CmoCh14G004830 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh14G004830
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	40S ribosomal protein s2
Location	Cmo_Chr14: 2394031 .. 2396305 (+)
RNA-Seq Expression	CmoCh14G004830
Synteny	CmoCh14G004830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCATACTAAGTTCGTCTCTCCATCAACTGTGCCAATTTATTGTCCAACACCTCATATCTTTTCACTCCTTCAACTTTCCCCCCTTTTCCCTATCAATGGCGGAGCGAGGCGGATTTGGACGAGGCTTCGGCGGCAGAGGTCGCGGTGGAGGTGACCGCGGCCGCGGAGGTCGCCGTCGCGCTGGTCGACGTGATGAAGAGGAGAAGTGGGTTCCTGTCACTAAGCTAGGGCGCCTCGTAAAAGAAGGTAAGATCCAGTCCTTGGAGCAGATTTATCTCCATTCTCTCCCCATAAAGGAGCACCAGATCATTGATACCCTCATTGGCCCTAGCCTAAAGGACGAGGTTATGAAGATTATGCCAGTCCAGAAGCAGACCCGTGCCGGACAGAGAACTCGTTTCAAGGCTTTCGTCGTTGTCGGCGATGGTAATGGCCATGTGGGTTTGGGAGTAAAGTGTAGTAAGGAAGTTGCCACAGCGATTCGCGGTTCCATTATTTTGGCTAAGTTGTCTGTGATCCCTGTGAGAAGAGGGTATTGGGGTAACAAGATTGGTAAGCCTCACACAGTGCCGTGTAAGGTTACTGGAAAGTGTGGATCCGTCACTGTCCAGATGGTTCCAGCGCCACGAGGTGCTGGGATTGTGGCGGCTCGAGTTCCCAAGAAGGTCTTGCAGTTCGCTGGGATCGAGGACGTGTTTACATCTTCTAGGGGATCGACTAAAACTCTCGGCAACTTTGTTAAGGTTTGGTCTAACTTAAATGGTTACTATATTCTCATAACTTCAGATTTTGGCTTTGTTCTACTAAAAATACGTTGATTTCGACTTTTGGTGCGCTTCATCATTATGAACACTAACAATTAGATGGCTATGTTTTGCTATAGTGTGTGCTGTTTTCGACCTTAAAATTTTGCAGCCTAACTGAAATGTTTCTGTGGGCTTGCATTATTAAGCTACGTTGCATTCTTTGTTACATTTTTGTGTCCTGCATCAAGATGACTGCAATTTTATGTCTGATATATCTCTTTTTTGTGTTGTTAGTCATTGATTAAGGTACTATTCAATCCTTAATCAGTTGATGATGGGTTCTAGATTGGTTGTTTGATTTCAATTTCAGTAGGGGTCGTTTGAAGCTCTTTATGCAGTAATGTTGTCCGATTGTGTATATGTTGTGTCATTGTTGGTTGCTCATAACAGTGGAATTCCACACTACATAAGAGATTGTTTCGTGGGTTGGGTGTGAGATCGAGGGGAACTAATCATTCTTATAAAAGTGTGGGAACCTCAACCTAGTAGACGTGTTTTAGAAAATTGTGAGGCTGACGATGATACGTAACAAGCCTAAGTGGACAATATCTACTAGCGGTGAGCTTGAGTGGTTATAAATGGCATCAAAGCTAAACATCGGGCAGTGTGCTAGCAAGGACGCTGGACCTCTATGGGAGTGGATTGTGAGATCCCCATTGGTTGGAGAGGCATTACTTAGAATGGTGTGGAAATCTCTCCTTAACAAATACGTTTTATAATTGTGAGGCTGCAGGCGATACGTAATGGACCAAAATGGATTTGTAGCTATTTTCTTGTCGTTAATGAGAGTTTTGTTGTTTATCAAGTGGTATTTGATTTCAATGGGGTCTTATTTCTTCGACCTTTATTGGCATTTCAGGCAACCTTCGACTGTCTGCTGAAAACTTACGGCTTCTTAACACCTGAATTTTGGAGGGAAACACGTTTCACAAAATCCCCATTCCAGGAGCACACAGATCTATTGGCGAAGCCTACCGTGAAGGCATTGTTGTTGGAAGATCCTGATAAGGTTTCTGCTTAAACTTACTCAATTTCTTCTTTCAATTCTGGGAGTATATCACTGGTTTACTTGAATGAGAAAGGCTCCACACTCTTTGTTCCCCTGGTTGAGATCTGTTACTTAGAAGGACAATTTTTTCGTGTTATGCTTTTTCTTTTTCACCAAATTTGAATTTTTACTGTAATTTATTTACCCTTTTTAGTTTCATGCATTTCATTTTGTTGCCCATATTCATTTTTGTAATTGATTAGATTCGTAGACGTTCCTACGAAGAAACAATGATGGTACTTGAACTTGGCTTATCGAGCATGTTGATCCAACCAAACAAGTTGGTAATTCAACCTAAACCATATAGATTGAAATTGATTAATCCATTTGTTTGGATTATTTAGGATCTAGATCTCTTTGACATAGTAGCTTTTGTGCATTTTCTTCCTCCAAAAACTATTCATATAGATCATTTTTTG

