRKWKASSIDGIPSYPFSKI

Homology

[Close]

BLAST of CmoCh14G008150 vs. ExPASy Swiss-Prot
Match: Q9SBV6 (Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum linkianum OX=102601 GN=CYC PE=3 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 5.9e-22
Identity = 68/126 (53.97%), Postives = 77/126 (61.11%), Query Frame = 0


Query: 86  KKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFGKSRKAIKEL- 145
           KKDRHSKIYT+QG RDRRVRLSI IARKFFDLQ+MLG+DK SKTL+WL  KS+ AIKEL 
Sbjct: 79  KKDRHSKIYTSQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKTAIKELV 138

Query: 146 -SRSKYGNVEEKEEDSEKV---------------------------EVFNLLAKESRAKA 183
            S+S   N     +D E+V                           +     AKESRAKA
Sbjct: 139 QSKSTKSNSSSPCDDCEEVVSVDSENVTDHSKGKSLKANNKCKEAMDSHQAAAKESRAKA 198

[Close]

BLAST of CmoCh14G008150 vs. ExPASy Swiss-Prot
Match: O49250 (Transcription factor CYCLOIDEA OS=Antirrhinum majus OX=4151 GN=CYC PE=1 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 5.9e-22
Identity = 68/126 (53.97%), Postives = 77/126 (61.11%), Query Frame = 0


Query: 86  KKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFGKSRKAIKEL- 145
           KKDRHSKIYT+QG RDRRVRLSI IARKFFDLQ+MLG+DK SKTL+WL  KS+ AIKEL 
Sbjct: 87  KKDRHSKIYTSQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKTAIKELV 146

Query: 146 -SRSKYGNVEEKEEDSEKV---------------------------EVFNLLAKESRAKA 183
            S+S   N     +D E+V                           +     AKESRAKA
Sbjct: 147 QSKSTKSNSSSPCDDCEEVVSVDSENVTDHSKGKSLKANNKCKEAMDSHQAAAKESRAKA 206

[Close]

BLAST of CmoCh14G008150 vs. ExPASy Swiss-Prot
Match: Q9SBV9 (Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum cirrhigerum OX=102600 GN=CYC PE=3 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 7.6e-22
Identity = 67/126 (53.17%), Postives = 77/126 (61.11%), Query Frame = 0


Query: 86  KKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFGKSRKAIKEL- 145
           KKDRHSKIYT+QG RDRRVRLSI IARKFFDLQ+MLG+DK SKTL+WL  KS+ A+KEL 
Sbjct: 79  KKDRHSKIYTSQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKTAVKELV 138

Query: 146 -SRSKYGNVEEKEEDSEKV---------------------------EVFNLLAKESRAKA 183
            S+S   N     +D E+V                           +     AKESRAKA
Sbjct: 139 QSKSTKSNSSSPCDDCEEVVSVESENVTDHSKGKSLKANNKCKEAMDSHQAAAKESRAKA 198

[Close]

BLAST of CmoCh14G008150 vs. ExPASy Swiss-Prot
Match: Q9SNW8 (Transcription factor DICHOTOMA OS=Antirrhinum majus OX=4151 GN=DICH PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 2.5e-20
Identity = 67/130 (51.54%), Postives = 78/130 (60.00%), Query Frame = 0


Query: 84  TGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFGKSRKAIKE 143
           T KKDRHSKI   QG RDRRVRLSI IARKFFDLQ+MLG+DK SKTL+WL  KS++AIKE
Sbjct: 85  TPKKDRHSKINRPQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKEAIKE 144

Query: 144 L--SRSKYGNVEEKEEDSEKVEVFNL-----------------------------LAKES 183
           L  S+S   N+     + ++ EV +                              LAKES
Sbjct: 145 LVQSKSSKSNISNSPSECDQ-EVLSADLPYIGSSKGKAAVGLNSNKCKGGRDAVDLAKES 204

[Close]

BLAST of CmoCh14G008150 vs. ExPASy Swiss-Prot
Match: Q9FYG7 (Transcription factor TCP1 OS=Arabidopsis thaliana OX=3702 GN=TCP1 PE=1 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 7.2e-20
Identity = 77/172 (44.77%), Postives = 101/172 (58.72%), Query Frame = 0


