CmoCh14G004320 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh14G004320
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	UBP1-associated protein 2C-like
Location	Cmo_Chr14: 2045609 .. 2051082 (+)
RNA-Seq Expression	CmoCh14G004320
Synteny	CmoCh14G004320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAGTACGTAATGAGTGTAGTAGCTTATTTGAGCATGCTTTATGTATGACCAATACGAGATGATGGTCTTTCTCTTCTACATCCAAGCTGGATCATCGTAGAATATAGACAAACCAACCAATAAATAGTTGTTTGTTCTCTCCTTTTGATTGATATTAGGTTGTTTCCAAGTTCAAACTATGAGATCGGTTGGAGAAGAGAACGAATCATTCTTTATAAGGGTATGGAAACTTCTCCTTAGTAATGAGACAAAATGGACTATAGCTATTAGCGGTGAACTTGAGCTGTTGCAAATGATACTAAAACTACACACTGGGTAGTGTGCCAACGGGATTGAATAGAAGTCGTTTATCTCGAGATCAATACCATTACTTTTTGAAGAAAAAAAAAAAAAAATCACACTTGTGATGAAGTAGCACATGGTTTAATTTTTTCTTACCTAATCAAAAGCTCACACTTTCTGGTTTTCTTTTTCCATCTTTGAATCTGAATCCTTTTTCGTCAAGAAACCATAACTACTACTTAAATTTTTACGTCATTTCCAGCTTGCATTGAGTAGAAGGCCGTATCGTTGAAGGTAACAAAAGGAGAATCAACGACTAGTTGCACACCGGGATAGCATATAACCCGAATAAGAAGAATCAACGACTAGTCGGATCCTGTGCTCTAAGATCCCAATCGGTTGGAGAGGGGAACGAAACATTCTTTACAAAGGGTGTGAAATTTAAAACCTTGAGGAGAAGTCTAAAAGCGGAAATCCAAAAAAGACAGTATCTACTAGCAGTGAGCTTGACCTATTACAAATGGTATCAGAGTTGCACGCCGAGAAGCGTGCCAATGAAAACGCTGGGTCCCTAAGGGAGGTGGATTGTGAGAGCTTCGCAAGCTAGACGGTGTGCCAGGTAGGACGCTGCCCCCAAGGATAGTGGATTGTGAGGGCTGTTACAAATATTACACCTAAAATACATTTTAGTCCTGACAGATATGATTTTGGTGATCGGTCGTACACTCTCGTATTAAAAATAGTAAATACCTATCTAAATAAAGAAGTTTGGAATAGAAATGTAAAAAAGAAGCCCTAAAGGCTGTGTTCGGTCCAGTTTGGAGCGCTGAACAAGGGCTCAGGTCTGCTATCACTTCAGCGCCAAACGTGTCTGATGACCATCACGAACATGGAGGATTTGAAGAAGAGGAAGCTGGAGGAGACCGTTGGCAACGGTGAATTTTCGTCGGTCGAACATTTGCGGTCTCTCCTCGAACCGCTTCCCAAGCCACAACTCGTCGATCTCCTTGCCAGACTGTGCGTCTCTTCTCCTTATTGATTAAACCACGCTTCCATTTGATCTTCTTTCTTCTTCTTGTTTGTCTTCATGAATTCTCGTAATGTTTTAGTTTATTAGTTCTTCTTCTTCTTTTTCTCACCTGGTTTTGTCTTTCTGTTTACTGCGAAACAATGTTATTGGATGAGATATGGAGTTTCAAAGAATTGGATAATCCGAGCCTTAACTCATTTATGCCTCTGTTGCCGATGTTCTGTTCTACGTTTTTGCGTTCTTAGTTTCCATTGTAGCTGAAGGTTGGGATCTTATTGTTTCGCAGATTATCATTGTATTTTTTTATAAAACACAATCTAAAGTTTAGTCAATTTAAAATTTATCTTTAATAAATTGCTTCTGCCAAAAAAAAAAAAAAAATGTTAAACTATCATGAAGGTTATTTCAAACCAAATTCAGATTTATCTTGGAGTATTTATCTAATACACTATTTAAAAAAGAAGACAAACTCACAAGTTCAAGAATTATAAAAAATGAATTTCAACTCAAAACAAATTTGTTCGAAATTTTTTTTTTGTCTTTATAGTTCTTGAATAGAAATTTTCTTTTGAAAGTAACTTCCATCACTAAGGACTATGGTAAGAATAAGATTTTTGGGTATTCCAATCAGAAGGGTGTTGCTTGAATTGTATGCTGTGTGATTGACATGGTGAATGTGTGTTTGTTTGCGTTGCATGTTGAGGCATAAAGAGGGTCCCAGTATCCTTCCATTGCAGAAGAAATAAAAAGTGTTGCCAGTGCAGATCCTGTCAATCGAAAGCTTTTTGTTCGTGGCTTGGCCTGGAATACCACTTCAGAAACATTGTGTGCTGTGAGTGCAGTTGGTCGTTGCTTGTGTTTTGCCTGTCATGCTTGTGATTGTTCTCTAGGATATATGTTCTTAGTCCTGGAACATTAAATTTTGGGATCACTTTCTTTTTTAATAATTTTTTCTCCTAGGCTTCTATATCCTACAAAAAGGTGTTCTGTTGGTTTTCTTCCTAACAAGTAGTTGTAATTATTTTCATGTTCAGACGTTTAGCGTCCATGGCGAAATTGAAGAAGGAGCCGTTATCTATGACAAAACGACAGGGAAGTCTCGTGGATATGGTTTCATTACTTACAAGCATATGGAGTCAACTAAAGCTGCTTTAAAAGCACCTAGCAAAATTATTGAGGTAATCACTTACCCCTTCCAGATGTTGTGGAAATATTTTCTATTTGATCAGATGATGTTTTGGAGTTAAATGTGTGTGAAAATAGTTGGGATGGGATGAATAAGTTAACGTTTCTTATTTGGGTTAGGAATACAATGGATTATAAATGATCTTCTCTAGAGTTTATAATTTTTTTTGTTTGCTTTTTTATTCGTTTCGTGAAATAGCACCCTGACCCCACATCTTGTATCCTCAATCGAGTTTCATTTCGACCCCATCTTCTTCATAAAATGATAATTGACGTCTCATTCACTGAGTTATGTTCAAATTGGCAAAACCGGTAGTCTCTTAGGAATACCTACCTAAATGTTGTGATGTGAATCTTTGGGTGAGTATAATAACAAAAATGTCGCGATGTCTCTAAAGACTAGGCCTTGGGGAAGACACAAACTCTTAGAAAAATACAATATTTGGTCTCATCATTTCTTTGTTCGTAGGACGATAGCTGTTGGCTTATGGAGAAGTATTCTTTTTGGATTTTGACCACAATATGTAATGAATCTAATTTTACAAAGATTGAAACTTAATCAACTCCTATATATGAGCTGTATATCCTACTTGTAATAATTTTGAACTTGAACAAAATTTATGCCCTTAAAAGCAGATATTAAGGGTTGTTGATTGACAAGCCTATCTGCAAGGTAAGGATAGATAACTTGAACTTGTAATAAACACAACCAGGTCTTCGTTCCACATATTATAGCTGGTGGCTTACTAAGATATTTCTAAGAGAACTCAAATATTTGTATTTGATACATTCTTCTTAGCTTACTAAGATATTTCTAAGAGAACTCAAATATTTGTATTTGATACATTCTTCTTAATTTAGGGTCGCATGGCTGTCTGCAATCTGGCTTGTGAGGGTCTAAGTGGATCAAGTACAACTCCAGATTTAGCACAGAGGAAGCTATACATTGGTGGGTTATCACCAGATATTACAAGTGAAATGTTGCTGAATTTCTTTGGAAGGTATGGTGATATAGAAGAAGGTTCGGTTGCCTATGATAAAGATACAAATGAATCACGGTTAGTAACATTCTTCTCGCATTTCATTGGGACATTACTTTCTCGGTCGATGTCTATGATTTTTTTATCTTATTGGACCCCACTGCACTGCAGCTATTATATAATTTTCATTTTTTTGTGTGTAGAGGGTTCGGATTTGTTACATATACCACAGTCGAGGCTACAAAGAAGGCAATAGATGATCCAGACAAGACCTTTGGGGTGAGTGACTAATGAGCCTTGATAATAGCCTTTTGAAATAGCCGGTTTAATTTTTAGCATTATAGAAGATTCCAATCATTTAAATCCTCAGATATGCTGTAATTTATGTTTCAAGCGACAAGAAAAAAGGGAAAAGGCCAGAAGTAAGGGTAGTCCTAAGGGTAAGATTATTGCTTCCGGAGTTCTTAAGGGTCCTTTATCTCCTTTCCTTTTCTTACTTGTGGTGGATGATTATTGTGAGCAAGTATAGTTCTCATCACTTTGACTGAATTTTTGGTGGGTTTAAAGGCACCTTCAGAACCCGTGGAAAGAAATTTCTAATAAGCTTTTTTTTTTCCTGATCTAATTTAGTGATGTGGTGGGTGATGGGTAGGGTACTCTGTTTTTGGAGGATAGATGGGTGGGGGATCGCCCCCTTTGCAATGTCTTTCCTAATTTTTATCATTTATCTGTTATGAAAAATTGTTTTGTCGTTGACGTTTTGATTCATGAGGGAGATCATTCTTTTTTTCGTTTGTTCGATAGAGAAACGATGGGGATTATGACTCTCCTTTCTTTAGTGGGAGACTTCAATTTTAGGCAGGGGAGAAAGGATTGTTCGACTATGGAGTCTTCATCCTTCGAAGGGTTTCTCGTGTAAGATCGTATTTTCTTTATCGAGTGGATCATTCTTCTTTTAGGGAGTTTGTGTTATCAATTTTTTGGAAGGTGAAAATTCCAGAAAAGGCGAAGTTCTTTGTCTGGAAGAATTAACACTTCAGACAAACTTTCGAGAAAGTTATCGACCTTGGTTGGGTCGTTCTATTGCATTCTTTTGCAAGCATTTCTATAATGTGGTGAGTGTTTGCAGGGAAGGAACATAATTGTGAAGCTCGCCGATTCACACAGGAACAAGATGATGCAGGCACAAGTACCCCCAGCTATTCCTTCTATGCCATACCCAGTAGCAGCAGCTGGATATCCTCAACCTGGAAAACCACACGGCGGTGTTGCCCCTGTTGGCTATGCATATCCCCCCCAAGCTCTTGCATCATATCATGCTTCATATCCTAGTCTGACGTCCGCGCATGCTTCGTATGCGAGCCAACCCCAAATTCCACATCCCCATCAAGTGATAGGAAAGAAAGACGCTCCCGGACTCCACCTGATCACGCCTACTGGAATGGGAGGCTATCCATATTATATGGCGAAACAATAGATGTGATTTATGGGAGGTGAATTTCAAAACATGATAATATGTTAGCTTTGATTCTCATTCAATGGTTCATGGTTCACTGGTTTTCTGCAGGGATTTGGACATTGGCAATGGCCCTCTTGAAATTGGGTAATCTCTTCATCCTTGTGTAGCTTGTTGGAGTAATATTATTAGCATCGAGAAATAATGCATACTTATTCTTAGGATTAGAAGCAGTTGGTTCTGAGCATGAAACATATTGAACATATGACAGACAGAGTATTCTTGATCTTTCTGAATTGCATTTTACTCTCATTTCCTGTTTTGAATTTAGAAAACGGATCTCATAGTTACTGTAAGTATTAGATTAGATTAGATTAGATTATTTGTGTTCCATTAACAATTTTCTTCAAAGAAGTTCTTCCAAATTTTCTGTAATTGTTTAGGTTTTAGGTTTAAATATCATTTTCCTCTCGTTTTAATTTGTCTCTGTAATTTTAAATCTTTAGATTGAACTACTTTAGTTGAACTTTATCCACG

