CmoCh14G004520 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh14G004520
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	dehydration-responsive element-binding protein 2F
Location	Cmo_Chr14: 2186213 .. 2187486 (-)
RNA-Seq Expression	CmoCh14G004520
Synteny	CmoCh14G004520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCTCTCCGCTCTCCAAAATGGAAACTTGCAGAGACAAAAAAGTCCATTCTTCCCCACTCGTAAAGCCATGGAAGAAAGGCCCTTCACGAGGCAAAGGCGGCCCTCAGAACGCCTCCTGCGAGTACCGCGGCGTCCGGCAGCGCACTTGGGGCAAGTGGGTGGCAGAGATCCGGGAGCCCAAGAAGCGCACCAGGCTCTGGCTTGGTTCTTTTGCCACTGCTGAAGAAGCCGCCATGGCTTATGATCAAGCTGCCACTAAGCTCTATGGCCCTGATGCTTATCTTAATCTTCCCCATTTGCTTCATAATCTTCCTCGTAATGACATTAATAATGGTTCTAAATCTAATTTCCTCAAATGGGTTCCTTCTAAAAACTTCGTTTCTATGTTCTCTCATCCCCGCCCTGCAGCAACCTTTATGCTTAATCTCACTGCTCAGCCTAGTCTTAATCTTATTCACCAGAGGCTTCAGCAGCTTAGAACTCCTCATGCCTTTCTCTCCCCTTCCCTCCCTTCTCCTTCTAAGGTATTCAACCTTTTTAATTTTGAATTTGAGTTTTCTTCTGGAAAATATAACGAGTTAAAAAAAATTATAAAAAATCTTGATTTTTCGATATTTCTAGGAGTATTTTAGATGATAGTGACATTTTAAGCTTAATTTTACTTCATTTTTAGCTTAATTTTACTTCATTTTTCTCTCTACAAGAAACTTAAAGATGAGAGTAAGAACGAGAAAGAAGACGAAGCTTCACTAGGAGAGGAGATAACGACGGTGACAAGGGATATGGTAGAAGAGAAGCCACAGATTGATCTAAACGAGTTTCTACAACAGCTTGGGATTATCAAGGAAGAAGAAGTGGAGAAGCCAGTGATTGAATCAGAAGGAGAGGAAGAAATCAGTAACAATAAGGAAGCAGAATCGAATAATTGTTTGAAAGACGATCACAGTGATGAAGTTGAAGTGGTCAGGGACAAAAGCTTTAATTGGGATTCACTCATGGAAATACATCCAAATATTGAGCATCATCACTTTGGAAACTTTCAAGTTTATGATCGTTATGAAGATGATCTAAGTTTTTGGGACTTTGAAGAACACCCTTCCATGACAATCATACCTTAAAAATAATTTAACTTTATTTCATGTTTTTTTTTCGTTCTTGCATGAATTATGTGCTTCGATCCACATAGGTGGAAGTACAAGTTCAAGGATTTTTTGTTTTTGTTTTTGTTTTTTTTGAAGGGTTGTATACCTTAGTAAAAATAGTGACAACGGAA

mRNA sequence

ATCTCTCCGCTCTCCAAAATGGAAACTTGCAGAGACAAAAAAGTCCATTCTTCCCCACTCGTAAAGCCATGGAAGAAAGGCCCTTCACGAGGCAAAGGCGGCCCTCAGAACGCCTCCTGCGAGTACCGCGGCGTCCGGCAGCGCACTTGGGGCAAGTGGGTGGCAGAGATCCGGGAGCCCAAGAAGCGCACCAGGCTCTGGCTTGGTTCTTTTGCCACTGCTGAAGAAGCCGCCATGGCTTATGATCAAGCTGCCACTAAGCTCTATGGCCCTGATGCTTATCTTAATCTTCCCCATTTGCTTCATAATCTTCCTCGTAATGACATTAATAATGGTTCTAAATCTAATTTCCTCAAATGGGTTCCTTCTAAAAACTTCGTTTCTATGTTCTCTCATCCCCGCCCTGCAGCAACCTTTATGCTTAATCTCACTGCTCAGCCTAGTCTTAATCTTATTCACCAGAGGCTTCAGCAGCTTAGAACTCCTCATGCCTTTCTCTCCCCTTCCCTCCCTTCTCCTTCTAAGAAACTTAAAGATGAGAGTAAGAACGAGAAAGAAGACGAAGCTTCACTAGGAGAGGAGATAACGACGGTGACAAGGGATATGGTAGAAGAGAAGCCACAGATTGATCTAAACGAGTTTCTACAACAGCTTGGGATTATCAAGGAAGAAGAAGTGGAGAAGCCAGTGATTGAATCAGAAGGAGAGGAAGAAATCAGTAACAATAAGGAAGCAGAATCGAATAATTGTTTGAAAGACGATCACAGTGATGAAGTTGAAGTGGTCAGGGACAAAAGCTTTAATTGGGATTCACTCATGGAAATACATCCAAATATTGAGCATCATCACTTTGGAAACTTTCAAGTTTATGATCGTTATGAAGATGATCTAAGTTTTTGGGACTTTGAAGAACACCCTTCCATGACAATCATACCTTAAAAATAATTTAACTTTATTTCATGTTTTTTTTTCGTTCTTGCATGAATTATGTGCTTCGATCCACATAGGTGGAAGTACAAGTTCAAGGATTTTTTGTTTTTGTTTTTGTTTTTTTTGAAGGGTTGTATACCTTAGTAAAAATAGTGACAACGGAA