mRNA sequence

TTTCATACTAAGTTCGTCTCTCCATCAACTGTGCCAATTTATTGTCCAACACCTCATATCTTTTCACTCCTTCAACTTTCCCCCCTTTTCCCTATCAATGGCGGAGCGAGGCGGATTTGGACGAGGCTTCGGCGGCAGAGGTCGCGGTGGAGGTGACCGCGGCCGCGGAGGTCGCCGTCGCGCTGGTCGACGTGATGAAGAGGAGAAGTGGGTTCCTGTCACTAAGCTAGGGCGCCTCGTAAAAGAAGGTAAGATCCAGTCCTTGGAGCAGATTTATCTCCATTCTCTCCCCATAAAGGAGCACCAGATCATTGATACCCTCATTGGCCCTAGCCTAAAGGACGAGGTTATGAAGATTATGCCAGTCCAGAAGCAGACCCGTGCCGGACAGAGAACTCGTTTCAAGGCTTTCGTCGTTGTCGGCGATGGTAATGGCCATGTGGGTTTGGGAGTAAAGTGTAGTAAGGAAGTTGCCACAGCGATTCGCGGTTCCATTATTTTGGCTAAGTTGTCTGTGATCCCTGTGAGAAGAGGGTATTGGGGTAACAAGATTGGTAAGCCTCACACAGTGCCGTGTAAGGTTACTGGAAAGTGTGGATCCGTCACTGTCCAGATGGTTCCAGCGCCACGAGGTGCTGGGATTGTGGCGGCTCGAGTTCCCAAGAAGGTCTTGCAGTTCGCTGGGATCGAGGACGTGTTTACATCTTCTAGGGGATCGACTAAAACTCTCGGCAACTTTGTTAAGGCAACCTTCGACTGTCTGCTGAAAACTTACGGCTTCTTAACACCTGAATTTTGGAGGGAAACACGTTTCACAAAATCCCCATTCCAGGAGCACACAGATCTATTGGCGAAGCCTACCGTGAAGGCATTGTTGTTGGAAGATCCTGATAAGGTTTCTGCTTAAACTTACTCAATTTCTTCTTTCAATTCTGGGAGTATATCACTGGTTTACTTGAATGAGAAAGGCTCCACACTCTTTGTTCCCCTGGTTGAGATCTGTTACTTAGAAGGACAATTTTTTCGTGTTATGCTTTTTCTTTTTCACCAAATTTGAATTTTTACTGTAATTTATTTACCCTTTTTAGTTTCATGCATTTCATTTTGTTGCCCATATTCATTTTTGTAATTGATTAGATTCGTAGACGTTCCTACGAAGAAACAATGATGGTACTTGAACTTGGCTTATCGAGCATGTTGATCCAACCAAACAAGTTGGTAATTCAACCTAAACCATATAGATTGAAATTGATTAATCCATTTGTTTGGATTATTTAGGATCTAGATCTCTTTGACATAGTAGCTTTTGTGCATTTTCTTCCTCCAAAAACTATTCATATAGATCATTTTTTG

