CmoCh14G006840 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh14G006840
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	LOB domain-containing protein
Location	Cmo_Chr14: 3497304 .. 3497837 (-)
RNA-Seq Expression	CmoCh14G006840
Synteny	CmoCh14G006840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTCTTCCACCTATTCCAACTCCCCTTGTGCAGCCTGCAAGTTCCTCCGCCGAAAATGCCTACCCGATTGCGTTTTCGCGCCCTATTTCCCGCCGGAGGAGCCCCAAAAGTTCGCCAACGTTCACAAGATCTTCGGTGCCAGCAATGTCAGCAAACTGCTGAACGAAGTCCAGCCACACCAGCGGGACGACGCCGTGAACTCGCTCGCCTACGAGGCCGAGGCGAGGATGAAAGACCCCGTCTACGGCTGCGTTGGCGCCATCTCCATACTCCAAAGGCAAGTCATCAAGCTCCAAAAAGAGCTCGACGCTACCAACGCCAATCTCATTCGCTACGCCTGCACCGAAATCCCCGCCCCATCTCCGTCCTCGTCCTCGCAATACGCTCGAAGGTCGTCGTCGACCAGCCACGACGGAAGCTCATCGACCTCTAGCTATGGCCACTACTATTCCAATCCCTACTTTTCTCCATGGAGTAACAGCCATAATGGCTCTTGTGGAGATGGCCATGACAAGGCAGAGTTCAAGTAA

mRNA sequence

ATGTCTTCTTCCACCTATTCCAACTCCCCTTGTGCAGCCTGCAAGTTCCTCCGCCGAAAATGCCTACCCGATTGCGTTTTCGCGCCCTATTTCCCGCCGGAGGAGCCCCAAAAGTTCGCCAACGTTCACAAGATCTTCGGTGCCAGCAATGTCAGCAAACTGCTGAACGAAGTCCAGCCACACCAGCGGGACGACGCCGTGAACTCGCTCGCCTACGAGGCCGAGGCGAGGATGAAAGACCCCGTCTACGGCTGCGTTGGCGCCATCTCCATACTCCAAAGGCAAGTCATCAAGCTCCAAAAAGAGCTCGACGCTACCAACGCCAATCTCATTCGCTACGCCTGCACCGAAATCCCCGCCCCATCTCCGTCCTCGTCCTCGCAATACGCTCGAAGGTCGTCGTCGACCAGCCACGACGGAAGCTCATCGACCTCTAGCTATGGCCACTACTATTCCAATCCCTACTTTTCTCCATGGAGTAACAGCCATAATGGCTCTTGTGGAGATGGCCATGACAAGGCAGAGTTCAAGTAA

Coding sequence (CDS)

ATGTCTTCTTCCACCTATTCCAACTCCCCTTGTGCAGCCTGCAAGTTCCTCCGCCGAAAATGCCTACCCGATTGCGTTTTCGCGCCCTATTTCCCGCCGGAGGAGCCCCAAAAGTTCGCCAACGTTCACAAGATCTTCGGTGCCAGCAATGTCAGCAAACTGCTGAACGAAGTCCAGCCACACCAGCGGGACGACGCCGTGAACTCGCTCGCCTACGAGGCCGAGGCGAGGATGAAAGACCCCGTCTACGGCTGCGTTGGCGCCATCTCCATACTCCAAAGGCAAGTCATCAAGCTCCAAAAAGAGCTCGACGCTACCAACGCCAATCTCATTCGCTACGCCTGCACCGAAATCCCCGCCCCATCTCCGTCCTCGTCCTCGCAATACGCTCGAAGGTCGTCGTCGACCAGCCACGACGGAAGCTCATCGACCTCTAGCTATGGCCACTACTATTCCAATCCCTACTTTTCTCCATGGAGTAACAGCCATAATGGCTCTTGTGGAGATGGCCATGACAAGGCAGAGTTCAAGTAA

Protein sequence

MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQRDDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYACTEIPAPSPSSSSQYARRSSSTSHDGSSSTSSYGHYYSNPYFSPWSNSHNGSCGDGHDKAEFK

Homology

[Close]