Coding sequence (CDS)

ATGGAAACTTGCAGAGACAAAAAAGTCCATTCTTCCCCACTCGTAAAGCCATGGAAGAAAGGCCCTTCACGAGGCAAAGGCGGCCCTCAGAACGCCTCCTGCGAGTACCGCGGCGTCCGGCAGCGCACTTGGGGCAAGTGGGTGGCAGAGATCCGGGAGCCCAAGAAGCGCACCAGGCTCTGGCTTGGTTCTTTTGCCACTGCTGAAGAAGCCGCCATGGCTTATGATCAAGCTGCCACTAAGCTCTATGGCCCTGATGCTTATCTTAATCTTCCCCATTTGCTTCATAATCTTCCTCGTAATGACATTAATAATGGTTCTAAATCTAATTTCCTCAAATGGGTTCCTTCTAAAAACTTCGTTTCTATGTTCTCTCATCCCCGCCCTGCAGCAACCTTTATGCTTAATCTCACTGCTCAGCCTAGTCTTAATCTTATTCACCAGAGGCTTCAGCAGCTTAGAACTCCTCATGCCTTTCTCTCCCCTTCCCTCCCTTCTCCTTCTAAGAAACTTAAAGATGAGAGTAAGAACGAGAAAGAAGACGAAGCTTCACTAGGAGAGGAGATAACGACGGTGACAAGGGATATGGTAGAAGAGAAGCCACAGATTGATCTAAACGAGTTTCTACAACAGCTTGGGATTATCAAGGAAGAAGAAGTGGAGAAGCCAGTGATTGAATCAGAAGGAGAGGAAGAAATCAGTAACAATAAGGAAGCAGAATCGAATAATTGTTTGAAAGACGATCACAGTGATGAAGTTGAAGTGGTCAGGGACAAAAGCTTTAATTGGGATTCACTCATGGAAATACATCCAAATATTGAGCATCATCACTTTGGAAACTTTCAAGTTTATGATCGTTATGAAGATGATCTAAGTTTTTGGGACTTTGAAGAACACCCTTCCATGACAATCATACCTTAA

Protein sequence

METCRDKKVHSSPLVKPWKKGPSRGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRTRLWLGSFATAEEAAMAYDQAATKLYGPDAYLNLPHLLHNLPRNDINNGSKSNFLKWVPSKNFVSMFSHPRPAATFMLNLTAQPSLNLIHQRLQQLRTPHAFLSPSLPSPSKKLKDESKNEKEDEASLGEEITTVTRDMVEEKPQIDLNEFLQQLGIIKEEEVEKPVIESEGEEEISNNKEAESNNCLKDDHSDEVEVVRDKSFNWDSLMEIHPNIEHHHFGNFQVYDRYEDDLSFWDFEEHPSMTIIP

Homology

[Close]

BLAST of CmoCh14G004520 vs. ExPASy Swiss-Prot
Match: Q9SVX5 (Dehydration-responsive element-binding protein 2F OS=Arabidopsis thaliana OX=3702 GN=DREB2F PE=1 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 1.4e-58
Identity = 143/295 (48.47%), Postives = 184/295 (62.37%), Query Frame = 0


Query: 9   VHSSPLVKPWKKGPSRGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRTRLWLGSFATA 68
           +  S  +K WKKGP+RGKGGPQNA C+YRGVRQRTWGKWVAEIREPKKR RLWLGSFATA
Sbjct: 1   MEKSSSMKQWKKGPARGKGGPQNALCQYRGVRQRTWGKWVAEIREPKKRARLWLGSFATA 60

Query: 69  EEAAMAYDQAATKLYGPDAYLNLPHLLHNLPRNDINNGSKSNFLKWVPSKNFVSMFSHPR 128
           EEAAMAYD+AA KLYG DAYLNLPH    L RN   + S S   KWVPS+ F+SMF    
Sbjct: 61  EEAAMAYDEAALKLYGHDAYLNLPH----LQRNTRPSLSNSQRFKWVPSRKFISMF---- 120

