Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGCGATTATGAAGAAACGGGCTCTGTTGCAGAACTCAGCGCGCCCGGCGGCGATGGCGGTGCACGCAGCTTCACACGCCATTTCGAAGCCCAAACCGAAGATTCGTATCATTCACATCTTCGCACCGGAGATTATTAAAACCGACGTCGCTAATTTCCGCGAGCTCGTTCAGAGACTGACTGGAAAGCCGGCGACGGCGGAGGAGAAGATTGTTCCGCCTCAAATTCCTCCGGTAGCAGTGGCGGATATTGCGACGGCGTTTGATCATCGGAAGTCGGAGATGGGCGGCGGGGAGTGTCGGAGAGTGAAGACGGAAGATCGGGAAGAGGAGGAGGAGGAGGAGGAGGAAGAAGAAGAAGAAGAAGAGGCGTTGAGCGACGTCGTTGGGTTGTGGAACGACGTCGTTGGGTTCGAAGGGTTTATTGAAGAATTGGGTGAAATTCCGCTTCTTCCTTCTGCTCACCAAATAATGCATGGTTTTGAAGAAACTCAATTTGCTTGA
mRNA sequence
ATGGAGGCGATTATGAAGAAACGGGCTCTGTTGCAGAACTCAGCGCGCCCGGCGGCGATGGCGGTGCACGCAGCTTCACACGCCATTTCGAAGCCCAAACCGAAGATTCGTATCATTCACATCTTCGCACCGGAGATTATTAAAACCGACGTCGCTAATTTCCGCGAGCTCGTTCAGAGACTGACTGGAAAGCCGGCGACGGCGGAGGAGAAGATTGTTCCGCCTCAAATTCCTCCGGTAGCAGTGGCGGATATTGCGACGGCGTTTGATCATCGGAAGTCGGAGATGGGCGGCGGGGAGTGTCGGAGAGTGAAGACGGAAGATCGGGAAGAGGAGGAGGAGGAGGAGGAGGAAGAAGAAGAAGAAGAAGAGGCGTTGAGCGACGTCGTTGGGTTGTGGAACGACGTCGTTGGGTTCGAAGGGTTTATTGAAGAATTGGGTGAAATTCCGCTTCTTCCTTCTGCTCACCAAATAATGCATGGTTTTGAAGAAACTCAATTTGCTTGA
Coding sequence (CDS)
ATGGAGGCGATTATGAAGAAACGGGCTCTGTTGCAGAACTCAGCGCGCCCGGCGGCGATGGCGGTGCACGCAGCTTCACACGCCATTTCGAAGCCCAAACCGAAGATTCGTATCATTCACATCTTCGCACCGGAGATTATTAAAACCGACGTCGCTAATTTCCGCGAGCTCGTTCAGAGACTGACTGGAAAGCCGGCGACGGCGGAGGAGAAGATTGTTCCGCCTCAAATTCCTCCGGTAGCAGTGGCGGATATTGCGACGGCGTTTGATCATCGGAAGTCGGAGATGGGCGGCGGGGAGTGTCGGAGAGTGAAGACGGAAGATCGGGAAGAGGAGGAGGAGGAGGAGGAGGAAGAAGAAGAAGAAGAAGAGGCGTTGAGCGACGTCGTTGGGTTGTGGAACGACGTCGTTGGGTTCGAAGGGTTTATTGAAGAATTGGGTGAAATTCCGCTTCTTCCTTCTGCTCACCAAATAATGCATGGTTTTGAAGAAACTCAATTTGCTTGA
Protein sequence
MEAIMKKRALLQNSARPAAMAVHAASHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQRLTGKPATAEEKIVPPQIPPVAVADIATAFDHRKSEMGGGECRRVKTEDREEEEEEEEEEEEEEEALSDVVGLWNDVVGFEGFIEELGEIPLLPSAHQIMHGFEETQFA
Homology
BLAST of CmoCh14G004240 vs. ExPASy Swiss-Prot
Match:
Q9M2P8 (VQ motif-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=VQ25 PE=3 SV=1)
HSP 1 Score: 76.6 bits (187), Expect = 2.9e-13
Identity = 64/147 (43.54%), Postives = 79/147 (53.74%), Query Frame = 0
Query: 18 AAMAVHAASHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQRLTGKPATAEEKIVPPQI 77
+++AVH S++I+K KPKIRIIHIFAPEIIKTDVANFRELVQ LTGKP P+
Sbjct: 14 SSIAVHKQSYSITKSKPKIRIIHIFAPEIIKTDVANFRELVQSLTGKPDDQRTSKAKPR- 73
Query: 78 PPVAVADIATAFDHRKSEMGGGECRRVKTEDREEEEEEEEEEEEEEEALS---------- 137
D+ HR+ + + TE E E ++E E LS
Sbjct: 74 -----RDMHRL--HRQVQ------DMINTEKLREPEHCDQEFCLNAEELSMTWNGNNGAG 133