BLAST of CmoCh14G006840 vs. ExPASy Swiss-Prot
Match: Q8L8Q3 (LOB domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=LBD25 PE=2 SV=3)

HSP 1 Score: 201.1 bits (510), Expect = 1.1e-50
Identity = 92/111 (82.88%), Postives = 105/111 (94.59%), Query Frame = 0


Query: 4   STYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQR 63
           S Y+NSPCAACKFLRRKC  DCVFAPYFPPEEP KFANVH+IFGASNVSK+L+EV PHQR
Sbjct: 33  SNYTNSPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQR 92

Query: 64  DDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYA 115
           +DAVNSLAYEAEAR+KDPVYGCVGAIS+LQRQV++LQ+EL+ TNA+L+RYA
Sbjct: 93  EDAVNSLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADLMRYA 143

[Close]

BLAST of CmoCh14G006840 vs. ExPASy Swiss-Prot
Match: Q9FML4 (Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.2e-46
Identity = 107/183 (58.47%), Postives = 123/183 (67.21%), Query Frame = 0


Query: 2   SSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPH 61
           SSS   NSPCAACKFLRRKC+P C+FAPYFPPEEP KFANVHKIFGASNV+KLLNE+ PH
Sbjct: 3   SSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPH 62

Query: 62  QRDDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYACTEIPA- 121
           QR+DAVNSLAYEAEAR++DPVYGCVGAIS LQRQV +LQKELDA NA+L  Y  +   A 
Sbjct: 63  QREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTSAAG 122

Query: 122 -----------PSPSSSSQYARRSSSTSHDGSSSTSSY---GHYYSNPYFSPWSNSHNGS 170
                      P P  S Q    +      G+S   +    G   S   F PW+N H+  
Sbjct: 123 APGNVVDLVFQPQPLPSQQLPPLNPVYRLSGASPVMNQMPRGTGGSYGTFLPWNNGHDQQ 182

[Close]

BLAST of CmoCh14G006840 vs. ExPASy Swiss-Prot
Match: O04479 (Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 2.9e-40
Identity = 86/154 (55.84%), Postives = 114/154 (74.03%), Query Frame = 0


Query: 3   SSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQ 62
           +S+ +NSPCAACKFLRRKC P+CVFAPYFPP++PQKFANVHK+FGASNV+KLLNE+ P Q
Sbjct: 2   ASSSTNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQ 61

Query: 63  RDDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYACTEIPAPS 122
           R+DAVNSLAYEA+ R++DPVYGCVG IS+LQ Q+ +LQ +L    + L +Y    I A +
Sbjct: 62  REDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQSLGILAAT 121

Query: 123 PSSSSQYARRSSSTSHDGSSSTSSYGHYYSNPYF 157
             S        ++   DG ++T+   HY+ + +F
Sbjct: 122 HQSLGINLLAGAA---DG-TATAVRDHYHHHQFF 151

[Close]

BLAST of CmoCh14G006840 vs. ExPASy Swiss-Prot
Match: A2WXT0 (LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 PE=3 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.5e-39
Identity = 76/121 (62.81%), Postives = 96/121 (79.34%), Query Frame = 0


Query: 7   SNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQRDDA 66
           + SPCAACKFLRRKC PDCVFAPYFPP+ PQKF +VH++FGASNV+KLLNE+ P+QR+DA
Sbjct: 35  TGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQREDA 94

Query: 67  VNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYACTEIPAPSPSSS 126
           VNSLAYEA+ R++DPVYGCV  ISILQR + +LQ++L      L +Y      A + S+S
Sbjct: 95  VNSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKYQQAAAAAAAASAS 154

Query: 127 S 128
           +
Sbjct: 155 T 155

[Close]

BLAST of CmoCh14G006840 vs. ExPASy Swiss-Prot
Match: Q8LQH4 (LOB domain-containing protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=LBD6 PE=2 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.5e-39
Identity = 76/121 (62.81%), Postives = 96/121 (79.34%), Query Frame = 0


Query: 7   SNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQRDDA 66
           + SPCAACKFLRRKC PDCVFAPYFPP+ PQKF +VH++FGASNV+KLLNE+ P+QR+DA
Sbjct: 35  TGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQREDA 94