Coding sequence (CDS)

ATGGCGGAGCGAGGCGGATTTGGACGAGGCTTCGGCGGCAGAGGTCGCGGTGGAGGTGACCGCGGCCGCGGAGGTCGCCGTCGCGCTGGTCGACGTGATGAAGAGGAGAAGTGGGTTCCTGTCACTAAGCTAGGGCGCCTCGTAAAAGAAGGTAAGATCCAGTCCTTGGAGCAGATTTATCTCCATTCTCTCCCCATAAAGGAGCACCAGATCATTGATACCCTCATTGGCCCTAGCCTAAAGGACGAGGTTATGAAGATTATGCCAGTCCAGAAGCAGACCCGTGCCGGACAGAGAACTCGTTTCAAGGCTTTCGTCGTTGTCGGCGATGGTAATGGCCATGTGGGTTTGGGAGTAAAGTGTAGTAAGGAAGTTGCCACAGCGATTCGCGGTTCCATTATTTTGGCTAAGTTGTCTGTGATCCCTGTGAGAAGAGGGTATTGGGGTAACAAGATTGGTAAGCCTCACACAGTGCCGTGTAAGGTTACTGGAAAGTGTGGATCCGTCACTGTCCAGATGGTTCCAGCGCCACGAGGTGCTGGGATTGTGGCGGCTCGAGTTCCCAAGAAGGTCTTGCAGTTCGCTGGGATCGAGGACGTGTTTACATCTTCTAGGGGATCGACTAAAACTCTCGGCAACTTTGTTAAGGCAACCTTCGACTGTCTGCTGAAAACTTACGGCTTCTTAACACCTGAATTTTGGAGGGAAACACGTTTCACAAAATCCCCATTCCAGGAGCACACAGATCTATTGGCGAAGCCTACCGTGAAGGCATTGTTGTTGGAAGATCCTGATAAGGTTTCTGCTTAA

Protein sequence

MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLEDPDKVSA

Homology

[Close]

BLAST of CmoCh14G004830 vs. ExPASy Swiss-Prot
Match: Q9SCM3 (40S ribosomal protein S2-4 OS=Arabidopsis thaliana OX=3702 GN=RPS2D PE=2 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 1.0e-121
Identity = 225/257 (87.55%), Postives = 240/257 (93.39%), Query Frame = 0


Query: 3   ERGGFGRGFGGRGRG-GGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYL 62
           +RG FGRGFGGRG G GG RGRG  RRAGR  EEEKWVPVTKLGRLVKEGKI  +EQIYL
Sbjct: 11  DRGDFGRGFGGRGGGRGGPRGRG--RRAGRAPEEEKWVPVTKLGRLVKEGKITKIEQIYL 70

Query: 63  HSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKC 122
           HSLP+KE+QIID L+GPSLKDEVMKIMPVQKQTRAGQRTRFKAF+VVGD NGHVGLGVKC
Sbjct: 71  HSLPVKEYQIIDLLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFIVVGDSNGHVGLGVKC 130

Query: 123 SKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGAG 182
           SKEVATAIRG+IILAKLSV+P+RRGYWGNKIGKPHTVPCKVTGKCGSVTV+MVPAPRG+G
Sbjct: 131 SKEVATAIRGAIILAKLSVVPIRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSG 190

Query: 183 IVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTK 242
           IVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEFW+ETRF+K
Sbjct: 191 IVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFWKETRFSK 250

Query: 243 SPFQEHTD-LLAKPTVK 258
           SP+QEHTD LL  P VK
Sbjct: 251 SPYQEHTDFLLIPPGVK 265

[Close]

BLAST of CmoCh14G004830 vs. ExPASy Swiss-Prot
Match: P49688 (40S ribosomal protein S2-3 OS=Arabidopsis thaliana OX=3702 GN=RPS2C PE=1 SV=2)

HSP 1 Score: 436.4 bits (1121), Expect = 2.3e-121
Identity = 228/269 (84.76%), Postives = 242/269 (89.96%), Query Frame = 0