Query: 86  KKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFGKSRKAIKELS 145
           KKDRHSKI TAQG+RDRRVRLSI IAR+FFDLQDMLG+DKASKTL+WL  KSRKAIKE+ 
Sbjct: 87  KKDRHSKIQTAQGIRDRRVRLSIGIARQFFDLQDMLGFDKASKTLDWLLKKSRKAIKEVV 146

Query: 146 RSK--------YGNV-------EEKEED--SEKVEVFNL---LAKE----SRAKARARAR 205
           ++K        +GN+       EEKEED   +K  V+ L     +E       KA  R +
Sbjct: 147 QAKNLNNDDEDFGNIGGDVEQEEEKEEDDNGDKSFVYGLSPGYGEEEVVCEATKAGIRKK 206

Query: 206 EDDNDNDNDNDNDKKYYGHRMSRVEEVSDHWSTQT-SNLSMEEYSFTNKRRI 233
           + +  N +      K  G    R +E+  + + +T S+++  E     KR I
Sbjct: 207 KSELRNISSKGLGAKARGKAKERTKEMMAYDNPETASDITQSEIMDPFKRSI 258

[Close]

BLAST of CmoCh14G008150 vs. ExPASy TrEMBL
Match: A0A6J1F827 (transcription factor TCP12-like OS=Cucurbita moschata OX=3662 GN=LOC111441718 PE=4 SV=1)

HSP 1 Score: 571.6 bits (1472), Expect = 1.8e-159
Identity = 287/287 (100.00%), Postives = 287/287 (100.00%), Query Frame = 0


Query: 1   MASSSFNLNPFPCFPLAFPSLLNPDPSPNNPTFNFHQPHLDPLSFLPPYFPIAHFSASAT 60
           MASSSFNLNPFPCFPLAFPSLLNPDPSPNNPTFNFHQPHLDPLSFLPPYFPIAHFSASAT
Sbjct: 1   MASSSFNLNPFPCFPLAFPSLLNPDPSPNNPTFNFHQPHLDPLSFLPPYFPIAHFSASAT 60

Query: 61  GNSIQALGDIPSALTVGMGTGTRTGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDM 120
           GNSIQALGDIPSALTVGMGTGTRTGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDM
Sbjct: 61  GNSIQALGDIPSALTVGMGTGTRTGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDM 120

Query: 121 LGYDKASKTLEWLFGKSRKAIKELSRSKYGNVEEKEEDSEKVEVFNLLAKESRAKARARA 180
           LGYDKASKTLEWLFGKSRKAIKELSRSKYGNVEEKEEDSEKVEVFNLLAKESRAKARARA
Sbjct: 121 LGYDKASKTLEWLFGKSRKAIKELSRSKYGNVEEKEEDSEKVEVFNLLAKESRAKARARA 180

Query: 181 REDDNDNDNDNDNDKKYYGHRMSRVEEVSDHWSTQTSNLSMEEYSFTNKRRICATKFIGD 240
           REDDNDNDNDNDNDKKYYGHRMSRVEEVSDHWSTQTSNLSMEEYSFTNKRRICATKFIGD
Sbjct: 181 REDDNDNDNDNDNDKKYYGHRMSRVEEVSDHWSTQTSNLSMEEYSFTNKRRICATKFIGD 240

Query: 241 NDNDNMKPCRDDDAEASKGYLQEHSMIKRKWKASSIDGIPSYPFSKI 288
           NDNDNMKPCRDDDAEASKGYLQEHSMIKRKWKASSIDGIPSYPFSKI
Sbjct: 241 NDNDNMKPCRDDDAEASKGYLQEHSMIKRKWKASSIDGIPSYPFSKI 287

[Close]

BLAST of CmoCh14G008150 vs. ExPASy TrEMBL
Match: A0A6J1IZ61 (transcription factor TCP12-like OS=Cucurbita maxima OX=3661 GN=LOC111481999 PE=4 SV=1)

HSP 1 Score: 537.0 bits (1382), Expect = 5.0e-149
Identity = 270/287 (94.08%), Postives = 279/287 (97.21%), Query Frame = 0


Query: 1   MASSSFNLNPFPCFPLAFPSLLNPDPSPNNPTFNFHQPHLDPLSFLPPYFPIAHFSASAT 60
           MASSSFNLNPFPCFPLAFPSLLN DPSPNNPTFNF+QPHLDPLSFLPPYFPIAHFSASAT
Sbjct: 1   MASSSFNLNPFPCFPLAFPSLLNHDPSPNNPTFNFNQPHLDPLSFLPPYFPIAHFSASAT 60