Query: 129 PAATFMLNLTAQPSLNLIHQRLQQLRTPHAFLSPSLPSPSKKLKDESKNEKEDEASLGEE 188
             +  MLN+ AQPS+++I QRL++L+     LS S  S S   + ++     DE +   E
Sbjct: 121 -PSCGMLNVNAQPSVHIIQQRLEELKKT-GLLSQSYSSSSSSTESKTNTSFLDEKTSKGE 180

Query: 189 ITTVTRDMVEEKPQIDLNEFLQQLGIIKEEEVEKPVIESEGEEEISNNKEAESNNCLKDD 248
              +     ++KP+IDL EFLQQLGI+K+E   +P   +E       N++ E+ +     
Sbjct: 181 TDNMFEGGDQKKPEIDLTEFLQQLGILKDENEAEPSEVAECHSPPPWNEQEETGS----- 240

Query: 249 HSDEVEVVRDKSFNWDSLMEIHPNIE----HHHFGNFQVYDRYEDDLSF---WDF 297
                   R ++F+WD+L+E+ P  E         NF  YD +EDD+SF   WD+
Sbjct: 241 ------PFRTENFSWDTLIEM-PRSETTTMQFDSSNFGSYD-FEDDVSFPSIWDY 272

[Close]

BLAST of CmoCh14G004520 vs. ExPASy Swiss-Prot
Match: Q10R18 (Dehydration-responsive element-binding protein 2E OS=Oryza sativa subsp. japonica OX=39947 GN=DREB2E PE=2 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.3e-40
Identity = 124/315 (39.37%), Postives = 163/315 (51.75%), Query Frame = 0


Query: 16  KPWKKGPSRGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRTRLWLGSFATAEEAAMAY 75
           + WKKGP+RGKGGPQNA+CEYRGVRQRTWGKWVAEIREP KRTRLWLGSFATAEEAA+AY
Sbjct: 8   RAWKKGPTRGKGGPQNAACEYRGVRQRTWGKWVAEIREPNKRTRLWLGSFATAEEAALAY 67

Query: 76  DQAATKLYGPDAYLNLPHLLHNLPRNDINNGSKSNFLKWVPSKNFVSMFSHPRPA--ATF 135
           D+AA +LYGPDA+LNLPHL         +  +    L+W+P+    +       A  A  
Sbjct: 68  DEAARRLYGPDAFLNLPHL------RAASAAAAHQRLRWLPASAAAAAARGGAAAVPAYG 127

Query: 136 MLNLTAQPSLNLIHQRLQQL------------RTPHAFLSPSLPSPSKKLKDESKN---- 195
           +LNL AQ ++++IHQRLQ+L            RTP     P  P P+        N    
Sbjct: 128 LLNLNAQHNVHVIHQRLQELKNSSSSPTKPPPRTPTRANPPPPPLPTSSPCSTVTNSVGS 187

Query: 196 -------------EKEDEASLGEEITTVTRDMV-----EEKPQIDLNEFLQQLGIIKEEE 255
                        E+   A+   E      D        +KPQ+DL EFLQQ+G++K ++
Sbjct: 188 AALPPPMSCFQALEQAMAATAAMESAPCDDDAAVVGFGADKPQLDLKEFLQQIGVLKADD 247

Query: 256 VEKPVIESEGEEEISNNKEAESNNCLKDDHSDEVEVVRDKSFNWDSLMEIHPNIEHHH-- 289
                  + G+    +  + E  +      S E        F+WD+L     +I   H  
Sbjct: 248 -----DGATGKNGAVHGDDGELADAFGFGGSGE--------FDWDALAADMSDIAGGHGG 303

[Close]

BLAST of CmoCh14G004520 vs. ExPASy Swiss-Prot
Match: Q9LQZ2 (Dehydration-responsive element-binding protein 2D OS=Arabidopsis thaliana OX=3702 GN=DREB2D PE=2 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 5.8e-28
Identity = 61/101 (60.40%), Postives = 74/101 (73.27%), Query Frame = 0


Query: 19  KKGPSRGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRTRLWLGSFATAEEAAMAYDQA 78
           +KG  RGKGGP NASC Y+GVRQRTWGKWVAEIREP +  RLWLG+F T+ EAA+AYD A
Sbjct: 25  RKGCMRGKGGPDNASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSREAALAYDSA 84

Query: 79  ATKLYGPDAYLNLPHLLHNLPRNDINNGSKSNFLKWVPSKN 120
           A KLYGP+A+LNLP  L + P+   +  S++      PS N
Sbjct: 85  ARKLYGPEAHLNLPESLRSYPKTASSPASQT-----TPSSN 120

[Close]