mRNA sequence

ATGCAATTTGGAGCGCTGAACAAGGGCTCAGGTCTGCTATCACTTCAGCGCCAAACGTGTCTGATGACCATCACGAACATGGAGGATTTGAAGAAGAGGAAGCTGGAGGAGACCGTTGGCAACGGTGAATTTTCGTCGGTCGAACATTTGCGGTCTCTCCTCGAACCGCTTCCCAAGCCACAACTCGTCGATCTCCTTGCCAGACTAGGGTCCCAGTATCCTTCCATTGCAGAAGAAATAAAAAGTGTTGCCAGTGCAGATCCTGTCAATCGAAAGCTTTTTGTTCGTGGCTTGGCCTGGAATACCACTTCAGAAACATTGTGTGCTACGTTTAGCGTCCATGGCGAAATTGAAGAAGGAGCCGTTATCTATGACAAAACGACAGGGAAGTCTCGTGGATATGGTTTCATTACTTACAAGCATATGGAGTCAACTAAAGCTGCTTTAAAAGCACCTAGCAAAATTATTGAGGGTCGCATGGCTGTCTGCAATCTGGCTTGTGAGGGTCTAAGTGGATCAAGTACAACTCCAGATTTAGCACAGAGGAAGCTATACATTGGTGGGTTATCACCAGATATTACAAGTGAAATGTTGCTGAATTTCTTTGGAAGGTATGGTGATATAGAAGAAGGTTCGGTTGCCTATGATAAAGATACAAATGAATCACGAGGGTTCGGATTTGTTACATATACCACAGTCGAGGCTACAAAGAAGGCAATAGATGATCCAGACAAGACCTTTGGGGGAAGGAACATAATTGTGAAGCTCGCCGATTCACACAGGAACAAGATGATGCAGGCACAAGTACCCCCAGCTATTCCTTCTATGCCATACCCAGTAGCAGCAGCTGGATATCCTCAACCTGGAAAACCACACGGCGGTGTTGCCCCTGTTGGCTATGCATATCCCCCCCAAGCTCTTGCATCATATCATGCTTCATATCCTAGTCTGACGAAAGAAAGACGCTCCCGGACTCCACCTGATCACGCCTACTGGAATGGGAGGCTATCCATATTATATGGCGAAACAATAGATGTGATTTATGGGAGGGATTTGGACATTGGCAATGGCCCTCTTGAAATTGGGTAATCTCTTCATCCTTGTGTAGCTTGTTGGAGTAATATTATTAGCATCGAGAAATAATGCATACTTATTCTTAGGATTAGAAGCAGTTGGTTCTGAGCATGAAACATATTGAACATATGACAGACAGAGTATTCTTGATCTTTCTGAATTGCATTTTACTCTCATTTCCTGTTTTGAATTTAGAAAACGGATCTCATAGTTACTGTAAGTATTAGATTAGATTAGATTAGATTATTTGTGTTCCATTAACAATTTTCTTCAAAGAAGTTCTTCCAAATTTTCTGTAATTGTTTAGGTTTTAGGTTTAAATATCATTTTCCTCTCGTTTTAATTTGTCTCTGTAATTTTAAATCTTTAGATTGAACTACTTTAGTTGAACTTTATCCACG

Coding sequence (CDS)

ATGCAATTTGGAGCGCTGAACAAGGGCTCAGGTCTGCTATCACTTCAGCGCCAAACGTGTCTGATGACCATCACGAACATGGAGGATTTGAAGAAGAGGAAGCTGGAGGAGACCGTTGGCAACGGTGAATTTTCGTCGGTCGAACATTTGCGGTCTCTCCTCGAACCGCTTCCCAAGCCACAACTCGTCGATCTCCTTGCCAGACTAGGGTCCCAGTATCCTTCCATTGCAGAAGAAATAAAAAGTGTTGCCAGTGCAGATCCTGTCAATCGAAAGCTTTTTGTTCGTGGCTTGGCCTGGAATACCACTTCAGAAACATTGTGTGCTACGTTTAGCGTCCATGGCGAAATTGAAGAAGGAGCCGTTATCTATGACAAAACGACAGGGAAGTCTCGTGGATATGGTTTCATTACTTACAAGCATATGGAGTCAACTAAAGCTGCTTTAAAAGCACCTAGCAAAATTATTGAGGGTCGCATGGCTGTCTGCAATCTGGCTTGTGAGGGTCTAAGTGGATCAAGTACAACTCCAGATTTAGCACAGAGGAAGCTATACATTGGTGGGTTATCACCAGATATTACAAGTGAAATGTTGCTGAATTTCTTTGGAAGGTATGGTGATATAGAAGAAGGTTCGGTTGCCTATGATAAAGATACAAATGAATCACGAGGGTTCGGATTTGTTACATATACCACAGTCGAGGCTACAAAGAAGGCAATAGATGATCCAGACAAGACCTTTGGGGGAAGGAACATAATTGTGAAGCTCGCCGATTCACACAGGAACAAGATGATGCAGGCACAAGTACCCCCAGCTATTCCTTCTATGCCATACCCAGTAGCAGCAGCTGGATATCCTCAACCTGGAAAACCACACGGCGGTGTTGCCCCTGTTGGCTATGCATATCCCCCCCAAGCTCTTGCATCATATCATGCTTCATATCCTAGTCTGACGAAAGAAAGACGCTCCCGGACTCCACCTGATCACGCCTACTGGAATGGGAGGCTATCCATATTATATGGCGAAACAATAGATGTGATTTATGGGAGGGATTTGGACATTGGCAATGGCCCTCTTGAAATTGGGTAA

Protein sequence

MQFGALNKGSGLLSLQRQTCLMTITNMEDLKKRKLEETVGNGEFSSVEHLRSLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASADPVNRKLFVRGLAWNTTSETLCATFSVHGEIEEGAVIYDKTTGKSRGYGFITYKHMESTKAALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEMLLNFFGRYGDIEEGSVAYDKDTNESRGFGFVTYTTVEATKKAIDDPDKTFGGRNIIVKLADSHRNKMMQAQVPPAIPSMPYPVAAAGYPQPGKPHGGVAPVGYAYPPQALASYHASYPSLTKERRSRTPPDHAYWNGRLSILYGETIDVIYGRDLDIGNGPLEIG

Homology

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BLAST of CmoCh14G004320 vs. ExPASy Swiss-Prot
Match: Q9LKA4 (UBP1-associated protein 2C OS=Arabidopsis thaliana OX=3702 GN=UBA2C PE=2 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 5.6e-46
Identity = 101/242 (41.74%), Postives = 146/242 (60.33%), Query Frame = 0


Query: 27  MEDLKKRKLEE------TVGNGEFS----SVEHLRSLLEPLPKPQLVDLLARLGSQYPSI 86
           M+ +KKRKL+E      T G G       S +  R ++E     QL+DLL     ++P +
Sbjct: 1   MDMMKKRKLDENGNGLNTNGGGTIGPTRLSPQDARKIIERFTTDQLLDLLQEAIVRHPDV 60

