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CmoCh14G005440 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTGCGATGGTTCCAAATTCCCAAGGACAAAACCGTAATTTACTATCCCTCCTCTCTCTCCCGACTGTAGTTTTGCCCCCCCCCCTCCGTGGTCAATCAAAATCCTCCAAATCGAAGTTTTTCCTCACACACACTCTCACTCTCACTGGAACTCTCTCTTCTTGTTTCGCTGAGATTCTTCCTCCTAGGGTTTAATTGCAGTTTCCATGGCTTCCTCGTCCTCTGATCCTGGCTTCAAACACGAACCAGGTTCTTGTAGTGCTGCTGCTGCTGTTGCCGGAGGAGGAGCGGCGGAATCTTCGGAAGTTGTAATGGCGAATGATCAGCTTTTACTGTACAGAGGGTTGAAGAAAGCGAAGAAAGAGAGAGGTTGTACTGCCAAAGAGCGGATCAGTAAAATGCCTCCGTGTGCTGCTGGAAAAAGAAGTTCTATATACCGCGGAGTCACAAGGTAATTTTGATATCATACGGCTTTGGAGCTTGTGAAGCGTTTGATTTCTGATATATTGAAGAGTTCTGTTTTTCTGTTTTTCTTTCTTTTTTGTTTGGAAGTGATCGAGTTTAATTAGCTTACAGATTCTCTAAATTTAATTGGAGAAGTGTACAATTGTTTCTCACGATTCGCAGCCAAATTTGATAGTGTGTAAAGAATGTGCTGTTCGTTCGTTCCGAAAAGCGTTTAGTTATGCACGAAAACAGAAGCTGAAATCGATCATTCTCATGTTGGTGAAAGAGAGAGTTACTGAATTGGCTTAATGATTAACTGCATCTTAAGTAGAGCTAGACATAAAGGGAATTTTGGAACATTACTGATCTGTCTACAGGTGTGGTATATAGGACCTTAATTATTGAGTTCATCGTAATCATCATTCTGTTGAAGTCGCCTGCCTCATTTGGTACCATATCAAGTCAGTAGATGTGGGCAATACACGTTATTATCATAAGATGATCAATTGTTTGGTTAACCATAAAGGTGCTTTCTTATTTTTTTATTTAGCGAGAATTGGTTACCGGACATTGCTTGTGATGTACGCCTGTTCTTTATCTTTACCTTTTTCTCTGCTGACAAACGCCATTGAATGGTTTGATGATATTAGGCATAGATGGACTGGTCGTTATGAAGCTCATCTTTGGGATAAAAGTACATGGAACCAGAACCAGAACAAAAAGGGAAAGCAAGGTCTGTTTCTCTCTCACATACACACAAATATTGGTGTGAAACCAATCACTGATTTGCTTGTGATTTCGGAGTACTGACATCATTTTTATCTTTTGTCTTTTATTTAAAATGTGCATGGACGGCATATGATTGATCATTCCAGTGTATCTGGGTAAGTTAGACTTCTGATTTCTTTTCCTTTATATTGTTTTTAACATCGACTGAGACTAGATTATTTTTCCCTTTACACTTATTAATGAACAACACGTATCTACAGGGGCATATGATGAAGAAGAGGCCGCTGCTAGGGCTTACGATTTGGCTGCGTTAAAATATTGGGGTCCTGGGACTCTTATTAACTTTCCAGTGAGATGTCATTTAGTCACCTTCTCCTTCAAGAAAAGGAAAAACGAAAAAAAAAAAAAAAGAAATTGATTCTTTTATGACCATGGTGTTTCATAAATTGTTTTTATGCATACTTTGAAGCATGCATTCCTCTTTCTGATCCTTGATCTTACAAGTATTGGAGTTCTAATTTAAATTGTACGACACTTTCTAGCTTTTGAACGAGTGTATTAAATATGGATGTTATAGAATATTACCACCTTACAGAGTTTTGGAAAAAGTATTTTATTATCTAGTGTAGTATTTTCAGTATCCAACTTGTATGCTTTGTTCTGCTTGACTTTTCTTTGTGTAATAAGAAATGGAACTTCATTTTGCAGGTGACTGATTATTCAAGGGACCTTGAAGAAATGCAGAATGTTTCAAGAGAGGAATACCTTGCATCCCTAAGGAGGTAAGTTGAAACAGTTGAAACATCTTTTATGGTACAATCGGCTGCTACTCATATAATTATATACTTTTCAGAAAGAGCAGTGGATTCTCCAGGGGAATATCCAAATATCGAGGTCTCTCGAGGTATTTTTTTTCCCCTCACTATCATGCTCTTGATTGAATTCACTTTTGCTTCCGCAAATTAATATATTGCTTATATACTAACATGCAACTGATGCTATTTCTTTAGAGTCCTTTGAGGTAGAATAAACTCTTTGAATCCATCTATTATTTTCTTTCTTTTCAATTTTCTTTTTTTACTTAAACTTGCAAATTTTCTTTATATCATTGAAATTTTGATTTAGAGTATAATATTTACATTATTGTTGTGGCTTCAAATGAATTCTTGATGGACATCATGCACACTTGAAGTCGTCTTATAAATTAATAGTATCACTATTCATGTGACTTGCATTTTGTTGATCTGTGTTAACTAATGTTGATGCATTTATGAACCAGTCGTTGGGATCCTTCATTTAGTCGTGTGCCGGGCCCTGAGTATATCAACAGCATAAACTATGGTAAGTTGTCTTAACTTATTATTATATCATGTCTCTAGGTTCAAGGACAGTTCTCTCGTTGGATTTCTTTGATTTCTGAGTTTATACTTAAAAGTGGACAAGAATTTCTCAGTGCCTACCCTCCAATGTAATCTTAAGGTGCTGGAGATGATCAAGCAACAGAAGGTGAGTTCGTCCCAGGCTTCTGCATTGAAAAGAAGATTGACTTAACAAGTCACATTAAATGGTGGGGGCCCAACAAAACTCGAACGGCAAGTGCTGGCTCAAAGTCATCAGAAGAAGACAAACATAGTAGTTGTGCTGGAGAAGTTGGCAGTGAACTCAAAGCTCTGGGACAGACCACCCGTCCTACGGAGCCATATGAGATGCCCTGTTTGGGTACATTACATGATGTAAAGAAGACTACTTCCAGGGTCTCTGCTTTAAGCATCTTGTCACGTTCCGCAGCCTACAAGAGTTTGCAGGAGAAAGCTTTGAAATTACAGGAAATTAACAATGAGAATGATGAGAATGAAAATAAAAACACTGTTAACAAGATAGATCATGGCAAAGTGGTTGAAACACATACAAGTCATGGTGGTGATCCCAGCGAGAGATATGGGGTTGCTTTCGGAACAAGTGGTGGATTGCCACTTCAGAGAAATATGTTCCCCTTGACTTCTTTCTTAACTGCACCTCTTCTTAGTAGTTACAACACAGTTGATCCACTGGGAGATCCGATTCATTGGACATCTCTCGTTTCTGTTCTTCCTACTGGACTTTCTCGTGCAGCCGAGGTTAGTATATTCACTATCGTTGTTTTTGAGATGACTATTAGAAGGATGAAAATCACTTTTAAGGAAATAAAGTCTTATGGTATTTGGTTGCATCTTAAGTAAGAGGCAATTTCTGAAAATTCTAAAAAAACTAAAAACATTTAGACGACTTCGGAAATAAACATTTGATTATTGCTTTGTCTGAAAGTGCTTATAGGAATCTATTCTCAAAAGATATTCCAGTTTTACTCATAATAAATGTTAATGGTTCAGTCTGCGACCTGGAAGATGATATGGTTTTAGTGAAACATATTGTGTTGCTTTATATCCAAAGGGACGTGGAGAGCTGCTATTGCTTTCATATAACCCTCGGTTCCATAATGCAGGTTACAAAAACGGAAACCTCTTCAACATACACTTTGTTTCAACCCGAGGAATAAAGTTCGAGGAATGTCTCGCGTACCCCAACAATGATGTTCGAGTTTAACTCAGTTCGACTGGGTTTCTGTGCTGATTTTGTAGGATCTCACATGAAAACAAGCTTTCAGGAATAAAGCTTTACATAAATCACAATGCATCATACATACTCACCATCACCTGAGGCTTTAAAACGTAGTAGCGATGATCACGAAAGGAAACCCCATACGGTTGAAGAAGAAAGGAAAAAATATCAAGTCTTAGAATATCACCCGTTTGTTTTGTCCTGGTTGTTTTATATTATGCATATGTATCTCTATCTGAAAGTTATAGTTATATAAATATGATTTACTTCTTGAATACATATATCCAGTTATCGATATCAAGATCTCGCTGCTGTTTCCCA CTGCGATGGTTCCAAATTCCCAAGGACAAAACCGTAATTTACTATCCCTCCTCTCTCTCCCGACTGTAGTTTTGCCCCCCCCCCTCCGTGGTCAATCAAAATCCTCCAAATCGAAGTTTTTCCTCACACACACTCTCACTCTCACTGGAACTCTCTCTTCTTGTTTCGCTGAGATTCTTCCTCCTAGGGTTTAATTGCAGTTTCCATGGCTTCCTCGTCCTCTGATCCTGGCTTCAAACACGAACCAGGTTCTTGTAGTGCTGCTGCTGCTGTTGCCGGAGGAGGAGCGGCGGAATCTTCGGAAGTTGTAATGGCGAATGATCAGCTTTTACTGTACAGAGGGTTGAAGAAAGCGAAGAAAGAGAGAGGTTGTACTGCCAAAGAGCGGATCAGTAAAATGCCTCCGTGTGCTGCTGGAAAAAGAAGTTCTATATACCGCGGAGTCACAAGGCATAGATGGACTGGTCGTTATGAAGCTCATCTTTGGGATAAAAGTACATGGAACCAGAACCAGAACAAAAAGGGAAAGCAAGTGTATCTGGGGGCATATGATGAAGAAGAGGCCGCTGCTAGGGCTTACGATTTGGCTGCGTTAAAATATTGGGGTCCTGGGACTCTTATTAACTTTCCAGTGACTGATTATTCAAGGGACCTTGAAGAAATGCAGAATGTTTCAAGAGAGGAATACCTTGCATCCCTAAGGAGAAAGAGCAGTGGATTCTCCAGGGGAATATCCAAATATCGAGGTCTCTCGAGTCGTTGGGATCCTTCATTTAGTCGTGTGCCGGGCCCTGAGTATATCAACAGCATAAACTATGGTGCTGGAGATGATCAAGCAACAGAAGGTGAGTTCGTCCCAGGCTTCTGCATTGAAAAGAAGATTGACTTAACAAGTCACATTAAATGGTGGGGGCCCAACAAAACTCGAACGGCAAGTGCTGGCTCAAAGTCATCAGAAGAAGACAAACATAGTAGTTGTGCTGGAGAAGTTGGCAGTGAACTCAAAGCTCTGGGACAGACCACCCGTCCTACGGAGCCATATGAGATGCCCTGTTTGGGTACATTACATGATGTAAAGAAGACTACTTCCAGGGTCTCTGCTTTAAGCATCTTGTCACGTTCCGCAGCCTACAAGAGTTTGCAGGAGAAAGCTTTGAAATTACAGGAAATTAACAATGAGAATGATGAGAATGAAAATAAAAACACTGTTAACAAGATAGATCATGGCAAAGTGGTTGAAACACATACAAGTCATGGTGGTGATCCCAGCGAGAGATATGGGGTTGCTTTCGGAACAAGTGGTGGATTGCCACTTCAGAGAAATATGTTCCCCTTGACTTCTTTCTTAACTGCACCTCTTCTTAGTAGTTACAACACAGTTGATCCACTGGGAGATCCGATTCATTGGACATCTCTCGTTTCTGTTCTTCCTACTGGACTTTCTCGTGCAGCCGAGGTTACAAAAACGGAAACCTCTTCAACATACACTTTGTTTCAACCCGAGGAATAAAGTTCGAGGAATGTCTCGCGTACCCCAACAATGATGTTCGAGTTTAACTCAGTTCGACTGGGTTTCTGTGCTGATTTTGTAGGATCTCACATGAAAACAAGCTTTCAGGAATAAAGCTTTACATAAATCACAATGCATCATACATACTCACCATCACCTGAGGCTTTAAAACGTAGTAGCGATGATCACGAAAGGAAACCCCATACGGTTGAAGAAGAAAGGAAAAAATATCAAGTCTTAGAATATCACCCGTTTGTTTTGTCCTGGTTGTTTTATATTATGCATATGTATCTCTATCTGAAAGTTATAGTTATATAAATATGATTTACTTCTTGAATACATATATCCAGTTATCGATATCAAGATCTCGCTGCTGTTTCCCA ATGGCTTCCTCGTCCTCTGATCCTGGCTTCAAACACGAACCAGGTTCTTGTAGTGCTGCTGCTGCTGTTGCCGGAGGAGGAGCGGCGGAATCTTCGGAAGTTGTAATGGCGAATGATCAGCTTTTACTGTACAGAGGGTTGAAGAAAGCGAAGAAAGAGAGAGGTTGTACTGCCAAAGAGCGGATCAGTAAAATGCCTCCGTGTGCTGCTGGAAAAAGAAGTTCTATATACCGCGGAGTCACAAGGCATAGATGGACTGGTCGTTATGAAGCTCATCTTTGGGATAAAAGTACATGGAACCAGAACCAGAACAAAAAGGGAAAGCAAGTGTATCTGGGGGCATATGATGAAGAAGAGGCCGCTGCTAGGGCTTACGATTTGGCTGCGTTAAAATATTGGGGTCCTGGGACTCTTATTAACTTTCCAGTGACTGATTATTCAAGGGACCTTGAAGAAATGCAGAATGTTTCAAGAGAGGAATACCTTGCATCCCTAAGGAGAAAGAGCAGTGGATTCTCCAGGGGAATATCCAAATATCGAGGTCTCTCGAGTCGTTGGGATCCTTCATTTAGTCGTGTGCCGGGCCCTGAGTATATCAACAGCATAAACTATGGTGCTGGAGATGATCAAGCAACAGAAGGTGAGTTCGTCCCAGGCTTCTGCATTGAAAAGAAGATTGACTTAACAAGTCACATTAAATGGTGGGGGCCCAACAAAACTCGAACGGCAAGTGCTGGCTCAAAGTCATCAGAAGAAGACAAACATAGTAGTTGTGCTGGAGAAGTTGGCAGTGAACTCAAAGCTCTGGGACAGACCACCCGTCCTACGGAGCCATATGAGATGCCCTGTTTGGGTACATTACATGATGTAAAGAAGACTACTTCCAGGGTCTCTGCTTTAAGCATCTTGTCACGTTCCGCAGCCTACAAGAGTTTGCAGGAGAAAGCTTTGAAATTACAGGAAATTAACAATGAGAATGATGAGAATGAAAATAAAAACACTGTTAACAAGATAGATCATGGCAAAGTGGTTGAAACACATACAAGTCATGGTGGTGATCCCAGCGAGAGATATGGGGTTGCTTTCGGAACAAGTGGTGGATTGCCACTTCAGAGAAATATGTTCCCCTTGACTTCTTTCTTAACTGCACCTCTTCTTAGTAGTTACAACACAGTTGATCCACTGGGAGATCCGATTCATTGGACATCTCTCGTTTCTGTTCTTCCTACTGGACTTTCTCGTGCAGCCGAGGTTACAAAAACGGAAACCTCTTCAACATACACTTTGTTTCAACCCGAGGAATAA