BLAST of CmoCh14G004520 vs. ExPASy Swiss-Prot
Match: P61827 (Dehydration-responsive element-binding protein 2G OS=Arabidopsis thaliana OX=3702 GN=DREB2G PE=1 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 3.5e-25
Identity = 54/75 (72.00%), Postives = 64/75 (85.33%), Query Frame = 0


Query: 19 KKGPSRGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRTRLWLGSFATAEEAAMAYDQA 78
          +KG  +GKGGP+NA+C +RGVRQRTWGKWVAEIREP + TRLWLG+F T+ EAAMAYD+A
Sbjct: 17 RKGCMKGKGGPENATCTFRGVRQRTWGKWVAEIREPNRGTRLWLGTFNTSVEAAMAYDEA 76

Query: 79 ATKLYGPDAYLNLPH 94
          A KLYG +A LNL H
Sbjct: 77 AKKLYGHEAKLNLVH 91

[Close]

BLAST of CmoCh14G004520 vs. ExPASy Swiss-Prot
Match: O82132 (Dehydration-responsive element-binding protein 2A OS=Arabidopsis thaliana OX=3702 GN=DREB2A PE=1 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 2.5e-23
Identity = 50/74 (67.57%), Postives = 60/74 (81.08%), Query Frame = 0


Query: 19  KKGPSRGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRTRLWLGSFATAEEAAMAYDQA 78
           KKG  +GKGGP+N+ C +RGVRQR WGKWVAEIREP + +RLWLG+F TA+EAA AYD+A
Sbjct: 62  KKGCMKGKGGPENSRCSFRGVRQRIWGKWVAEIREPNRGSRLWLGTFPTAQEAASAYDEA 121

Query: 79  ATKLYGPDAYLNLP 93
           A  +YGP A LN P
Sbjct: 122 AKAMYGPLARLNFP 135

[Close]

BLAST of CmoCh14G004520 vs. ExPASy TrEMBL
Match: A0A6J1J4K5 (dehydration-responsive element-binding protein 2F OS=Cucurbita maxima OX=3661 GN=LOC111481704 PE=4 SV=1)

HSP 1 Score: 544.3 bits (1401), Expect = 3.3e-151
Identity = 278/310 (89.68%), Postives = 288/310 (92.90%), Query Frame = 0


Query: 1   METCRDKKVHSSPLVKPWKKGPSRGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRTRL 60
           METCRDKKVHSSPLVKPWKKGPSRGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRTRL
Sbjct: 1   METCRDKKVHSSPLVKPWKKGPSRGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRTRL 60

Query: 61  WLGSFATAEEAAMAYDQAATKLYGPDAYLNLPHLLHNLPRNDINNGSKSNFLKWVPSKNF 120
           WLGSFATAEEAAMAYDQAATKLYGPDAYLNLPHLLHNLPRNDINNGS SNFLKWVPSKNF
Sbjct: 61  WLGSFATAEEAAMAYDQAATKLYGPDAYLNLPHLLHNLPRNDINNGSISNFLKWVPSKNF 120

Query: 121 VSMFSHPRPAATFMLNLTAQPSLNLIHQRLQQLRTPHAFLSPSLPSPSKKLKDESKNEKE 180
           VS+F +PRP ATFMLNL AQPSLNLIHQRLQQLRT H FLSPSLPSPSKKL+DE+KN KE
Sbjct: 121 VSLFPNPRP-ATFMLNLNAQPSLNLIHQRLQQLRT-HGFLSPSLPSPSKKLEDENKNGKE 180

Query: 181 DEASLGEEITTVTRDMVEEKPQIDLNEFLQQLGIIKEEEVEKPVIESEGEEEISNNKEAE 240
           DEASLGEE TTVT DMVE+KPQIDLNEFLQQLGIIKEE  EK VIESEGEE I+NNKEAE
Sbjct: 181 DEASLGEETTTVTMDMVEDKPQIDLNEFLQQLGIIKEEVEEKSVIESEGEEGINNNKEAE 240

Query: 241 SNNCLKDDHSDEVEVVRDKSFNWDSLMEIHPNIEHHHFGNFQVYDRYEDDLSF----WDF 300
            NNCLKDD SDEVEVV D+SFNWDS+ME+H NIEHHHFGNFQVY+RYEDDLSF    WDF
Sbjct: 241 LNNCLKDDPSDEVEVVSDESFNWDSIMEMHQNIEHHHFGNFQVYNRYEDDLSFSNSIWDF 300

Query: 301 EEHPSMTIIP 307
           EEH SMTIIP
Sbjct: 301 EEHHSMTIIP 308

[Close]

BLAST of CmoCh14G004520 vs. ExPASy TrEMBL
Match: A0A5D3DQ97 (Dehydration-responsive element-binding protein 2F OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005850 PE=4 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 1.7e-102
Identity = 221/335 (65.97%), Postives = 251/335 (74.93%), Query Frame = 0