Query: 67  VNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYACTEIPAPSPSSS 126
           VNSLAYEA+ R++DPVYGCV  ISILQR + +LQ++L      L +Y      A + S+S
Sbjct: 95  VNSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKYQQAAAAAAAASAS 154

Query: 127 S 128
           +
Sbjct: 155 T 155

[Close]

BLAST of CmoCh14G006840 vs. ExPASy TrEMBL
Match: A0A6J1FAW3 (LOB domain-containing protein 25-like OS=Cucurbita moschata OX=3662 GN=LOC111442374 PE=3 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 4.3e-95
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60
           MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 1   MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60

Query: 61  HQRDDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYACTEIPA 120
           HQRDDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYACTEIPA
Sbjct: 61  HQRDDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYACTEIPA 120

Query: 121 PSPSSSSQYARRSSSTSHDGSSSTSSYGHYYSNPYFSPWSNSHNGSCGDGHDKAEFK 178
           PSPSSSSQYARRSSSTSHDGSSSTSSYGHYYSNPYFSPWSNSHNGSCGDGHDKAEFK
Sbjct: 121 PSPSSSSQYARRSSSTSHDGSSSTSSYGHYYSNPYFSPWSNSHNGSCGDGHDKAEFK 177

[Close]

BLAST of CmoCh14G006840 vs. ExPASy TrEMBL
Match: A0A6J1J7N2 (LOB domain-containing protein 25-like OS=Cucurbita maxima OX=3661 GN=LOC111482099 PE=3 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 3.7e-94
Identity = 176/177 (99.44%), Postives = 176/177 (99.44%), Query Frame = 0


Query: 1   MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60
           MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 1   MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60

Query: 61  HQRDDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYACTEIPA 120
           HQRDDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYACTEIPA
Sbjct: 61  HQRDDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYACTEIPA 120

Query: 121 PSPSSSSQYARRSSSTSHDGSSSTSSYGHYYSNPYFSPWSNSHNGSCGDGHDKAEFK 178
           PS SSSSQYARRSSSTSHDGSSSTSSYGHYYSNPYFSPWSNSHNGSCGDGHDKAEFK
Sbjct: 121 PSQSSSSQYARRSSSTSHDGSSSTSSYGHYYSNPYFSPWSNSHNGSCGDGHDKAEFK 177

[Close]

BLAST of CmoCh14G006840 vs. ExPASy TrEMBL
Match: A0A0A0LI15 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G839790 PE=3 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 2.3e-88
Identity = 165/177 (93.22%), Postives = 173/177 (97.74%), Query Frame = 0


Query: 1   MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60
           MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 30  MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 89

Query: 61  HQRDDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYACTEIPA 120
           HQR+DAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNA+LIRYAC+EIPA
Sbjct: 90  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEIPA 149

Query: 121 PSPSSSSQYARRSSSTSHDGSSSTSSYGHYYSNPYFSPWSNSHNGSCGDGHDKAEFK 178
           PSPSSSSQYARRSSSTSH+GSSSTSSYGHYY+  YFSPWSN++NG CGDGHDK E+K
Sbjct: 150 PSPSSSSQYARRSSSTSHEGSSSTSSYGHYYTGLYFSPWSNNNNGPCGDGHDKGEYK 206

[Close]

BLAST of CmoCh14G006840 vs. ExPASy TrEMBL
Match: A0A5D3BPW0 (LOB domain-containing protein 25-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1545G00030 PE=3 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 5.1e-88
Identity = 164/177 (92.66%), Postives = 173/177 (97.74%), Query Frame = 0


Query: 1   MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60
           MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 1   MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60

Query: 61  HQRDDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYACTEIPA 120
           HQR+DAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNA+LIRYAC+E+PA
Sbjct: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEMPA 120

Query: 121 PSPSSSSQYARRSSSTSHDGSSSTSSYGHYYSNPYFSPWSNSHNGSCGDGHDKAEFK 178
           PSPSSSSQYARRSSSTSH+GSSSTSSYGHYY+  YFSPWSN++NG CGDGHDK E+K
Sbjct: 121 PSPSSSSQYARRSSSTSHEGSSSTSSYGHYYTGLYFSPWSNNNNGPCGDGHDKGEYK 177