Query: 87  AEEIKSVASADPVNRKLFVRGLAWNTTSETLCATFSVHGEIEEGAVIYDKTTGKSRGYGF 146
            E ++  A +D   RKLF+RGLA +TT+E L + FS +G++EE  VI DK TGKS+GYGF
Sbjct: 61  LESVRLTADSDISQRKLFIRGLAADTTTEGLRSLFSSYGDLEEAIVILDKVTGKSKGYGF 120

Query: 147 ITYKHMESTKAALKAPSKIIEGRMAVCNLACEGLSGS-STTPDLAQRKLYIGGLSPDITS 206
           +T+ H++    ALK PSK I+GR+ V  LA  G  G+ S   D++ RK+Y+  +  D+ +
Sbjct: 121 VTFMHVDGALLALKEPSKKIDGRVTVTQLAASGNQGTGSQIADISMRKIYVANVPFDMPA 180

Query: 207 EMLLNFFGRYGDIEEGSVAYDKDTNESRGFGFVTYTTVEATKKAIDDPDKTFGGRNIIVK 258
           + LLN F  YGD+EEG + +DK T +SRGF    Y T E  + A+ DP K   G+++  K
Sbjct: 181 DRLLNHFMAYGDVEEGPLGFDKVTGKSRGFALFVYKTAEGAQAALADPVKVIDGKHLNCK 240

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BLAST of CmoCh14G004320 vs. ExPASy Swiss-Prot
Match: O80678 (UBP1-associated protein 2B OS=Arabidopsis thaliana OX=3702 GN=UBA2B PE=2 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.4e-41
Identity = 91/237 (38.40%), Postives = 133/237 (56.12%), Query Frame = 0


Query: 40  GNGEFSSVEHLRSLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASADPVNRKLFVRGLA 99
           GN +    E +  LLEP  K QL+ LL     ++  +A  I+ VA  D V+RK+FV GL 
Sbjct: 77  GNEDDDEEEPIEDLLEPFSKDQLLILLKEAAERHRDVANRIRIVADEDLVHRKIFVHGLG 136

Query: 100 WNTTSETLCATFSVHGEIEEGAVIYDKTTGKSRGYGFITYKHMESTKAALKAPSKIIEGR 159
           W+T +++L   F  +GEIE+   + DK +G+S+GYGFI +K     + ALK P K I  R
Sbjct: 137 WDTKADSLIDAFKQYGEIEDCKCVVDKVSGQSKGYGFILFKSRSGARNALKQPQKKIGTR 196

Query: 160 MAVCNLACEG-LSGSST-------TPDLAQRKLYIGGLSPDITSEMLLNFFGRYGDIEEG 219
           M  C LA  G + G+          P+  QRK+Y+  +S DI  + LL FF R+G+IEEG
Sbjct: 197 MTACQLASIGPVQGNPVVAPAQHFNPENVQRKIYVSNVSADIDPQKLLEFFSRFGEIEEG 256

Query: 220 SVAYDKDTNESRGFGFVTYTTVEATKKAIDDPDKTFGGRNIIVKLADSHRNKMMQAQ 269
            +  DK T   +GF    Y ++E+ KKA+++P KTF G  +    A+    ++ Q Q
Sbjct: 257 PLGLDKATGRPKGFALFVYRSLESAKKALEEPHKTFEGHVLHCHKANDGPKQVKQHQ 313

[Close]

BLAST of CmoCh14G004320 vs. ExPASy Swiss-Prot
Match: Q9LES2 (UBP1-associated protein 2A OS=Arabidopsis thaliana OX=3702 GN=UBA2A PE=1 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 3.2e-41
Identity = 85/224 (37.95%), Postives = 125/224 (55.80%), Query Frame = 0


Query: 40  GNGEFSSVEHLRSLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASADPVNRKLFVRGLA 99
           GN E    E ++ LLEP  K Q++ LL     ++  +A  I+ VA  DPV+RK+FV GL 
Sbjct: 89  GNQEDDDDEPIQDLLEPFSKEQVLSLLKEAAEKHVDVANRIREVADEDPVHRKIFVHGLG 148

Query: 100 WNTTSETLCATFSVHGEIEEGAVIYDKTTGKSRGYGFITYKHMESTKAALKAPSKIIEGR 159
           W+T +ETL   F  +GEIE+   ++DK +GKS+GYGFI YK     + ALK P K I  R
Sbjct: 149 WDTKTETLIEAFKQYGEIEDCKAVFDKISGKSKGYGFILYKSRSGARNALKQPQKKIGSR 208

Query: 160 MAVCNLACEG--------------LSGSSTTPDLAQRKLYIGGLSPDITSEMLLNFFGRY 219
           M  C LA +G                   +  +  Q+K+Y+  +  ++  + LL FF ++
Sbjct: 209 MTACQLASKGPVFGGAPIAAAAVSAPAQHSNSEHTQKKIYVSNVGAELDPQKLLMFFSKF 268

Query: 220 GDIEEGSVAYDKDTNESRGFGFVTYTTVEATKKAIDDPDKTFGG 250
           G+IEEG +  DK T   +GF    Y + E+ K+A+++P KTF G
Sbjct: 269 GEIEEGPLGLDKYTGRPKGFCLFVYKSSESAKRALEEPHKTFEG 312

[Close]

BLAST of CmoCh14G004320 vs. ExPASy Swiss-Prot
Match: Q9LJ04 (RNA-binding protein P OS=Oryza sativa subsp. japonica OX=39947 GN=RBP-P PE=1 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.1e-38
Identity = 88/248 (35.48%), Postives = 130/248 (52.42%), Query Frame = 0


Query: 28  EDLKKRKLEETVGNGEFS------SVEHLRSLLEPLPKPQLVDLLARLGSQYPSIAEEIK 87
           E+++  + E+  G GE          + +++LL   PK QLV+LL+     +  +   + 
Sbjct: 87  EEVEVDEDEDGEGEGEEEEEAAERDADSIQALLNSFPKDQLVELLSAAALSHEDVLTAVH 146

Query: 88  SVASADPVNRKLFVRGLAWNTTSETLCATFSVHGEIEEGAVIYDKTTGKSRGYGFITYKH 147
             A ADP  RK+FV GL W+ T+ETL   FS +GEIE+  V+ D+ TGK +GYGFI +  
Sbjct: 147 RAADADPALRKIFVHGLGWDATAETLTEAFSAYGEIEDLRVVTDRATGKCKGYGFILFSR 206