Query: 1   METCRD-KKVHSSPL-VKPWKKGPSRGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRT 60
           ME  RD KK H+SP   KPWKKGPSRGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRT
Sbjct: 1   MENGRDNKKPHTSPFHHKPWKKGPSRGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRT 60

Query: 61  RLWLGSFATAEEAAMAYDQAATKLYGPDAYLNLPHLLHNLPRNDINNGSKSNFLKWVPSK 120
           RLWLGSF+TAEEAAMAYDQAATKLYGP AYLNLPHL ++   N+ ++  KSN LKWVPSK
Sbjct: 61  RLWLGSFSTAEEAAMAYDQAATKLYGPHAYLNLPHLANH---NNDSSDYKSNLLKWVPSK 120

Query: 121 NFVSMFSHPRPAATFMLNLTAQPSLNLIHQRLQQLRTPHAFLSP-SLPSPSKKLKDESKN 180
           NF+S+F H   AA  +    +  SL+LIHQRLQQL+ PH+FLS  SL SPSKKL+D+ + 
Sbjct: 121 NFISLFPHTNRAAAAVATTGSFMSLHLIHQRLQQLKPPHSFLSSNSLSSPSKKLEDKGEK 180

Query: 181 EKEDEASLGEEI---TTVTRDM-VEEKPQIDLNEFLQQLGIIKEEEVEKPVIESEGEEEI 240
           EK++EAS+ EE    TT TR +  EEKPQIDLNEFLQQLGI+KEEE EK  IE EGE+  
Sbjct: 181 EKDEEASVREETTTKTTATRSVEEEEKPQIDLNEFLQQLGILKEEEDEKLEIELEGEKGN 240

Query: 241 SNNKEAE---------------SNNCLKDDHSDEVEVVRDKSFNWDSLMEIHPNIEHHHF 300
            NNK+ +               SNNC   D+SDEVEV+ DKSFNWDS+MEIHPNIE +HF
Sbjct: 241 DNNKDKDNDNDDRGCCLGSSEVSNNC---DYSDEVEVLSDKSFNWDSIMEIHPNIEDNHF 300

Query: 301 GNFQVYD----RYEDDLSF----WDFEEHPSMTII 306
           GNFQ+YD     YEDDLSF    WDFEE  S  II
Sbjct: 301 GNFQLYDHHFLNYEDDLSFPNSIWDFEEDHSTRII 329

[Close]

BLAST of CmoCh14G004520 vs. ExPASy TrEMBL
Match: A0A1S3B811 (dehydration-responsive element-binding protein 2F OS=Cucumis melo OX=3656 GN=LOC103486810 PE=4 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 1.7e-102
Identity = 221/335 (65.97%), Postives = 251/335 (74.93%), Query Frame = 0


Query: 1   METCRD-KKVHSSPL-VKPWKKGPSRGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRT 60
           ME  RD KK H+SP   KPWKKGPSRGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRT
Sbjct: 1   MENGRDNKKPHTSPFHHKPWKKGPSRGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRT 60

Query: 61  RLWLGSFATAEEAAMAYDQAATKLYGPDAYLNLPHLLHNLPRNDINNGSKSNFLKWVPSK 120
           RLWLGSF+TAEEAAMAYDQAATKLYGP AYLNLPHL ++   N+ ++  KSN LKWVPSK
Sbjct: 61  RLWLGSFSTAEEAAMAYDQAATKLYGPHAYLNLPHLANH---NNDSSDYKSNLLKWVPSK 120

Query: 121 NFVSMFSHPRPAATFMLNLTAQPSLNLIHQRLQQLRTPHAFLSP-SLPSPSKKLKDESKN 180
           NF+S+F H   AA  +    +  SL+LIHQRLQQL+ PH+FLS  SL SPSKKL+D+ + 
Sbjct: 121 NFISLFPHTNRAAAAVATTGSFMSLHLIHQRLQQLKPPHSFLSSNSLSSPSKKLEDKGEK 180

Query: 181 EKEDEASLGEEI---TTVTRDM-VEEKPQIDLNEFLQQLGIIKEEEVEKPVIESEGEEEI 240
           EK++EAS+ EE    TT TR +  EEKPQIDLNEFLQQLGI+KEEE EK  IE EGE+  
Sbjct: 181 EKDEEASVREETTTKTTATRSVEEEEKPQIDLNEFLQQLGILKEEEDEKLEIELEGEKGN 240

Query: 241 SNNKEAE---------------SNNCLKDDHSDEVEVVRDKSFNWDSLMEIHPNIEHHHF 300
            NNK+ +               SNNC   D+SDEVEV+ DKSFNWDS+MEIHPNIE +HF
Sbjct: 241 DNNKDKDNDNDDRGCCLGSSEVSNNC---DYSDEVEVLSDKSFNWDSIMEIHPNIEDNHF 300