Query: 61  GNSIQALGDIPSALTVGMGTGTRTGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDM 120
           GNSIQALGDIPSALTVG GTGTR GKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDM
Sbjct: 61  GNSIQALGDIPSALTVGTGTGTRMGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDM 120

Query: 121 LGYDKASKTLEWLFGKSRKAIKELSRSKYGNVEEKEEDSEKVEVFNLLAKESRAKARARA 180
           LGYDKASKTLEWLFGKSRKAIKELSRSKYGNVE+KEEDSEKVEVFNLLAKESRAKARARA
Sbjct: 121 LGYDKASKTLEWLFGKSRKAIKELSRSKYGNVEDKEEDSEKVEVFNLLAKESRAKARARA 180

Query: 181 REDDNDNDNDNDNDKKYYGHRMSRVEEVSDHWSTQTSNLSMEEYSFTNKRRICATKFIGD 240
            +DD+DNDNDNDNDKKYYGH+MS VEEVSDHWST+TSNLSMEEYSF NKRRICA KFIG 
Sbjct: 181 TDDDDDNDNDNDNDKKYYGHQMSHVEEVSDHWSTETSNLSMEEYSFMNKRRICAIKFIGG 240

Query: 241 NDNDNMKPCRDDDAEASKGYLQEHSMIKRKWKASSIDGIPSYPFSKI 288
           +DN+NMKPCRDDDAEASKG+LQEHSMIKRKWKASSIDGIPSYPFSKI
Sbjct: 241 DDNENMKPCRDDDAEASKGHLQEHSMIKRKWKASSIDGIPSYPFSKI 287

[Close]

BLAST of CmoCh14G008150 vs. ExPASy TrEMBL
Match: A0A1S3CGD1 (transcription factor TCP1 OS=Cucumis melo OX=3656 GN=LOC103500163 PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 1.4e-74
Identity = 192/349 (55.01%), Postives = 214/349 (61.32%), Query Frame = 0


Query: 1   MASSSFNLNPFPCF-------------PLAFPSLLNPDPSPNN-PTFNF-HQPHLDPLSF 60
           M SSS+N NPFPCF             PL+ PSLLN DPS NN  T NF HQPH DPLSF
Sbjct: 1   MGSSSYNPNPFPCFPSSSSSTTNSYNLPLSIPSLLNFDPSSNNTSTVNFHHQPHQDPLSF 60

Query: 61  LPPYFPIAHFSA-----------SATGNSIQALGDIPSALTVGMGTGTRTGKKDRHSKIY 120
           L PYFPIAHFS            +  GN+IQALGD+      G GT T  GKKDRHSKIY
Sbjct: 61  LAPYFPIAHFSTLTPPETAVINFAVAGNNIQALGDMVVPSAPGAGT-TGMGKKDRHSKIY 120

Query: 121 TAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFGKSRKAIKELSRSK------ 180
           TAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLF KSRKAIKELSR+K      
Sbjct: 121 TAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFSKSRKAIKELSRTKNVGFHG 180

Query: 181 ----------YGNVEEKEED---------------------SEKVEVFNLLAKESRAKAR 240
                       +VEE+ +D                      EKVE+FNL+AKESRAKAR
Sbjct: 181 GAKKLSLAAASSDVEEEYDDDKGWELKMKSMLRIDEQEKVSKEKVEIFNLVAKESRAKAR 240

Query: 241 ARAREDDNDNDNDNDNDKKYYGHRMSRVEEVSDHW------STQTSNLSMEEYSFTNKRR 279
           ARARE     +    +D K YGH+    +EVSDHW      ST+TSNLSMEE SF NKR+
Sbjct: 241 ARARE--RTMEKKQVDDSKVYGHQKGGAQEVSDHWSKHLNHSTETSNLSMEESSFMNKRK 300

[Close]

BLAST of CmoCh14G008150 vs. ExPASy TrEMBL
Match: A0A5D3CPM9 (Transcription factor TCP1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold90G00100 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 8.9e-74
Identity = 190/349 (54.44%), Postives = 213/349 (61.03%), Query Frame = 0


