
CmoCh14G004030 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACAAGAGTAACCCTGAACGAGAAACTCATGATTTCATGAACGTTGAGTCTTTCTCTCAACTACCCTTTATCCGGCCTGCGCCAAAAGAAAAGGGCATTAGACTTTTTGGGATAGAATTTGGAAGCCAAAATGTTGTAGCGGCGTCTGCGTCTTCTATTGAGGAATCGGAGTCAGATGACACGGTTATTGCATGCGAAGATGCTAAAGAAAACAACAACGACAACAACAACAGCGGAGGAGAAAGTAGCCGGAGATTTGAATGCCATTATTGTTGTAGGAATTTCCCTACTTCACAAGCCTTAGGAGGGCACCAAAACGCCCACAAAAGAGAGCGCCAACATGCAAAAAGGGCTCACCTTCAGTCTAATGCAGCCGCTATGGTTCATGGAATTGGAGCCTTCTCCGACGCTGCCCATGTGTATGGGCTCATGAACTACCAGCGACTAGCCGGCGCCGCTCCCTCCGGCCTGCAGGTTAATAATTACCCTTCTTGGAATAGAAATTCACCCACCGCCGCCACCGCTTCCGCCACCAGATTTTATGGCAGCCCTGGTGGGCAGTATTCTCCGGCAGCCACCACGGCGCCTATAAACGGGAGTCCGTTAGCGATGTGGAGAATCTCAGCCGTACAAAATAATGTACCGGCGTTTGGTAGCCGGGAACGGACGTCCATGCACCCGTTGCCACTGTTTTCAGGAGATGAGATGATGAAGGGCGGCAGCACTGCCGTGGGTGGCGGTGGGTCCGGCGGGTCTCATCAGACCCGGTTTGTATACGAGGCAAAAACGGCGGCGGACCAAGTGAGTTTGGATCTTCATCTGTAA ATGGACAAGAGTAACCCTGAACGAGAAACTCATGATTTCATGAACGTTGAGTCTTTCTCTCAACTACCCTTTATCCGGCCTGCGCCAAAAGAAAAGGGCATTAGACTTTTTGGGATAGAATTTGGAAGCCAAAATGTTGTAGCGGCGTCTGCGTCTTCTATTGAGGAATCGGAGTCAGATGACACGGTTATTGCATGCGAAGATGCTAAAGAAAACAACAACGACAACAACAACAGCGGAGGAGAAAGTAGCCGGAGATTTGAATGCCATTATTGTTGTAGGAATTTCCCTACTTCACAAGCCTTAGGAGGGCACCAAAACGCCCACAAAAGAGAGCGCCAACATGCAAAAAGGGCTCACCTTCAGTCTAATGCAGCCGCTATGGTTCATGGAATTGGAGCCTTCTCCGACGCTGCCCATGTGTATGGGCTCATGAACTACCAGCGACTAGCCGGCGCCGCTCCCTCCGGCCTGCAGGTTAATAATTACCCTTCTTGGAATAGAAATTCACCCACCGCCGCCACCGCTTCCGCCACCAGATTTTATGGCAGCCCTGGTGGGCAGTATTCTCCGGCAGCCACCACGGCGCCTATAAACGGGAGTCCGTTAGCGATGTGGAGAATCTCAGCCGTACAAAATAATGTACCGGCGTTTGGTAGCCGGGAACGGACGTCCATGCACCCGTTGCCACTGTTTTCAGGAGATGAGATGATGAAGGGCGGCAGCACTGCCGTGGGTGGCGGTGGGTCCGGCGGGTCTCATCAGACCCGGTTTGTATACGAGGCAAAAACGGCGGCGGACCAAGTGAGTTTGGATCTTCATCTGTAA ATGGACAAGAGTAACCCTGAACGAGAAACTCATGATTTCATGAACGTTGAGTCTTTCTCTCAACTACCCTTTATCCGGCCTGCGCCAAAAGAAAAGGGCATTAGACTTTTTGGGATAGAATTTGGAAGCCAAAATGTTGTAGCGGCGTCTGCGTCTTCTATTGAGGAATCGGAGTCAGATGACACGGTTATTGCATGCGAAGATGCTAAAGAAAACAACAACGACAACAACAACAGCGGAGGAGAAAGTAGCCGGAGATTTGAATGCCATTATTGTTGTAGGAATTTCCCTACTTCACAAGCCTTAGGAGGGCACCAAAACGCCCACAAAAGAGAGCGCCAACATGCAAAAAGGGCTCACCTTCAGTCTAATGCAGCCGCTATGGTTCATGGAATTGGAGCCTTCTCCGACGCTGCCCATGTGTATGGGCTCATGAACTACCAGCGACTAGCCGGCGCCGCTCCCTCCGGCCTGCAGGTTAATAATTACCCTTCTTGGAATAGAAATTCACCCACCGCCGCCACCGCTTCCGCCACCAGATTTTATGGCAGCCCTGGTGGGCAGTATTCTCCGGCAGCCACCACGGCGCCTATAAACGGGAGTCCGTTAGCGATGTGGAGAATCTCAGCCGTACAAAATAATGTACCGGCGTTTGGTAGCCGGGAACGGACGTCCATGCACCCGTTGCCACTGTTTTCAGGAGATGAGATGATGAAGGGCGGCAGCACTGCCGTGGGTGGCGGTGGGTCCGGCGGGTCTCATCAGACCCGGTTTGTATACGAGGCAAAAACGGCGGCGGACCAAGTGAGTTTGGATCTTCATCTGTAA MDKSNPERETHDFMNVESFSQLPFIRPAPKEKGIRLFGIEFGSQNVVAASASSIEESESDDTVIACEDAKENNNDNNNSGGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSNAAAMVHGIGAFSDAAHVYGLMNYQRLAGAAPSGLQVNNYPSWNRNSPTAATASATRFYGSPGGQYSPAATTAPINGSPLAMWRISAVQNNVPAFGSRERTSMHPLPLFSGDEMMKGGSTAVGGGGSGGSHQTRFVYEAKTAADQVSLDLHL Homology
BLAST of CmoCh14G004030 vs. ExPASy Swiss-Prot
Match: P93751 (Zinc finger protein 8 OS=Arabidopsis thaliana OX=3702 GN=ZFP8 PE=1 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 1.3e-31 Identity = 98/226 (43.36%), Postives = 124/226 (54.87%), Query Frame = 0
BLAST of CmoCh14G004030 vs. ExPASy Swiss-Prot
Match: Q84WI0 (Zinc finger protein GIS OS=Arabidopsis thaliana OX=3702 GN=GIS PE=1 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 1.2e-27 Identity = 105/287 (36.59%), Postives = 137/287 (47.74%), Query Frame = 0