Query: 3   ERGGFGRGFGGRGRGG--GDRGRGGR--RRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 62
           ERG FGRGFGGRG  G  G RGRGGR  RR GR  EEEKWVPVTKLGRLV  G I+ +EQ
Sbjct: 15  ERGDFGRGFGGRGGRGDRGGRGRGGRGGRRGGRASEEEKWVPVTKLGRLVAAGHIKQIEQ 74

Query: 63  IYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 122
           IYLHSLP+KE+QIID LIGP+LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG
Sbjct: 75  IYLHSLPVKEYQIIDMLIGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 134

Query: 123 VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPR 182
           VKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTV+MVPAPR
Sbjct: 135 VKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 194

Query: 183 GAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETR 242
           G+GIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEFW+ETR
Sbjct: 195 GSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFWKETR 254

Query: 243 FTKSPFQEHTDLLAKPTVKALLLEDPDKV 268
           F++SP+QEHTD LA    KAL    PD V
Sbjct: 255 FSRSPYQEHTDFLAS---KALSTSKPDPV 280

[Close]

BLAST of CmoCh14G004830 vs. ExPASy Swiss-Prot
Match: Q8L8Y0 (40S ribosomal protein S2-1 OS=Arabidopsis thaliana OX=3702 GN=RPS2A PE=2 SV=2)

HSP 1 Score: 426.8 bits (1096), Expect = 1.8e-118
Identity = 221/260 (85.00%), Postives = 237/260 (91.15%), Query Frame = 0


Query: 3   ERGGFGRGFGGRGRGGG---DRG-RGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 62
           +RG FGRGFGG GRGGG   DRG RG  RR GR  EE KWVPVTKLGRLV + KI  LEQ
Sbjct: 15  DRGDFGRGFGG-GRGGGRGRDRGPRGRGRRGGRASEETKWVPVTKLGRLVADNKITKLEQ 74

Query: 63  IYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 122
           IYLHSLP+KE+QIID L+GP+LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG
Sbjct: 75  IYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 134

Query: 123 VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPR 182
           VKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTV+MVPAPR
Sbjct: 135 VKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 194

Query: 183 GAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETR 242
           G+GIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEFW+ETR
Sbjct: 195 GSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFWKETR 254

Query: 243 FTKSPFQEHTDLLAKPTVKA 259
           F++SP+QEHTD L+   V A
Sbjct: 255 FSRSPYQEHTDFLSTKAVSA 273

[Close]

BLAST of CmoCh14G004830 vs. ExPASy Swiss-Prot
Match: Q93VB8 (40S ribosomal protein S2-2 OS=Arabidopsis thaliana OX=3702 GN=RPS2B PE=2 SV=1)

HSP 1 Score: 426.8 bits (1096), Expect = 1.8e-118
Identity = 221/260 (85.00%), Postives = 237/260 (91.15%), Query Frame = 0


Query: 3   ERGGFGRGFGGRGRGGG---DRG-RGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 62
           +RG FGRGFGG GRGGG   DRG RG  RR GR  EE KWVPVTKLGRLV + KI  LEQ
Sbjct: 15  DRGDFGRGFGG-GRGGGRGRDRGPRGRGRRGGRASEETKWVPVTKLGRLVADNKITKLEQ 74

Query: 63  IYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 122
           IYLHSLP+KE+QIID L+GP+LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG
Sbjct: 75  IYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 134

Query: 123 VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPR 182
           VKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTV+MVPAPR
Sbjct: 135 VKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 194

Query: 183 GAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETR 242
           G+GIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEFW+ETR
Sbjct: 195 GSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFWKETR 254

Query: 243 FTKSPFQEHTDLLAKPTVKA 259
           F++SP+QEHTD L+   V A
Sbjct: 255 FSRSPYQEHTDFLSTKAVSA 273

[Close]

BLAST of CmoCh14G004830 vs. ExPASy Swiss-Prot
Match: P49154 (40S ribosomal protein S2 OS=Urechis caupo OX=6431 GN=RPS2 PE=2 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 1.1e-99
Identity = 186/251 (74.10%), Postives = 215/251 (85.66%), Query Frame = 0