Query: 1   MASSSFNLNPFPCF-------------PLAFPSLLNPDPSPNN-PTFNF-HQPHLDPLSF 60
           M SSS+N NPFPCF             PL+ PSLLN DPS NN  T NF HQPH DPLSF
Sbjct: 1   MGSSSYNPNPFPCFPSSSSSTTNSYNLPLSIPSLLNFDPSSNNTSTVNFHHQPHQDPLSF 60

Query: 61  LPPYFPIAHFSA-----------SATGNSIQALGDIPSALTVGMGTGTRTGKKDRHSKIY 120
           L PYFPIAHFS            +  GN+IQALGD+      G GT T  GKKDRH+KIY
Sbjct: 61  LAPYFPIAHFSTLTPPETAVINFAVAGNNIQALGDMVVPSAPGAGT-TGMGKKDRHTKIY 120

Query: 121 TAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFGKSRKAIKELSRSK------ 180
           TAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLF KSRKAIKELSR+K      
Sbjct: 121 TAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFSKSRKAIKELSRTKNVGFHG 180

Query: 181 ----------YGNVEEKEED---------------------SEKVEVFNLLAKESRAKAR 240
                       +VEE+ +D                      EKVE+FNL+AKESRAKAR
Sbjct: 181 GAKKLSLAAASSDVEEEYDDDKGWELKMKSMLRIDEQEKVSKEKVEIFNLVAKESRAKAR 240

Query: 241 ARAREDDNDNDNDNDNDKKYYGHRMSRVEEVSDHW------STQTSNLSMEEYSFTNKRR 279
            RARE     +    +D K YGH+    +EVSDHW      ST+TSNLSMEE SF NKR+
Sbjct: 241 TRARE--RTMEKKQVDDSKVYGHQKGGAQEVSDHWSKHLNHSTETSNLSMEESSFMNKRK 300

[Close]

BLAST of CmoCh14G008150 vs. ExPASy TrEMBL
Match: A0A6J1GAZ6 (transcription factor CYCLOIDEA-like OS=Cucurbita moschata OX=3662 GN=LOC111452512 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 4.2e-71
Identity = 167/277 (60.29%), Postives = 190/277 (68.59%), Query Frame = 0


Query: 1   MASSSFNLNPFPCF----------PLAFPSLLNPDPSPNNPTFNFHQPHLDPLSFLPPYF 60
           M SSS+NLNPFP F          PL+ PSLLN +PSP   TFNFHQPH DP+SFL PYF
Sbjct: 1   MGSSSYNLNPFPYFPSSSTASYNLPLSIPSLLNSEPSPT--TFNFHQPHQDPVSFLAPYF 60

Query: 61  PIAHFSASAT----------GNSIQALGDIPSALTVGMGTGTRTGKKDRHSKIYTAQGLR 120
           PI HFS S T          G+++QA G+IPSA    MG    TGKKDRHSKIYTAQGLR
Sbjct: 61  PIGHFSTSTTPEAVINFAVAGSNVQAFGNIPSAPGARMG----TGKKDRHSKIYTAQGLR 120

Query: 121 DRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFGKSRKAIKELSRSKYGN--------- 180
           DRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLF KS+KAIKELSR+KYGN         
Sbjct: 121 DRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFSKSKKAIKELSRTKYGNFEVVGGARR 180

Query: 181 ------VEEKEEDSEKVEVFNLLAKESRAKARARAREDDNDNDNDNDNDKKYYGHRMSRV 240
                 VEE+EE + KVEVFNLLAK+SRAKA+ + R DD + D+D+DND K   H     
Sbjct: 181 MSLASDVEEEEEMTNKVEVFNLLAKQSRAKAKEKKRVDDENGDDDDDNDGKIDVH----- 240

Query: 241 EEVSDHWSTQTSNLSMEEYSFTNKRRICATKFIGDND 243
                    +TSNLSMEE SF NKR++ A KFI D++
Sbjct: 241 -------GGETSNLSMEESSFMNKRKLYAKKFIEDDE 259

[Close]

BLAST of CmoCh14G008150 vs. TAIR 10
Match: AT1G67260.1 (TCP family transcription factor )

HSP 1 Score: 99.4 bits (246), Expect = 5.1e-21
Identity = 77/172 (44.77%), Postives = 101/172 (58.72%), Query Frame = 0


Query: 86  KKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFGKSRKAIKELS 145
           KKDRHSKI TAQG+RDRRVRLSI IAR+FFDLQDMLG+DKASKTL+WL  KSRKAIKE+ 
Sbjct: 87  KKDRHSKIQTAQGIRDRRVRLSIGIARQFFDLQDMLGFDKASKTLDWLLKKSRKAIKEVV 146

