
CmoCh14G005800 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGTGCCAGCACGATGATGCTGCTGGCGTTGGTTCCGGCTGGAGGGCATATCGTGACGACCACAGATTGCTACAGGAAGACGAGAATTTTTATTGAGACCTTACTTCCCAAAATGGGAATCACGGTATTACAGTTTTGATCTTACTTTTCTTCTTTTTGGTGGTATAGTTAATTATTACGCTAATGCTAGTCTTCTTTAACATTTTTGTGCTCCTTCAATGATTTGGTGTTCAACTTGATCTCTCTCGTTCTGAAATACATAGCCTTTTCCCGCATGCATGCTTCAATTTTTTGGCAGAGTCAGAATAATTTTTGTTTTTGTTTGATGTAATAAGACGGACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCTTTGGGTTTCCCCAAAAGGCATCCCTCCAATGGAGAGTGTATTCTTAGATTATACACTCATGACCATTCCCTAAATTAACCAATGTGGGACACTTTCATCCAACACCTCCCCTCGAACAAAGTACGCCTCCCCTTAATCGAGGCTCGACTCCTTCTTTCTAGAGCCTTTTTCGACATCCGAGGATTTGCCAATTTATTGGCACGGCTAAGTTTAGGGCATGGCTCTAATACCATGTTAGATGAACACGACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAACTCTCATGGCTTTGCTTTGGGTTTCCCCAAAAGGCCTCACTCCAATGGAGAGTGTATTCTTAGATTATAAACTCATGACCATTCCCTAAATTACTCATGACCATTCCCTAAATTAACCAACGTGGGACACTTTCATCCAACAACACGACAACTTATTTTCTACTTGGCGTTATAAATATAAATATATAAAATAAAAAGATGGTAATCTGCCTTCACCAGATAAAATTGTGCTCAGGATTCAAACAAGTCAACTTTAGGCCCGAAAATTAGAGTAAGCAGCTTTGGCTCATTTGGGGAATTCTATCTGGTCTGGTGTCGTCCCCACTTGGCTACTTCTTTCCGCTAATCTTGAGGCCGGTTTGGGTTGACTTTTTTCTTAATGTGTTTGAACAAGTTTTTCAAATGCAATAAAAAAAAATAGTTTTTTTAAGTACCGAACAAGTATTCTTAAGCTCTTAGCAATTCATTCCAAATAGGTTCTTGATTTACGTTTTACTTCCATCATCCCTAAGTATTTTTGTTTTGGCATGAAAATAGAATTAATGAAGAATGAAAATATGAGCAAATGCCATTTCTTTAGATTTTTTTCTTTAATATTTAAAGAAATAGAATTATAGTTTCCATTTGATGTGTTAGATCCTGTTAACAATCTTCCTTCTCGTTTATTTTTACTGATTATAGAACATCTGAATTCTTTTATTGTTGATAATTTTTTCAATCAGATGGGGTTTGTTATCTTTAAAAAGAAAATTGGATGAATTTGTCTATAAGTTGGTGCTTCATGTTTTGTGCTAGAACTGGGTGGTAGGAAAGCTCTATTCTTTTAGCCAACTTTCTTTTTGATGTTGTGCTAGTTGTGTTTCTGAATTACTGTACAGATTTCAAAAGTTTTAAATAAATAAAATATAATGCAAAAATTAAATTTGAAAACAACATAAAGTTTTTTTTTTTAAAATCTTGTGGTAAAACCATCGGAGGTTGTAGAAATTGTTTATTTGTGCGTTCAAAATTTTGTGTTAATTGCTGACTTGGTAACTATAACTATAACTTGGAATGCAGGCTACCACCATTGATCCTGCAGATATGAACGCCCTAGAAGTAGCTCTGAAAGAGAATAATGTATGACCATGTTCCAAGCTTTTTTTTTTCTTTTAAAGGTTTTCGTGTTTGGACTTGGTGGAAATTGATGTTACCTTTATCTTCCTTCCGTGCAGGTTTCTCTTTTCTTCACTGAATCCCCAACTAATCCATTTCTGAGATGCGTTGACATTAAACTCGTTTCAGAGATGTGTCATCGACATGGAGCATTGGTGTGCATTGATGGTACATTTGCCACACCATTGAACCAGAAGGCACTTTCACTCGGGGCTGACCTGGTTCTTCACTCTGCCACCAAGTATATTGGGGGCCACAATGATGTAAGCCCGCCTGATATGTTCTTTTTTTTTTTTTTTTTGGTTTTATTACTCGAGGAATCGGGATTTAAATTATTAATCAATTAAGAGTTTTGTGAGCATTTTTTCCCCTAACAATGGAATTTACCAAGCATTGTCTTTTAGGTCCTTGCTGGTTGTGTAAGTGGTTCTCTGAAACTGGTTTCCGAGATTCGGAATCTTCATCATGTGATAGGCGGTGCCTTAAATCCAGTGAGTCATTCTCTTATGCTGTTTAATTTTCCATCTTTCACTTATTGGTTGTGGAGTAACGGTTCTTGATGATTGAATCTTCCATTGGTTTCCTGCGCTCATTTTAACCATTTTTTGCGCCAAGCCCTACTGTCTAATTAATTGCTGTTTCTTCATCCTACAGAATGCTGCTTACTTGATTATACGAGGCATGAAGACGTTGCATCTTCGTGTTCAGCAGCAGAATTCCTCAGCTCTTAGGATGGCAAAGCTTTTAGAGGCTCATCCTAAGGTATGCCATTTAATTTATCCAGCTGCATGTTGTTTCATACGTTTAATTTACTACCCACTAATAGACCAAGGCAGTGCAAAGGAACAAAAGTAAAATTCATTATTGAACCTTTAATTCCAAAAGTTATGAAGCGTTGGGGCATCTAATAGCAAGGATGTAATTATAAATGAGTGGTATGCGTTGCATGTTCCTCGGGAGTAAATTAACCAATGTCGCATATCGACACCTAGTTCAATTTATACATTAACTGGATACAATTGTCTGCTCACAAATTCATTTACATTGGATGTGACAAAATTATGTCTCTACTGTCTGCAGATCAAATGTGTTTATTACCCTGGACTGCCTAGTCATCCCGAGCACAATCTTGCTAAAAGGCAGATGACTGGTTTTGGGGGCGTAGTTAGCTTCGAGGTAAGGAAAACGACCGATGATCCATCTCATCATTTGAAGGGTCTGTCCCTGTAGTCTTTTACCCCACCTCCACCAAGTTTGTTTCATTAGTTTCTTCATTCTGGTGCAGGTTGATGGCGATATAACGACCACCATAAAATTCATCGACTCTTTGAAAATTCCATATATTGCTCCATCATTTGGTGGGTGCGAGAGTATCATAGACCAGCCGGCTATAATGTCATATTGGTAAACATACAATTCTGACTTTTGACGCTTTTGTTTAGTAGGAGAATGAATACGTATTTATGCTTTTATGTGGGTGGTGGAAGTATTTTAACCTTTTGGTAATGGGAATGGAAATGGAATAGGGATCTTCATCAGACAGAGAGGCTGAAGTATGGGATAAAGGACAACTTGGTGCGCTTCAGCATTGGAATTGAAGACTTCGAGGATTTGAAGGCTGATATTCTGCAGGCTCTTGATGCCATTTAAAGCCTAAGCACTGCCCCATTCCAAATACAGATAATCAAGTCCTCTCTCTGTTTATTTGTCATCATCTTGCTTTGGTCTTGAGTGGTTGGTGCGTCGATTGAATCCCTTATCCCCATTCCCTCAGGAACAAAAAATAAACTCAGACAGACATTGTTGTTATTTTCTTTGACAAAAGACACAAGGTCTTTATTTTTTTACTACTGAAATAAGGTGGTTAGTCGTTACTATATGCATTTATGAACGGTAGAAAAGTCTTTTAAAGGTAGAAAAGTCTTTTAAAACATTTCAAAATGATGTCACAAACTTAAACATTTAAAAAAAAAAATGATATTATTAATAGCAATACAG ATGTGTGCCAGCACGATGATGCTGCTGGCGTTGGTTCCGGCTGGAGGGCATATCGTGACGACCACAGATTGCTACAGGAAGACGAGAATTTTTATTGAGACCTTACTTCCCAAAATGGGAATCACGGCTACCACCATTGATCCTGCAGATATGAACGCCCTAGAAGTAGCTCTGAAAGAGAATAATGTTTCTCTTTTCTTCACTGAATCCCCAACTAATCCATTTCTGAGATGCGTTGACATTAAACTCGTTTCAGAGATGTGTCATCGACATGGAGCATTGGTGTGCATTGATGGTACATTTGCCACACCATTGAACCAGAAGGCACTTTCACTCGGGGCTGACCTGGTTCTTCACTCTGCCACCAAGTATATTGGGGGCCACAATGATGTCCTTGCTGGTTGTGTAAGTGGTTCTCTGAAACTGGTTTCCGAGATTCGGAATCTTCATCATGTGATAGGCGGTGCCTTAAATCCAAATGCTGCTTACTTGATTATACGAGGCATGAAGACGTTGCATCTTCGTGTTCAGCAGCAGAATTCCTCAGCTCTTAGGATGGCAAAGCTTTTAGAGGCTCATCCTAAGATCAAATGTGTTTATTACCCTGGACTGCCTAGTCATCCCGAGCACAATCTTGCTAAAAGGCAGATGACTGGTTTTGGGGGCGTAGTTAGCTTCGAGGTAAGGAAAACGACCGATGATCCATCTCATCATTTGAAGGGTCTGTCCCTGGATCTTCATCAGACAGAGAGGCTGAAGTATGGGATAAAGGACAACTTGGTGCGCTTCAGCATTGGAATTGAAGACTTCGAGGATTTGAAGGCTGATATTCTGCAGGCTCTTGATGCCATTTAAAGCCTAAGCACTGCCCCATTCCAAATACAGATAATCAAGTCCTCTCTCTGTTTATTTGTCATCATCTTGCTTTGGTCTTGAGTGGTTGGTGCGTCGATTGAATCCCTTATCCCCATTCCCTCAGGAACAAAAAATAAACTCAGACAGACATTGTTGTTATTTTCTTTGACAAAAGACACAAGGTCTTTATTTTTTTACTACTGAAATAAGGTGGTTAGTCGTTACTATATGCATTTATGAACGGTAGAAAAGTCTTTTAAAGGTAGAAAAGTCTTTTAAAACATTTCAAAATGATGTCACAAACTTAAACATTTAAAAAAAAAAATGATATTATTAATAGCAATACAG