Query: 4   RGGFGRGFGGRGRG-GGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLH 63
           RGGF  GFGGRGRG G  RGRG  R  G +D +++WVPVTKLGRLVK+ KI++LE+IYL 
Sbjct: 11  RGGFRGGFGGRGRGRGRGRGRGRGRGRGAKDGDKEWVPVTKLGRLVKDMKIKTLEEIYLF 70

Query: 64  SLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCS 123
           SLPIKE +IID  +G +LKDEV+KIMPVQKQTRAGQRTRFKAFV +GD NGHVGLGVKCS
Sbjct: 71  SLPIKEFEIIDFFLGDALKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCS 130

Query: 124 KEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGAGI 183
           KEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSV V+++PAPRG GI
Sbjct: 131 KEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVLVRLIPAPRGTGI 190

Query: 184 VAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKS 243
           V+A VPKK+L  AGI+D +TS+RG T TLGNF KAT+  +  TY +LTP+ WRET FTKS
Sbjct: 191 VSAPVPKKLLAMAGIDDCYTSARGQTATLGNFAKATYAAIAATYSYLTPDLWRETVFTKS 250

Query: 244 PFQEHTDLLAK 254
           P+QE+TD LAK
Sbjct: 251 PYQEYTDYLAK 261

[Close]

BLAST of CmoCh14G004830 vs. ExPASy TrEMBL
Match: A0A6J1F4N7 (40S ribosomal protein S2-4-like OS=Cucurbita moschata OX=3662 GN=LOC111442079 PE=3 SV=1)

HSP 1 Score: 526.6 bits (1355), Expect = 6.3e-146
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 0


Query: 1   MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY 60
           MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY
Sbjct: 1   MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY 60

Query: 61  LHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120
           LHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK
Sbjct: 61  LHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120

Query: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGA 180
           CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGA
Sbjct: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGA 180

Query: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFT 240
           GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFT
Sbjct: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFT 240

Query: 241 KSPFQEHTDLLAKPTVKALLLEDPDKVSA 270
           KSPFQEHTDLLAKPTVKALLLEDPDKVSA
Sbjct: 241 KSPFQEHTDLLAKPTVKALLLEDPDKVSA 269

[Close]

BLAST of CmoCh14G004830 vs. ExPASy TrEMBL
Match: A0A5D3DPL0 (40S ribosomal protein S2-3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006280 PE=3 SV=1)

HSP 1 Score: 521.2 bits (1341), Expect = 2.6e-144
Identity = 264/269 (98.14%), Postives = 269/269 (100.00%), Query Frame = 0


Query: 1   MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY 60
           MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEG+IQSLEQIY
Sbjct: 1   MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGRIQSLEQIY 60

Query: 61  LHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120
           LHSLPIKEHQI+DTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK
Sbjct: 61  LHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120

Query: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGA 180
           CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTV+MVPAPRGA
Sbjct: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 180

Query: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFT 240
           GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFT
Sbjct: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFT 240

Query: 241 KSPFQEHTDLLAKPTVKALLLEDPDKVSA 270
           KSPFQEHTDLLAKPTVKALLLEDPD+V+A
Sbjct: 241 KSPFQEHTDLLAKPTVKALLLEDPDRVTA 269

[Close]

BLAST of CmoCh14G004830 vs. ExPASy TrEMBL
Match: E5GBY7 (40S ribosomal protein s2 OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 521.2 bits (1341), Expect = 2.6e-144
Identity = 264/269 (98.14%), Postives = 269/269 (100.00%), Query Frame = 0


Query: 1   MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY 60
           MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEG+IQSLEQIY
Sbjct: 1   MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGRIQSLEQIY 60

Query: 61  LHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120
           LHSLPIKEHQI+DTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK
Sbjct: 61  LHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120

Query: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGA 180
           CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTV+MVPAPRGA
Sbjct: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 180

Query: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFT 240
           GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFT
Sbjct: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFT 240

Query: 241 KSPFQEHTDLLAKPTVKALLLEDPDKVSA 270
           KSPFQEHTDLLAKPTVKALLLEDPD+V+A
Sbjct: 241 KSPFQEHTDLLAKPTVKALLLEDPDRVTA 269

[Close]

BLAST of CmoCh14G004830 vs. ExPASy TrEMBL
Match: A0A0A0LFC7 (S5 DRBM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G816100 PE=3 SV=1)

HSP 1 Score: 521.2 bits (1341), Expect = 2.6e-144
Identity = 264/269 (98.14%), Postives = 269/269 (100.00%), Query Frame = 0


Query: 1   MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY 60
           MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY
Sbjct: 1   MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY 60

Query: 61  LHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120
           LHSLPIKEHQI+DTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK
Sbjct: 61  LHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120

Query: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGA 180
           CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTV+MVPAPRGA
Sbjct: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 180

Query: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFT 240
           GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLL+TYGFLTPEFWRETRFT
Sbjct: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLRTYGFLTPEFWRETRFT 240

Query: 241 KSPFQEHTDLLAKPTVKALLLEDPDKVSA 270
           KSPFQEHTDLLAKPTVKALLLEDPD+V+A
Sbjct: 241 KSPFQEHTDLLAKPTVKALLLEDPDRVTA 269

[Close]

BLAST of CmoCh14G004830 vs. ExPASy TrEMBL
Match: A0A1S3B7F9 (40S ribosomal protein S2-3-like OS=Cucumis melo OX=3656 GN=LOC103486852 PE=3 SV=1)

HSP 1 Score: 521.2 bits (1341), Expect = 2.6e-144
Identity = 264/269 (98.14%), Postives = 269/269 (100.00%), Query Frame = 0


Query: 1   MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIY 60
           MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEG+IQSLEQIY
Sbjct: 1   MAERGGFGRGFGGRGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGRIQSLEQIY 60

Query: 61  LHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120
           LHSLPIKEHQI+DTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK
Sbjct: 61  LHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 120

Query: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGA 180
           CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTV+MVPAPRGA
Sbjct: 121 CSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGA 180

Query: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFT 240
           GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFT
Sbjct: 181 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFT 240

Query: 241 KSPFQEHTDLLAKPTVKALLLEDPDKVSA 270
           KSPFQEHTDLLAKPTVKALLLEDPD+V+A
Sbjct: 241 KSPFQEHTDLLAKPTVKALLLEDPDRVTA 269

[Close]

BLAST of CmoCh14G004830 vs. TAIR 10
Match: AT3G57490.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 437.6 bits (1124), Expect = 7.4e-123
Identity = 225/257 (87.55%), Postives = 240/257 (93.39%), Query Frame = 0


Query: 3   ERGGFGRGFGGRGRG-GGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYL 62
           +RG FGRGFGGRG G GG RGRG  RRAGR  EEEKWVPVTKLGRLVKEGKI  +EQIYL
Sbjct: 11  DRGDFGRGFGGRGGGRGGPRGRG--RRAGRAPEEEKWVPVTKLGRLVKEGKITKIEQIYL 70

Query: 63  HSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKC 122
           HSLP+KE+QIID L+GPSLKDEVMKIMPVQKQTRAGQRTRFKAF+VVGD NGHVGLGVKC
Sbjct: 71  HSLPVKEYQIIDLLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFIVVGDSNGHVGLGVKC 130

Query: 123 SKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPRGAG 182
           SKEVATAIRG+IILAKLSV+P+RRGYWGNKIGKPHTVPCKVTGKCGSVTV+MVPAPRG+G
Sbjct: 131 SKEVATAIRGAIILAKLSVVPIRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSG 190

Query: 183 IVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTK 242
           IVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEFW+ETRF+K
Sbjct: 191 IVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFWKETRFSK 250

Query: 243 SPFQEHTD-LLAKPTVK 258
           SP+QEHTD LL  P VK
Sbjct: 251 SPYQEHTDFLLIPPGVK 265

[Close]

BLAST of CmoCh14G004830 vs. TAIR 10
Match: AT2G41840.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 436.4 bits (1121), Expect = 1.6e-122
Identity = 228/269 (84.76%), Postives = 242/269 (89.96%), Query Frame = 0


Query: 3   ERGGFGRGFGGRGRGG--GDRGRGGR--RRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 62
           ERG FGRGFGGRG  G  G RGRGGR  RR GR  EEEKWVPVTKLGRLV  G I+ +EQ
Sbjct: 15  ERGDFGRGFGGRGGRGDRGGRGRGGRGGRRGGRASEEEKWVPVTKLGRLVAAGHIKQIEQ 74