Query: 146 RSK--------YGNV-------EEKEED--SEKVEVFNL---LAKE----SRAKARARAR 205
           ++K        +GN+       EEKEED   +K  V+ L     +E       KA  R +
Sbjct: 147 QAKNLNNDDEDFGNIGGDVEQEEEKEEDDNGDKSFVYGLSPGYGEEEVVCEATKAGIRKK 206

Query: 206 EDDNDNDNDNDNDKKYYGHRMSRVEEVSDHWSTQT-SNLSMEEYSFTNKRRI 233
           + +  N +      K  G    R +E+  + + +T S+++  E     KR I
Sbjct: 207 KSELRNISSKGLGAKARGKAKERTKEMMAYDNPETASDITQSEIMDPFKRSI 258

[Close]

BLAST of CmoCh14G008150 vs. TAIR 10
Match: AT1G67260.2 (TCP family transcription factor )

HSP 1 Score: 99.4 bits (246), Expect = 5.1e-21
Identity = 77/172 (44.77%), Postives = 101/172 (58.72%), Query Frame = 0


Query: 86  KKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFGKSRKAIKELS 145
           KKDRHSKI TAQG+RDRRVRLSI IAR+FFDLQDMLG+DKASKTL+WL  KSRKAIKE+ 
Sbjct: 87  KKDRHSKIQTAQGIRDRRVRLSIGIARQFFDLQDMLGFDKASKTLDWLLKKSRKAIKEVV 146

Query: 146 RSK--------YGNV-------EEKEED--SEKVEVFNL---LAKE----SRAKARARAR 205
           ++K        +GN+       EEKEED   +K  V+ L     +E       KA  R +
Sbjct: 147 QAKNLNNDDEDFGNIGGDVEQEEEKEEDDNGDKSFVYGLSPGYGEEEVVCEATKAGIRKK 206

Query: 206 EDDNDNDNDNDNDKKYYGHRMSRVEEVSDHWSTQT-SNLSMEEYSFTNKRRI 233
           + +  N +      K  G    R +E+  + + +T S+++  E     KR I
Sbjct: 207 KSELRNISSKGLGAKARGKAKERTKEMMAYDNPETASDITQSEIMDPFKRSI 258

[Close]

BLAST of CmoCh14G008150 vs. TAIR 10
Match: AT1G68800.1 (TCP domain protein 12 )

HSP 1 Score: 97.4 bits (241), Expect = 1.9e-20
Identity = 78/205 (38.05%), Postives = 104/205 (50.73%), Query Frame = 0


Query: 86  KKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFGKSRKAIKEL- 145
           K+DRHSKI TAQG RDRR+RLS+ IARKFFDLQDMLG+DKASKT+EWLF KS+ +IK+L 
Sbjct: 112 KRDRHSKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLFSKSKTSIKQLK 171

Query: 146 ---------SRSKYGNVEEKEEDS----------EKVEVFNLLAKESRAKARARAREDD- 205
                     + ++  V+EKE+D            K    +   KESR +AR RARE   
Sbjct: 172 ERVAASEGGGKDEHLQVDEKEKDETLKLRVSKRRTKTMESSFKTKESRERARKRARERTM 231

Query: 206 --------------NDNDNDNDNDKKYYGHRMSRVEEVSDHWSTQTSNLSMEEYSFTNKR 256
                         +D   +    K   G ++   E     WS  T+++ M EY   +  
Sbjct: 232 AKMKMRLFETSETISDPHQETREIKITNGVQLLEKENKEQEWS-NTNDVHMVEYQMDSVS 291

[Close]

BLAST of CmoCh14G008150 vs. TAIR 10
Match: AT3G18550.1 (TCP family transcription factor )

HSP 1 Score: 79.3 bits (194), Expect = 5.4e-15
Identity = 41/88 (46.59%), Postives = 60/88 (68.18%), Query Frame = 0


Query: 58  SATGNSIQALGDIPSALTVGMGTGTRTGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDL 117
           S T N I+    I ++    M    +  + DRHSKI TA+G RDRR+RLS+D+A++ F L
Sbjct: 120 SETINLIEDSQRISTSQDPKMKKAKKPSRTDRHSKIKTAKGTRDRRMRLSLDVAKELFGL 179