Query: 138 -DVVGLWNDVVGFEGFIEELGEIPLLP 154
G N + FEGFI+ELGE P LP
Sbjct: 134 ESSGGFLNGLGDFEGFIQELGEFPYLP 146
BLAST of CmoCh14G004240 vs. ExPASy Swiss-Prot
Match:
O48522 (VQ motif-containing protein 17 OS=Arabidopsis thaliana OX=3702 GN=VQ17 PE=2 SV=1)
HSP 1 Score: 65.5 bits (158), Expect = 6.7e-10
Identity = 57/151 (37.75%), Postives = 78/151 (51.66%), Query Frame = 0
Query: 4 IMKKRALLQNSARPAAMAVHAASHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQRLTG 63
+ K+R+L +A+H S ++K KPKIRIIHIFAPEIIKTDVANFRE+VQ LTG
Sbjct: 8 VQKRRSL-------PTIAMHKQSRTLTKSKPKIRIIHIFAPEIIKTDVANFREIVQNLTG 67
Query: 64 KPATAEEKIVPPQIPPVAVADIATAFDHRK-SEMGGGECRRVKTEDREEEEEEEEEEEEE 123
K + P Q + DH + +M + +++ EE
Sbjct: 68 KQDHHHHDL-PHQKGLKRNPRSRRSHDHHEVHDMNKSHGFCINSDEEEEGMVSMTWNGNG 127
Query: 124 EEALSDVVGLWNDVVGFEGFIEELGEIPLLP 154
+E+ G N + +GFI+ELGE P LP
Sbjct: 128 DESSG---GFLNGLGDLDGFIQELGEFPYLP 147
BLAST of CmoCh14G004240 vs. ExPASy Swiss-Prot
Match:
O64868 (VQ motif-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=VQ18 PE=3 SV=1)
HSP 1 Score: 58.5 bits (140), Expect = 8.2e-08
Identity = 57/157 (36.31%), Postives = 74/157 (47.13%), Query Frame = 0
Query: 20 MAVHAASHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQRLTGKPATAEEK-------- 79
++++ S ISK KPKIRIIHIFAPE+IKTDV NFR LVQ LTGKPA E K
Sbjct: 17 VSMNRNSQVISKIKPKIRIIHIFAPEVIKTDVKNFRSLVQSLTGKPAPGEAKTGKKRAKS 76
Query: 80 -IVPPQIPPVAVADIATAFDHRKSEMGGGECRRVKTEDREEEEEEEEEEEEEEEALSDVV 139
I PQ P V D DH+ G + + +EE ++
Sbjct: 77 RITTPQEP---VCD-----DHQPVNRLSGFTGLLANGGNHQVKEEWGSGDQSTSNT---- 136
Query: 140 GLWNDVVGFEGFIEELGE-----IPLLPSAHQIMHGF 163
N EG I+++GE P+ S+ + GF
Sbjct: 137 ---NTYFDLEGLIQDVGEDYFSSFPMRSSSSSQVEGF 158
BLAST of CmoCh14G004240 vs. ExPASy TrEMBL
Match:
A0A6J1F598 (VQ motif-containing protein 25-like OS=Cucurbita moschata OX=3662 GN=LOC111442255 PE=4 SV=1)
HSP 1 Score: 316.2 bits (809), Expect = 8.1e-83
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0
Query: 1 MEAIMKKRALLQNSARPAAMAVHAASHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQR 60
MEAIMKKRALLQNSARPAAMAVHAASHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQR
Sbjct: 1 MEAIMKKRALLQNSARPAAMAVHAASHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQR 60
Query: 61 LTGKPATAEEKIVPPQIPPVAVADIATAFDHRKSEMGGGECRRVKTEDREEEEEEEEEEE 120
LTGKPATAEEKIVPPQIPPVAVADIATAFDHRKSEMGGGECRRVKTEDREEEEEEEEEEE
Sbjct: 61 LTGKPATAEEKIVPPQIPPVAVADIATAFDHRKSEMGGGECRRVKTEDREEEEEEEEEEE 120
Query: 121 EEEEALSDVVGLWNDVVGFEGFIEELGEIPLLPSAHQIMHGFEETQFA 169
EEEEALSDVVGLWNDVVGFEGFIEELGEIPLLPSAHQIMHGFEETQFA
Sbjct: 121 EEEEALSDVVGLWNDVVGFEGFIEELGEIPLLPSAHQIMHGFEETQFA 168
BLAST of CmoCh14G004240 vs. ExPASy TrEMBL
Match:
A0A6J1IYE1 (VQ motif-containing protein 25-like OS=Cucurbita maxima OX=3661 GN=LOC111481765 PE=4 SV=1)
HSP 1 Score: 305.1 bits (780), Expect = 1.9e-79
Identity = 163/170 (95.88%), Postives = 165/170 (97.06%), Query Frame = 0
Query: 1 MEAIMKKRALLQNSARPAAMAVHAASHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQR 60
MEAIMKKRALLQNSARP AMA+H ASHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQR
Sbjct: 1 MEAIMKKRALLQNSARPGAMALHTASHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQR 60
Query: 61 LTGKPATAEEKIVPPQIPPVAVADIATAFDHRKSEMGGGECRRVKTEDR--EEEEEEEEE 120
LTGKPATAEEKIVPPQIPP AVAD+ATAFDHRKSEMGGGECRRVKTEDR EEEEEEEEE
Sbjct: 61 LTGKPATAEEKIVPPQIPPAAVADVATAFDHRKSEMGGGECRRVKTEDREEEEEEEEEEE 120
Query: 121 EEEEEEALSDVVGLWNDVVGFEGFIEELGEIPLLPSAHQIMHGFEETQFA 169
EEEEEEALSDVVGLWNDVVGFEGFIEELGEIPLLPSAHQIMHGFEETQFA
Sbjct: 121 EEEEEEALSDVVGLWNDVVGFEGFIEELGEIPLLPSAHQIMHGFEETQFA 170
BLAST of CmoCh14G004240 vs. ExPASy TrEMBL
Match:
A0A5A7TRB0 (VQ motif-containing protein 25-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005450 PE=4 SV=1)
HSP 1 Score: 201.1 bits (510), Expect = 3.8e-48
Identity = 123/184 (66.85%), Postives = 140/184 (76.09%), Query Frame = 0
Query: 1 MEAIMKKRA----LLQNSARPAAMAVHAASHAISKPKPKIRIIHIFAPEIIKTDVANFRE 60
M+AI+K + LL S RP+ M +H+ASHAISKPKPKIRIIHIFAPEIIKTDVANFRE
Sbjct: 1 MDAILKNQRQRPHLLPTSPRPSTMPLHSASHAISKPKPKIRIIHIFAPEIIKTDVANFRE 60
Query: 61 LVQRLTGKP---ATAEEKIVPPQIPPVAVADIATAFDHRKSEMGGGECRR-VKTEDREEE 120
LVQRLTGKP T E+KI+PPQIP A AFD+RK+EM CRR VK ED ++E
Sbjct: 61 LVQRLTGKPEAITTQEDKILPPQIP------AAAAFDNRKTEM--VSCRRMVKKEDEDQE 120
Query: 121 ----EEEEEEE-----EEEEEALSDVVGLWNDVVGFEGFIEELGEIPLLPSAHQIMHGFE 168
EEEEEEE EEEEE L +VVG+WNDVVGFEGFI+ELGE PL+PSAHQIMHGFE
Sbjct: 121 EDYDEEEEEEEGEGEGEEEEEMLDEVVGMWNDVVGFEGFIQELGEFPLIPSAHQIMHGFE 176
BLAST of CmoCh14G004240 vs. ExPASy TrEMBL
Match:
A0A1S3B6P9 (VQ motif-containing protein 25-like OS=Cucumis melo OX=3656 GN=LOC103486769 PE=4 SV=1)
HSP 1 Score: 201.1 bits (510), Expect = 3.8e-48
Identity = 123/184 (66.85%), Postives = 140/184 (76.09%), Query Frame = 0
Query: 1 MEAIMKKRA----LLQNSARPAAMAVHAASHAISKPKPKIRIIHIFAPEIIKTDVANFRE 60
M+AI+K + LL S RP+ M +H+ASHAISKPKPKIRIIHIFAPEIIKTDVANFRE
Sbjct: 1 MDAILKNQRQRPHLLPTSPRPSTMPLHSASHAISKPKPKIRIIHIFAPEIIKTDVANFRE 60