Query: 301 GNFQVYD----RYEDDLSF----WDFEEHPSMTII 306
           GNFQ+YD     YEDDLSF    WDFEE  S  II
Sbjct: 301 GNFQLYDHHFLNYEDDLSFPNSIWDFEEDHSTRII 329

[Close]

BLAST of CmoCh14G004520 vs. ExPASy TrEMBL
Match: A0A6J1I3D8 (dehydration-responsive element-binding protein 2F-like OS=Cucurbita maxima OX=3661 GN=LOC111470171 PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 5.0e-99
Identity = 215/323 (66.56%), Postives = 242/323 (74.92%), Query Frame = 0


Query: 5   RDKKVHSSPLVKPWKKGPSRGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRTRLWLGS 64
           RDKK H SPL+KPWKKGPSRGKGGP NASCEYRGVRQRTWGKWVAEIREPKKRTRLWLGS
Sbjct: 6   RDKKSH-SPLLKPWKKGPSRGKGGPLNASCEYRGVRQRTWGKWVAEIREPKKRTRLWLGS 65

Query: 65  FATAEEAAMAYDQAATKLYGPDAYLNLPHLLHNLPRNDINNGSKSNFLKWVPSKNFVSMF 124
           FATAEEAAMAYDQAAT+LYGPDAYLNLPHL  N      ++ +KSN  KWVPSKNF+SMF
Sbjct: 66  FATAEEAAMAYDQAATRLYGPDAYLNLPHLQPN------SSAAKSNIFKWVPSKNFISMF 125

Query: 125 SHPRPAATFMLNLTAQPSLNLIHQRLQQLRTPHAFLSPSLPSPSKKLKD--ESKNEKEDE 184
            H RPA  FMLNL AQPS++LIHQRLQQL+T   FL     SPSKK++D  E++ EK+DE
Sbjct: 126 PHHRPAG-FMLNLNAQPSVHLIHQRLQQLQTSRGFL-----SPSKKVEDKRETEGEKDDE 185

Query: 185 ASLGEE----ITTVTRDMVEEKPQIDLNEFLQQLGIIKEEEVEKPVIESEGEEEISN--N 244
           A + ++     TT T   VEEKPQIDLNEFLQQLGI+K EE EK +  SEGEE       
Sbjct: 186 APVEDKEVTTTTTATIRAVEEKPQIDLNEFLQQLGIMKGEE-EKVIESSEGEEGNGGCFL 245

Query: 245 KEAESNNCLKDDHSDEVEVVRDKSFNWDSLMEIHPNIE------HHHFGNFQVYD---RY 304
               SNN LKD +SDE+EV+ DKSFNWDS+M++H NIE      HH  GNF+VYD    Y
Sbjct: 246 GSESSNNNLKDHYSDELEVLSDKSFNWDSIMDVHANIEDLHHHHHHQIGNFEVYDYVHNY 305

Query: 305 EDDLSF----WDFEEHPSMTIIP 307
           EDDLSF    WDF+E  S  IIP
Sbjct: 306 EDDLSFPNSIWDFQEDHSTGIIP 314

[Close]

BLAST of CmoCh14G004520 vs. ExPASy TrEMBL
Match: A0A0A0LBF0 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G812170 PE=4 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 6.6e-99
Identity = 218/339 (64.31%), Postives = 249/339 (73.45%), Query Frame = 0


Query: 1   METCRD-KKVHSSPL-VKPWKKGPSRGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRT 60
           ME  RD KK H+SP   KPWKKGPSRGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRT
Sbjct: 1   MENGRDNKKPHTSPFHHKPWKKGPSRGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRT 60

Query: 61  RLWLGSFATAEEAAMAYDQAATKLYGPDAYLNLPHLLHNLPRNDINNGSKSNFLKWVPSK 120
           RLWLGSF+TAEEAAMAYDQAATKLYGP AYLNLPHL +   +N+ ++  KSNF+KWVPSK
Sbjct: 61  RLWLGSFSTAEEAAMAYDQAATKLYGPHAYLNLPHLAN---QNNDSSDYKSNFVKWVPSK 120

Query: 121 NFVSMFSHPRPAATFMLNLTAQPSLNLIHQRLQQLRTPHAFLSP-SLPSPSKKLKD--ES 180
           NF+S+F H   AA  +    +  SL+LIHQRLQQL+ PH FLS  SL SPSKKL+D  E 
Sbjct: 121 NFISLFPHTNRAAATVATTGSFMSLHLIHQRLQQLKPPHPFLSSNSLTSPSKKLEDKGEK 180