MASSSSDPGFKHEPGSCSAAAAVAGGGAAESSEVVMANDQLLLYRGLKKAKKERGCTAKERISKMPPCAAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGKQVYLGAYDEEEAAARAYDLAALKYWGPGTLINFPVTDYSRDLEEMQNVSREEYLASLRRKSSGFSRGISKYRGLSSRWDPSFSRVPGPEYINSINYGAGDDQATEGEFVPGFCIEKKIDLTSHIKWWGPNKTRTASAGSKSSEEDKHSSCAGEVGSELKALGQTTRPTEPYEMPCLGTLHDVKKTTSRVSALSILSRSAAYKSLQEKALKLQEINNENDENENKNTVNKIDHGKVVETHTSHGGDPSERYGVAFGTSGGLPLQRNMFPLTSFLTAPLLSSYNTVDPLGDPIHWTSLVSVLPTGLSRAAEVTKTETSSTYTLFQPEE Homology
BLAST of CmoCh14G005440 vs. ExPASy Swiss-Prot
Match: Q8GWK2 (AP2-like ethylene-responsive transcription factor At2g41710 OS=Arabidopsis thaliana OX=3702 GN=At2g41710 PE=1 SV=2) HSP 1 Score: 532.3 bits (1370), Expect = 5.0e-150 Identity = 292/448 (65.18%), Postives = 342/448 (76.34%), Query Frame = 0
BLAST of CmoCh14G005440 vs. ExPASy Swiss-Prot
Match: X5HYT8 (AP2-like ethylene-responsive transcription factor SMOS1 OS=Oryza sativa subsp. japonica OX=39947 GN=SMOS1 PE=1 SV=1) HSP 1 Score: 342.0 bits (876), Expect = 9.6e-93 Identity = 198/386 (51.30%), Postives = 252/386 (65.28%), Query Frame = 0
BLAST of CmoCh14G005440 vs. ExPASy Swiss-Prot
Match: Q6X5Y6 (Ethylene-responsive transcription factor WRI1 OS=Arabidopsis thaliana OX=3702 GN=WRI1 PE=1 SV=1) HSP 1 Score: 204.5 bits (519), Expect = 2.4e-51 Identity = 103/169 (60.95%), Postives = 124/169 (73.37%), Query Frame = 0
BLAST of CmoCh14G005440 vs. ExPASy Swiss-Prot
Match: Q94AN4 (AP2-like ethylene-responsive transcription factor At1g16060 OS=Arabidopsis thaliana OX=3702 GN=At1g16060 PE=2 SV=1) HSP 1 Score: 199.5 bits (506), Expect = 7.7e-50 Identity = 94/159 (59.12%), Postives = 121/159 (76.10%), Query Frame = 0
BLAST of CmoCh14G005440 vs. ExPASy Swiss-Prot
Match: A0JPZ8 (AP2-like ethylene-responsive transcription factor At1g79700 OS=Arabidopsis thaliana OX=3702 GN=At1g79700 PE=2 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 5.5e-48 Identity = 93/142 (65.49%), Postives = 110/142 (77.46%), Query Frame = 0
BLAST of CmoCh14G005440 vs. ExPASy TrEMBL
Match: A0A6J1F7H9 (AP2-like ethylene-responsive transcription factor At2g41710 OS=Cucurbita moschata OX=3662 GN=LOC111441563 PE=4 SV=1) HSP 1 Score: 861.7 bits (2225), Expect = 1.3e-246 Identity = 434/434 (100.00%), Postives = 434/434 (100.00%), Query Frame = 0