Query: 148 MESTKAALKAPSKIIEGRMAVCNLACEG---LSGSSTTP-----------------DLAQ 207
               +AAL+ P K I  R   C LA  G     G +T P                 +  Q
Sbjct: 207 RSGARAALREPQKKIGNRTTACQLASVGPVPPGGMATNPAPAVAPAPAQLALPPVSEYTQ 266

Query: 208 RKLYIGGLSPDITSEMLLNFFGRYGDIEEGSVAYDKDTNESRGFGFVTYTTVEATKKAID 250
           RK+++  +  DI  + LL FF +YG+IEEG +  DK T + +GF    Y T+++ KKA+ 
Sbjct: 267 RKIFVSNVGADIDPQKLLQFFSKYGEIEEGPLGLDKVTGKPKGFALFVYKTLDSAKKALQ 326

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BLAST of CmoCh14G004320 vs. ExPASy Swiss-Prot
Match: Q9SHZ6 (UBP1-associated proteins 1A OS=Arabidopsis thaliana OX=3702 GN=UBA1A PE=1 SV=2)

HSP 1 Score: 109.4 bits (272), Expect = 8.7e-23
Identity = 59/131 (45.04%), Postives = 73/131 (55.73%), Query Frame = 0


Query: 48  EHLRSLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASADPVNRKLFVRGLAWNTTSETL 107
           E LR LL+P  K QLVDL+        SI   +   A  D  +RK+FV GL W TT ETL
Sbjct: 61  EELRELLQPYSKDQLVDLVCSASRIGSSIYSAVVEAADRDVTHRKIFVYGLPWETTRETL 120

Query: 108 CATFSVHGEIEEGAVIYDKTTGKSRGYGFITYKHMESTKAALKAPSKIIEGRMAVCNLAC 167
              F  +GEIEE  V+ DK TGK++G+GF+ +K  +  K ALK P K I  R A C LA 
Sbjct: 121 VGVFEGYGEIEECTVVIDKATGKAKGFGFVMFKTRKGAKEALKEPKKRILNRTATCQLAS 180

Query: 168 EGLSGSSTTPD 179
            G + S    D
Sbjct: 181 MGPAASGKGHD 191

[Close]

BLAST of CmoCh14G004320 vs. ExPASy TrEMBL
Match: A0A6J1F6L7 (UBP1-associated protein 2C-like OS=Cucurbita moschata OX=3662 GN=LOC111441349 PE=4 SV=1)

HSP 1 Score: 593.6 bits (1529), Expect = 5.6e-166
Identity = 298/302 (98.68%), Postives = 298/302 (98.68%), Query Frame = 0


Query: 22  MTITNMEDLKKRKLEETVGNGEFSSVEHLRSLLEPLPKPQLVDLLARLGSQYPSIAEEIK 81
           MTITNMEDLKKRKLEETVGNGEFSSVEHLRSLLEPLPKPQLVDLLARLGSQYPSIAEEIK
Sbjct: 1   MTITNMEDLKKRKLEETVGNGEFSSVEHLRSLLEPLPKPQLVDLLARLGSQYPSIAEEIK 60

Query: 82  SVASADPVNRKLFVRGLAWNTTSETLCATFSVHGEIEEGAVIYDKTTGKSRGYGFITYKH 141
           SVASADPVNRKLFVRGLAWNTTSETLCATFSVHGEIEEGAVIYDKTTGKSRGYGFITYKH
Sbjct: 61  SVASADPVNRKLFVRGLAWNTTSETLCATFSVHGEIEEGAVIYDKTTGKSRGYGFITYKH 120

Query: 142 MESTKAALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEMLLNF 201
           MESTKAALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEMLLNF
Sbjct: 121 MESTKAALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEMLLNF 180

Query: 202 FGRYGDIEEGSVAYDKDTNESRGFGFVTYTTVEATKKAIDDPDKTFGGRNIIVKLADSHR 261
           FGRYGDIEEGSVAYDKDTNESRGFGFVTYTTVEATKKAIDDPDKTFGGRNIIVKLADSHR
Sbjct: 181 FGRYGDIEEGSVAYDKDTNESRGFGFVTYTTVEATKKAIDDPDKTFGGRNIIVKLADSHR 240

Query: 262 NKMMQAQVPPAIPSMPYPVAAAGYPQPGKPHGGVAPVGYAYPPQALASYHASYPSLTKER 321
           NKMMQAQVPPAIPSMPYPVAAAGYPQPGKPHGGVAPVGYAYPPQALASYHASYPSLT   
Sbjct: 241 NKMMQAQVPPAIPSMPYPVAAAGYPQPGKPHGGVAPVGYAYPPQALASYHASYPSLTSAH 300

Query: 322 RS 324
            S
Sbjct: 301 AS 302

[Close]

BLAST of CmoCh14G004320 vs. ExPASy TrEMBL
Match: A0A6J1J4I3 (UBP1-associated protein 2C-like OS=Cucurbita maxima OX=3661 GN=LOC111481690 PE=4 SV=1)

HSP 1 Score: 578.9 bits (1491), Expect = 1.4e-161
Identity = 291/297 (97.98%), Postives = 291/297 (97.98%), Query Frame = 0


Query: 27  MEDLKKRKLEETVGNGEFSSVEHLRSLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA 86
           MEDLKKRKLE TVGNGEFSSVEHLRSLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA
Sbjct: 1   MEDLKKRKLEATVGNGEFSSVEHLRSLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA 60

Query: 87  DPVNRKLFVRGLAWNTTSETLCATFSVHGEIEEGAVIYDKTTGKSRGYGFITYKHMESTK 146
           DPVNRKLFVRGLAWNTTSETLCATFSVHGEIEEGAVIYDKTTGKSRGYGFITYKHMESTK
Sbjct: 61  DPVNRKLFVRGLAWNTTSETLCATFSVHGEIEEGAVIYDKTTGKSRGYGFITYKHMESTK 120

Query: 147 AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEMLLNFFGRYG 206
           AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEMLLNFFGRYG
Sbjct: 121 AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEMLLNFFGRYG 180

Query: 207 DIEEGSVAYDKDTNESRGFGFVTYTTVEATKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 266
           DIEEGSVAYDKDTNESRGFGFVTYTTVEATKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ
Sbjct: 181 DIEEGSVAYDKDTNESRGFGFVTYTTVEATKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 240