ATGTGTGCCAGCACGATGATGCTGCTGGCGTTGGTTCCGGCTGGAGGGCATATCGTGACGACCACAGATTGCTACAGGAAGACGAGAATTTTTATTGAGACCTTACTTCCCAAAATGGGAATCACGGCTACCACCATTGATCCTGCAGATATGAACGCCCTAGAAGTAGCTCTGAAAGAGAATAATGTTTCTCTTTTCTTCACTGAATCCCCAACTAATCCATTTCTGAGATGCGTTGACATTAAACTCGTTTCAGAGATGTGTCATCGACATGGAGCATTGGTGTGCATTGATGGTACATTTGCCACACCATTGAACCAGAAGGCACTTTCACTCGGGGCTGACCTGGTTCTTCACTCTGCCACCAAGTATATTGGGGGCCACAATGATGTCCTTGCTGGTTGTGTAAGTGGTTCTCTGAAACTGGTTTCCGAGATTCGGAATCTTCATCATGTGATAGGCGGTGCCTTAAATCCAAATGCTGCTTACTTGATTATACGAGGCATGAAGACGTTGCATCTTCGTGTTCAGCAGCAGAATTCCTCAGCTCTTAGGATGGCAAAGCTTTTAGAGGCTCATCCTAAGATCAAATGTGTTTATTACCCTGGACTGCCTAGTCATCCCGAGCACAATCTTGCTAAAAGGCAGATGACTGGTTTTGGGGGCGTAGTTAGCTTCGAGGTAAGGAAAACGACCGATGATCCATCTCATCATTTGAAGGGTCTGTCCCTGGATCTTCATCAGACAGAGAGGCTGAAGTATGGGATAAAGGACAACTTGGTGCGCTTCAGCATTGGAATTGAAGACTTCGAGGATTTGAAGGCTGATATTCTGCAGGCTCTTGATGCCATTTAA MCASTMMLLALVPAGGHIVTTTDCYRKTRIFIETLLPKMGITATTIDPADMNALEVALKENNVSLFFTESPTNPFLRCVDIKLVSEMCHRHGALVCIDGTFATPLNQKALSLGADLVLHSATKYIGGHNDVLAGCVSGSLKLVSEIRNLHHVIGGALNPNAAYLIIRGMKTLHLRVQQQNSSALRMAKLLEAHPKIKCVYYPGLPSHPEHNLAKRQMTGFGGVVSFEVRKTTDDPSHHLKGLSLDLHQTERLKYGIKDNLVRFSIGIEDFEDLKADILQALDAI Homology
BLAST of CmoCh14G005800 vs. ExPASy Swiss-Prot
Match: P55217 (Cystathionine gamma-synthase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CGS1 PE=1 SV=3) HSP 1 Score: 456.8 bits (1174), Expect = 1.7e-127 Identity = 227/307 (73.94%), Postives = 251/307 (81.76%), Query Frame = 0
BLAST of CmoCh14G005800 vs. ExPASy Swiss-Prot
Match: Q9C876 (Probable cystathionine gamma-synthase 2 OS=Arabidopsis thaliana OX=3702 GN=CGS2 PE=3 SV=1) HSP 1 Score: 383.3 bits (983), Expect = 2.5e-105 Identity = 189/306 (61.76%), Postives = 229/306 (74.84%), Query Frame = 0
BLAST of CmoCh14G005800 vs. ExPASy Swiss-Prot
Match: P0A4K2 (Cystathionine beta-lyase OS=Lactococcus lactis subsp. lactis (strain IL1403) OX=272623 GN=metC PE=3 SV=1) HSP 1 Score: 221.1 bits (562), Expect = 1.6e-56 Identity = 121/298 (40.60%), Postives = 183/298 (61.41%), Query Frame = 0
BLAST of CmoCh14G005800 vs. ExPASy Swiss-Prot
Match: A2RM21 (Cystathionine beta-lyase OS=Lactococcus lactis subsp. cremoris (strain MG1363) OX=416870 GN=metC PE=1 SV=1) HSP 1 Score: 221.1 bits (562), Expect = 1.6e-56 Identity = 121/298 (40.60%), Postives = 183/298 (61.41%), Query Frame = 0
BLAST of CmoCh14G005800 vs. ExPASy Swiss-Prot
Match: Q1M0P5 (Cystathionine gamma-synthase OS=Helicobacter pylori OX=210 GN=metB PE=1 SV=1) HSP 1 Score: 214.5 bits (545), Expect = 1.5e-54 Identity = 117/301 (38.87%), Postives = 176/301 (58.47%), Query Frame = 0
BLAST of CmoCh14G005800 vs. ExPASy TrEMBL