[Close]

BLAST of CmoCh14G006840 vs. ExPASy TrEMBL
Match: A0A1S3B938 (LOB domain-containing protein 25-like OS=Cucumis melo OX=3656 GN=LOC103487119 PE=3 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 5.1e-88
Identity = 164/177 (92.66%), Postives = 173/177 (97.74%), Query Frame = 0


Query: 1   MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60
           MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 1   MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60

Query: 61  HQRDDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYACTEIPA 120
           HQR+DAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNA+LIRYAC+E+PA
Sbjct: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEMPA 120

Query: 121 PSPSSSSQYARRSSSTSHDGSSSTSSYGHYYSNPYFSPWSNSHNGSCGDGHDKAEFK 178
           PSPSSSSQYARRSSSTSH+GSSSTSSYGHYY+  YFSPWSN++NG CGDGHDK E+K
Sbjct: 121 PSPSSSSQYARRSSSTSHEGSSSTSSYGHYYTGLYFSPWSNNNNGPCGDGHDKGEYK 177

[Close]

BLAST of CmoCh14G006840 vs. TAIR 10
Match: AT3G27650.1 (LOB domain-containing protein 25 )

HSP 1 Score: 201.1 bits (510), Expect = 7.7e-52
Identity = 92/111 (82.88%), Postives = 105/111 (94.59%), Query Frame = 0


Query: 4   STYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQR 63
           S Y+NSPCAACKFLRRKC  DCVFAPYFPPEEP KFANVH+IFGASNVSK+L+EV PHQR
Sbjct: 33  SNYTNSPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQR 92

Query: 64  DDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYA 115
           +DAVNSLAYEAEAR+KDPVYGCVGAIS+LQRQV++LQ+EL+ TNA+L+RYA
Sbjct: 93  EDAVNSLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADLMRYA 143

[Close]

BLAST of CmoCh14G006840 vs. TAIR 10
Match: AT5G63090.2 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 187.6 bits (475), Expect = 8.8e-48
Identity = 107/183 (58.47%), Postives = 123/183 (67.21%), Query Frame = 0


Query: 2   SSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPH 61
           SSS   NSPCAACKFLRRKC+P C+FAPYFPPEEP KFANVHKIFGASNV+KLLNE+ PH
Sbjct: 3   SSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPH 62

Query: 62  QRDDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYACTEIPA- 121
           QR+DAVNSLAYEAEAR++DPVYGCVGAIS LQRQV +LQKELDA NA+L  Y  +   A 
Sbjct: 63  QREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTSAAG 122

Query: 122 -----------PSPSSSSQYARRSSSTSHDGSSSTSSY---GHYYSNPYFSPWSNSHNGS 170
                      P P  S Q    +      G+S   +    G   S   F PW+N H+  
Sbjct: 123 APGNVVDLVFQPQPLPSQQLPPLNPVYRLSGASPVMNQMPRGTGGSYGTFLPWNNGHDQQ 182

[Close]

BLAST of CmoCh14G006840 vs. TAIR 10
Match: AT5G63090.3 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 187.6 bits (475), Expect = 8.8e-48
Identity = 107/183 (58.47%), Postives = 123/183 (67.21%), Query Frame = 0


Query: 2   SSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPH 61
           SSS   NSPCAACKFLRRKC+P C+FAPYFPPEEP KFANVHKIFGASNV+KLLNE+ PH
Sbjct: 3   SSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPH 62

Query: 62  QRDDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYACTEIPA- 121
           QR+DAVNSLAYEAEAR++DPVYGCVGAIS LQRQV +LQKELDA NA+L  Y  +   A 
Sbjct: 63  QREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTSAAG 122

Query: 122 -----------PSPSSSSQYARRSSSTSHDGSSSTSSY---GHYYSNPYFSPWSNSHNGS 170
                      P P  S Q    +      G+S   +    G   S   F PW+N H+  
Sbjct: 123 APGNVVDLVFQPQPLPSQQLPPLNPVYRLSGASPVMNQMPRGTGGSYGTFLPWNNGHDQQ 182