Query: 61 LVQRLTGKP---ATAEEKIVPPQIPPVAVADIATAFDHRKSEMGGGECRR-VKTEDREEE 120
LVQRLTGKP T E+KI+PPQIP A AFD+RK+EM CRR VK ED ++E
Sbjct: 61 LVQRLTGKPEAITTQEDKILPPQIP------AAAAFDNRKTEM--VSCRRMVKKEDEDQE 120
Query: 121 ----EEEEEEE-----EEEEEALSDVVGLWNDVVGFEGFIEELGEIPLLPSAHQIMHGFE 168
EEEEEEE EEEEE L +VVG+WNDVVGFEGFI+ELGE PL+PSAHQIMHGFE
Sbjct: 121 EDYDEEEEEEEGEGEGEEEEEMLDEVVGMWNDVVGFEGFIQELGEFPLIPSAHQIMHGFE 176
BLAST of CmoCh14G004240 vs. ExPASy TrEMBL
Match:
A0A0A0LBB1 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G807350 PE=4 SV=1)
HSP 1 Score: 171.4 bits (433), Expect = 3.2e-39
Identity = 104/157 (66.24%), Postives = 123/157 (78.34%), Query Frame = 0
Query: 1 MEAIMKKRA-----LLQNSARPAAMAVHAASHAISKPKPKIRIIHIFAPEIIKTDVANFR 60
MEAI+ K+ LL SARP++MA+H+ASH ISKPKPKIRIIHIFAPEIIKTDVANFR
Sbjct: 1 MEAILIKKQRQRPHLLPTSARPSSMALHSASHPISKPKPKIRIIHIFAPEIIKTDVANFR 60
Query: 61 ELVQRLTGKP-ATAEEKIVPPQIPPVAVADIATAFDHRKSE-MGGGECRRVKTEDREEEE 120
ELVQRLTGKP AT + KI+PP+IPP A AFD+RK+E + G CRR ++E+
Sbjct: 61 ELVQRLTGKPEATEDGKILPPEIPP------AAAFDNRKTEIVSGVGCRRRMV---KKED 120
Query: 121 EEEEEEEEEEEALSDVVGLWNDVVGFEGFIEELGEIP 151
E +EE+EEEEE L DVVG+WNDVVGFEGFI+ELGE P
Sbjct: 121 EYQEEDEEEEEMLEDVVGMWNDVVGFEGFIQELGEFP 148
BLAST of CmoCh14G004240 vs. TAIR 10
Match:
AT3G58000.1 (VQ motif-containing protein )
HSP 1 Score: 76.6 bits (187), Expect = 2.1e-14
Identity = 64/147 (43.54%), Postives = 79/147 (53.74%), Query Frame = 0
Query: 18 AAMAVHAASHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQRLTGKPATAEEKIVPPQI 77
+++AVH S++I+K KPKIRIIHIFAPEIIKTDVANFRELVQ LTGKP P+
Sbjct: 14 SSIAVHKQSYSITKSKPKIRIIHIFAPEIIKTDVANFRELVQSLTGKPDDQRTSKAKPR- 73
Query: 78 PPVAVADIATAFDHRKSEMGGGECRRVKTEDREEEEEEEEEEEEEEEALS---------- 137
D+ HR+ + + TE E E ++E E LS
Sbjct: 74 -----RDMHRL--HRQVQ------DMINTEKLREPEHCDQEFCLNAEELSMTWNGNNGAG 133
Query: 138 -DVVGLWNDVVGFEGFIEELGEIPLLP 154
G N + FEGFI+ELGE P LP
Sbjct: 134 ESSGGFLNGLGDFEGFIQELGEFPYLP 146
BLAST of CmoCh14G004240 vs. TAIR 10
Match:
AT2G42140.1 (VQ motif-containing protein )
HSP 1 Score: 65.5 bits (158), Expect = 4.8e-11
Identity = 57/151 (37.75%), Postives = 78/151 (51.66%), Query Frame = 0
Query: 4 IMKKRALLQNSARPAAMAVHAASHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQRLTG 63
+ K+R+L +A+H S ++K KPKIRIIHIFAPEIIKTDVANFRE+VQ LTG
Sbjct: 8 VQKRRSL-------PTIAMHKQSRTLTKSKPKIRIIHIFAPEIIKTDVANFREIVQNLTG 67
Query: 64 KPATAEEKIVPPQIPPVAVADIATAFDHRK-SEMGGGECRRVKTEDREEEEEEEEEEEEE 123
K + P Q + DH + +M + +++ EE