Query: 181 KNEKEDEASLGEEITTVT----RDMVEEKPQIDLNEFLQQLGIIKEEEVEKPVIESEGEE 240
           + +K++EAS+ EE TT T        EEKPQIDLNEFLQQLGI+KEEE EK VIE E E+
Sbjct: 181 EKDKDEEASVREETTTKTTATSSGKEEEKPQIDLNEFLQQLGILKEEE-EKLVIELEEEK 240

Query: 241 EISNNKEAE-----------------SNNCLKDDHSDEVEVVRDKSFNWDSLMEIHPNIE 300
             +NNK+ +                 SNNC   D+SDEVEV+ DKSFNWDS+MEIHPNIE
Sbjct: 241 GNNNNKDNDIDNYNDDGGCCLGSSEISNNC---DYSDEVEVLSDKSFNWDSIMEIHPNIE 300

Query: 301 HHHFGNFQVYD----RYEDDLSF----WDFEEHPSMTII 306
            +HFGNFQ+YD     YED+L F    WDFEE  S  II
Sbjct: 301 DNHFGNFQLYDHHFLNYEDELGFPNSIWDFEEDHSTRII 332

[Close]

BLAST of CmoCh14G004520 vs. TAIR 10
Match: AT3G57600.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 228.0 bits (580), Expect = 1.0e-59
Identity = 143/295 (48.47%), Postives = 184/295 (62.37%), Query Frame = 0


Query: 9   VHSSPLVKPWKKGPSRGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRTRLWLGSFATA 68
           +  S  +K WKKGP+RGKGGPQNA C+YRGVRQRTWGKWVAEIREPKKR RLWLGSFATA
Sbjct: 1   MEKSSSMKQWKKGPARGKGGPQNALCQYRGVRQRTWGKWVAEIREPKKRARLWLGSFATA 60

Query: 69  EEAAMAYDQAATKLYGPDAYLNLPHLLHNLPRNDINNGSKSNFLKWVPSKNFVSMFSHPR 128
           EEAAMAYD+AA KLYG DAYLNLPH    L RN   + S S   KWVPS+ F+SMF    
Sbjct: 61  EEAAMAYDEAALKLYGHDAYLNLPH----LQRNTRPSLSNSQRFKWVPSRKFISMF---- 120

Query: 129 PAATFMLNLTAQPSLNLIHQRLQQLRTPHAFLSPSLPSPSKKLKDESKNEKEDEASLGEE 188
             +  MLN+ AQPS+++I QRL++L+     LS S  S S   + ++     DE +   E
Sbjct: 121 -PSCGMLNVNAQPSVHIIQQRLEELKKT-GLLSQSYSSSSSSTESKTNTSFLDEKTSKGE 180

Query: 189 ITTVTRDMVEEKPQIDLNEFLQQLGIIKEEEVEKPVIESEGEEEISNNKEAESNNCLKDD 248
              +     ++KP+IDL EFLQQLGI+K+E   +P   +E       N++ E+ +     
Sbjct: 181 TDNMFEGGDQKKPEIDLTEFLQQLGILKDENEAEPSEVAECHSPPPWNEQEETGS----- 240

Query: 249 HSDEVEVVRDKSFNWDSLMEIHPNIE----HHHFGNFQVYDRYEDDLSF---WDF 297
                   R ++F+WD+L+E+ P  E         NF  YD +EDD+SF   WD+
Sbjct: 241 ------PFRTENFSWDTLIEM-PRSETTTMQFDSSNFGSYD-FEDDVSFPSIWDY 272

[Close]

BLAST of CmoCh14G004520 vs. TAIR 10
Match: AT1G75490.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 126.3 bits (316), Expect = 4.1e-29
Identity = 61/101 (60.40%), Postives = 74/101 (73.27%), Query Frame = 0


Query: 19  KKGPSRGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRTRLWLGSFATAEEAAMAYDQA 78
           +KG  RGKGGP NASC Y+GVRQRTWGKWVAEIREP +  RLWLG+F T+ EAA+AYD A
Sbjct: 25  RKGCMRGKGGPDNASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSREAALAYDSA 84

Query: 79  ATKLYGPDAYLNLPHLLHNLPRNDINNGSKSNFLKWVPSKN 120
           A KLYGP+A+LNLP  L + P+   +  S++      PS N
Sbjct: 85  ARKLYGPEAHLNLPESLRSYPKTASSPASQT-----TPSSN 120

[Close]

BLAST of CmoCh14G004520 vs. TAIR 10
Match: AT5G18450.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 117.1 bits (292), Expect = 2.5e-26
Identity = 54/75 (72.00%), Postives = 64/75 (85.33%), Query Frame = 0


Query: 19 KKGPSRGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRTRLWLGSFATAEEAAMAYDQA 78
          +KG  +GKGGP+NA+C +RGVRQRTWGKWVAEIREP + TRLWLG+F T+ EAAMAYD+A
Sbjct: 17 RKGCMKGKGGPENATCTFRGVRQRTWGKWVAEIREPNRGTRLWLGTFNTSVEAAMAYDEA 76