[Close]

BLAST of CmoCh14G006840 vs. TAIR 10
Match: AT5G63090.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 187.6 bits (475), Expect = 8.8e-48
Identity = 107/183 (58.47%), Postives = 123/183 (67.21%), Query Frame = 0


Query: 2   SSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPH 61
           SSS   NSPCAACKFLRRKC+P C+FAPYFPPEEP KFANVHKIFGASNV+KLLNE+ PH
Sbjct: 3   SSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPH 62

Query: 62  QRDDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYACTEIPA- 121
           QR+DAVNSLAYEAEAR++DPVYGCVGAIS LQRQV +LQKELDA NA+L  Y  +   A 
Sbjct: 63  QREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTSAAG 122

Query: 122 -----------PSPSSSSQYARRSSSTSHDGSSSTSSY---GHYYSNPYFSPWSNSHNGS 170
                      P P  S Q    +      G+S   +    G   S   F PW+N H+  
Sbjct: 123 APGNVVDLVFQPQPLPSQQLPPLNPVYRLSGASPVMNQMPRGTGGSYGTFLPWNNGHDQQ 182

[Close]

BLAST of CmoCh14G006840 vs. TAIR 10
Match: AT5G63090.4 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 187.6 bits (475), Expect = 8.8e-48
Identity = 107/183 (58.47%), Postives = 123/183 (67.21%), Query Frame = 0


Query: 2   SSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPH 61
           SSS   NSPCAACKFLRRKC+P C+FAPYFPPEEP KFANVHKIFGASNV+KLLNE+ PH
Sbjct: 3   SSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPH 62

Query: 62  QRDDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYACTEIPA- 121
           QR+DAVNSLAYEAEAR++DPVYGCVGAIS LQRQV +LQKELDA NA+L  Y  +   A 
Sbjct: 63  QREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTSAAG 122

Query: 122 -----------PSPSSSSQYARRSSSTSHDGSSSTSSY---GHYYSNPYFSPWSNSHNGS 170
                      P P  S Q    +      G+S   +    G   S   F PW+N H+  
Sbjct: 123 APGNVVDLVFQPQPLPSQQLPPLNPVYRLSGASPVMNQMPRGTGGSYGTFLPWNNGHDQQ 182

The following BLAST results are available for this feature:

BLAST of CmoCh14G006840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L8Q3	1.1e-50	82.88	LOB domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=LBD25 PE=2 S...	[more]
Q9FML4	1.2e-46	58.47	Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=...	[more]
O04479	2.9e-40	55.84	Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1	[more]
A2WXT0	2.5e-39	62.81	LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 P...	[more]
Q8LQH4	2.5e-39	62.81	LOB domain-containing protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=LBD6...	[more]

BLAST of CmoCh14G006840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FAW3	4.3e-95	100.00	LOB domain-containing protein 25-like OS=Cucurbita moschata OX=3662 GN=LOC111442...	[more]
A0A6J1J7N2	3.7e-94	99.44	LOB domain-containing protein 25-like OS=Cucurbita maxima OX=3661 GN=LOC11148209...	[more]
A0A0A0LI15	2.3e-88	93.22	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G839790 PE=3 SV...	[more]
A0A5D3BPW0	5.1e-88	92.66	LOB domain-containing protein 25-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3B938	5.1e-88	92.66	LOB domain-containing protein 25-like OS=Cucumis melo OX=3656 GN=LOC103487119 PE...	[more]

BLAST of CmoCh14G006840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G27650.1	7.7e-52	82.88	LOB domain-containing protein 25	[more]
AT5G63090.2	8.8e-48	58.47	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G63090.3	8.8e-48	58.47	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G63090.1	8.8e-48	58.47	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G63090.4	8.8e-48	58.47	Lateral organ boundaries (LOB) domain family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 89..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..146
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 158..177
None	No IPR available	PANTHER	PTHR31301:SF12	LOB DOMAIN-CONTAINING PROTEIN 25	coord: 1..165
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 1..165
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 10..106 e-value: 2.8E-42 score: 143.3
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 9..110 score: 27.44631

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh14G006840.1	CmoCh14G006840.1	mRNA