Match: A0A6J1F2I5 (cystathionine gamma-synthase 1, chloroplastic-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111441806 PE=3 SV=1) HSP 1 Score: 526.2 bits (1354), Expect = 8.7e-146 Identity = 269/307 (87.62%), Postives = 271/307 (88.27%), Query Frame = 0
BLAST of CmoCh14G005800 vs. ExPASy TrEMBL
Match: A0A6J1F8G5 (cystathionine gamma-synthase 1, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111441806 PE=3 SV=1) HSP 1 Score: 526.2 bits (1354), Expect = 8.7e-146 Identity = 269/307 (87.62%), Postives = 271/307 (88.27%), Query Frame = 0
BLAST of CmoCh14G005800 vs. ExPASy TrEMBL
Match: A0A6J1J077 (cystathionine gamma-synthase 1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111482275 PE=3 SV=1) HSP 1 Score: 520.8 bits (1340), Expect = 3.6e-144 Identity = 265/307 (86.32%), Postives = 271/307 (88.27%), Query Frame = 0
BLAST of CmoCh14G005800 vs. ExPASy TrEMBL
Match: A0A5A7UJ70 (Cystathionine gamma-synthase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold135G001700 PE=3 SV=1) HSP 1 Score: 513.5 bits (1321), Expect = 5.8e-142 Identity = 258/307 (84.04%), Postives = 270/307 (87.95%), Query Frame = 0
BLAST of CmoCh14G005800 vs. ExPASy TrEMBL
Match: A0A0A0LG06 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G824870 PE=3 SV=1) HSP 1 Score: 513.5 bits (1321), Expect = 5.8e-142 Identity = 259/307 (84.36%), Postives = 270/307 (87.95%), Query Frame = 0
BLAST of CmoCh14G005800 vs. TAIR 10
Match: AT3G01120.1 (Pyridoxal phosphate (PLP)-dependent transferases superfamily protein ) HSP 1 Score: 456.8 bits (1174), Expect = 1.2e-128 Identity = 227/307 (73.94%), Postives = 251/307 (81.76%), Query Frame = 0
BLAST of CmoCh14G005800 vs. TAIR 10
Match: AT1G33320.1 (Pyridoxal phosphate (PLP)-dependent transferases superfamily protein ) HSP 1 Score: 383.3 bits (983), Expect = 1.7e-106 Identity = 189/306 (61.76%), Postives = 229/306 (74.84%), Query Frame = 0
BLAST of CmoCh14G005800 vs. TAIR 10
Match: AT3G57050.1 (cystathionine beta-lyase ) HSP 1 Score: 171.0 bits (432), Expect = 1.4e-42 Identity = 102/302 (33.77%), Postives = 153/302 (50.66%), Query Frame = 0
BLAST of CmoCh14G005800 vs. TAIR 10
Match: AT3G57050.2 (cystathionine beta-lyase ) HSP 1 Score: 171.0 bits (432), Expect = 1.4e-42 Identity = 102/302 (33.77%), Postives = 153/302 (50.66%), Query Frame = 0
BLAST of CmoCh14G005800 vs. TAIR 10
Match: AT3G57050.3 (cystathionine beta-lyase ) HSP 1 Score: 154.5 bits (389), Expect = 1.3e-37 Identity = 79/204 (38.73%), Postives = 122/204 (59.80%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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