Query: 79 ATKLYGPDAYLNLPH 94
          A KLYG +A LNL H
Sbjct: 77 AKKLYGHEAKLNLVH 91

[Close]

BLAST of CmoCh14G004520 vs. TAIR 10
Match: AT5G05410.1 (DRE-binding protein 2A )

HSP 1 Score: 110.9 bits (276), Expect = 1.8e-24
Identity = 50/74 (67.57%), Postives = 60/74 (81.08%), Query Frame = 0


Query: 19  KKGPSRGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRTRLWLGSFATAEEAAMAYDQA 78
           KKG  +GKGGP+N+ C +RGVRQR WGKWVAEIREP + +RLWLG+F TA+EAA AYD+A
Sbjct: 62  KKGCMKGKGGPENSRCSFRGVRQRIWGKWVAEIREPNRGSRLWLGTFPTAQEAASAYDEA 121

Query: 79  ATKLYGPDAYLNLP 93
           A  +YGP A LN P
Sbjct: 122 AKAMYGPLARLNFP 135

[Close]

BLAST of CmoCh14G004520 vs. TAIR 10
Match: AT5G05410.2 (DRE-binding protein 2A )

HSP 1 Score: 110.9 bits (276), Expect = 1.8e-24
Identity = 50/74 (67.57%), Postives = 60/74 (81.08%), Query Frame = 0


Query: 19  KKGPSRGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRTRLWLGSFATAEEAAMAYDQA 78
           KKG  +GKGGP+N+ C +RGVRQR WGKWVAEIREP + +RLWLG+F TA+EAA AYD+A
Sbjct: 62  KKGCMKGKGGPENSRCSFRGVRQRIWGKWVAEIREPNRGSRLWLGTFPTAQEAASAYDEA 121

Query: 79  ATKLYGPDAYLNLP 93
           A  +YGP A LN P
Sbjct: 122 AKAMYGPLARLNFP 135

The following BLAST results are available for this feature:

BLAST of CmoCh14G004520 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SVX5	1.4e-58	48.47	Dehydration-responsive element-binding protein 2F OS=Arabidopsis thaliana OX=370...	[more]
Q10R18	1.3e-40	39.37	Dehydration-responsive element-binding protein 2E OS=Oryza sativa subsp. japonic...	[more]
Q9LQZ2	5.8e-28	60.40	Dehydration-responsive element-binding protein 2D OS=Arabidopsis thaliana OX=370...	[more]
P61827	3.5e-25	72.00	Dehydration-responsive element-binding protein 2G OS=Arabidopsis thaliana OX=370...	[more]
O82132	2.5e-23	67.57	Dehydration-responsive element-binding protein 2A OS=Arabidopsis thaliana OX=370...	[more]

BLAST of CmoCh14G004520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J4K5	3.3e-151	89.68	dehydration-responsive element-binding protein 2F OS=Cucurbita maxima OX=3661 GN...	[more]
A0A5D3DQ97	1.7e-102	65.97	Dehydration-responsive element-binding protein 2F OS=Cucumis melo var. makuwa OX...	[more]
A0A1S3B811	1.7e-102	65.97	dehydration-responsive element-binding protein 2F OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A6J1I3D8	5.0e-99	66.56	dehydration-responsive element-binding protein 2F-like OS=Cucurbita maxima OX=36...	[more]
A0A0A0LBF0	6.6e-99	64.31	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G812170 PE=...	[more]

BLAST of CmoCh14G004520 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G57600.1	1.0e-59	48.47	Integrase-type DNA-binding superfamily protein	[more]
AT1G75490.1	4.1e-29	60.40	Integrase-type DNA-binding superfamily protein	[more]
AT5G18450.1	2.5e-26	72.00	Integrase-type DNA-binding superfamily protein	[more]
AT5G05410.1	1.8e-24	67.57	DRE-binding protein 2A	[more]
AT5G05410.2	1.8e-24	67.57	DRE-binding protein 2A	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 36..47 score: 72.58 coord: 58..74 score: 64.81
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 35..98 e-value: 1.2E-37 score: 141.0
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 34..84 e-value: 1.6E-14 score: 53.9
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 35..92 score: 22.800312
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 34..87 e-value: 1.43402E-29 score: 105.046
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 35..93 e-value: 2.9E-25 score: 90.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..187
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 169..187
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 222..250
None	No IPR available	PANTHER	PTHR31241	DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C	coord: 12..292
None	No IPR available	PANTHER	PTHR31241:SF2	DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2F	coord: 12..292
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 35..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh14G004520.1	CmoCh14G004520.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0000976	transcription cis-regulatory region binding
molecular_function	GO:0003677	DNA binding