Query: 63  IYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 122
           IYLHSLP+KE+QIID LIGP+LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG
Sbjct: 75  IYLHSLPVKEYQIIDMLIGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 134

Query: 123 VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPR 182
           VKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTV+MVPAPR
Sbjct: 135 VKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 194

Query: 183 GAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETR 242
           G+GIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEFW+ETR
Sbjct: 195 GSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFWKETR 254

Query: 243 FTKSPFQEHTDLLAKPTVKALLLEDPDKV 268
           F++SP+QEHTD LA    KAL    PD V
Sbjct: 255 FSRSPYQEHTDFLAS---KALSTSKPDPV 280

[Close]

BLAST of CmoCh14G004830 vs. TAIR 10
Match: AT1G58983.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 426.8 bits (1096), Expect = 1.3e-119
Identity = 221/260 (85.00%), Postives = 237/260 (91.15%), Query Frame = 0


Query: 3   ERGGFGRGFGGRGRGGG---DRG-RGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 62
           +RG FGRGFGG GRGGG   DRG RG  RR GR  EE KWVPVTKLGRLV + KI  LEQ
Sbjct: 15  DRGDFGRGFGG-GRGGGRGRDRGPRGRGRRGGRASEETKWVPVTKLGRLVADNKITKLEQ 74

Query: 63  IYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 122
           IYLHSLP+KE+QIID L+GP+LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG
Sbjct: 75  IYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 134

Query: 123 VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPR 182
           VKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTV+MVPAPR
Sbjct: 135 VKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 194

Query: 183 GAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETR 242
           G+GIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEFW+ETR
Sbjct: 195 GSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFWKETR 254

Query: 243 FTKSPFQEHTDLLAKPTVKA 259
           F++SP+QEHTD L+   V A
Sbjct: 255 FSRSPYQEHTDFLSTKAVSA 273

[Close]

BLAST of CmoCh14G004830 vs. TAIR 10
Match: AT1G59359.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 426.8 bits (1096), Expect = 1.3e-119
Identity = 221/260 (85.00%), Postives = 237/260 (91.15%), Query Frame = 0


Query: 3   ERGGFGRGFGGRGRGGG---DRG-RGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 62
           +RG FGRGFGG GRGGG   DRG RG  RR GR  EE KWVPVTKLGRLV + KI  LEQ
Sbjct: 15  DRGDFGRGFGG-GRGGGRGRDRGPRGRGRRGGRASEETKWVPVTKLGRLVADNKITKLEQ 74

Query: 63  IYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 122
           IYLHSLP+KE+QIID L+GP+LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG
Sbjct: 75  IYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 134

Query: 123 VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPR 182
           VKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTV+MVPAPR
Sbjct: 135 VKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 194

Query: 183 GAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETR 242
           G+GIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEFW+ETR
Sbjct: 195 GSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFWKETR 254

Query: 243 FTKSPFQEHTDLLAKPTVKA 259
           F++SP+QEHTD L+   V A
Sbjct: 255 FSRSPYQEHTDFLSTKAVSA 273

[Close]

BLAST of CmoCh14G004830 vs. TAIR 10
Match: AT1G58380.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 426.8 bits (1096), Expect = 1.3e-119
Identity = 221/260 (85.00%), Postives = 237/260 (91.15%), Query Frame = 0


Query: 3   ERGGFGRGFGGRGRGGG---DRG-RGGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQ 62
           +RG FGRGFGG GRGGG   DRG RG  RR GR  EE KWVPVTKLGRLV + KI  LEQ
Sbjct: 15  DRGDFGRGFGG-GRGGGRGRDRGPRGRGRRGGRASEETKWVPVTKLGRLVADNKITKLEQ 74

Query: 63  IYLHSLPIKEHQIIDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 122
           IYLHSLP+KE+QIID L+GP+LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG
Sbjct: 75  IYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLG 134

Query: 123 VKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVQMVPAPR 182
           VKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTV+MVPAPR
Sbjct: 135 VKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPR 194