BLAST of CmoCh14G004030 vs. ExPASy Swiss-Prot
Match: Q9FG05 (Zinc finger protein GIS2 OS=Arabidopsis thaliana OX=3702 GN=GIS2 PE=2 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 8.7e-23 Identity = 68/124 (54.84%), Postives = 77/124 (62.10%), Query Frame = 0
BLAST of CmoCh14G004030 vs. ExPASy Swiss-Prot
Match: Q9C9H1 (Zinc finger protein GIS3 OS=Arabidopsis thaliana OX=3702 GN=GIS3 PE=1 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 1.4e-09 Identity = 43/106 (40.57%), Postives = 54/106 (50.94%), Query Frame = 0
BLAST of CmoCh14G004030 vs. ExPASy Swiss-Prot
Match: Q39265 (Zinc finger protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZFP6 PE=2 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 3.2e-09 Identity = 28/44 (63.64%), Postives = 33/44 (75.00%), Query Frame = 0
BLAST of CmoCh14G004030 vs. ExPASy TrEMBL
Match: A0A6J1F2B3 (zinc finger protein GIS2-like OS=Cucurbita moschata OX=3662 GN=LOC111441502 PE=4 SV=1) HSP 1 Score: 546.6 bits (1407), Expect = 6.0e-152 Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0
BLAST of CmoCh14G004030 vs. ExPASy TrEMBL
Match: A0A6J1J692 (zinc finger protein 8-like OS=Cucurbita maxima OX=3661 GN=LOC111481724 PE=4 SV=1) HSP 1 Score: 516.9 bits (1330), Expect = 5.1e-143 Identity = 266/275 (96.73%), Postives = 269/275 (97.82%), Query Frame = 0
BLAST of CmoCh14G004030 vs. ExPASy TrEMBL
Match: A0A5A7TJW6 (Zinc finger protein 8-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005210 PE=4 SV=1) HSP 1 Score: 442.6 bits (1137), Expect = 1.2e-120 Identity = 240/285 (84.21%), Postives = 248/285 (87.02%), Query Frame = 0
BLAST of CmoCh14G004030 vs. ExPASy TrEMBL
Match: A0A1S3B727 (zinc finger protein 8-like OS=Cucumis melo OX=3656 GN=LOC103486743 PE=4 SV=1) HSP 1 Score: 442.6 bits (1137), Expect = 1.2e-120 Identity = 240/285 (84.21%), Postives = 248/285 (87.02%), Query Frame = 0
BLAST of CmoCh14G004030 vs. ExPASy TrEMBL
Match: A0A6J1I822 (zinc finger protein 8-like OS=Cucurbita maxima OX=3661 GN=LOC111470038 PE=4 SV=1) HSP 1 Score: 433.0 bits (1112), Expect = 9.7e-118 Identity = 226/275 (82.18%), Postives = 243/275 (88.36%), Query Frame = 0
BLAST of CmoCh14G004030 vs. TAIR 10
Match: AT2G41940.1 (zinc finger protein 8 ) HSP 1 Score: 138.3 bits (347), Expect = 9.5e-33 Identity = 98/226 (43.36%), Postives = 124/226 (54.87%), Query Frame = 0
BLAST of CmoCh14G004030 vs. TAIR 10
Match: AT3G58070.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 125.2 bits (313), Expect = 8.3e-29 Identity = 105/287 (36.59%), Postives = 137/287 (47.74%), Query Frame = 0
BLAST of CmoCh14G004030 vs. TAIR 10
Match: AT5G06650.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 109.0 bits (271), Expect = 6.1e-24 Identity = 68/124 (54.84%), Postives = 77/124 (62.10%), Query Frame = 0
BLAST of CmoCh14G004030 vs. TAIR 10
Match: AT1G68360.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 65.1 bits (157), Expect = 1.0e-10 Identity = 43/106 (40.57%), Postives = 54/106 (50.94%), Query Frame = 0
BLAST of CmoCh14G004030 vs. TAIR 10
Match: AT1G67030.1 (zinc finger protein 6 ) HSP 1 Score: 63.9 bits (154), Expect = 2.3e-10 Identity = 28/44 (63.64%), Postives = 33/44 (75.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|