Sbjct: 68 KQDHHHHDL-PHQKGLKRNPRSRRSHDHHEVHDMNKSHGFCINSDEEEEGMVSMTWNGNG 127
Query: 124 EEALSDVVGLWNDVVGFEGFIEELGEIPLLP 154
+E+ G N + +GFI+ELGE P LP
Sbjct: 128 DESSG---GFLNGLGDLDGFIQELGEFPYLP 147
BLAST of CmoCh14G004240 vs. TAIR 10
Match:
AT3G60090.1 (VQ motif-containing protein )
HSP 1 Score: 63.5 bits (153), Expect = 1.8e-10
Identity = 39/77 (50.65%), Postives = 47/77 (61.04%), Query Frame = 0
Query: 26 SHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQRLTGKP----ATAEEKI------VPP 85
S I+K KPKIRIIHIFAPEII TDV NFR LVQ LTGKP +++KI PP
Sbjct: 35 SQIITKIKPKIRIIHIFAPEIINTDVKNFRTLVQSLTGKPEITKTGSKKKITNTNFPAPP 94
Query: 86 QIPPVAVADIATAFDHR 93
+P + + D+R
Sbjct: 95 GLPQDSGQEHTAELDNR 111
BLAST of CmoCh14G004240 vs. TAIR 10
Match:
AT2G44340.1 (VQ motif-containing protein )
HSP 1 Score: 58.5 bits (140), Expect = 5.8e-09
Identity = 57/157 (36.31%), Postives = 74/157 (47.13%), Query Frame = 0
Query: 20 MAVHAASHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQRLTGKPATAEEK-------- 79
++++ S ISK KPKIRIIHIFAPE+IKTDV NFR LVQ LTGKPA E K
Sbjct: 17 VSMNRNSQVISKIKPKIRIIHIFAPEVIKTDVKNFRSLVQSLTGKPAPGEAKTGKKRAKS 76
Query: 80 -IVPPQIPPVAVADIATAFDHRKSEMGGGECRRVKTEDREEEEEEEEEEEEEEEALSDVV 139
I PQ P V D DH+ G + + +EE ++
Sbjct: 77 RITTPQEP---VCD-----DHQPVNRLSGFTGLLANGGNHQVKEEWGSGDQSTSNT---- 136
Query: 140 GLWNDVVGFEGFIEELGE-----IPLLPSAHQIMHGF 163
N EG I+++GE P+ S+ + GF
Sbjct: 137 ---NTYFDLEGLIQDVGEDYFSSFPMRSSSSSQVEGF 158
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9M2P8 | 2.9e-13 | 43.54 | VQ motif-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=VQ25 PE=3 SV=1 | [more] |
O48522 | 6.7e-10 | 37.75 | VQ motif-containing protein 17 OS=Arabidopsis thaliana OX=3702 GN=VQ17 PE=2 SV=1 | [more] |
O64868 | 8.2e-08 | 36.31 | VQ motif-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=VQ18 PE=3 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1F598 | 8.1e-83 | 100.00 | VQ motif-containing protein 25-like OS=Cucurbita moschata OX=3662 GN=LOC11144225... | [more] |
A0A6J1IYE1 | 1.9e-79 | 95.88 | VQ motif-containing protein 25-like OS=Cucurbita maxima OX=3661 GN=LOC111481765 ... | [more] |
A0A5A7TRB0 | 3.8e-48 | 66.85 | VQ motif-containing protein 25-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5... | [more] |
A0A1S3B6P9 | 3.8e-48 | 66.85 | VQ motif-containing protein 25-like OS=Cucumis melo OX=3656 GN=LOC103486769 PE=4... | [more] |
A0A0A0LBB1 | 3.2e-39 | 66.24 | VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G807350 PE=4 SV=... | [more] |