Query: 183 GAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETR 242
           G+GIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEFW+ETR
Sbjct: 195 GSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPEFWKETR 254

Query: 243 FTKSPFQEHTDLLAKPTVKA 259
           F++SP+QEHTD L+   V A
Sbjct: 255 FSRSPYQEHTDFLSTKAVSA 273

The following BLAST results are available for this feature:

BLAST of CmoCh14G004830 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SCM3	1.0e-121	87.55	40S ribosomal protein S2-4 OS=Arabidopsis thaliana OX=3702 GN=RPS2D PE=2 SV=1	[more]
P49688	2.3e-121	84.76	40S ribosomal protein S2-3 OS=Arabidopsis thaliana OX=3702 GN=RPS2C PE=1 SV=2	[more]
Q8L8Y0	1.8e-118	85.00	40S ribosomal protein S2-1 OS=Arabidopsis thaliana OX=3702 GN=RPS2A PE=2 SV=2	[more]
Q93VB8	1.8e-118	85.00	40S ribosomal protein S2-2 OS=Arabidopsis thaliana OX=3702 GN=RPS2B PE=2 SV=1	[more]
P49154	1.1e-99	74.10	40S ribosomal protein S2 OS=Urechis caupo OX=6431 GN=RPS2 PE=2 SV=1	[more]

BLAST of CmoCh14G004830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F4N7	6.3e-146	100.00	40S ribosomal protein S2-4-like OS=Cucurbita moschata OX=3662 GN=LOC111442079 PE...	[more]
A0A5D3DPL0	2.6e-144	98.14	40S ribosomal protein S2-3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
E5GBY7	2.6e-144	98.14	40S ribosomal protein s2 OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1	[more]
A0A0A0LFC7	2.6e-144	98.14	S5 DRBM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G816100 PE=...	[more]
A0A1S3B7F9	2.6e-144	98.14	40S ribosomal protein S2-3-like OS=Cucumis melo OX=3656 GN=LOC103486852 PE=3 SV=...	[more]

BLAST of CmoCh14G004830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G57490.1	7.4e-123	87.55	Ribosomal protein S5 family protein	[more]
AT2G41840.1	1.6e-122	84.76	Ribosomal protein S5 family protein	[more]
AT1G58983.1	1.3e-119	85.00	Ribosomal protein S5 family protein	[more]
AT1G59359.1	1.3e-119	85.00	Ribosomal protein S5 family protein	[more]
AT1G58380.1	1.3e-119	85.00	Ribosomal protein S5 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup	GENE3D	3.30.230.10		coord: 143..236 e-value: 3.2E-50 score: 170.2
IPR005324	Ribosomal protein S5, C-terminal	PFAM	PF03719	Ribosomal_S5_C	coord: 163..229 e-value: 1.7E-23 score: 81.8
None	No IPR available	GENE3D	3.30.160.20		coord: 37..142 e-value: 8.0E-56 score: 188.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
None	No IPR available	PANTHER	PTHR13718:SF101	40S RIBOSOMAL PROTEIN S2-1-RELATED	coord: 2..263
None	No IPR available	SUPERFAMILY	54768	dsRNA-binding domain-like	coord: 76..145
IPR005711	Ribosomal protein S5, eukaryotic/archaeal	TIGRFAM	TIGR01020	TIGR01020	coord: 33..240 e-value: 1.1E-93 score: 310.6
IPR013810	Ribosomal protein S5, N-terminal	PFAM	PF00333	Ribosomal_S5	coord: 80..144 e-value: 6.9E-30 score: 102.8
IPR013810	Ribosomal protein S5, N-terminal	PROSITE	PS50881	S5_DSRBD	coord: 80..143 score: 22.755819
IPR000851	Ribosomal protein S5	PANTHER	PTHR13718	RIBOSOMAL S SUBUNIT	coord: 2..263
IPR018192	Ribosomal protein S5, N-terminal, conserved site	PROSITE	PS00585	RIBOSOMAL_S5	coord: 97..129
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	54211	Ribosomal protein S5 domain 2-like	coord: 156..236

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh14G004830.1	CmoCh14G004830.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005840	ribosome
cellular_component	GO:0015935	small ribosomal subunit
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003723	RNA binding