Query: 267 AQVPPAIPSMPYPVAAAGYPQPGKPHGGVAPVGYAYPPQALASYHASYPSLTKERRS 324
           AQVPPAIPSMPYPVAAAGYPQPGKPHGGVAPVGYAYPPQALASYHASYPS T    S
Sbjct: 241 AQVPPAIPSMPYPVAAAGYPQPGKPHGGVAPVGYAYPPQALASYHASYPSPTSAHAS 297

[Close]

BLAST of CmoCh14G004320 vs. ExPASy TrEMBL
Match: A0A5A7TKB5 (UBP1-associated protein 2C-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005530 PE=4 SV=1)

HSP 1 Score: 552.4 bits (1422), Expect = 1.4e-153
Identity = 283/297 (95.29%), Postives = 284/297 (95.62%), Query Frame = 0


Query: 27  MEDLKKRKLEETVGNGEFSSVEHLRSLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA 86
           MEDLKKRKLEETVGNGEFSSVEHLRSLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA
Sbjct: 1   MEDLKKRKLEETVGNGEFSSVEHLRSLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA 60

Query: 87  DPVNRKLFVRGLAWNTTSETLCATFSVHGEIEEGAVIYDKTTGKSRGYGFITYKHMESTK 146
           DPVNRKLFVRGLAWNTTSETLCA FSVHGEIEEGAVIYDK TGKSRGYGFITYKHMESTK
Sbjct: 61  DPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTK 120

Query: 147 AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEMLLNFFGRYG 206
           AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSE+LLNFFGRYG
Sbjct: 121 AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEVLLNFFGRYG 180

Query: 207 DIEEGSVAYDKDTNESRGFGFVTYTTVEATKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 266
           DIEEGSVAYDKDTNESRGFGFVTYTTVEA KKAIDDPDKTFGGRNIIVKLADSHRNKMMQ
Sbjct: 181 DIEEGSVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 240

Query: 267 AQVPPAIPSMPYPVAAAGYPQPGKPHGGVAPVGYAYPPQALASYHASYPSLTKERRS 324
           AQV PAIPSMPYPV AAGYPQPGKPHGGVAPVGYAY PQAL SY ASYPS T    S
Sbjct: 241 AQVSPAIPSMPYPV-AAGYPQPGKPHGGVAPVGYAY-PQALGSYPASYPSPTTAHAS 295

[Close]

BLAST of CmoCh14G004320 vs. ExPASy TrEMBL
Match: A0A1S3B7X8 (UBP1-associated protein 2C-like OS=Cucumis melo OX=3656 GN=LOC103486777 PE=4 SV=1)

HSP 1 Score: 552.4 bits (1422), Expect = 1.4e-153
Identity = 283/297 (95.29%), Postives = 284/297 (95.62%), Query Frame = 0


Query: 27  MEDLKKRKLEETVGNGEFSSVEHLRSLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA 86
           MEDLKKRKLEETVGNGEFSSVEHLRSLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA
Sbjct: 1   MEDLKKRKLEETVGNGEFSSVEHLRSLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA 60

Query: 87  DPVNRKLFVRGLAWNTTSETLCATFSVHGEIEEGAVIYDKTTGKSRGYGFITYKHMESTK 146
           DPVNRKLFVRGLAWNTTSETLCA FSVHGEIEEGAVIYDK TGKSRGYGFITYKHMESTK
Sbjct: 61  DPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTK 120

Query: 147 AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEMLLNFFGRYG 206
           AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSE+LLNFFGRYG
Sbjct: 121 AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEVLLNFFGRYG 180

Query: 207 DIEEGSVAYDKDTNESRGFGFVTYTTVEATKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 266
           DIEEGSVAYDKDTNESRGFGFVTYTTVEA KKAIDDPDKTFGGRNIIVKLADSHRNKMMQ
Sbjct: 181 DIEEGSVAYDKDTNESRGFGFVTYTTVEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 240

Query: 267 AQVPPAIPSMPYPVAAAGYPQPGKPHGGVAPVGYAYPPQALASYHASYPSLTKERRS 324
           AQV PAIPSMPYPV AAGYPQPGKPHGGVAPVGYAY PQAL SY ASYPS T    S
Sbjct: 241 AQVSPAIPSMPYPV-AAGYPQPGKPHGGVAPVGYAY-PQALGSYPASYPSPTTAHAS 295

[Close]

BLAST of CmoCh14G004320 vs. ExPASy TrEMBL
Match: A0A0A0LEH0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G809410 PE=4 SV=1)

HSP 1 Score: 546.2 bits (1406), Expect = 1.0e-151
Identity = 279/297 (93.94%), Postives = 282/297 (94.95%), Query Frame = 0


Query: 27  MEDLKKRKLEETVGNGEFSSVEHLRSLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA 86
           MEDLKKRKLEETVGN EFSS+EHLR+LLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA
Sbjct: 1   MEDLKKRKLEETVGNAEFSSLEHLRTLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASA 60

Query: 87  DPVNRKLFVRGLAWNTTSETLCATFSVHGEIEEGAVIYDKTTGKSRGYGFITYKHMESTK 146
           DPVNRKLFVRGLAWNTTSETLCA FSVHGEIEEGAVIYDK TGKSRGYGFITYKHMESTK
Sbjct: 61  DPVNRKLFVRGLAWNTTSETLCAAFSVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTK 120

Query: 147 AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEMLLNFFGRYG 206
           AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSE+LLNFFGRYG
Sbjct: 121 AALKAPSKIIEGRMAVCNLACEGLSGSSTTPDLAQRKLYIGGLSPDITSEVLLNFFGRYG 180

Query: 207 DIEEGSVAYDKDTNESRGFGFVTYTTVEATKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 266
           DIEEGSVAYDKDTNESRGFGFVTYTT EA KKAIDDPDKTFGGRNIIVKLADSHRNKMMQ
Sbjct: 181 DIEEGSVAYDKDTNESRGFGFVTYTTAEAAKKAIDDPDKTFGGRNIIVKLADSHRNKMMQ 240

Query: 267 AQVPPAIPSMPYPVAAAGYPQPGKPHGGVAPVGYAYPPQALASYHASYPSLTKERRS 324
           AQV PAIPSMPYPV AAGYPQPGKPHGGVAPVGYAY PQAL SY ASYPS T    S
Sbjct: 241 AQVSPAIPSMPYPV-AAGYPQPGKPHGGVAPVGYAY-PQALGSYPASYPSPTTAHAS 295