Query: 118 QDMLGYDKASKTLEWLFGKSRKAIKELS 146
           QDMLG+DKASKT+EWL  +++  I +++
Sbjct: 180 QDMLGFDKASKTVEWLLTQAKPEIIKIA 207

[Close]

BLAST of CmoCh14G008150 vs. TAIR 10
Match: AT3G18550.2 (TCP family transcription factor )

HSP 1 Score: 79.3 bits (194), Expect = 5.4e-15
Identity = 41/88 (46.59%), Postives = 60/88 (68.18%), Query Frame = 0


Query: 58  SATGNSIQALGDIPSALTVGMGTGTRTGKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDL 117
           S T N I+    I ++    M    +  + DRHSKI TA+G RDRR+RLS+D+A++ F L
Sbjct: 120 SETINLIEDSQRISTSQDPKMKKAKKPSRTDRHSKIKTAKGTRDRRMRLSLDVAKELFGL 179

Query: 118 QDMLGYDKASKTLEWLFGKSRKAIKELS 146
           QDMLG+DKASKT+EWL  +++  I +++
Sbjct: 180 QDMLGFDKASKTVEWLLTQAKPEIIKIA 207

The following BLAST results are available for this feature:

BLAST of CmoCh14G008150 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SBV6	5.9e-22	53.97	Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum linkianum OX=102601 GN=...	[more]
O49250	5.9e-22	53.97	Transcription factor CYCLOIDEA OS=Antirrhinum majus OX=4151 GN=CYC PE=1 SV=1	[more]
Q9SBV9	7.6e-22	53.17	Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum cirrhigerum OX=102600 G...	[more]
Q9SNW8	2.5e-20	51.54	Transcription factor DICHOTOMA OS=Antirrhinum majus OX=4151 GN=DICH PE=2 SV=1	[more]
Q9FYG7	7.2e-20	44.77	Transcription factor TCP1 OS=Arabidopsis thaliana OX=3702 GN=TCP1 PE=1 SV=1	[more]

BLAST of CmoCh14G008150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F827	1.8e-159	100.00	transcription factor TCP12-like OS=Cucurbita moschata OX=3662 GN=LOC111441718 PE...	[more]
A0A6J1IZ61	5.0e-149	94.08	transcription factor TCP12-like OS=Cucurbita maxima OX=3661 GN=LOC111481999 PE=4...	[more]
A0A1S3CGD1	1.4e-74	55.01	transcription factor TCP1 OS=Cucumis melo OX=3656 GN=LOC103500163 PE=4 SV=1	[more]
A0A5D3CPM9	8.9e-74	54.44	Transcription factor TCP1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A6J1GAZ6	4.2e-71	60.29	transcription factor CYCLOIDEA-like OS=Cucurbita moschata OX=3662 GN=LOC11145251...	[more]

BLAST of CmoCh14G008150 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67260.1	5.1e-21	44.77	TCP family transcription factor	[more]
AT1G67260.2	5.1e-21	44.77	TCP family transcription factor	[more]
AT1G68800.1	1.9e-20	38.05	TCP domain protein 12	[more]
AT3G18550.1	5.4e-15	46.59	TCP family transcription factor	[more]
AT3G18550.2	5.4e-15	46.59	TCP family transcription factor	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017887	Transcription factor TCP subgroup	PFAM	PF03634	TCP	coord: 84..149 e-value: 1.5E-34 score: 119.8
IPR017887	Transcription factor TCP subgroup	PROSITE	PS51369	TCP	coord: 86..144 score: 35.21637
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..197
None	No IPR available	PANTHER	PTHR31072:SF87	TRANSCRIPTION FACTOR TCP1	coord: 82..160
None	No IPR available	PANTHER	PTHR31072:SF87	TRANSCRIPTION FACTOR TCP1	coord: 153..275
IPR005333	Transcription factor, TCP	PANTHER	PTHR31072	TRANSCRIPTION FACTOR TCP4-RELATED	coord: 153..275
IPR005333	Transcription factor, TCP	PANTHER	PTHR31072	TRANSCRIPTION FACTOR TCP4-RELATED	coord: 82..160
IPR017888	CYC/TB1, R domain	PROSITE	PS51370	R	coord: 170..195 score: 8.935834

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh14G008150.1	CmoCh14G008150.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003700	DNA-binding transcription factor activity