BLAST of CmoCh14G005440 vs. ExPASy TrEMBL
Match: A0A6J1J3C0 (AP2-like ethylene-responsive transcription factor At2g41710 OS=Cucurbita maxima OX=3661 GN=LOC111482297 PE=4 SV=1) HSP 1 Score: 850.5 bits (2196), Expect = 3.1e-243 Identity = 427/434 (98.39%), Postives = 428/434 (98.62%), Query Frame = 0
BLAST of CmoCh14G005440 vs. ExPASy TrEMBL
Match: A0A5A7UD24 (AP2-like ethylene-responsive transcription factor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold135G002230 PE=4 SV=1) HSP 1 Score: 778.9 bits (2010), Expect = 1.1e-221 Identity = 400/435 (91.95%), Postives = 411/435 (94.48%), Query Frame = 0
BLAST of CmoCh14G005440 vs. ExPASy TrEMBL
Match: A0A1S3B793 (AP2-like ethylene-responsive transcription factor At2g41710 OS=Cucumis melo OX=3656 GN=LOC103486931 PE=4 SV=1) HSP 1 Score: 778.9 bits (2010), Expect = 1.1e-221 Identity = 400/435 (91.95%), Postives = 411/435 (94.48%), Query Frame = 0
BLAST of CmoCh14G005440 vs. ExPASy TrEMBL
Match: A0A0A0LCL8 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G822440 PE=4 SV=1) HSP 1 Score: 775.4 bits (2001), Expect = 1.3e-220 Identity = 400/436 (91.74%), Postives = 412/436 (94.50%), Query Frame = 0
BLAST of CmoCh14G005440 vs. TAIR 10
Match: AT2G41710.1 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 538.5 bits (1386), Expect = 5.0e-153 Identity = 292/443 (65.91%), Postives = 342/443 (77.20%), Query Frame = 0
BLAST of CmoCh14G005440 vs. TAIR 10
Match: AT2G41710.2 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 532.3 bits (1370), Expect = 3.6e-151 Identity = 292/448 (65.18%), Postives = 342/448 (76.34%), Query Frame = 0
BLAST of CmoCh14G005440 vs. TAIR 10
Match: AT2G41710.3 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 520.8 bits (1340), Expect = 1.1e-147 Identity = 292/478 (61.09%), Postives = 342/478 (71.55%), Query Frame = 0
BLAST of CmoCh14G005440 vs. TAIR 10
Match: AT3G54320.1 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 204.5 bits (519), Expect = 1.7e-52 Identity = 103/169 (60.95%), Postives = 124/169 (73.37%), Query Frame = 0
BLAST of CmoCh14G005440 vs. TAIR 10
Match: AT3G54320.3 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 204.5 bits (519), Expect = 1.7e-52 Identity = 103/169 (60.95%), Postives = 124/169 (73.37%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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