[Close]

BLAST of CmoCh14G004320 vs. TAIR 10
Match: AT3G15010.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 186.4 bits (472), Expect = 4.0e-47
Identity = 101/242 (41.74%), Postives = 146/242 (60.33%), Query Frame = 0


Query: 27  MEDLKKRKLEE------TVGNGEFS----SVEHLRSLLEPLPKPQLVDLLARLGSQYPSI 86
           M+ +KKRKL+E      T G G       S +  R ++E     QL+DLL     ++P +
Sbjct: 1   MDMMKKRKLDENGNGLNTNGGGTIGPTRLSPQDARKIIERFTTDQLLDLLQEAIVRHPDV 60

Query: 87  AEEIKSVASADPVNRKLFVRGLAWNTTSETLCATFSVHGEIEEGAVIYDKTTGKSRGYGF 146
            E ++  A +D   RKLF+RGLA +TT+E L + FS +G++EE  VI DK TGKS+GYGF
Sbjct: 61  LESVRLTADSDISQRKLFIRGLAADTTTEGLRSLFSSYGDLEEAIVILDKVTGKSKGYGF 120

Query: 147 ITYKHMESTKAALKAPSKIIEGRMAVCNLACEGLSGS-STTPDLAQRKLYIGGLSPDITS 206
           +T+ H++    ALK PSK I+GR+ V  LA  G  G+ S   D++ RK+Y+  +  D+ +
Sbjct: 121 VTFMHVDGALLALKEPSKKIDGRVTVTQLAASGNQGTGSQIADISMRKIYVANVPFDMPA 180

Query: 207 EMLLNFFGRYGDIEEGSVAYDKDTNESRGFGFVTYTTVEATKKAIDDPDKTFGGRNIIVK 258
           + LLN F  YGD+EEG + +DK T +SRGF    Y T E  + A+ DP K   G+++  K
Sbjct: 181 DRLLNHFMAYGDVEEGPLGFDKVTGKSRGFALFVYKTAEGAQAALADPVKVIDGKHLNCK 240

[Close]

BLAST of CmoCh14G004320 vs. TAIR 10
Match: AT3G15010.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 186.4 bits (472), Expect = 4.0e-47
Identity = 101/242 (41.74%), Postives = 146/242 (60.33%), Query Frame = 0


Query: 27  MEDLKKRKLEE------TVGNGEFS----SVEHLRSLLEPLPKPQLVDLLARLGSQYPSI 86
           M+ +KKRKL+E      T G G       S +  R ++E     QL+DLL     ++P +
Sbjct: 1   MDMMKKRKLDENGNGLNTNGGGTIGPTRLSPQDARKIIERFTTDQLLDLLQEAIVRHPDV 60

Query: 87  AEEIKSVASADPVNRKLFVRGLAWNTTSETLCATFSVHGEIEEGAVIYDKTTGKSRGYGF 146
            E ++  A +D   RKLF+RGLA +TT+E L + FS +G++EE  VI DK TGKS+GYGF
Sbjct: 61  LESVRLTADSDISQRKLFIRGLAADTTTEGLRSLFSSYGDLEEAIVILDKVTGKSKGYGF 120

Query: 147 ITYKHMESTKAALKAPSKIIEGRMAVCNLACEGLSGS-STTPDLAQRKLYIGGLSPDITS 206
           +T+ H++    ALK PSK I+GR+ V  LA  G  G+ S   D++ RK+Y+  +  D+ +
Sbjct: 121 VTFMHVDGALLALKEPSKKIDGRVTVTQLAASGNQGTGSQIADISMRKIYVANVPFDMPA 180

Query: 207 EMLLNFFGRYGDIEEGSVAYDKDTNESRGFGFVTYTTVEATKKAIDDPDKTFGGRNIIVK 258
           + LLN F  YGD+EEG + +DK T +SRGF    Y T E  + A+ DP K   G+++  K
Sbjct: 181 DRLLNHFMAYGDVEEGPLGFDKVTGKSRGFALFVYKTAEGAQAALADPVKVIDGKHLNCK 240

[Close]

BLAST of CmoCh14G004320 vs. TAIR 10
Match: AT2G41060.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 171.8 bits (434), Expect = 1.0e-42
Identity = 91/237 (38.40%), Postives = 133/237 (56.12%), Query Frame = 0


Query: 40  GNGEFSSVEHLRSLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASADPVNRKLFVRGLA 99
           GN +    E +  LLEP  K QL+ LL     ++  +A  I+ VA  D V+RK+FV GL 
Sbjct: 77  GNEDDDEEEPIEDLLEPFSKDQLLILLKEAAERHRDVANRIRIVADEDLVHRKIFVHGLG 136

Query: 100 WNTTSETLCATFSVHGEIEEGAVIYDKTTGKSRGYGFITYKHMESTKAALKAPSKIIEGR 159
           W+T +++L   F  +GEIE+   + DK +G+S+GYGFI +K     + ALK P K I  R
Sbjct: 137 WDTKADSLIDAFKQYGEIEDCKCVVDKVSGQSKGYGFILFKSRSGARNALKQPQKKIGTR 196

Query: 160 MAVCNLACEG-LSGSST-------TPDLAQRKLYIGGLSPDITSEMLLNFFGRYGDIEEG 219
           M  C LA  G + G+          P+  QRK+Y+  +S DI  + LL FF R+G+IEEG
Sbjct: 197 MTACQLASIGPVQGNPVVAPAQHFNPENVQRKIYVSNVSADIDPQKLLEFFSRFGEIEEG 256

Query: 220 SVAYDKDTNESRGFGFVTYTTVEATKKAIDDPDKTFGGRNIIVKLADSHRNKMMQAQ 269
            +  DK T   +GF    Y ++E+ KKA+++P KTF G  +    A+    ++ Q Q
Sbjct: 257 PLGLDKATGRPKGFALFVYRSLESAKKALEEPHKTFEGHVLHCHKANDGPKQVKQHQ 313

[Close]

BLAST of CmoCh14G004320 vs. TAIR 10
Match: AT2G41060.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 171.8 bits (434), Expect = 1.0e-42
Identity = 91/237 (38.40%), Postives = 133/237 (56.12%), Query Frame = 0


Query: 40  GNGEFSSVEHLRSLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASADPVNRKLFVRGLA 99
           GN +    E +  LLEP  K QL+ LL     ++  +A  I+ VA  D V+RK+FV GL 
Sbjct: 77  GNEDDDEEEPIEDLLEPFSKDQLLILLKEAAERHRDVANRIRIVADEDLVHRKIFVHGLG 136

Query: 100 WNTTSETLCATFSVHGEIEEGAVIYDKTTGKSRGYGFITYKHMESTKAALKAPSKIIEGR 159
           W+T +++L   F  +GEIE+   + DK +G+S+GYGFI +K     + ALK P K I  R
Sbjct: 137 WDTKADSLIDAFKQYGEIEDCKCVVDKVSGQSKGYGFILFKSRSGARNALKQPQKKIGTR 196

Query: 160 MAVCNLACEG-LSGSST-------TPDLAQRKLYIGGLSPDITSEMLLNFFGRYGDIEEG 219
           M  C LA  G + G+          P+  QRK+Y+  +S DI  + LL FF R+G+IEEG
Sbjct: 197 MTACQLASIGPVQGNPVVAPAQHFNPENVQRKIYVSNVSADIDPQKLLEFFSRFGEIEEG 256

Query: 220 SVAYDKDTNESRGFGFVTYTTVEATKKAIDDPDKTFGGRNIIVKLADSHRNKMMQAQ 269
            +  DK T   +GF    Y ++E+ KKA+++P KTF G  +    A+    ++ Q Q
Sbjct: 257 PLGLDKATGRPKGFALFVYRSLESAKKALEEPHKTFEGHVLHCHKANDGPKQVKQHQ 313

[Close]

BLAST of CmoCh14G004320 vs. TAIR 10
Match: AT3G56860.3 (UBP1-associated protein 2A )

HSP 1 Score: 170.6 bits (431), Expect = 2.3e-42
Identity = 85/224 (37.95%), Postives = 125/224 (55.80%), Query Frame = 0


Query: 40  GNGEFSSVEHLRSLLEPLPKPQLVDLLARLGSQYPSIAEEIKSVASADPVNRKLFVRGLA 99
           GN E    E ++ LLEP  K Q++ LL     ++  +A  I+ VA  DPV+RK+FV GL 
Sbjct: 89  GNQEDDDDEPIQDLLEPFSKEQVLSLLKEAAEKHVDVANRIREVADEDPVHRKIFVHGLG 148

Query: 100 WNTTSETLCATFSVHGEIEEGAVIYDKTTGKSRGYGFITYKHMESTKAALKAPSKIIEGR 159
           W+T +ETL   F  +GEIE+   ++DK +GKS+GYGFI YK     + ALK P K I  R
Sbjct: 149 WDTKTETLIEAFKQYGEIEDCKAVFDKISGKSKGYGFILYKSRSGARNALKQPQKKIGSR 208

Query: 160 MAVCNLACEG--------------LSGSSTTPDLAQRKLYIGGLSPDITSEMLLNFFGRY 219
           M  C LA +G                   +  +  Q+K+Y+  +  ++  + LL FF ++
Sbjct: 209 MTACQLASKGPVFGGAPIAAAAVSAPAQHSNSEHTQKKIYVSNVGAELDPQKLLMFFSKF 268

Query: 220 GDIEEGSVAYDKDTNESRGFGFVTYTTVEATKKAIDDPDKTFGG 250
           G+IEEG +  DK T   +GF    Y + E+ K+A+++P KTF G
Sbjct: 269 GEIEEGPLGLDKYTGRPKGFCLFVYKSSESAKRALEEPHKTFEG 312

The following BLAST results are available for this feature:

BLAST of CmoCh14G004320 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LKA4	5.6e-46	41.74	UBP1-associated protein 2C OS=Arabidopsis thaliana OX=3702 GN=UBA2C PE=2 SV=1	[more]
O80678	1.4e-41	38.40	UBP1-associated protein 2B OS=Arabidopsis thaliana OX=3702 GN=UBA2B PE=2 SV=1	[more]
Q9LES2	3.2e-41	37.95	UBP1-associated protein 2A OS=Arabidopsis thaliana OX=3702 GN=UBA2A PE=1 SV=1	[more]
Q9LJ04	1.1e-38	35.48	RNA-binding protein P OS=Oryza sativa subsp. japonica OX=39947 GN=RBP-P PE=1 SV=...	[more]
Q9SHZ6	8.7e-23	45.04	UBP1-associated proteins 1A OS=Arabidopsis thaliana OX=3702 GN=UBA1A PE=1 SV=2	[more]

BLAST of CmoCh14G004320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F6L7	5.6e-166	98.68	UBP1-associated protein 2C-like OS=Cucurbita moschata OX=3662 GN=LOC111441349 PE...	[more]
A0A6J1J4I3	1.4e-161	97.98	UBP1-associated protein 2C-like OS=Cucurbita maxima OX=3661 GN=LOC111481690 PE=4...	[more]
A0A5A7TKB5	1.4e-153	95.29	UBP1-associated protein 2C-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3B7X8	1.4e-153	95.29	UBP1-associated protein 2C-like OS=Cucumis melo OX=3656 GN=LOC103486777 PE=4 SV=...	[more]
A0A0A0LEH0	1.0e-151	93.94	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G809410 PE=4 SV=1	[more]

BLAST of CmoCh14G004320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15010.1	4.0e-47	41.74	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G15010.2	4.0e-47	41.74	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G41060.1	1.0e-42	38.40	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G41060.2	1.0e-42	38.40	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G56860.3	2.3e-42	37.95	UBP1-associated protein 2A	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 92..164 e-value: 1.1E-18 score: 78.1 coord: 183..255 e-value: 3.7E-23 score: 92.9
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 184..252 e-value: 2.5E-16 score: 59.2 coord: 93..159 e-value: 7.1E-13 score: 48.2
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 182..259 score: 16.824184
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 91..182 score: 13.771269
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 70..173 e-value: 3.2E-20 score: 74.5
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 174..269 e-value: 1.7E-23 score: 85.2
None	No IPR available	PANTHER	PTHR48027:SF13	UBP1-ASSOCIATED PROTEIN 2C-LIKE	coord: 42..318
None	No IPR available	PANTHER	PTHR48027	HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED	coord: 42..318
None	No IPR available	CDD	cd12384	RRM_RBM24_RBM38_like	coord: 91..166 e-value: 2.73791E-34 score: 119.257
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 79..168
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 175..266

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh14G004320.1	CmoCh14G004320.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding